HEADER RNA BINDING PROTEIN 01-MAY-12 4EYT TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF TETRAHYMENA TELOMERASE TITLE 2 PROTEIN P65 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TELOMERASE ASSOCIATED PROTEIN P65; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: SEE REMARK 999; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA; SOURCE 3 ORGANISM_TAXID: 5911; SOURCE 4 GENE: TAP65; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET30 LIC KEYWDS RNA, LA PROTEIN, LARP7, RRM, XRRM, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.SINGH,Z.WANG,B.-K.KOO,A.PATEL,D.CASCIO,K.COLLINS,J.FEIGON REVDAT 5 13-SEP-23 4EYT 1 REMARK SEQADV REVDAT 4 26-JUL-17 4EYT 1 SOURCE REMARK REVDAT 3 01-AUG-12 4EYT 1 JRNL REVDAT 2 04-JUL-12 4EYT 1 JRNL REVDAT 1 20-JUN-12 4EYT 0 JRNL AUTH M.SINGH,Z.WANG,B.K.KOO,A.PATEL,D.CASCIO,K.COLLINS,J.FEIGON JRNL TITL STRUCTURAL BASIS FOR TELOMERASE RNA RECOGNITION AND RNP JRNL TITL 2 ASSEMBLY BY THE HOLOENZYME LA FAMILY PROTEIN P65. JRNL REF MOL.CELL V. 47 16 2012 JRNL REFN ISSN 1097-2765 JRNL PMID 22705372 JRNL DOI 10.1016/J.MOLCEL.2012.05.018 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 3 NUMBER OF REFLECTIONS : 36715 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1845 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 60.5663 - 7.3059 0.94 2688 166 0.2109 0.2163 REMARK 3 2 7.3059 - 5.8004 0.95 2735 166 0.2376 0.2883 REMARK 3 3 5.8004 - 5.0676 0.95 2727 138 0.2044 0.2276 REMARK 3 4 5.0676 - 4.6045 0.94 2710 138 0.1497 0.1941 REMARK 3 5 4.6045 - 4.2745 0.94 2754 131 0.1400 0.1954 REMARK 3 6 4.2745 - 4.0226 0.94 2769 126 0.1739 0.2246 REMARK 3 7 4.0226 - 3.8211 0.94 2703 129 0.2050 0.2898 REMARK 3 8 3.8211 - 3.6548 0.94 2684 142 0.2827 0.3016 REMARK 3 9 3.6548 - 3.5141 0.94 2680 178 0.2599 0.2936 REMARK 3 10 3.5141 - 3.3929 0.94 2799 96 0.2419 0.2720 REMARK 3 11 3.3929 - 3.2868 0.93 2658 174 0.2399 0.2614 REMARK 3 12 3.2868 - 3.1929 0.94 2683 138 0.2369 0.3347 REMARK 3 13 3.1929 - 3.1088 0.93 2672 140 0.2648 0.3211 REMARK 3 14 3.1088 - 3.0330 0.94 2714 139 0.2913 0.3589 REMARK 3 15 3.0330 - 2.9640 0.94 2752 140 0.2709 0.3846 REMARK 3 16 2.9640 - 2.9009 0.93 2713 118 0.2724 0.2921 REMARK 3 17 2.9009 - 2.8429 0.93 2680 110 0.2875 0.3590 REMARK 3 18 2.8429 - 2.7893 0.93 2642 163 0.2944 0.3804 REMARK 3 19 2.7893 - 2.7395 0.92 2624 166 0.3088 0.3622 REMARK 3 20 2.7395 - 2.6930 0.93 2689 149 0.3183 0.3677 REMARK 3 21 2.6930 - 2.6496 0.91 2628 154 0.3271 0.4462 REMARK 3 22 2.6496 - 2.6088 0.92 2684 141 0.3434 0.3581 REMARK 3 23 2.6088 - 2.5704 0.90 2595 105 0.3545 0.3759 REMARK 3 24 2.5704 - 2.5342 0.90 2627 159 0.3664 0.4538 REMARK 3 25 2.5342 - 2.5000 0.89 2545 147 0.3671 0.4199 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 62.57 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.47520 