data_4EQK # _entry.id 4EQK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4EQK pdb_00004eqk 10.2210/pdb4eqk/pdb RCSB RCSB071948 ? ? WWPDB D_1000071948 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4ENF . unspecified PDB 4ES5 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4EQK _pdbx_database_status.recvd_initial_deposition_date 2012-04-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Meng, G.' 1 'Liu, Y.' 2 'Zheng, X.' 3 # _citation.id primary _citation.title ;Structural and functional characterization of K339T substitution identified in the PB2 subunit cap-binding pocket of influenza A virus ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 288 _citation.page_first 11013 _citation.page_last 11023 _citation.year 2013 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23436652 _citation.pdbx_database_id_DOI 10.1074/jbc.M112.392878 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, Y.' 1 ? primary 'Qin, K.' 2 ? primary 'Meng, G.' 3 ? primary 'Zhang, J.' 4 ? primary 'Zhou, J.' 5 ? primary 'Zhao, G.' 6 ? primary 'Luo, M.' 7 ? primary 'Zheng, X.' 8 ? # _cell.entry_id 4EQK _cell.length_a 55.379 _cell.length_b 70.151 _cell.length_c 93.941 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4EQK _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Polymerase basic protein 2' 19303.443 1 ? ? 'CAP-BINDING DOMAIN, RESIDUES 318-483' ? 2 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 3 non-polymer syn "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" 539.223 1 ? ? ? ? 4 water nat water 18.015 79 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNA-directed RNA polymerase subunit P3' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMRISSSFSFGGFTFKRTSGSSIKREEELLTGNLQTLKIRVHEGYEEFTMVGKRATAILRKATRRLVQLIVSGRDEQS VAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEHIDNVMGMIGVLPDMTPSTEM SMRGIRVSKM ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMRISSSFSFGGFTFKRTSGSSIKREEELLTGNLQTLKIRVHEGYEEFTMVGKRATAILRKATRRLVQLIVSGRDEQS VAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEHIDNVMGMIGVLPDMTPSTEM SMRGIRVSKM ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ARG n 1 6 ILE n 1 7 SER n 1 8 SER n 1 9 SER n 1 10 PHE n 1 11 SER n 1 12 PHE n 1 13 GLY n 1 14 GLY n 1 15 PHE n 1 16 THR n 1 17 PHE n 1 18 LYS n 1 19 ARG n 1 20 THR n 1 21 SER n 1 22 GLY n 1 23 SER n 1 24 SER n 1 25 ILE n 1 26 LYS n 1 27 ARG n 1 28 GLU n 1 29 GLU n 1 30 GLU n 1 31 LEU n 1 32 LEU n 1 33 THR n 1 34 GLY n 1 35 ASN n 1 36 LEU n 1 37 GLN n 1 38 THR n 1 39 LEU n 1 40 LYS n 1 41 ILE n 1 42 ARG n 1 43 VAL n 1 44 HIS n 1 45 GLU n 1 46 GLY n 1 47 TYR n 1 48 GLU n 1 49 GLU n 1 50 PHE n 1 51 THR n 1 52 MET n 1 53 VAL n 1 54 GLY n 1 55 LYS n 1 56 ARG n 1 57 ALA n 1 58 THR n 1 59 ALA n 1 60 ILE n 1 61 LEU n 1 62 ARG n 1 63 LYS n 1 64 ALA n 1 65 THR n 1 66 ARG n 1 67 ARG n 1 68 LEU n 1 69 VAL n 1 70 GLN n 1 71 LEU n 1 72 ILE n 1 73 VAL n 1 74 SER n 1 75 GLY n 1 76 ARG n 1 77 ASP n 1 78 GLU n 1 79 GLN n 1 80 SER n 1 81 VAL n 1 82 ALA n 1 83 GLU n 1 84 ALA n 1 85 ILE n 1 86 ILE n 1 87 VAL n 1 88 ALA n 1 89 MET n 1 90 VAL n 1 91 PHE n 1 92 SER n 1 93 GLN n 1 94 GLU n 1 95 ASP n 1 96 CYS n 1 97 MET n 1 98 ILE n 1 99 LYS n 1 100 ALA n 1 101 VAL n 1 102 ARG n 1 103 GLY n 1 104 ASP n 1 105 LEU n 1 106 ASN n 1 107 PHE n 1 108 VAL n 1 109 ASN n 1 110 ARG n 1 111 ALA n 1 112 ASN n 1 113 GLN n 1 114 ARG n 1 115 LEU n 1 116 ASN n 1 117 PRO n 1 118 MET n 1 119 HIS n 1 120 GLN n 1 121 LEU n 1 122 LEU n 1 123 ARG n 1 124 HIS n 1 125 PHE n 1 126 GLN n 1 127 LYS n 1 128 ASP n 1 129 ALA n 1 130 LYS n 1 131 VAL n 1 132 LEU n 1 133 PHE n 1 134 GLN n 1 135 ASN n 1 136 TRP n 1 137 GLY n 1 138 ILE n 1 139 GLU n 1 140 HIS n 1 141 ILE n 1 142 ASP n 1 143 ASN n 1 144 VAL n 1 145 MET n 1 146 GLY n 1 147 MET