HEADER OXIDOREDUCTASE 01-MAY-12 4EYU TITLE THE FREE STRUCTURE OF THE MOUSE C-TERMINAL DOMAIN OF KDM6B COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 6B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1155-1641; COMPND 5 SYNONYM: JMJC DOMAIN-CONTAINING PROTEIN 3, JUMONJI DOMAIN-CONTAINING COMPND 6 PROTEIN 3; COMPND 7 EC: 1.14.11.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KDM6B, JMJD3, KIAA0346; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 SUMO KEYWDS JMJC DOMAIN, HISTONE K27 TRIMETHYL AND DIMETHYL DEMETHYLASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.J.CHENG,D.J.PATEL REVDAT 5 28-FEB-24 4EYU 1 REMARK LINK REVDAT 4 09-AUG-17 4EYU 1 SOURCE AUTHOR REMARK REVDAT 3 29-AUG-12 4EYU 1 JRNL REVDAT 2 15-AUG-12 4EYU 1 JRNL REVDAT 1 08-AUG-12 4EYU 0 JRNL AUTH L.KRUIDENIER,C.W.CHUNG,Z.CHENG,J.LIDDLE,K.CHE,G.JOBERTY, JRNL AUTH 2 M.BANTSCHEFF,C.BOUNTRA,A.BRIDGES,H.DIALLO,D.EBERHARD, JRNL AUTH 3 S.HUTCHINSON,E.JONES,R.KATSO,M.LEVERIDGE,P.K.MANDER, JRNL AUTH 4 J.MOSLEY,C.RAMIREZ-MOLINA,P.ROWLAND,C.J.SCHOFIELD, JRNL AUTH 5 R.J.SHEPPARD,J.E.SMITH,C.SWALES,R.TANNER,P.THOMAS,A.TUMBER, JRNL AUTH 6 G.DREWES,U.OPPERMANN,D.J.PATEL,K.LEE,D.M.WILSON JRNL TITL A SELECTIVE JUMONJI H3K27 DEMETHYLASE INHIBITOR MODULATES JRNL TITL 2 THE PROINFLAMMATORY MACROPHAGE RESPONSE. JRNL REF NATURE V. 488 404 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22842901 JRNL DOI 10.1038/NATURE11262 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 54823 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2767 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.4515 - 6.2268 0.99 2816 155 0.1904 0.2026 REMARK 3 2 6.2268 - 4.9457 1.00 2723 146 0.2059 0.2104 REMARK 3 3 4.9457 - 4.3215 1.00 2687 138 0.1598 0.1937 REMARK 3 4 4.3215 - 3.9268 1.00 2655 138 0.1732 0.2399 REMARK 3 5 3.9268 - 3.6456 1.00 2672 124 0.1981 0.2282 REMARK 3 6 3.6456 - 3.4308 0.99 2635 160 0.2143 0.2475 REMARK 3 7 3.4308 - 3.2591 1.00 2666 117 0.2151 0.2656 REMARK 3 8 3.2591 - 3.1173 1.00 2633 127 0.2325 0.2548 REMARK 3 9 3.1173 - 2.9973 1.00 2628 134 0.2354 0.2828 REMARK 3 10 2.9973 - 2.8939 0.99 2630 146 0.2393 0.2989 REMARK 3 11 2.8939 - 2.8035 1.00 2613 144 0.2540 0.2681 REMARK 3 12 2.8035 - 2.7234 0.99 2603 147 0.2723 0.3997 REMARK 3 13 2.7234 - 2.6517 0.99 2601 147 0.2821 0.3459 REMARK 3 14 2.6517 - 2.5870 1.00 2588 154 0.2918 0.3234 REMARK 3 15 2.5870 - 2.5282 0.99 2588 139 0.3193 0.3696 REMARK 3 16 2.5282 - 2.4744 0.97 2568 139 0.3435 0.3768 REMARK 3 17 2.4744 - 2.4249 0.97 2525 127 0.3498 0.4257 REMARK 3 18 2.4249 - 2.3792 0.97 2543 145 0.3748 0.3484 REMARK 3 19 2.3792 - 2.3367 0.96 2523 120 0.3859 0.4770 REMARK 3 20 2.3367 - 2.2971 0.83 2159 120 0.3890 0.4204 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 43.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.650 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -19.28970 REMARK 3 B22 (A**2) : 36.00110 REMARK 3 B33 (A**2) : -16.71140 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 7518 REMARK 3 ANGLE : 1.145 10240 REMARK 3 CHIRALITY : 0.068 1118 REMARK 3 PLANARITY : 0.006 1310 REMARK 3 DIHEDRAL : 15.258 2722 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1157:1203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3459 -16.3905 -38.2808 REMARK 3 T TENSOR REMARK 3 T11: 0.5305 T22: 0.6287 REMARK 3 T33: 0.4653 