HEADER HYDROLASE/DNA 23-APR-12 4ESJ TITLE RESTRICTION ENDONUCLEASE DPNI IN COMPLEX WITH TARGET DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYPE-2 RESTRICTION ENZYME DPNI; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: R.DPNI, ENDONUCLEASE DPNI, TYPE II RESTRICTION ENZYME DPNI; COMPND 5 EC: 3.1.21.4; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*CP*TP*GP*GP*(6MA)P*TP*CP*CP*AP*G)-3'); COMPND 9 CHAIN: C, D, E, F; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 GENE: DPNC, SPR1665; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ER2925; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_TAXID: 32630; SOURCE 14 OTHER_DETAILS: SYNTHETIC OLIGONUCLEOTIDE KEYWDS RESTRICTION ENDONUCLEASE-DNA COMPLEX, TYPE IIM, TYPE IIE, RESTRICTION KEYWDS 2 ENZYME, DPNI, METHYLATION DEPENDENT, N6-METHYLADENINE, PD-(D/E)XK KEYWDS 3 TYPE ENDONUCLEASE, WINGED HELIX DOMAIN, RESTRICTION ENDONUCLEASE, KEYWDS 4 DNA BINDING, HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.SIWEK,H.CZAPINSKA,M.BOCHTLER,J.M.BUJNICKI,K.SKOWRONEK REVDAT 3 28-FEB-24 4ESJ 1 REMARK SEQADV LINK REVDAT 2 17-OCT-12 4ESJ 1 JRNL REVDAT 1 13-JUN-12 4ESJ 0 JRNL AUTH W.SIWEK,H.CZAPINSKA,M.BOCHTLER,J.M.BUJNICKI,K.SKOWRONEK JRNL TITL CRYSTAL STRUCTURE AND MECHANISM OF ACTION OF THE JRNL TITL 2 N6-METHYLADENINE-DEPENDENT TYPE IIM RESTRICTION ENDONUCLEASE JRNL TITL 3 R.DPNI. JRNL REF NUCLEIC ACIDS RES. V. 40 7563 2012 JRNL REFN ISSN 0305-1048 JRNL PMID 22610857 JRNL DOI 10.1093/NAR/GKS428 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 60188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3032 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4178 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.3050 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4036 REMARK 3 NUCLEIC ACID ATOMS : 730 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 197 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.45000 REMARK 3 B22 (A**2) : -0.44000 REMARK 3 B33 (A**2) : -0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.81000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.156 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5183 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3449 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7150 ; 1.240 ; 2.134 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8425 ; 3.954 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 532 ; 6.112 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 228 ;37.568 ;24.518 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 831 ;14.768 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;19.503 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 753 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5311 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 997 ; 0.007 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 895 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3331 ; 0.246 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2423 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2225 ; 0.109 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 