REMARK 3 B22 (A**2) : 0.12460 REMARK 3 B33 (A**2) : -2.59980 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.98940 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4997 REMARK 3 ANGLE : 1.192 6726 REMARK 3 CHIRALITY : 0.082 727 REMARK 3 PLANARITY : 0.004 875 REMARK 3 DIHEDRAL : 16.266 1913 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 27.7567 -32.7516 -7.7027 REMARK 3 T TENSOR REMARK 3 T11: 0.3180 T22: 0.1418 REMARK 3 T33: 0.6998 T12: 0.0045 REMARK 3 T13: -0.0307 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 1.6595 L22: 1.3383 REMARK 3 L33: 0.6243 L12: 0.1181 REMARK 3 L13: 0.5263 L23: 0.0599 REMARK 3 S TENSOR REMARK 3 S11: 0.1152 S12: 0.0221 S13: -0.2074 REMARK 3 S21: -0.1071 S22: -0.0338 S23: -0.3873 REMARK 3 S31: 0.0209 S32: 0.0388 S33: -0.0523 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36719 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 79.057 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.57700 REMARK 200 R SYM FOR SHELL (I) : 0.57700 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4ERD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M PHOSPHATE/CITRATE, 0.2 M LITHIUM REMARK 280 SULFATE, 20% W/V PEG1000, PH 4.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 78.09500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 78.09500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 465 HIS A 372 REMARK 465 HIS A 373 REMARK 465 SER A 374 REMARK 465 ILE A 375 REMARK 465 GLU A 520 REMARK 465 PHE A 521 REMARK 465 ARG A 522 REMARK 465 LYS A 523 REMARK 465 PHE A 524 REMARK 465 PHE A 525 REMARK 465 PHE A 526 REMARK 465 MET A 527 REMARK 465 LYS A 528 REMARK 465 LYS A 529 REMARK 465 GLN A 530 REMARK 465 GLN A 531 REMARK 465 LYS A 532 REMARK 465 LYS A 533 REMARK 465 GLN A 534 REMARK 465 ASN A 535 REMARK 465 ILE A 536 REMARK 465 THR A 537 REMARK 465 GLN A 538 REMARK 465 ASN A 539 REMARK 465 TYR A 540 REMARK 465 ASN A 541 REMARK 465 LYS A 542 REMARK 465 MET B 367 REMARK 465 HIS B 368 REMARK 465 HIS B 369 REMARK 465 HIS B 370 REMARK 465 HIS B 371 REMARK 465 HIS B 372 REMARK 465 HIS B 373 REMARK 465 SER B 374 REMARK 465 ILE B 375 REMARK 465 LYS B 376 REMARK 465 GLN B 377 REMARK 465 PHE B 524 REMARK 465 PHE B 525 REMARK 465 PHE B 526 REMARK 465 MET B 527 REMARK 465 LYS B 528 REMARK 465 LYS B 529 REMARK 465 GLN B 530 REMARK 465 GLN B 531 REMARK 465 LYS B 532 REMARK 465 LYS B 533 REMARK 465 GLN B 534 REMARK 465 ASN B 535 REMARK 465 ILE B 536 REMARK 465 THR B 537 REMARK 465 GLN B 538 REMARK 465 ASN B 539 REMARK 465 TYR B 540 REMARK 465 ASN B 541 REMARK 465 LYS B 542 REMARK 465 MET C 367 REMARK 465 HIS C 368 REMARK 465 HIS C 369 REMARK 465 HIS C 370 REMARK 465 HIS C 371 REMARK 465 HIS C 372 REMARK 465 HIS C 373 REMARK 465 SER C 374 REMARK 465 ILE C 375 REMARK 465 LYS C 376 REMARK 