T12: -0.1472 REMARK 3 T13: -0.0267 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.3550 L22: 1.3153 REMARK 3 L33: 0.6983 L12: -1.0111 REMARK 3 L13: 0.1951 L23: -0.5610 REMARK 3 S TENSOR REMARK 3 S11: -0.1159 S12: 0.0221 S13: -0.5512 REMARK 3 S21: -0.1336 S22: 0.2621 S23: 0.1790 REMARK 3 S31: 0.5292 S32: 0.0340 S33: -0.1611 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 1204:1239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1403 3.3830 -45.0236 REMARK 3 T TENSOR REMARK 3 T11: 0.3752 T22: 0.6543 REMARK 3 T33: 0.2649 T12: -0.1292 REMARK 3 T13: 0.0269 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 2.8198 L22: 2.3912 REMARK 3 L33: 3.4527 L12: -1.3714 REMARK 3 L13: 0.3558 L23: -1.3028 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: 0.0762 S13: -0.0523 REMARK 3 S21: -0.2032 S22: 0.1466 S23: 0.1402 REMARK 3 S31: -0.2268 S32: -0.5851 S33: -0.1786 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 1240:1268 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8460 2.9059 -49.6284 REMARK 3 T TENSOR REMARK 3 T11: 0.4038 T22: 0.7796 REMARK 3 T33: 0.3855 T12: -0.2218 REMARK 3 T13: 0.0397 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 2.2516 L22: 1.5777 REMARK 3 L33: 1.8471 L12: -1.5776 REMARK 3 L13: 0.3692 L23: -0.9977 REMARK 3 S TENSOR REMARK 3 S11: 0.1738 S12: 0.2066 S13: 0.4868 REMARK 3 S21: -0.2852 S22: -0.1589 S23: -0.4517 REMARK 3 S31: -0.2193 S32: 0.8054 S33: 0.0537 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 1269:1298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8518 15.8470 -57.6518 REMARK 3 T TENSOR REMARK 3 T11: 0.6960 T22: 0.0458 REMARK 3 T33: 0.4532 T12: -0.4175 REMARK 3 T13: 0.0469 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.3450 L22: 1.8283 REMARK 3 L33: 0.6140 L12: 0.7084 REMARK 3 L13: 0.1782 L23: -0.0965 REMARK 3 S TENSOR REMARK 3 S11: -0.0801 S12: 0.3362 S13: 0.2094 REMARK 3 S21: -0.2933 S22: 0.2595 S23: 0.0221 REMARK 3 S31: -0.3699 S32: 0.2194 S33: 0.1502 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 1299:1374 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0373 7.2739 -36.8056 REMARK 3 T TENSOR REMARK 3 T11: 0.3411 T22: 0.4115 REMARK 3 T33: 0.2908 T12: -0.0627 REMARK 3 T13: 0.0221 T23: -0.0621 REMARK 3 L TENSOR REMARK 3 L11: 0.6243 L22: 0.7565 REMARK 3 L33: 4.3045 L12: -0.4738 REMARK 3 L13: 0.3161 L23: -0.8331 REMARK 3 S TENSOR REMARK 3 S11: 0.0090 S12: -0.4383 S13: 0.0293 REMARK 3 S21: 0.1337 S22: -0.0438 S23: 0.0394 REMARK 3 S31: -0.5177 S32: -0.0488 S33: -0.0712 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 1375:1503 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5085 -4.8284 -40.0428 REMARK 3 T TENSOR REMARK 3 T11: 0.2795 T22: 0.3571 REMARK 3 T33: 0.2711 T12: -0.1466 REMARK 3 T13: -0.0122 T23: -0.0152 REMARK 3 L TENSOR REMARK 3 L11: 2.0340 L22: 1.0145 REMARK 3 L33: 2.5577 L12: -1.0416 REMARK 3 L13: -0.0509 L23: -0.6487 REMARK 3 S TENSOR REMARK 3 S11: -0.0504 S12: -0.1442 S13: 0.0083 REMARK 3 S21: 0.0397 S22: 0.0218 S23: -0.0350 REMARK 3 S31: 0.0800 S32: 0.1725 S33: -0.0375 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 1504:1636 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5763 -0.6588 -9.4340 REMARK 3 T TENSOR REMARK 3 T11: 0.3356 T22: 0.8343 REMARK 3 T33: 0.3521 T12: -0.1539 REMARK 3 T13: -0.0127 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 