198 ; 0.123 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.249 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 78 ; 0.283 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 25 ; 0.181 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 1 ; 0.239 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2581 ; 0.657 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1032 ; 0.000 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4215 ; 1.201 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2602 ; 1.736 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2935 ; 2.725 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -1 A 182 REMARK 3 RESIDUE RANGE : A 301 A 301 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0960 20.6740 -5.2800 REMARK 3 T TENSOR REMARK 3 T11: -0.1902 T22: -0.0816 REMARK 3 T33: 0.0579 T12: -0.0484 REMARK 3 T13: -0.0602 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 1.9433 L22: 2.2749 REMARK 3 L33: 0.9341 L12: 1.4461 REMARK 3 L13: 0.4369 L23: 0.2279 REMARK 3 S TENSOR REMARK 3 S11: -0.0840 S12: -0.0124 S13: -0.0091 REMARK 3 S21: -0.0852 S22: 0.0316 S23: -0.0923 REMARK 3 S31: -0.1435 S32: 0.2281 S33: 0.0525 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 183 A 254 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6290 39.1120 9.0060 REMARK 3 T TENSOR REMARK 3 T11: -0.1977 T22: 0.0019 REMARK 3 T33: -0.0009 T12: -0.1619 REMARK 3 T13: -0.0252 T23: 0.0255 REMARK 3 L TENSOR REMARK 3 L11: 4.0298 L22: 5.2341 REMARK 3 L33: 2.3816 L12: 1.7685 REMARK 3 L13: 0.3665 L23: 0.3268 REMARK 3 S TENSOR REMARK 3 S11: 0.2369 S12: -0.5374 S13: 0.0174 REMARK 3 S21: 0.3173 S22: -0.1256 S23: 0.3042 REMARK 3 S31: 0.3152 S32: -0.3396 S33: -0.1113 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 182 REMARK 3 RESIDUE RANGE : B 301 B 301 REMARK 3 ORIGIN FOR THE GROUP (A): 3.7920 10.7080 28.6810 REMARK 3 T TENSOR REMARK 3 T11: -0.1062 T22: -0.0850 REMARK 3 T33: 0.0492 T12: -0.0012 REMARK 3 T13: -0.1000 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 1.6100 L22: 2.7522 REMARK 3 L33: 3.3425 L12: 1.3296 REMARK 3 L13: 1.6435 L23: 0.9852 REMARK 3 S TENSOR REMARK 3 S11: 0.1889 S12: -0.0567 S13: -0.2138 REMARK 3 S21: 0.4516 S22: 0.0526 S23: -0.2363 REMARK 3 S31: 0.1956 S32: 0.1590 S33: -0.2415 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 183 B 254 REMARK 3 ORIGIN FOR THE GROUP (A): 13.0310 25.9510 50.0800 REMARK 3 T TENSOR REMARK 3 T11: -0.0147 T22: -0.0616 REMARK 3 T33: -0.1684 T12: -0.2056 REMARK 3 T13: -0.0573 T23: -0.0990 REMARK 3 L TENSOR REMARK 3 L11: 5.7732 L22: 7.2877 REMARK 3 L33: 8.0794 L12: 1.9756 REMARK 3 L13: 0.1882 L23: 2.8860 REMARK 3 S TENSOR REMARK 3 S11: 0.6462 S12: -0.5814 S13: -0.1607 REMARK 3 S21: 0.1442 S22: -0.1996 S23: -0.1701 REMARK 3 S31: 0.3043 S32: 0.2283 S33: -0.4466 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 10 REMARK 3 RESIDUE RANGE : D 1 D 10 REMARK 3 ORIGIN FOR THE GROUP (A): 45.3000 48.5330 2.7710 REMARK 3 T TENSOR REMARK 3 T11: -0.1827 T22: -0.0440 REMARK 3 T33: 0.0037 T12: -0.0619 REMARK 3 T13: -0.0312 T23: -0.0615 REMARK 3 L TENSOR