465 LYS C 523 REMARK 465 PHE C 524 REMARK 465 PHE C 525 REMARK 465 PHE C 526 REMARK 465 MET C 527 REMARK 465 LYS C 528 REMARK 465 LYS C 529 REMARK 465 GLN C 530 REMARK 465 GLN C 531 REMARK 465 LYS C 532 REMARK 465 LYS C 533 REMARK 465 GLN C 534 REMARK 465 ASN C 535 REMARK 465 ILE C 536 REMARK 465 THR C 537 REMARK 465 GLN C 538 REMARK 465 ASN C 539 REMARK 465 TYR C 540 REMARK 465 ASN C 541 REMARK 465 LYS C 542 REMARK 465 MET D 367 REMARK 465 HIS D 368 REMARK 465 HIS D 369 REMARK 465 HIS D 370 REMARK 465 HIS D 371 REMARK 465 HIS D 372 REMARK 465 HIS D 373 REMARK 465 SER D 374 REMARK 465 ILE D 375 REMARK 465 LYS D 376 REMARK 465 GLN D 377 REMARK 465 PHE D 525 REMARK 465 PHE D 526 REMARK 465 MET D 527 REMARK 465 LYS D 528 REMARK 465 LYS D 529 REMARK 465 GLN D 530 REMARK 465 GLN D 531 REMARK 465 LYS D 532 REMARK 465 LYS D 533 REMARK 465 GLN D 534 REMARK 465 ASN D 535 REMARK 465 ILE D 536 REMARK 465 THR D 537 REMARK 465 GLN D 538 REMARK 465 ASN D 539 REMARK 465 TYR D 540 REMARK 465 ASN D 541 REMARK 465 LYS D 542 REMARK 465 MET E 367 REMARK 465 HIS E 368 REMARK 465 HIS E 369 REMARK 465 HIS E 370 REMARK 465 HIS E 371 REMARK 465 HIS E 372 REMARK 465 HIS E 373 REMARK 465 SER E 374 REMARK 465 ILE E 375 REMARK 465 LYS E 376 REMARK 465 GLN E 377 REMARK 465 LYS E 523 REMARK 465 PHE E 524 REMARK 465 PHE E 525 REMARK 465 PHE E 526 REMARK 465 MET E 527 REMARK 465 LYS E 528 REMARK 465 LYS E 529 REMARK 465 GLN E 530 REMARK 465 GLN E 531 REMARK 465 LYS E 532 REMARK 465 LYS E 533 REMARK 465 GLN E 534 REMARK 465 ASN E 535 REMARK 465 ILE E 536 REMARK 465 THR E 537 REMARK 465 GLN E 538 REMARK 465 ASN E 539 REMARK 465 TYR E 540 REMARK 465 ASN E 541 REMARK 465 LYS E 542 REMARK 465 MET F 367 REMARK 465 HIS F 368 REMARK 465 HIS F 369 REMARK 465 HIS F 370 REMARK 465 HIS F 371 REMARK 465 HIS F 372 REMARK 465 HIS F 373 REMARK 465 SER F 374 REMARK 465 ILE F 375 REMARK 465 LYS F 376 REMARK 465 GLN F 377 REMARK 465 LYS F 523 REMARK 465 PHE F 524 REMARK 465 PHE F 525 REMARK 465 PHE F 526 REMARK 465 MET F 527 REMARK 465 LYS F 528 REMARK 465 LYS F 529 REMARK 465 GLN F 530 REMARK 465 GLN F 531 REMARK 465 LYS F 532 REMARK 465 LYS F 533 REMARK 465 GLN F 534 REMARK 465 ASN F 535 REMARK 465 ILE F 536 REMARK 465 THR F 537 REMARK 465 GLN F 538 REMARK 465 ASN F 539 REMARK 465 TYR F 540 REMARK 465 ASN F 541 REMARK 465 LYS F 542 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 LYS B 478 CE NZ REMARK 470 LYS C 478 CE NZ REMARK 470 ASN D 483 N REMARK 470 GLU D 504 CG CD OE1 OE2 REMARK 470 ILE E 411 CG1 CG2 CD1 REMARK 470 ASP E 412 CG OD1 OD2 REMARK 470 GLN E 461 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 378 29.02 81.46 REMARK 500 ASP A 412 110.36 -177.31 REMARK 500 ASN A 483 -76.11 -96.27 REMARK 500 PRO B 387 159.82 -44.63 REMARK 500 ASP B 412 48.55 36.42 REMARK 500 ASN