2.2478 L22: 1.7319 REMARK 3 L33: 4.9719 L12: 0.4497 REMARK 3 L13: 0.4120 L23: 1.2671 REMARK 3 S TENSOR REMARK 3 S11: 0.0856 S12: -0.4459 S13: 0.2302 REMARK 3 S21: 0.1037 S22: -0.1567 S23: -0.0537 REMARK 3 S31: -0.0886 S32: 0.3566 S33: 0.0438 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 1157:1196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -42.0078 16.2392 -25.9582 REMARK 3 T TENSOR REMARK 3 T11: 0.5059 T22: 0.8726 REMARK 3 T33: 0.4900 T12: -0.2240 REMARK 3 T13: 0.0230 T23: -0.1468 REMARK 3 L TENSOR REMARK 3 L11: 1.2567 L22: 1.9580 REMARK 3 L33: 2.1970 L12: -0.7169 REMARK 3 L13: -0.1078 L23: -0.9856 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: -0.1381 S13: 0.3474 REMARK 3 S21: 0.1697 S22: 0.2432 S23: -0.1290 REMARK 3 S31: -0.3963 S32: -0.0546 S33: -0.2020 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 1197:1228 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.3608 6.0706 -21.3539 REMARK 3 T TENSOR REMARK 3 T11: 0.3906 T22: 1.0435 REMARK 3 T33: 0.3614 T12: -0.1045 REMARK 3 T13: 0.0481 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 1.7584 L22: 3.9350 REMARK 3 L33: 1.7330 L12: -0.0780 REMARK 3 L13: 0.0000 L23: -1.5368 REMARK 3 S TENSOR REMARK 3 S11: 0.0681 S12: -0.1750 S13: 0.1883 REMARK 3 S21: 0.3132 S22: 0.2603 S23: 0.2217 REMARK 3 S31: -0.0823 S32: -0.7608 S33: -0.4359 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN B AND RESID 1229:1257 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.5985 -10.4239 -15.8928 REMARK 3 T TENSOR REMARK 3 T11: 0.3807 T22: 0.8189 REMARK 3 T33: 0.3502 T12: -0.0667 REMARK 3 T13: 0.0293 T23: -0.0692 REMARK 3 L TENSOR REMARK 3 L11: 3.4689 L22: 2.4183 REMARK 3 L33: 2.6138 L12: 0.9932 REMARK 3 L13: 0.6500 L23: -0.9013 REMARK 3 S TENSOR REMARK 3 S11: 0.0723 S12: -0.1643 S13: -0.3400 REMARK 3 S21: -0.0113 S22: 0.0928 S23: -0.0918 REMARK 3 S31: 0.3057 S32: 0.0538 S33: -0.2055 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 1258:1297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.8327 -11.1757 -10.0358 REMARK 3 T TENSOR REMARK 3 T11: 0.3566 T22: 0.8297 REMARK 3 T33: 0.3350 T12: -0.0590 REMARK 3 T13: 0.0243 T23: -0.0758 REMARK 3 L TENSOR REMARK 3 L11: 2.2741 L22: 3.3678 REMARK 3 L33: 1.7183 L12: 0.7987 REMARK 3 L13: 0.3059 L23: -1.3767 REMARK 3 S TENSOR REMARK 3 S11: -0.0289 S12: -0.2509 S13: -0.1292 REMARK 3 S21: 0.2230 S22: 0.2295 S23: -0.1683 REMARK 3 S31: -0.0183 S32: 0.2401 S33: -0.1082 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 1298:1374 ) REMARK 3 ORIGIN FOR THE GROUP (A): -45.5031 -7.4093 -27.4982 REMARK 3 T TENSOR REMARK 3 T11: 0.4392 T22: 0.8998 REMARK 3 T33: 0.4244 T12: -0.2864 REMARK 3 T13: 0.0083 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 1.3706 L22: 2.0998 REMARK 3 L33: 4.2343 L12: -0.9401 REMARK 3 L13: -0.4475 L23: -1.6409 REMARK 3 S TENSOR REMARK 3 S11: -0.1282 S12: 0.1625 S13: -0.0618 REMARK 3 S21: -0.0172 S22: 0.1457 S23: 0.1344 REMARK 3 S31: 0.4510 S32: -0.2663 S33: 0.0003 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 1375:1503 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.0149 4.7673 -24.3472 REMARK 3 T TENSOR REMARK 3 T11: 0.3581 T22: 0.8227 REMARK 3 T33: 0.3876 T12: -0.1530 REMARK 3 T13: 0.0264 T23: -0.0687 REMARK 3 L TENSOR REMARK 3 L11: 1.4263 L22: 0.9361 REMARK 3 L33: 2.5560 L12: -0.1338 REMARK 3 L13: 0.6189 