REMARK 3 L11: 2.6037 L22: 3.0645 REMARK 3 L33: 1.7288 L12: 0.7838 REMARK 3 L13: 0.1852 L23: 0.1169 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: 0.0909 S13: 0.0505 REMARK 3 S21: 0.0308 S22: 0.0806 S23: -0.0919 REMARK 3 S31: 0.1248 S32: -0.1587 S33: -0.1113 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 3 E 10 REMARK 3 RESIDUE RANGE : F 1 F 8 REMARK 3 ORIGIN FOR THE GROUP (A): 20.2700 39.1410 52.2130 REMARK 3 T TENSOR REMARK 3 T11: 0.0709 T22: 0.0876 REMARK 3 T33: -0.0764 T12: -0.3151 REMARK 3 T13: 0.1144 T23: -0.1897 REMARK 3 L TENSOR REMARK 3 L11: 2.7575 L22: 7.6548 REMARK 3 L33: 9.8561 L12: -0.1684 REMARK 3 L13: -1.5812 L23: 6.3896 REMARK 3 S TENSOR REMARK 3 S11: -0.1073 S12: -0.0045 S13: 0.3431 REMARK 3 S21: -0.6290 S22: 0.6961 S23: -0.7602 REMARK 3 S31: -0.3177 S32: 0.3384 S33: -0.5888 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: PROGRAM CNS HAS BEEN USED FOR DNA REMARK 3 REFINEMENT. NO SUGAR PUCKER CONSTRAINTS HAVE BEEN APPLIED. REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. TLS REMARK 3 REFINEMENT HAS BEEN USED. REMARK 4 REMARK 4 4ESJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000072015. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949,1.2833,1.2835 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : BENT MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC Q315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60190 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.02800 REMARK 200 R SYM (I) : 0.02800 REMARK 200 FOR THE DATA SET : 17.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : 0.30000 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXDE, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM POTASSIUM SULFATE, 100 MM REMARK 280 BETAINE, 20 % W/V PEG 3350, PH 6.8. FOR CRYOCOOLING THE REMARK 280 CRYSTALLIZATION BUFFER WAS MIXED IN 3:1 RATIO WITH 100% GLYCEROL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.25900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.20550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.25900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 49.20550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT CONTAINS A MONOMERIC PROTEIN AND DOUBLE REMARK 300 STRANDED DNA FRAGMENT BOUND TO ITS C-TERMINAL WINGED HELIX DOMAIN REMARK 300 (ASSEMBLY 1 COMPRISES CHAINS A,C,D; ASSEMBLY 2 COMPRISES CHAINS B,E, REMARK 300 F). TO THE BEST OF OUR KNOWLEDGE ADDITIONAL COPY OF DOUBLE STRANDED REMARK 300 TARGET DNA BINDS TO THE N-TERMINAL CATALYTIC DOMAIN OF THE ENZYME REMARK 300 IN SOLUTION. THE TRIMER (ACCORDING TO PDB CONVENTIONS) IS A COMPLEX REMARK 300 OF THE MONOMERIC ENZYME WITH DOUBLE STRANDED DNA FRAGMENT PRESENT REMARK 300 IN THE CRYSTAL REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 302 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 GLU A 46 REMARK 465 ASN A 47 REMARK 465 ASN A 48 REMARK 465 ARG A 49 REMARK 465 PRO A 131 REMARK 465 THR A 132 REMARK 465 ALA A 133 REMARK 465 ASN A 134 REMARK 465 ARG A 135 REMARK 465 ALA A 136 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 465 HIS B 0 REMARK 465 ASN B 