n 1 148 ILE n 1 149 GLY n 1 150 VAL n 1 151 LEU n 1 152 PRO n 1 153 ASP n 1 154 MET n 1 155 THR n 1 156 PRO n 1 157 SER n 1 158 THR n 1 159 GLU n 1 160 MET n 1 161 SER n 1 162 MET n 1 163 ARG n 1 164 GLY n 1 165 ILE n 1 166 ARG n 1 167 VAL n 1 168 SER n 1 169 LYS n 1 170 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PB2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'A/Hong Kong/1/1968 H3N2' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Influenza A virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 506350 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PB2_I68A4 _struct_ref.pdbx_db_accession Q91MB1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RISSSFSFGGFTFKRTSGSSIKREEELLTGNLQTLKIRVHEGYEEFTMVGKRATAILRKATRRLVQLIVSGRDEQSVAEA IIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEHIDNVMGMIGVLPDMTPSTEMSMRG IRVSKM ; _struct_ref.pdbx_align_begin 318 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4EQK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q91MB1 _struct_ref_seq.db_align_beg 318 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 483 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 318 _struct_ref_seq.pdbx_auth_seq_align_end 483 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4EQK GLY A 1 ? UNP Q91MB1 ? ? 'expression tag' 314 1 1 4EQK SER A 2 ? UNP Q91MB1 ? ? 'expression tag' 315 2 1 4EQK HIS A 3 ? UNP Q91MB1 ? ? 'expression tag' 316 3 1 4EQK MET A 4 ? UNP Q91MB1 ? ? 'expression tag' 317 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MGT non-polymer n "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" ? 'C11 H20 N5 O14 P3' 539.223 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4EQK _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_percent_sol 47.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '0.2M lithium nitrate, 0.1M Tris-HCl pH 8.0, 18% PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2010-05-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRF BEAMLINE BL17U' _diffrn_source.pdbx_synchrotron_site SSRF _diffrn_source.pdbx_synchrotron_beamline BL17U _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 4EQK _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.95 _reflns.number_obs 12525 _reflns.number_all 12525 _reflns.percent_possible_obs 91.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 11.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4EQK _refine.ls_number_reflns_obs 11879 _refine.ls_number_reflns_all 12491 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.26 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 91.48 _refine.ls_R_factor_obs 0.18656 _refine.ls_R_factor_all 0.2276 _refine.ls_R_factor_R_work 0.18349 _refine.ls_R_factor_R_free 0.24627 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 612 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 43.353 _refine.aniso_B[1][1] -0.23 _refine.aniso_B[2][2] 0.18 _refine.aniso_B[3][3] 0.05 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2VQZ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.173 _refine.overall_SU_ML 0.124 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.559 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1293 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1409 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 28.26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.022 0.022 ? 1349 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.258 1.985 ? 1814 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.800 5.000 ? 162 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 32.079 22.951 ? 61 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 17.847 15.000 ? 257 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 16.735 15.000 ? 