HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-APR-12 4EIU TITLE CRYSTAL STRUCTURE OF A DUF3823 FAMILY PROTEIN (BACUNI_03093) FROM TITLE 2 BACTEROIDES UNIFORMIS ATCC 8492 AT 1.90 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES UNIFORMIS; SOURCE 3 ORGANISM_TAXID: 411479; SOURCE 4 STRAIN: ATCC 8492; SOURCE 5 GENE: BACUNI_03093; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF12866 FAMILY PROTEIN, DUF3823, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4EIU 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 4EIU 1 JRNL REVDAT 3 15-NOV-17 4EIU 1 REMARK REVDAT 2 24-DEC-14 4EIU 1 TITLE REVDAT 1 30-MAY-12 4EIU 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BACUNI_03093) JRNL TITL 2 FROM BACTEROIDES UNIFORMIS ATCC 8492 AT 1.90 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 32242 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1634 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2009 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1911 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 97 REMARK 3 SOLVENT ATOMS : 142 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.74000 REMARK 3 B22 (A**2) : 1.74000 REMARK 3 B33 (A**2) : -3.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.168 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2058 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1460 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2759 ; 1.675 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3524 ; 0.941 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 247 ; 7.091 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;39.489 ;24.100 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 319 ;11.566 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;15.966 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 292 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2256 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 424 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 134 REMARK 3 RESIDUE RANGE : A 135 A 271 REMARK 3 ORIGIN FOR THE GROUP (A): 17.2963 34.9767 19.7742 REMARK 3 T TENSOR REMARK 3 T11: 0.0330 T22: 0.0775 REMARK 3 T33: 0.0358 T12: 0.0138 REMARK 3 T13: -0.0200 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 2.1775 L22: 2.6842 REMARK 3 L33: 4.5264 L12: -0.5931 REMARK 3 L13: -0.6425 L23: 1.7956 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: -0.3164 S13: 0.0190 REMARK 3 S21: 0.2912 S22: 0.2090 S23: -0.1940 REMARK 3 S31: 0.1661 S32: 0.4283 S33: -0.1936 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5.PEG200 FRAGMENTS (PEG AND PGE) FROM THE CRYSTALLIZATION REMARK 3 SOLUTION HAVE BEEN MODELED IN THE SOLVENT STRUCTURE. REMARK 4 REMARK 4 4EIU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000071672. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32310 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 29.661 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09500 REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.90 REMARK 200 R MERGE FOR SHELL (I) : 0.97200 REMARK 200 R SYM FOR SHELL (I) : 0.97200 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50.0% POLYETHYLENE GLYCOL 200, 0.1M REMARK 280 CHES PH 9.