47 REMARK 465 ASN B 48 REMARK 465 ARG B 49 REMARK 465 PRO B 50 REMARK 465 LEU B 129 REMARK 465 ALA B 130 REMARK 465 PRO B 131 REMARK 465 THR B 132 REMARK 465 ALA B 133 REMARK 465 ASN B 134 REMARK 465 ARG B 135 REMARK 465 ALA B 136 REMARK 465 GLY B 137 REMARK 465 DC E 1 REMARK 465 DT E 2 REMARK 465 DA F 9 REMARK 465 DG F 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DG E 3 P OP1 OP2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASP A 78 CG OD1 OD2 REMARK 480 ASP B 78 CG OD1 OD2 REMARK 480 LYS B 103 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG D 3 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 78 -149.87 -119.70 REMARK 500 LYS A 127 64.41 33.18 REMARK 500 TRP A 138 108.58 -163.90 REMARK 500 ASP A 159 61.11 26.57 REMARK 500 HIS A 225 59.16 -140.54 REMARK 500 PHE B 45 -169.86 -75.39 REMARK 500 ASP B 78 -158.92 -107.50 REMARK 500 ASN B 104 45.14 -105.60 REMARK 500 HIS B 225 58.57 -142.72 REMARK 500 ARG B 248 44.66 70.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DT D 2 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 2 OE1 REMARK 620 2 HIS A 4 ND1 108.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 34 SG REMARK 620 2 CYS A 37 SG 115.7 REMARK 620 3 CYS A 56 SG 108.2 100.3 REMARK 620 4 CYS A 59 SG 101.6 120.1 110.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 34 SG REMARK 620 2 CYS B 37 SG 114.0 REMARK 620 3 CYS B 56 SG 111.4 102.5 REMARK 620 4 CYS B 59 SG 102.3 118.4 108.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AZI A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 101 DBREF 4ESJ A 1 254 UNP P0A460 T2D1_STRR6 1 254 DBREF 4ESJ B 1 254 UNP P0A460 T2D1_STRR6 1 254 DBREF 4ESJ C 1 10 PDB 4ESJ 4ESJ 1 10 DBREF 4ESJ D 1 10 PDB 4ESJ 4ESJ 1 10 DBREF 4ESJ E 1 10 PDB 4ESJ 4ESJ 1 10 DBREF 4ESJ F 1 10 PDB 4ESJ 4ESJ 1 10 SEQADV 4ESJ GLY A -2 UNP P0A460 EXPRESSION TAG SEQADV 4ESJ PRO A -1 UNP P0A460 EXPRESSION TAG SEQADV 4ESJ HIS A 0 UNP P0A460 EXPRESSION TAG SEQADV 4ESJ ASN A 134 UNP P0A460 ARG 134 ENGINEERED MUTATION SEQADV 4ESJ GLY B -2 UNP P0A460 EXPRESSION TAG SEQADV 4ESJ PRO B -1 UNP P0A460 EXPRESSION TAG SEQADV 4ESJ HIS B 0 UNP P0A460 EXPRESSION TAG SEQADV 4ESJ ASN B 134 UNP P0A460 ARG 134 ENGINEERED MUTATION SEQRES 1 A 257 GLY PRO HIS MET GLU LEU HIS PHE ASN LEU GLU LEU VAL SEQRES 2 A 257 GLU THR TYR LYS SER ASN SER GLN LYS ALA ARG ILE LEU SEQRES 3 A 257 THR GLU ASP TRP VAL TYR ARG GLN SER TYR CYS PRO ASN SEQRES 4 A 257 CYS GLY ASN ASN PRO LEU ASN HIS PHE GLU ASN ASN ARG SEQRES 5 A 257 PRO VAL ALA ASP PHE TYR CYS ASN HIS CYS SER GLU GLU SEQRES 6 A 257 PHE GLU LEU LYS SER LYS LYS GLY ASN PHE SER SER THR SEQRES 7 A 257 ILE ASN ASP GLY ALA TYR ALA THR MET MET LYS ARG VAL SEQRES 8 A 257 GLN ALA ASP ASN ASN PRO ASN PHE PHE PHE LEU THR TYR SEQRES 9 A 257 THR LYS ASN PHE GLU VAL ASN ASN PHE LEU VAL LEU PRO SEQRES 10 A 257 LYS GLN PHE VAL THR PRO LYS SER ILE ILE GLN ARG LYS SEQRES 11 A 257 PRO LEU ALA PRO THR ALA ASN ARG ALA GLY TRP ILE GLY SEQRES 12 A 257 CYS ASN ILE ASP LEU SER GLN VAL PRO SER LYS GLY ARG SEQRES 13 A 257 ILE PHE LEU VAL GLN ASP GLY GLN VAL ARG ASP PRO GLU SEQRES 14 A 