14 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.161 0.200 ? 201 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.011 0.020 ? 980 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.664 1.500 ? 808 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.703 2.000 ? 1298 ? 'X-RAY DIFFRACTION' r_scbond_it 3.973 3.000 ? 541 ? 'X-RAY DIFFRACTION' r_scangle_it 6.111 4.500 ? 516 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr 2.588 3.000 ? 1349 ? 'X-RAY DIFFRACTION' r_sphericity_free 7.952 3.000 ? 79 ? 'X-RAY DIFFRACTION' r_sphericity_bonded 4.376 3.000 ? 1330 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.952 _refine_ls_shell.d_res_low 2.002 _refine_ls_shell.number_reflns_R_work 648 _refine_ls_shell.R_factor_R_work 0.196 _refine_ls_shell.percent_reflns_obs 69.29 _refine_ls_shell.R_factor_R_free 0.213 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 29 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4EQK _struct.title ;Crystal structure of the cap-binding domain of polymerase basic protein 2 from influenza virus A/Hong Kong/1/68 (h3n2) with bound m7GTP ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4EQK _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'cap binding, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 77 ? SER A 92 ? ASP A 390 SER A 405 1 ? 16 HELX_P HELX_P2 2 GLU A 94 ? VAL A 101 ? GLU A 407 VAL A 414 1 ? 8 HELX_P HELX_P3 3 ASN A 116 ? ASP A 128 ? ASN A 429 ASP A 441 1 ? 13 HELX_P HELX_P4 4 ALA A 129 ? GLY A 137 ? ALA A 442 GLY A 450 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 9 ? PHE A 12 ? SER A 322 PHE A 325 A 2 PHE A 15 ? GLY A 22 ? PHE A 328 GLY A 335 A 3 GLU A 48 ? VAL A 53 ? GLU A 361 VAL A 366 A 4 ALA A 57 ? ALA A 64 ? ALA A 370 ALA A 377 A 5 ARG A 67 ? GLY A 75 ? ARG A 380 GLY A 388 A 6 ILE A 165 ? VAL A 167 ? ILE A 478 VAL A 480 B 1 ILE A 25 ? LEU A 32 ? ILE A 338 LEU A 345 B 2 THR A 38 ? GLU A 45 ? THR A 351 GLU A 358 C 1 ILE A 138 ? HIS A 140 ? ILE A 451 HIS A 453 C 2 MET A 160 ? MET A 162 ? MET A 473 MET A 475 D 1 GLY A 149 ? VAL A 150 ? GLY A 462 VAL A 463 D 2 PRO A 156 ? SER A 157 ? PRO A 469 SER A 470 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 10 ? N PHE A 323 O PHE A 17 ? O PHE A 330 A 2 3 N THR A 20 ? N THR A 333 O GLU A 49 ? O GLU A 362 A 3 4 N GLU A 48 ? N GLU A 361 O LYS A 63 ? O LYS A 376 A 4 5 N ARG A 62 ? N ARG A 375 O GLN A 70 ? O GLN A 383 A 5 6 N LEU A 71 ? N LEU A 384 O ARG A 166 ? O ARG A 479 B 1 2 N LEU A 31 ? N LEU A 344 O LEU A 39 ? O LEU A 352 C 1 2 N GLU A 139 ? N GLU A 452 O SER A 161 ? O SER A 474 D 1 2 N GLY A 149 ? N GLY A 462 O SER A 157 ? O SER A 470 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NO3 501 ? 4 'BINDING SITE FOR RESIDUE NO3 A 501' AC2 Software A MGT 502 ? 16 'BINDING SITE FOR RESIDUE MGT A 502' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 THR A 58 ? THR A 371 . ? 8_455 ? 2 AC1 4 ILE A 72 ? ILE A 385 . ? 8_455 ? 3 AC1 4 ASN A 109 ? ASN A 422 . ? 1_555 ? 4 AC1 4 ARG A 110 ? ARG A 423 . ? 1_555 ? 5 AC2 16 SER A 8 ? SER A 321 . ? 1_555 ? 6 AC2 16 PHE A 10 ? PHE A 323 . ? 1_555 ? 7 AC2 16 SER A 11 ? SER A 324 . ? 1_555 ? 8 AC2 16 ARG A 19 ? ARG A 332 . ? 1_555 ? 9 AC2 16 LYS A 26 ? LYS A 339 . ? 1_555 ? 10 AC2 16 ARG A 42 ? ARG A 355 . ? 1_555 ? 11 AC2 16 HIS A 44 ? HIS A 357 . ? 1_555 ? 12 AC2 16 GLU A 48 ? GLU A 361 . ? 1_555 ? 13 AC2 16 PHE A 50 ? PHE A 363 . ? 1_555 ? 14 AC2 16 LYS A 63 ? LYS A 376 . ? 1_555 ? 15 AC2 16 PHE A 91 ? PHE A 404 . ? 1_555 ? 16 AC2 16 GLN A 93 ? GLN A 406 . ? 1_555 ? 17 AC2 16 ASN A 116 ? ASN A 429 . ? 1_555 ? 18 AC2 16 HIS A 119 ? HIS A 432 . ? 1_555 ? 19 AC2 16 LYS A 169 ? LYS A 482 . ? 8_455 ? 20 AC2 16 HOH D . ? HOH A 678 . ? 