C 378 65.60 -105.76 REMARK 500 ILE C 411 -87.91 -134.05 REMARK 500 ASP C 412 76.32 -110.56 REMARK 500 ASN C 483 45.27 -144.48 REMARK 500 GLU C 520 -46.75 -149.38 REMARK 500 TYR D 410 90.44 -67.36 REMARK 500 ASP D 412 -115.55 58.31 REMARK 500 ILE E 411 -64.78 -97.20 REMARK 500 ASP E 412 69.13 -155.56 REMARK 500 LEU E 480 117.06 -37.94 REMARK 500 PRO E 503 125.08 -37.24 REMARK 500 LYS E 517 -0.70 -140.53 REMARK 500 LEU F 479 93.51 -66.99 REMARK 500 LYS F 518 34.01 -93.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ERD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF P65 C-TERMINAL XRRM2 DOMAIN IN COMPLEX WITH REMARK 900 STEM IV OF TELOMERASE RNA REMARK 999 REMARK 999 SEQUENCE REMARK 999 PROTEIN CONSTRUCT COMPRISES THE C-TERMINAL XRRM2 DOMAIN OF P65 (UNP REMARK 999 RESIDUES 375-542) WITH THE LOOP (UNP RESIDUES 413-459) DELETED. DBREF 4EYT A 375 412 UNP Q6JXI6 Q6JXI6_TETTH 375 412 DBREF 4EYT A 460 542 UNP Q6JXI6 Q6JXI6_TETTH 460 542 DBREF 4EYT B 375 412 UNP Q6JXI6 Q6JXI6_TETTH 375 412 DBREF 4EYT B 460 542 UNP Q6JXI6 Q6JXI6_TETTH 460 542 DBREF 4EYT C 375 412 UNP Q6JXI6 Q6JXI6_TETTH 375 412 DBREF 4EYT C 460 542 UNP Q6JXI6 Q6JXI6_TETTH 460 542 DBREF 4EYT D 375 412 UNP Q6JXI6 Q6JXI6_TETTH 375 412 DBREF 4EYT D 460 542 UNP Q6JXI6 Q6JXI6_TETTH 460 542 DBREF 4EYT E 375 412 UNP Q6JXI6 Q6JXI6_TETTH 375 412 DBREF 4EYT E 460 542 UNP Q6JXI6 Q6JXI6_TETTH 460 542 DBREF 4EYT F 375 412 UNP Q6JXI6 Q6JXI6_TETTH 375 412 DBREF 4EYT F 460 542 UNP Q6JXI6 Q6JXI6_TETTH 460 542 SEQADV 4EYT MET A 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS A 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS A 369 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS A 370 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS A 371 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS A 372 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS A 373 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT SER A 374 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT MET B 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS B 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS B 369 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS B 370 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS B 371 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS B 372 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS B 373 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT SER B 374 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT MET C 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS C 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS C 369 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS C 370 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS C 371 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS C 372 