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.18250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.94750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.94750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.09125 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.94750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.94750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 84.27375 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.94750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.94750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.09125 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.94750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.94750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 84.27375 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.18250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 516 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ILE A 24 REMARK 465 ASP A 25 REMARK 465 ASN A 26 REMARK 465 TYR A 27 REMARK 465 GLU A 28 REMARK 465 GLU A 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 87 CD CE NZ REMARK 470 SER A 148 OG REMARK 470 GLU A 165 CG CD OE1 OE2 REMARK 470 LYS A 223 CE NZ REMARK 470 LYS A 238 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 157 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 258 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG A 259 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 73 150.35 -49.97 REMARK 500 LYS A 87 58.98 -114.96 REMARK 500 VAL A 197 129.91 -37.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 312 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 417957 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 24-271) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4EIU A 24 271 UNP A7V680 A7V680_BACUN 24 271 SEQADV 4EIU GLY A 0 UNP A7V680 EXPRESSION TAG SEQRES 1 A 249 GLY ILE ASP ASN TYR GLU GLU PRO SER GLU THR ILE TRP SEQRES 2 A 249 GLY GLU VAL VAL ASP GLU ALA THR GLY LYS ARG VAL LEU SEQRES 3 A 249 THR ASP GLN GLY SER GLU GLY ILE ARG VAL ARG LEU THR SEQRES 4 A 249 GLU LEU SER TRP GLY ASP ASN VAL GLN HIS ASN PRO ASP SEQRES 5 A 249 PHE TYR CYS MSE MSE ASP GLY THR PHE GLN ASN THR LYS SEQRES 6 A 249 ILE PHE LYS GLY GLU TYR ASN VAL ARG ILE ASP GLY PRO SEQRES 7 A 249 PHE ILE PRO LEU VAL ARG GLU ASN THR ASP GLY THR LEU SEQRES 8 A 249 LEU HIS ASP GLY SER VAL ASN THR GLU ILE SER GLY THR SEQRES 9 A 249 THR LYS VAL LYS PHE GLU VAL GLN PRO PHE LEU ASN VAL SEQRES 10 A 249 GLU PHE VAL GLY ASN PRO GLN VAL SER ASN GLY VAL ILE SEQRES 11 A 249 LYS ALA GLN VAL ARG VAL THR ARG GLY VAL SER ASP GLU SEQRES 12 A 249 VAL PHE ARG GLU LYS ILE GLN PRO MSE GLY ASN TRP LYS SEQRES 13 A 249 ASP GLU TYR LEU ASN VAL THR ASP ILE GLN PHE PHE VAL SEQRES 14 A 249 SER TYR SER ASN THR VAL GLY TYR ARG ALA ARG ASP GLU SEQRES 15 A 249 ARG TRP SER SER SER ILE ASN TYR GLU GLY LYS SER PHE SEQRES 16 A 249 GLU GLY LEU LEU GLY LYS GLU VAL THR ILE GLN SER ASN SEQRES 17 A 249 GLY ASN VAL PRO SER GLY ARG LYS VAL PHE VAL ARG ALA SEQRES 18 A 249 ALA ALA ARG ILE ASN TYR ASP THR PRO VAL GLY SER GLY SEQRES 19 A 249 THR ARG ARG TRP ASN TYR SER GLU PRO MSE GLU VAL LEU SEQRES 20 A 249 ILE PRO MODRES 4EIU MSE A 78 MET SELENOMETHIONINE MODRES 