1_555 ? # _database_PDB_matrix.entry_id 4EQK _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4EQK _atom_sites.fract_transf_matrix[1][1] 0.018057 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014255 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010645 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 314 ? ? ? A . n A 1 2 SER 2 315 ? ? ? A . n A 1 3 HIS 3 316 ? ? ? A . n A 1 4 MET 4 317 ? ? ? A . n A 1 5 ARG 5 318 ? ? ? A . n A 1 6 ILE 6 319 ? ? ? A . n A 1 7 SER 7 320 ? ? ? A . n A 1 8 SER 8 321 321 SER SER A . n A 1 9 SER 9 322 322 SER SER A . n A 1 10 PHE 10 323 323 PHE PHE A . n A 1 11 SER 11 324 324 SER SER A . n A 1 12 PHE 12 325 325 PHE PHE A . n A 1 13 GLY 13 326 326 GLY GLY A . n A 1 14 GLY 14 327 327 GLY GLY A . n A 1 15 PHE 15 328 328 PHE PHE A . n A 1 16 THR 16 329 329 THR THR A . n A 1 17 PHE 17 330 330 PHE PHE A . n A 1 18 LYS 18 331 331 LYS LYS A . n A 1 19 ARG 19 332 332 ARG ARG A . n A 1 20 THR 20 333 333 THR THR A . n A 1 21 SER 21 334 334 SER SER A . n A 1 22 GLY 22 335 335 GLY GLY A . n A 1 23 SER 23 336 336 SER SER A . n A 1 24 SER 24 337 337 SER SER A . n A 1 25 ILE 25 338 338 ILE ILE A . n A 1 26 LYS 26 339 339 LYS LYS A . n A 1 27 ARG 27 340 340 ARG ARG A . n A 1 28 GLU 28 341 341 GLU GLU A . n A 1 29 GLU 29 342 342 GLU GLU A . n A 1 30 GLU 30 343 343 GLU GLU A . n A 1 31 LEU 31 344 344 LEU LEU A . n A 1 32 LEU 32 345 345 LEU LEU A . n A 1 33 THR 33 346 346 THR THR A . n A 1 34 GLY 34 347 347 GLY GLY A . n A 1 35 ASN 35 348 348 ASN ASN A . n A 1 36 LEU 36 349 349 LEU LEU A . n A 1 37 GLN 37 350 350 GLN GLN A . n A 1 38 THR 38 351 351 THR THR A . n A 1 39 LEU 39 352 352 LEU LEU A . n A 1 40 LYS 40 353 353 LYS LYS A . n A 1 41 ILE 41 354 354 ILE ILE A . n A 1 42 ARG 42 355 355 ARG ARG A . n A 1 43 VAL 43 356 356 VAL VAL A . n A 1 44 HIS 44 357 357 HIS HIS A . n A 1 45 GLU 45 358 358 GLU GLU A . n A 1 46 GLY 46 359 359 GLY GLY A . n A 1 47 TYR 47 360 360 TYR TYR A . n A 1 48 GLU 48 361 361 GLU GLU A . n A 1 49 GLU 49 362 362 GLU GLU A . n A 1 50 PHE 50 363 363 PHE PHE A . n A 1 51 THR 51 364 364 THR THR A . n A 1 52 MET 52 365 365 MET MET A . n A 1 53 VAL 53 366 366 VAL VAL A . n A 1 54 GLY 54 367 367 GLY GLY A . n A 1 55 LYS 55 368 368 LYS LYS A . n A 1 56 ARG 56 369 369 ARG ARG A . n A 1 57 ALA 57 370 370 ALA ALA A . n A 1 58 THR 58 371 371 THR THR A . n A 1 59 ALA 59 372 372 ALA ALA A . n A 1 60 ILE 60 373 373 ILE ILE A . n A 1 61 LEU 61 374 374 LEU LEU A . n A 1 62 ARG 62 375 375 ARG ARG A . n A 1 63 LYS 63 376 376 LYS LYS A . n A 1 64 ALA 64 377 377 ALA ALA A . n A 1 65 THR 65 378 378 THR THR A . n A 1 66 ARG 66 379 379 ARG ARG A . n A 1 67 ARG 67 380 380 ARG ARG A . n A 1 68 LEU 68 381 381 LEU LEU A . n A 1 69 VAL 69 382 382 VAL VAL A . n A 1 70 GLN 70 383 383 GLN GLN A . n A 1 71 LEU 71 384 384 LEU LEU A . n A 1 72 ILE 72 385 385 ILE ILE A . n A 1 73 VAL 73 386 386 VAL VAL A . n A 1 74 SER 74 387 387 SER SER A . n A 1 75 GLY 75 388 388 GLY GLY A . n A 1 76 ARG 76 389 389 ARG ARG A . n A 1 77 ASP 77 390 390 ASP ASP A . n A 1 78 GLU 78 391 391 GLU GLU A . n A 1 79 GLN 79 392 392 GLN GLN A . n A 1 80 SER 80 393 393 SER SER A . n A 1 81 VAL 81 394 394 VAL VAL A . n A 1 82 ALA 82 395 395 ALA ALA A . n A 1 83 GLU 83 396 396 GLU GLU A . n A 1 84 ALA 84 397 397 ALA ALA A . n A 1 85 ILE 85 398 398 ILE ILE A . n A 1 86 ILE 86 399 399 ILE ILE A . n A 1 87 VAL 87 400 400 VAL VAL A . n A 1 88 ALA 88 401 401 ALA ALA A . n A 1 89 MET 89 402 402 MET MET A . n A 1 90 VAL 90 403 403 VAL VAL A . n A 1 91 PHE 91 404 404 PHE PHE A . n A 1 92 SER 92 405 405 SER SER A . n A 1 93 GLN 93 406 406 GLN GLN A . n A 1 94 GLU 94 407 407 GLU GLU A . n A 1 95 ASP 95 408 408 ASP ASP A . n A 1 96 CYS 96 409 409 CYS CYS A . n A 1 97 MET 97 410 410 MET MET A . n A 1 98 ILE 98 411 411 ILE ILE A . n A 1 99 LYS 99 412 412 LYS LYS A . n A 1 100 ALA 100 413 413 ALA ALA A . n