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS C 373 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT SER C 374 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT MET D 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS D 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS D 369 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS D 370 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS D 371 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS D 372 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS D 373 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT SER D 374 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT MET E 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS E 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS E 369 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS E 370 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS E 371 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS E 372 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS E 373 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT SER E 374 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT MET F 367 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS F 368 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS F 369 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS F 370 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS F 371 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS F 372 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT HIS F 373 UNP Q6JXI6 EXPRESSION TAG SEQADV 4EYT SER F 374 UNP Q6JXI6 EXPRESSION TAG SEQRES 1 A 129 MET HIS HIS HIS HIS HIS HIS SER ILE LYS GLN ASN CYS SEQRES 2 A 129 LEU ILE LYS ILE ILE ASN ILE PRO GLN GLY THR LEU LYS SEQRES 3 A 129 ALA GLU VAL VAL LEU ALA VAL ARG HIS LEU GLY TYR GLU SEQRES 4 A 129 PHE TYR CYS ASP TYR ILE ASP GLY GLN ALA MET ILE ARG SEQRES 5 A 129 PHE GLN ASN SER ASP GLU GLN ARG LEU ALA ILE GLN LYS SEQRES 6 A 129 LEU LEU ASN HIS ASN ASN ASN LYS LEU GLN ILE GLU ILE SEQRES 7 A 129 ARG GLY GLN ILE CYS ASP VAL ILE SER THR ILE PRO GLU SEQRES 8 A 129 ASP GLU GLU LYS ASN TYR TRP ASN TYR ILE LYS PHE LYS SEQRES 9 A 129 LYS ASN GLU PHE ARG LYS PHE PHE PHE MET LYS LYS GLN SEQRES 10 A 129 GLN LYS LYS GLN ASN ILE THR GLN ASN TYR ASN LYS SEQRES 1 B 129 MET HIS HIS HIS HIS HIS HIS SER ILE LYS GLN ASN CYS SEQRES 2 B 129 LEU ILE LYS ILE ILE ASN ILE PRO GLN GLY THR LEU LYS SEQRES 3 B 129 ALA GLU VAL VAL LEU ALA VAL ARG HIS LEU GLY TYR GLU SEQRES 4 B 129 PHE TYR CYS ASP TYR ILE ASP GLY GLN ALA MET ILE ARG SEQRES 5 B 129 PHE GLN ASN SER ASP GLU GLN ARG LEU ALA ILE GLN LYS SEQRES 6 B 129 LEU LEU ASN HIS ASN ASN ASN LYS LEU GLN ILE GLU ILE SEQRES 7 B 129 ARG GLY GLN ILE CYS ASP VAL ILE SER THR ILE PRO GLU SEQRES 8 B 129 ASP GLU GLU LYS ASN TYR TRP ASN