257 LYS VAL THR LYS GLU PHE LYS GLN GLY LEU PHE LEU ARG SEQRES 15 A 257 LYS SER SER LEU SER SER ARG GLY TRP THR ILE GLU ILE SEQRES 16 A 257 LEU ASN CYS ILE ASP LYS ILE GLU GLY SER GLU PHE THR SEQRES 17 A 257 LEU GLU ASP MET TYR ARG PHE GLU SER ASP LEU LYS ASN SEQRES 18 A 257 ILE PHE VAL LYS ASN ASN HIS ILE LYS GLU LYS ILE ARG SEQRES 19 A 257 GLN GLN LEU GLN ILE LEU ARG ASP LYS GLU ILE ILE GLU SEQRES 20 A 257 PHE LYS GLY ARG GLY LYS TYR ARG LYS LEU SEQRES 1 B 257 GLY PRO HIS MET GLU LEU HIS PHE ASN LEU GLU LEU VAL SEQRES 2 B 257 GLU THR TYR LYS SER ASN SER GLN LYS ALA ARG ILE LEU SEQRES 3 B 257 THR GLU ASP TRP VAL TYR ARG GLN SER TYR CYS PRO ASN SEQRES 4 B 257 CYS GLY ASN ASN PRO LEU ASN HIS PHE GLU ASN ASN ARG SEQRES 5 B 257 PRO VAL ALA ASP PHE TYR CYS ASN HIS CYS SER GLU GLU SEQRES 6 B 257 PHE GLU LEU LYS SER LYS LYS GLY ASN PHE SER SER THR SEQRES 7 B 257 ILE ASN ASP GLY ALA TYR ALA THR MET MET LYS ARG VAL SEQRES 8 B 257 GLN ALA ASP ASN ASN PRO ASN PHE PHE PHE LEU THR TYR SEQRES 9 B 257 THR LYS ASN PHE GLU VAL ASN ASN PHE LEU VAL LEU PRO SEQRES 10 B 257 LYS GLN PHE VAL THR PRO LYS SER ILE ILE GLN ARG LYS SEQRES 11 B 257 PRO LEU ALA PRO THR ALA ASN ARG ALA GLY TRP ILE GLY SEQRES 12 B 257 CYS ASN ILE ASP LEU SER GLN VAL PRO SER LYS GLY ARG SEQRES 13 B 257 ILE PHE LEU VAL GLN ASP GLY GLN VAL ARG ASP PRO GLU SEQRES 14 B 257 LYS VAL THR LYS GLU PHE LYS GLN GLY LEU PHE LEU ARG SEQRES 15 B 257 LYS SER SER LEU SER SER ARG GLY TRP THR ILE GLU ILE SEQRES 16 B 257 LEU ASN CYS ILE ASP LYS ILE GLU GLY SER GLU PHE THR SEQRES 17 B 257 LEU GLU ASP MET TYR ARG PHE GLU SER ASP LEU LYS ASN SEQRES 18 B 257 ILE PHE VAL LYS ASN ASN HIS ILE LYS GLU LYS ILE ARG SEQRES 19 B 257 GLN GLN LEU GLN ILE LEU ARG ASP LYS GLU ILE ILE GLU SEQRES 20 B 257 PHE LYS GLY ARG GLY LYS TYR ARG LYS LEU SEQRES 1 C 10 DC DT DG DG 6MA DT DC DC DA DG SEQRES 1 D 10 DC DT DG DG 6MA DT DC DC DA DG SEQRES 1 E 10 DC DT DG DG 6MA DT DC DC DA DG SEQRES 1 F 10 DC DT DG DG 6MA DT DC DC DA DG MODRES 4ESJ 6MA C 5 A MODRES 4ESJ 6MA D 5 A MODRES 4ESJ 6MA E 5 A MODRES 4ESJ 6MA F 5 A HET 6MA C 5 22 HET 6MA D 5 22 HET 6MA E 5 22 HET 6MA F 5 22 HET ZN A 301 1 HET ZN A 302 1 HET AZI A 303 3 HET ZN B 301 1 HET UNX C 101 1 HET GOL D 101 6 HET UNX D 102 1 HETNAM 6MA N6-METHYL-DEOXY-ADENOSINE-5'-MONOPHOSPHATE HETNAM ZN ZINC ION HETNAM AZI AZIDE ION HETNAM UNX UNKNOWN ATOM OR ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 6MA 4(C11 H16 N5 O6 P) FORMUL 7 ZN 3(ZN 2+) FORMUL 9 AZI N3 1- FORMUL 11 UNX 2(X) FORMUL 12 GOL C3 H8 O3 FORMUL 14 HOH *197(H2 O) HELIX 1 1 ASN A 6 TYR A 13 1 8 HELIX 2 2 GLN A 18 SER A 32 1 15 HELIX 3 3 TYR A 81 ALA A 90 1 10 HELIX 4 4 PRO A 114 VAL A 118 5 5 HELIX 5 5 THR A 119 LYS A 121 5 3 HELIX 6 6 SER A 146 VAL A 148 5 3 HELIX 7 7 PRO A 149 ARG A 153 5 5 HELIX 8 8 ASP A 164 GLY A 175 1 12 HELIX 9 9 LEU A 176 SER A 181 5 6 HELIX 10 10 SER A 182 ILE A 199 1 18 HELIX 11 11 LEU A 206 ARG A 211 1 6 HELIX 12 12 PHE A 212 PHE A 220 1 9 HELIX 13 13 HIS A 225 LYS A 240 1 16 HELIX 14 14 ASN B 6 TYR B 13 1 8 HELIX 15 15 GLN B 18 SER B 32 1 15 HELIX 16 16 TYR B 81 ALA B 90 1 10 HELIX 17 