A 1 101 VAL 101 414 414 VAL VAL A . n A 1 102 ARG 102 415 415 ARG ARG A . n A 1 103 GLY 103 416 416 GLY GLY A . n A 1 104 ASP 104 417 417 ASP ASP A . n A 1 105 LEU 105 418 418 LEU LEU A . n A 1 106 ASN 106 419 419 ASN ASN A . n A 1 107 PHE 107 420 420 PHE PHE A . n A 1 108 VAL 108 421 421 VAL VAL A . n A 1 109 ASN 109 422 422 ASN ASN A . n A 1 110 ARG 110 423 423 ARG ARG A . n A 1 111 ALA 111 424 424 ALA ALA A . n A 1 112 ASN 112 425 425 ASN ASN A . n A 1 113 GLN 113 426 426 GLN GLN A . n A 1 114 ARG 114 427 427 ARG ARG A . n A 1 115 LEU 115 428 428 LEU LEU A . n A 1 116 ASN 116 429 429 ASN ASN A . n A 1 117 PRO 117 430 430 PRO PRO A . n A 1 118 MET 118 431 431 MET MET A . n A 1 119 HIS 119 432 432 HIS HIS A . n A 1 120 GLN 120 433 433 GLN GLN A . n A 1 121 LEU 121 434 434 LEU LEU A . n A 1 122 LEU 122 435 435 LEU LEU A . n A 1 123 ARG 123 436 436 ARG ARG A . n A 1 124 HIS 124 437 437 HIS HIS A . n A 1 125 PHE 125 438 438 PHE PHE A . n A 1 126 GLN 126 439 439 GLN GLN A . n A 1 127 LYS 127 440 440 LYS LYS A . n A 1 128 ASP 128 441 441 ASP ASP A . n A 1 129 ALA 129 442 442 ALA ALA A . n A 1 130 LYS 130 443 443 LYS LYS A . n A 1 131 VAL 131 444 444 VAL VAL A . n A 1 132 LEU 132 445 445 LEU LEU A . n A 1 133 PHE 133 446 446 PHE PHE A . n A 1 134 GLN 134 447 447 GLN GLN A . n A 1 135 ASN 135 448 448 ASN ASN A . n A 1 136 TRP 136 449 449 TRP TRP A . n A 1 137 GLY 137 450 450 GLY GLY A . n A 1 138 ILE 138 451 451 ILE ILE A . n A 1 139 GLU 139 452 452 GLU GLU A . n A 1 140 HIS 140 453 453 HIS HIS A . n A 1 141 ILE 141 454 454 ILE ILE A . n A 1 142 ASP 142 455 455 ASP ASP A . n A 1 143 ASN 143 456 456 ASN ASN A . n A 1 144 VAL 144 457 457 VAL VAL A . n A 1 145 MET 145 458 458 MET MET A . n A 1 146 GLY 146 459 459 GLY GLY A . n A 1 147 MET 147 460 460 MET MET A . n A 1 148 ILE 148 461 461 ILE ILE A . n A 1 149 GLY 149 462 462 GLY GLY A . n A 1 150 VAL 150 463 463 VAL VAL A . n A 1 151 LEU 151 464 464 LEU LEU A . n A 1 152 PRO 152 465 465 PRO PRO A . n A 1 153 ASP 153 466 466 ASP ASP A . n A 1 154 MET 154 467 467 MET MET A . n A 1 155 THR 155 468 468 THR THR A . n A 1 156 PRO 156 469 469 PRO PRO A . n A 1 157 SER 157 470 470 SER SER A . n A 1 158 THR 158 471 471 THR THR A . n A 1 159 GLU 159 472 472 GLU GLU A . n A 1 160 MET 160 473 473 MET MET A . n A 1 161 SER 161 474 474 SER SER A . n A 1 162 MET 162 475 475 MET MET A . n A 1 163 ARG 163 476 476 ARG ARG A . n A 1 164 GLY 164 477 477 GLY GLY A . n A 1 165 ILE 165 478 478 ILE ILE A . n A 1 166 ARG 166 479 479 ARG ARG A . n A 1 167 VAL 167 480 480 VAL VAL A . n A 1 168 SER 168 481 481 SER SER A . n A 1 169 LYS 169 482 482 LYS LYS A . n A 1 170 MET 170 483 483 MET MET A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 1 501 501 NO3 NO3 A . C 3 MGT 1 502 801 MGT MGT A . D 4 HOH 1 601 1 HOH HOH A . D 4 HOH 2 602 2 HOH HOH A . D 4 HOH 3 603 3 HOH HOH A . D 4 HOH 4 604 4 HOH HOH A . D 4 HOH 5 605 5 HOH HOH A . D 4 HOH 6 606 6 HOH HOH A . D 4 HOH 7 607 7 HOH HOH A . D 4 HOH 8 608 8 HOH HOH A . D 4 HOH 9 609 9 HOH HOH A . D 4 HOH 10 610 10 HOH HOH A . D 4 HOH 11 611 11 HOH HOH A . D 4 HOH 12 612 12 HOH HOH A . D 4 HOH 13 613 13 HOH HOH A . D 4 HOH 14 614 14 HOH HOH A . D 4 HOH 15 615 15 HOH HOH A . D 4 HOH 16 616 16 HOH HOH A . D 4 HOH 17 617 17 HOH HOH A . D 4 HOH 18 618 18 HOH HOH A . D 4 HOH 19 619 19 HOH HOH A . D 4 HOH 20 620 20 HOH HOH A . D 4 HOH 21 621 21 HOH HOH A . D 4 HOH 22 622 22 HOH HOH A . D 4 HOH 23 623 23 HOH HOH A . D 4 HOH 24 624 24 HOH HOH A . D 4 HOH 25 625 25 HOH HOH A . D 4 HOH 26 626 26 HOH HOH A . D 4 HOH 27 627 27 HOH HOH A . D 4 HOH 28 628 28 HOH HOH A . D 4 HOH 29 629 29 HOH HOH A . D 4 HOH 30 630 30 HOH HOH A . D 4 HOH 31 631 31 HOH HOH A . D 4 HOH 32 632 32 HOH HOH A . D 4 HOH 33 633 33 HOH HOH A . D 4 HOH 34 634 