4EIU MSE A 79 MET SELENOMETHIONINE MODRES 4EIU MSE A 174 MET SELENOMETHIONINE MODRES 4EIU MSE A 266 MET SELENOMETHIONINE HET MSE A 78 8 HET MSE A 79 8 HET MSE A 174 8 HET MSE A 266 8 HET PEG A 300 7 HET PEG A 301 7 HET PEG A 302 7 HET PEG A 303 7 HET PEG A 304 7 HET PEG A 305 7 HET PEG A 306 7 HET PEG A 307 7 HET PEG A 308 7 HET PEG A 309 7 HET PEG A 310 7 HET PGE A 311 10 HET PGE A 312 10 HETNAM MSE SELENOMETHIONINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 2 PEG 11(C4 H10 O3) FORMUL 13 PGE 2(C6 H14 O4) FORMUL 15 HOH *142(H2 O) HELIX 1 1 SER A 163 GLN A 172 1 10 HELIX 2 2 PRO A 173 GLY A 175 5 3 HELIX 3 3 LYS A 178 LEU A 182 5 5 HELIX 4 4 PHE A 217 LEU A 221 5 5 SHEET 1 A 3 THR A 82 ILE A 88 0 SHEET 2 A 3 GLU A 32 ASP A 40 -1 N GLU A 32 O ILE A 88 SHEET 3 A 3 THR A 126 VAL A 133 1 O VAL A 133 N VAL A 39 SHEET 1 B 4 PHE A 75 TYR A 76 0 SHEET 2 B 4 ARG A 57 GLU A 62 -1 N VAL A 58 O PHE A 75 SHEET 3 B 4 GLY A 91 ASP A 98 -1 O ASN A 94 N THR A 61 SHEET 4 B 4 VAL A 119 ILE A 123 -1 O VAL A 119 N VAL A 95 SHEET 1 C 2 VAL A 105 GLU A 107 0 SHEET 2 C 2 LEU A 113 ASP A 116 -1 O LEU A 114 N ARG A 106 SHEET 1 D 3 LEU A 137 PHE A 141 0 SHEET 2 D 3 VAL A 151 ARG A 160 -1 O ARG A 157 N GLU A 140 SHEET 3 D 3 GLN A 146 SER A 148 -1 N GLN A 146 O LYS A 153 SHEET 1 E 3 LEU A 137 PHE A 141 0 SHEET 2 E 3 VAL A 151 ARG A 160 -1 O ARG A 157 N GLU A 140 SHEET 3 E 3 GLU A 224 GLN A 228 -1 O VAL A 225 N VAL A 156 SHEET 1 F 4 SER A 208 ASN A 211 0 SHEET 2 F 4 VAL A 184 SER A 192 -1 N PHE A 189 O SER A 208 SHEET 3 F 4 LYS A 238 ILE A 247 -1 O PHE A 240 N SER A 192 SHEET 4 F 4 ASN A 261 TYR A 262 -1 O ASN A 261 N ALA A 245 SHEET 1 G 4 SER A 208 ASN A 211 0 SHEET 2 G 4 VAL A 184 SER A 192 -1 N PHE A 189 O SER A 208 SHEET 3 G 4 LYS A 238 ILE A 247 -1 O PHE A 240 N SER A 192 SHEET 4 G 4 MSE A 266 LEU A 269 -1 O VAL A 268 N VAL A 239 LINK C CYS A 77 N MSE A 78 1555 1555 1.31 LINK C MSE A 78 N MSE A 79 1555 1555 1.31 LINK C MSE A 79 N ASP A 80 1555 1555 1.34 LINK C PRO A 173 N MSE A 174 1555 1555 1.33 LINK C MSE A 174 N GLY A 175 1555 1555 1.33 LINK C PRO A 265 N MSE A 266 1555 1555 1.33 LINK C MSE A 266 N GLU A 267 1555 1555 1.33 CISPEP 1 THR A 251 PRO A 252 0 -11.02 SITE 1 AC1 4 THR A 61 ASN A 68 PGE A 311 PGE A 312 SITE 1 AC2 5 PHE A 75 TYR A 76 THR A 112 ARG A 200 SITE 2 AC2 5 HOH A 467 SITE 1 AC3 8 ASN A 108 ILE A 171 MSE A 174 GLY A 175 SITE 2 AC3 8 TYR A 249 VAL A 253 HOH A 404 HOH A 465 SITE 1 AC4 5 ARG A 96 VAL A 105 GLU A 107 HOH A 426 SITE 2 AC4 5 HOH A 469 SITE 1 AC5 3 ALA A 42 ARG A 160 SER A 163 SITE 1 AC6 5 GLU A 54 ARG A 246 TRP A 260 HOH A 444 SITE 2 AC6 5 HOH A 450 SITE 1 AC7 2 GLN A 70 GLY A 219 SITE 1 AC8 4 SER A 209 THR A 226 ILE A 227 GLN A 228 SITE 1 AC9 2 GLU A 62 LYS A 90 SITE 1 BC1 4 ASN A 176 LYS A 178 GLU A 180 TYR A 181 SITE 1 BC2 5 ARG A 106 LYS A 170 ASN A 195 THR A 196 SITE 2 BC2 5 HOH A 483 SITE 1 BC3 6 SER A 64 TRP A 65 ASN A 68 LYS A 128 SITE 2 BC3 6 PEG A 300 HOH A 507 SITE 1 BC4 4 ASP A 116 SER A 118 ASN A 120 PEG A 300 CRYST1 83.895 83.895 112.365 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011920 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011920 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008900 0.00000