17 PRO B 114 VAL B 118 5 5 HELIX 18 18 THR B 119 LYS B 121 5 3 HELIX 19 19 SER B 146 VAL B 148 5 3 HELIX 20 20 PRO B 149 ARG B 153 5 5 HELIX 21 21 ASP B 164 GLY B 175 1 12 HELIX 22 22 LEU B 176 SER B 181 5 6 HELIX 23 23 SER B 182 ILE B 199 1 18 HELIX 24 24 LEU B 206 ARG B 211 1 6 HELIX 25 25 PHE B 212 PHE B 220 1 9 HELIX 26 26 HIS B 225 LYS B 240 1 16 SHEET 1 A 7 ASN A 43 HIS A 44 0 SHEET 2 A 7 ASP A 53 TYR A 55 -1 O TYR A 55 N ASN A 43 SHEET 3 A 7 GLU A 62 LYS A 69 -1 O PHE A 63 N PHE A 54 SHEET 4 A 7 ASN A 95 TYR A 101 1 O PHE A 97 N GLU A 64 SHEET 5 A 7 VAL A 107 LEU A 113 -1 O LEU A 113 N PHE A 96 SHEET 6 A 7 ILE A 154 GLN A 158 -1 O LEU A 156 N PHE A 110 SHEET 7 A 7 GLN A 161 VAL A 162 -1 O GLN A 161 N GLN A 158 SHEET 1 B 3 THR A 75 ALA A 80 0 SHEET 2 B 3 TRP A 138 ASP A 144 -1 O ILE A 143 N ILE A 76 SHEET 3 B 3 ILE A 123 LEU A 129 -1 N ARG A 126 O GLY A 140 SHEET 1 C 3 GLU A 203 THR A 205 0 SHEET 2 C 3 LYS A 250 LYS A 253 -1 O TYR A 251 N PHE A 204 SHEET 3 C 3 ILE A 243 PHE A 245 -1 N GLU A 244 O ARG A 252 SHEET 1 D 7 ASN B 43 HIS B 44 0 SHEET 2 D 7 PHE B 54 TYR B 55 -1 O TYR B 55 N ASN B 43 SHEET 3 D 7 GLU B 62 LYS B 69 -1 O PHE B 63 N PHE B 54 SHEET 4 D 7 ASN B 95 TYR B 101 1 O PHE B 97 N GLU B 64 SHEET 5 D 7 VAL B 107 LEU B 113 -1 O LEU B 113 N PHE B 96 SHEET 6 D 7 ILE B 154 GLN B 158 -1 O LEU B 156 N PHE B 110 SHEET 7 D 7 GLN B 161 VAL B 162 -1 O GLN B 161 N GLN B 158 SHEET 1 E 3 THR B 75 ALA B 80 0 SHEET 2 E 3 GLY B 140 ASP B 144 -1 O ILE B 143 N ILE B 76 SHEET 3 E 3 ILE B 123 GLN B 125 -1 N ILE B 124 O ASN B 142 SHEET 1 F 3 GLU B 203 THR B 205 0 SHEET 2 F 3 LYS B 250 LYS B 253 -1 O TYR B 251 N PHE B 204 SHEET 3 F 3 ILE B 243 PHE B 245 -1 N GLU B 244 O ARG B 252 LINK O3' DG C 4 P 6MA C 5 1555 1555 1.60 LINK O3' 6MA C 5 P DT C 6 1555 1555 1.60 LINK O3' DG D 4 P 6MA D 5 1555 1555 1.61 LINK O3' 6MA D 5 P DT D 6 1555 1555 1.61 LINK O3' DG E 4 P 6MA E 5 1555 1555 1.60 LINK O3' 6MA E 5 P DT E 6 1555 1555 1.61 LINK O3' DG F 4 P 6MA F 5 1555 1555 1.60 LINK O3' 6MA F 5 P DT F 6 1555 1555 1.61 LINK OE1 GLU A 2 ZN ZN A 302 1555 1555 1.77 LINK ND1 HIS A 4 ZN ZN A 302 1555 1555 2.12 LINK SG CYS A 34 ZN ZN A 301 1555 1555 2.33 LINK SG CYS A 37 ZN ZN A 301 1555 1555 2.31 LINK SG CYS A 56 ZN ZN A 301 1555 1555 2.29 LINK SG CYS A 59 ZN ZN A 301 1555 1555 2.28 LINK SG CYS B 34 ZN ZN B 301 1555 1555 2.25 LINK SG CYS B 37 ZN ZN B 301 1555 1555 2.25 LINK SG CYS B 56 ZN ZN B 301 1555 1555 2.27 LINK SG CYS B 59 ZN ZN B 301 1555 1555 2.26 CISPEP 1 ASN A 40 PRO A 41 0 -2.56 CISPEP 2 ASN B 40 PRO B 41 0 -14.32 CISPEP 3 ASN B 40 PRO B 41 0 -2.58 SITE 1 AC1 4 CYS A 34 CYS A 37 CYS A 56 CYS A 59 SITE 1 AC2 2 GLU A 2 HIS A 4 SITE 1 AC3 7 ASN A 6 ASP A 26 ARG A 30 TYR B 29 SITE 2 AC3 7 ASN B 43 HIS B 44 HOH B 427 SITE 1 AC4 4 CYS B 34 CYS B 37 CYS B 56 CYS B 59 SITE 1 AC5 6 SER A 15 SER A 17 HIS A 225 HOH A 479 SITE 2 AC5 6 GLU B 8 DT D 6 CRYST1 130.518 98.411 83.884 90.00 112.21 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007662 0.000000 0.003129 0.00000 SCALE2 0.000000 0.010161 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012877 0.00000