34 HOH HOH A . D 4 HOH 35 635 35 HOH HOH A . D 4 HOH 36 636 36 HOH HOH A . D 4 HOH 37 637 37 HOH HOH A . D 4 HOH 38 638 38 HOH HOH A . D 4 HOH 39 639 39 HOH HOH A . D 4 HOH 40 640 40 HOH HOH A . D 4 HOH 41 641 41 HOH HOH A . D 4 HOH 42 642 42 HOH HOH A . D 4 HOH 43 643 43 HOH HOH A . D 4 HOH 44 644 44 HOH HOH A . D 4 HOH 45 645 45 HOH HOH A . D 4 HOH 46 646 46 HOH HOH A . D 4 HOH 47 647 47 HOH HOH A . D 4 HOH 48 648 48 HOH HOH A . D 4 HOH 49 649 49 HOH HOH A . D 4 HOH 50 650 50 HOH HOH A . D 4 HOH 51 651 51 HOH HOH A . D 4 HOH 52 652 52 HOH HOH A . D 4 HOH 53 653 53 HOH HOH A . D 4 HOH 54 654 54 HOH HOH A . D 4 HOH 55 655 55 HOH HOH A . D 4 HOH 56 656 56 HOH HOH A . D 4 HOH 57 657 57 HOH HOH A . D 4 HOH 58 658 58 HOH HOH A . D 4 HOH 59 659 59 HOH HOH A . D 4 HOH 60 660 60 HOH HOH A . D 4 HOH 61 661 61 HOH HOH A . D 4 HOH 62 662 62 HOH HOH A . D 4 HOH 63 663 63 HOH HOH A . D 4 HOH 64 664 64 HOH HOH A . D 4 HOH 65 665 65 HOH HOH A . D 4 HOH 66 666 66 HOH HOH A . D 4 HOH 67 667 67 HOH HOH A . D 4 HOH 68 668 68 HOH HOH A . D 4 HOH 69 669 69 HOH HOH A . D 4 HOH 70 670 70 HOH HOH A . D 4 HOH 71 671 71 HOH HOH A . D 4 HOH 72 672 72 HOH HOH A . D 4 HOH 73 673 73 HOH HOH A . D 4 HOH 74 674 74 HOH HOH A . D 4 HOH 75 675 75 HOH HOH A . D 4 HOH 76 676 76 HOH HOH A . D 4 HOH 77 677 77 HOH HOH A . D 4 HOH 78 678 78 HOH HOH A . D 4 HOH 79 679 79 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-06 2 'Structure model' 1 1 2014-03-12 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.5.0110 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 VAL _pdbx_validate_rmsd_bond.auth_seq_id_1 444 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CG2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 VAL _pdbx_validate_rmsd_bond.auth_seq_id_2 444 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.657 _pdbx_validate_rmsd_bond.bond_target_value 1.524 _pdbx_validate_rmsd_bond.bond_deviation 0.133 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.021 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 415 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 415 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 415 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.27 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.03 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 349 ? ? 70.09 31.74 2 1 ALA A 377 ? ? -119.71 -159.30 3 1 ARG A 423 ? ? -64.37 7.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 314 ? A GLY 1 2 1 Y 1 A SER 315 ? A SER 2 3 1 Y 1 A HIS 316 ? A HIS 3 4 1 Y 1 A MET 317 ? A MET 4 5 1 Y 1 A ARG 318 ? A ARG 5 6 1 Y 1 A ILE 319 ? A ILE 6 7 1 Y 1 A SER 320 ? A SER 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 MGT PG P N N 250 MGT O1G O N N 251 MGT O2G O N N 252 MGT O3G O N N 253 MGT O3B O N N 254 MGT PB P N R 255 MGT O1B O N N 256 MGT O2B O N N 257 MGT O3A O N N 258 MGT PA P N S 259 MGT O1A O N N 260 MGT O2A O N N 261 MGT "O5'" O N N 262 MGT "C5'" C N N 263 MGT "C4'" C N R 264 MGT "O4'" O N N 265 MGT "C3'" C N S 266 MGT "O3'" O N N 267 MGT "C2'" C N R 268 MGT "O2'" O N N 269 MGT "C1'" C N R 270 MGT N9 N N N 271 MGT C8 C N N 272 MGT N7 N N N 273 MGT CM7 C N N 274 MGT C5 C N N 275 MGT C6 C N N 276 MGT O6 O N N 277 MGT N1 N N N 278 MGT C2 C N N 279 MGT N2 N N N 280 MGT N3 N N N 281 MGT C4 C N N 282 MGT HOG2 H N N 283 MGT HOG3 H N N 284 MGT HOB2 H N N 285 MGT HOA2 H N N 286 MGT "H5'1" H N N 287 MGT "H5'2" H N N 288 MGT "H4'" H N N 289 MGT "H3'" H N N 290 MGT "HO3'" H N N 291 MGT "H2'" H N N 292 MGT "HO2'" H N N 293 MGT "H1'" H N N 294 MGT H81 H N N 295 MGT H82 H N N 296 MGT HM71 H N N 297 MGT HM72 H N N 298 MGT HM73 H N N 299 MGT HN1 H N N 300 MGT HN21 H N N 301 MGT HN22 H N N 302 NO3 N N N N 303 NO3 O1 O N N 304 NO3 O2 O N N 305 NO3 O3 O N N 306 PHE N N