TYR ILE LYS PHE LYS SEQRES 9 B 129 LYS ASN GLU PHE ARG LYS PHE PHE PHE MET LYS LYS GLN SEQRES 10 B 129 GLN LYS LYS GLN ASN ILE THR GLN ASN TYR ASN LYS SEQRES 1 C 129 MET HIS HIS HIS HIS HIS HIS SER ILE LYS GLN ASN CYS SEQRES 2 C 129 LEU ILE LYS ILE ILE ASN ILE PRO GLN GLY THR LEU LYS SEQRES 3 C 129 ALA GLU VAL VAL LEU ALA VAL ARG HIS LEU GLY TYR GLU SEQRES 4 C 129 PHE TYR CYS ASP TYR ILE ASP GLY GLN ALA MET ILE ARG SEQRES 5 C 129 PHE GLN ASN SER ASP GLU GLN ARG LEU ALA ILE GLN LYS SEQRES 6 C 129 LEU LEU ASN HIS ASN ASN ASN LYS LEU GLN ILE GLU ILE SEQRES 7 C 129 ARG GLY GLN ILE CYS ASP VAL ILE SER THR ILE PRO GLU SEQRES 8 C 129 ASP GLU GLU LYS ASN TYR TRP ASN TYR ILE LYS PHE LYS SEQRES 9 C 129 LYS ASN GLU PHE ARG LYS PHE PHE PHE MET LYS LYS GLN SEQRES 10 C 129 GLN LYS LYS GLN ASN ILE THR GLN ASN TYR ASN LYS SEQRES 1 D 129 MET HIS HIS HIS HIS HIS HIS SER ILE LYS GLN ASN CYS SEQRES 2 D 129 LEU ILE LYS ILE ILE ASN ILE PRO GLN GLY THR LEU LYS SEQRES 3 D 129 ALA GLU VAL VAL LEU ALA VAL ARG HIS LEU GLY TYR GLU SEQRES 4 D 129 PHE TYR CYS ASP TYR ILE ASP GLY GLN ALA MET ILE ARG SEQRES 5 D 129 PHE GLN ASN SER ASP GLU GLN ARG LEU ALA ILE GLN LYS SEQRES 6 D 129 LEU LEU ASN HIS ASN ASN ASN LYS LEU GLN ILE GLU ILE SEQRES 7 D 129 ARG GLY GLN ILE CYS ASP VAL ILE SER THR ILE PRO GLU SEQRES 8 D 129 ASP GLU GLU LYS ASN TYR TRP ASN TYR ILE LYS PHE LYS SEQRES 9 D 129 LYS ASN GLU PHE ARG LYS PHE PHE PHE MET LYS LYS GLN SEQRES 10 D 129 GLN LYS LYS GLN ASN ILE THR GLN ASN TYR ASN LYS SEQRES 1 E 129 MET HIS HIS HIS HIS HIS HIS SER ILE LYS GLN ASN CYS SEQRES 2 E 129 LEU ILE LYS ILE ILE ASN ILE PRO GLN GLY THR LEU LYS SEQRES 3 E 129 ALA GLU VAL VAL LEU ALA VAL ARG HIS LEU GLY TYR GLU SEQRES 4 E 129 PHE TYR CYS ASP TYR ILE ASP GLY GLN ALA MET ILE ARG SEQRES 5 E 129 PHE GLN ASN SER ASP GLU GLN ARG LEU ALA ILE GLN LYS SEQRES 6 E 129 LEU LEU ASN HIS ASN ASN ASN LYS LEU GLN ILE GLU ILE SEQRES 7 E 129 ARG GLY GLN ILE CYS ASP VAL ILE SER THR ILE PRO GLU SEQRES 8 E 129 ASP GLU GLU LYS ASN TYR TRP ASN TYR ILE LYS PHE LYS SEQRES 9 E 129 LYS ASN GLU PHE ARG LYS PHE PHE PHE MET LYS LYS GLN SEQRES 10 E 129 GLN LYS LYS GLN ASN ILE THR GLN ASN TYR ASN LYS SEQRES 1 F 129 MET HIS HIS HIS HIS HIS HIS SER ILE LYS GLN ASN CYS SEQRES 2 F 129 LEU ILE LYS ILE ILE ASN ILE PRO GLN GLY THR LEU LYS SEQRES 3 F 129 ALA GLU VAL VAL LEU ALA VAL ARG HIS LEU GLY TYR GLU SEQRES 4 F 129 PHE TYR CYS ASP TYR ILE ASP GLY GLN ALA MET ILE ARG SEQRES 5 F 129 PHE GLN ASN SER ASP GLU GLN ARG LEU ALA ILE GLN LYS SEQRES 6 F 129 LEU LEU ASN HIS ASN ASN ASN LYS LEU GLN ILE GLU ILE SEQRES 7 F 129 ARG GLY GLN ILE CYS ASP VAL ILE SER THR ILE PRO GLU SEQRES 8 F 129 ASP GLU GLU LYS ASN TYR TRP ASN TYR ILE LYS PHE LYS SEQRES 9 F 129 LYS ASN GLU PHE ARG LYS PHE PHE PHE MET LYS LYS GLN SEQRES 10 F 129 GLN LYS LYS GLN