N N 307 PHE CA C N S 308 PHE C C N N 309 PHE O O N N 310 PHE CB C N N 311 PHE CG C Y N 312 PHE CD1 C Y N 313 PHE CD2 C Y N 314 PHE CE1 C Y N 315 PHE CE2 C Y N 316 PHE CZ C Y N 317 PHE OXT O N N 318 PHE H H N N 319 PHE H2 H N N 320 PHE HA H N N 321 PHE HB2 H N N 322 PHE HB3 H N N 323 PHE HD1 H N N 324 PHE HD2 H N N 325 PHE HE1 H N N 326 PHE HE2 H N N 327 PHE HZ H N N 328 PHE HXT H N N 329 PRO N N N N 330 PRO CA C N S 331 PRO C C N N 332 PRO O O N N 333 PRO CB C N N 334 PRO CG C N N 335 PRO CD C N N 336 PRO OXT O N N 337 PRO H H N N 338 PRO HA H N N 339 PRO HB2 H N N 340 PRO HB3 H N N 341 PRO HG2 H N N 342 PRO HG3 H N N 343 PRO HD2 H N N 344 PRO HD3 H N N 345 PRO HXT H N N 346 SER N N N N 347 SER CA C N S 348 SER C C N N 349 SER O O N N 350 SER CB C N N 351 SER OG O N N 352 SER OXT O N N 353 SER H H N N 354 SER H2 H N N 355 SER HA H N N 356 SER HB2 H N N 357 SER HB3 H N N 358 SER HG H N N 359 SER HXT H N N 360 THR N N N N 361 THR CA C N S 362 THR C C N N 363 THR O O N N 364 THR CB C N R 365 THR OG1 O N N 366 THR CG2 C N N 367 THR OXT O N N 368 THR H H N N 369 THR H2 H N N 370 THR HA H N N 371 THR HB H N N 372 THR HG1 H N N 373 THR HG21 H N N 374 THR HG22 H N N 375 THR HG23 H N N 376 THR HXT H N N 377 TRP N N N N 378 TRP CA C N S 379 TRP C C N N 380 TRP O O N N 381 TRP CB C N N 382 TRP CG C Y N 383 TRP CD1 C Y N 384 TRP CD2 C Y N 385 TRP NE1 N Y N 386 TRP CE2 C Y N 387 TRP CE3 C Y N 388 TRP CZ2 C Y N 389 TRP CZ3 C Y N 390 TRP CH2 C Y N 391 TRP OXT O N N 392 TRP H H N N 393 TRP H2 H N N 394 TRP HA H N N 395 TRP HB2 H N N 396 TRP HB3 H N N 397 TRP HD1 H N N 398 TRP HE1 H N N 399 TRP HE3 H N N 400 TRP HZ2 H N N 401 TRP HZ3 H N N 402 TRP HH2 H N N 403 TRP HXT H N N 404 TYR N N N N 405 TYR CA C N S 406 TYR C C N N 407 TYR O O N N 408 TYR CB C N N 409 TYR CG C Y N 410 TYR CD1 C Y N 411 TYR CD2 C Y N 412 TYR CE1 C Y N 413 TYR CE2 C Y N 414 TYR CZ C Y N 415 TYR OH O N N 416 TYR OXT O N N 417 TYR H H N N 418 TYR H2 H N N 419 TYR HA H N N 420 TYR HB2 H N N 421 TYR HB3 H N N 422 TYR HD1 H N N 423 TYR HD2 H N N 424 TYR HE1 H N N 425 TYR HE2 H N N 426 TYR HH H N N 427 TYR HXT H N N 428 VAL N N N N 429 VAL CA C N S 430 VAL C C N N 431 VAL O O N N 432 VAL CB C N N 433 VAL CG1 C N N 434 VAL CG2 C N N 435 VAL OXT O N N 436 VAL H H N N 437 VAL H2 H N N 438 VAL HA H N N 439 VAL HB H N N 440 VAL HG11 H N N 441 VAL HG12 H N N 442 VAL HG13 H N N 443 VAL HG21 H N N 444 VAL HG22 H N N 445 VAL HG23 H N N 446 VAL HXT H N N 447 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 MGT PG O1G doub N N 237 MGT PG O2G sing N N 238 MGT PG O3G sing N N 239 MGT PG O3B sing N N 240 MGT O2G HOG2 sing N N 241 MGT O3G HOG3 sing N N 242 MGT O3B PB sing N N 243 MGT PB O1B doub N N 244 MGT PB O2B sing N N 245 MGT PB O3A sing N N 246 MGT O2B HOB2 sing N N 247 MGT O3A PA sing N N 248 MGT PA O1A doub N N 249 MGT PA O2A sing N N 250 MGT PA "O5'" sing N N 251 MGT O2A HOA2 sing N N 252 MGT "O5'" "C5'" sing N N 253 MGT "C5'" "C4'" sing N N 254 MGT "C5'" "H5'1" sing N N 255 MGT "C5'" "H5'2" sing N N 256 MGT "C4'" "O4'" sing N N 257 MGT "C4'" "C3'" sing N N 258 MGT "C4'" "H4'" sing N N 259 MGT "O4'" "C1'" sing N N 260 MGT "C3'" "O3'" sing N N 261 MGT "C3'" "C2'" sing N N 262 MGT "C3'" "H3'" sing N N 263 MGT "O3'" "HO3'" sing N N 264 MGT "C2'" "O2'" sing N N 265 MGT "C2'" "C1'" sing N N 266 MGT "C2'" "H2'" sing N N 267 MGT "O2'" "HO2'" sing N N 268 MGT "C1'" N9 sing N N 269 MGT "C1'" "H1'" sing N N 270 MGT N9 C8 sing N N 271 MGT N9 C4 sing N N 272 MGT C8 N7 sing N N 273 MGT C8 H81 sing N N 274 MGT C8 H82 sing N N 275 MGT N7 CM7 sing N N 276 MGT N7 C5 sing N N 277 MGT CM7 HM71 sing N N 278 MGT CM7 HM72 sing N N 279 MGT CM7 HM73 sing N N 280 MGT C5 C6 sing N N 281 MGT C5 C4 doub N N 282 MGT C6 O6 doub N N 283 MGT C6 N1 sing N N 284 MGT N1 C2 sing N N 285 MGT N1 HN1 sing N N 286 MGT C2 N2 sing N N 287 MGT C2 N3 doub N N 288 MGT N2 HN21 sing N N 289 MGT N2 HN22 sing N N 290 MGT N3 C4 sing N N 291 NO3 N O1 doub N N 292 NO3 N O2 sing N N 293 NO3 N O3 sing N N 294 PHE N CA sing N N 295 PHE N H sing N N 296 PHE N H2 sing N N 297 PHE CA C sing N N 298 PHE CA CB sing N N 299 PHE CA HA sing N N 300 PHE C O doub N N 301 PHE C OXT sing N N 302 PHE CB CG sing N N 303 PHE CB HB2 sing N N 304 PHE CB HB3 sing N N 305 PHE CG CD1 doub Y N 306 PHE CG CD2 sing Y N 307 PHE CD1 CE1 sing Y N 308 PHE CD1 HD1 sing N N 309 PHE CD2 CE2 doub Y N 310 PHE CD2 HD2 sing N N 311 PHE CE1 CZ doub Y N 312 PHE CE1 HE1 sing N N 313 PHE CE2 CZ sing Y N 314 PHE CE2 HE2 sing N N 315 PHE CZ HZ sing N N 316 PHE OXT HXT sing N N 317 PRO N CA sing N N 318 PRO N CD sing N N 319 PRO N H sing N N 320 PRO CA C sing N N 321 PRO CA CB sing N N 322 PRO CA HA sing N N 323 PRO C O doub N N 324 PRO C OXT sing N N 325 PRO CB CG sing N N 326 PRO CB HB2 sing N N 327 PRO CB HB3 sing N N 328 PRO CG CD sing N N 329 PRO CG HG2 sing N N 330 PRO CG HG3 sing N N 331 PRO CD HD2 sing N N 332 PRO CD HD3 sing N N 333 PRO OXT HXT sing N N 334 SER N CA sing N N 335 SER N H sing N N 336 SER N H2 sing N N 337 SER CA C sing N N 338 SER CA CB sing N N 339 SER CA HA sing N N 340 SER C O doub N N 341 SER C OXT sing N N 342 SER CB OG sing N N 343 SER CB HB2 sing N N 344 SER CB HB3 sing N N 345 SER OG HG sing N N 346 SER OXT HXT sing N N 347 THR N CA sing N N 348 THR N H sing N N 349 THR N H2 sing N N 350 THR CA C sing N N 351 THR CA CB sing N N 352 THR CA HA sing N N 353 THR C O doub N N 354 THR C OXT sing N N 355 THR CB OG1 sing N N 356 THR CB CG2 sing N N 357 THR CB HB sing N N 358 THR OG1 HG1 sing N N 359 THR CG2 HG21 sing N N 360 THR CG2 HG22 sing N N 361 THR CG2 HG23 sing N N 362 THR OXT HXT sing N N 363 TRP N CA sing N N 364 TRP N H sing N N 365 TRP N H2 sing N N 366 TRP CA C sing N N 367 TRP CA CB sing N N 368 TRP CA HA sing N N 369 TRP C O doub N N 370 TRP C OXT sing N N 371 TRP CB CG sing N N 372 TRP CB HB2 sing N N 373 TRP CB HB3 sing N N 374 TRP CG CD1 doub Y N 375 TRP CG CD2 sing Y N 376 TRP CD1 NE1 sing Y N 377 TRP CD1 HD1 sing N N 378 TRP CD2 CE2 doub Y N 379 TRP CD2 CE3 sing Y N 380 TRP NE1 CE2 sing Y N 381 TRP NE1 HE1 sing N N 382 TRP CE2 CZ2 sing Y N 383 TRP CE3 CZ3 doub Y N 384 TRP CE3 HE3 sing N N 385 TRP CZ2 CH2 doub Y N 386 TRP CZ2 HZ2 sing N N 387 TRP CZ3 CH2 sing Y N 388 TRP CZ3 HZ3 sing N N 389 TRP CH2 HH2 sing N N 390 TRP OXT HXT sing N N 391 TYR N CA sing N N 392 TYR N H sing N N 393 TYR N H2 sing N N 394 TYR CA C sing N N 395 TYR CA CB sing N N 396 TYR CA HA sing N N 397 TYR C O doub N N 398 TYR C OXT sing N N 399 TYR CB CG sing N N 400 TYR CB HB2 sing N N 401 TYR CB HB3 sing N N 402 TYR CG CD1 doub Y N 403 TYR CG CD2 sing Y N 404 TYR CD1 CE1 sing Y N 405 TYR CD1 HD1 sing N N 406 TYR CD2 CE2 doub Y N 407 TYR CD2 HD2 sing N N 408 TYR CE1 CZ doub Y N 409 TYR CE1 HE1 sing N N 410 TYR CE2 CZ sing Y N 411 TYR CE2 HE2 sing N N 412 TYR CZ OH sing N N 413 TYR OH HH sing N N 414 TYR OXT HXT sing N N 415 VAL N CA sing N N 416 VAL N H sing N N 417 VAL N H2 sing N N 418 VAL CA C sing N N 419 VAL CA CB sing N N 420 VAL CA HA sing N N 421 VAL C O doub N N 422 VAL C OXT sing N N 423 VAL CB CG1 sing N N 424 VAL CB CG2 sing N N 425 VAL CB HB sing N N 426 VAL CG1 HG11 sing N N 427 VAL CG1 HG12 sing N N 428 VAL CG1 HG13 sing N N 429 VAL CG2 HG21 sing N N 430 VAL CG2 HG22 sing N N 431 VAL CG2 HG23 sing N N 432 VAL OXT HXT sing N N 433 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NITRATE ION' NO3 3 "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" MGT 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VQZ _pdbx_initial_refinement_model.details 'PDB ENTRY 2VQZ' #