ASN ILE THR GLN ASN TYR ASN LYS HET SO4 B 601 5 HETNAM SO4 SULFATE ION FORMUL 7 SO4 O4 S 2- FORMUL 8 HOH *10(H2 O) HELIX 1 1 LEU A 391 HIS A 401 1 11 HELIX 2 2 ASN A 468 LEU A 479 1 12 HELIX 3 3 PRO A 503 LYS A 518 1 16 HELIX 4 4 LEU B 391 ARG B 400 1 10 HELIX 5 5 HIS B 401 GLY B 403 5 3 HELIX 6 6 ASN B 468 ASN B 483 1 16 HELIX 7 7 PRO B 503 LYS B 518 1 16 HELIX 8 8 LEU C 391 HIS C 401 1 11 HELIX 9 9 ASN C 468 HIS C 482 1 15 HELIX 10 10 PRO C 503 ASN C 519 1 17 HELIX 11 11 LEU D 391 HIS D 401 1 11 HELIX 12 12 ASN D 468 LEU D 480 1 13 HELIX 13 13 PRO D 503 LYS D 518 1 16 HELIX 14 14 LEU E 391 HIS E 401 1 11 HELIX 15 15 ASN E 468 LEU E 480 1 13 HELIX 16 16 PRO E 503 ASN E 509 1 7 HELIX 17 17 ASN E 509 ASN E 519 1 11 HELIX 18 18 LEU F 391 HIS F 401 1 11 HELIX 19 19 ASN F 468 LEU F 479 1 12 HELIX 20 20 PRO F 503 LYS F 518 1 16 SHEET 1 A 6 PHE A 406 TYR A 410 0 SHEET 2 A 6 ALA A 462 PHE A 466 -1 O ARG A 465 N TYR A 407 SHEET 3 A 6 LEU A 380 ILE A 384 -1 N ILE A 381 O ILE A 464 SHEET 4 A 6 GLN A 494 ILE A 499 -1 O ILE A 499 N LYS A 382 SHEET 5 A 6 LYS A 486 ILE A 491 -1 N ILE A 489 O CYS A 496 SHEET 6 A 6 LEU A 480 ASN A 481 -1 N ASN A 481 O LYS A 486 SHEET 1 B 5 PHE B 406 ASP B 409 0 SHEET 2 B 5 ALA B 462 PHE B 466 -1 O ARG B 465 N TYR B 407 SHEET 3 B 5 LEU B 380 ILE B 384 -1 N ILE B 383 O ALA B 462 SHEET 4 B 5 GLN B 494 ILE B 499 -1 O ILE B 499 N LYS B 382 SHEET 5 B 5 GLN B 488 ILE B 491 -1 N ILE B 489 O CYS B 496 SHEET 1 C 5 PHE C 406 TYR C 410 0 SHEET 2 C 5 ALA C 462 PHE C 466 -1 O ARG C 465 N TYR C 407 SHEET 3 C 5 LEU C 380 ILE C 384 -1 N ILE C 381 O ILE C 464 SHEET 4 C 5 GLN C 494 ILE C 499 -1 O ASP C 497 N ILE C 384 SHEET 5 C 5 GLN C 488 ILE C 491 -1 N ILE C 489 O CYS C 496 SHEET 1 D 5 PHE D 406 ILE D 411 0 SHEET 2 D 5 GLN D 461 PHE D 466 -1 O MET D 463 N ASP D 409 SHEET 3 D 5 LEU D 380 ILE D 384 -1 N ILE D 383 O ALA D 462 SHEET 4 D 5 GLN D 494 ILE D 499 -1 O ASP D 497 N ILE D 384 SHEET 5 D 5 GLN D 488 ILE D 491 -1 N ILE D 489 O CYS D 496 SHEET 1 E 5 PHE E 406 TYR E 410 0 SHEET 2 E 5 ALA E 462 PHE E 466 -1 O MET E 463 N ASP E 409 SHEET 3 E 5 LEU E 380 ILE E 384 -1 N ILE E 383 O ALA E 462 SHEET 4 E 5 GLN E 494 ILE E 499 -1 O ASP E 497 N ILE E 384 SHEET 5 E 5 GLN E 488 ILE E 491 -1 N ILE E 489 O CYS E 496 SHEET 1 F 5 PHE F 406 TYR F 410 0 SHEET 2 F 5 ALA F 462 PHE F 466 -1 O ARG F 465 N TYR F 407 SHEET 3 F 5 LEU F 380 ILE F 384 -1 N ILE F 381 O ILE F 464 SHEET 4 F 5 GLN F 494 ILE F 499 -1 O ASP F 497 N ILE F 384 SHEET 5 F 5 GLN F 488 ILE F 491 -1 N ILE F 489 O CYS F 496 SITE 1 AC1 4 HIS B 401 HIS B 482 HOH B 704 LYS D 486 CRYST1 156.190 91.900 82.830 90.00 107.36 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006402 0.000000 0.002002 0.00000 SCALE2 0.000000 0.010881 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012649 0.00000