L23: -0.5783 REMARK 3 S TENSOR REMARK 3 S11: -0.0448 S12: -0.0878 S13: 0.1230 REMARK 3 S21: -0.0153 S22: 0.1189 S23: -0.0672 REMARK 3 S31: -0.1524 S32: -0.0874 S33: -0.0345 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 1504:1589 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.3205 1.7006 -53.2272 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.7277 REMARK 3 T33: 0.3697 T12: -0.1538 REMARK 3 T13: -0.0007 T23: 0.0770 REMARK 3 L TENSOR REMARK 3 L11: 1.7458 L22: 1.5981 REMARK 3 L33: 4.4083 L12: -1.4751 REMARK 3 L13: -0.6595 L23: 1.4412 REMARK 3 S TENSOR REMARK 3 S11: 0.1155 S12: 0.3008 S13: -0.0876 REMARK 3 S21: -0.0500 S22: -0.1470 S23: -0.0444 REMARK 3 S31: -0.0968 S32: 0.2662 S33: 0.0750 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 1594:1638 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.3771 -1.5586 -58.1316 REMARK 3 T TENSOR REMARK 3 T11: 0.3410 T22: 0.8857 REMARK 3 T33: 0.3445 T12: -0.0692 REMARK 3 T13: 0.0290 T23: 0.1039 REMARK 3 L TENSOR REMARK 3 L11: 0.3106 L22: 1.0323 REMARK 3 L33: 3.5064 L12: 0.4680 REMARK 3 L13: 0.2550 L23: 0.2976 REMARK 3 S TENSOR REMARK 3 S11: -0.0966 S12: 0.1133 S13: -0.2100 REMARK 3 S21: 0.0809 S22: -0.0090 S23: -0.0683 REMARK 3 S31: 0.3729 S32: 0.2921 S33: 0.0052 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 1155:1168 OR RESSEQ REMARK 3 1321:1565 OR RESSEQ 1567:1589 OR RESSEQ REMARK 3 1596:1636 ) AND (NOT ELEMENT H) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 1155:1168 OR RESSEQ REMARK 3 1321:1565 OR RESSEQ 1567:1589 OR RESSEQ REMARK 3 1596:1636 ) AND (NOT ELEMENT H) REMARK 3 ATOM PAIRS NUMBER : 2609 REMARK 3 RMSD : 0.064 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072240. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55090 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.297 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% METHANOL, 6% MPD, 5% PEG 4K, 5% REMARK 280 GLYCEROL, HEPES PH 8.2, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.48850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.65100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.14200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.65100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.48850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.14200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1303 REMARK 465 PRO A 1304 REMARK 465 THR A 1305 REMARK 465 LYS A 1306 REMARK 465 ALA A 1307 REMARK 465 ALA A 1308 REMARK 465 ARG A 1309 REMARK 465 LYS A 1310 REMARK 465 SER A 1311 REMARK 465 ALA A 1312 REMARK 465 PRO A 1313 REMARK 465 ALA A 1314 REMARK 465 THR A 1315 REMARK 465 GLY A 1316 REMARK 465 GLY A 1317 REMARK 465 GLY A 1318 REMARK 465 SER A 1319 REMARK 465 SER A 1320 REMARK 465 GLY A 1321 REMARK 465 SER A 1322 REMARK 465 ASN A 1592 REMARK 465 GLY A 1593 REMARK 465 SER A 1594 REMARK 465 ARG A 1595 REMARK 465 ASN A 1596 REMARK 465 ALA A 1639 REMARK 465 SER A 1640 REMARK 465 THR A 1641 REMARK 465 SER A 1642 REMARK 465 ARG A 1643 REMARK 465 THR B 1172 REMARK 465 GLU B 1173 REMARK 465 GLN B 1302 REMARK 465 GLY B 1303 REMARK 465 PRO B 1304 REMARK 465 THR B 1305 REMARK 465 LYS B 1306 REMARK 465 ALA B 1307 REMARK 465 ALA B 1308 REMARK 465 ARG B 1309 REMARK 465 LYS B 1310 REMARK 465 SER B 1311 REMARK 465 ALA B 1312 REMARK 465 PRO B 1313 REMARK 465 ALA B 1314 REMARK 465 THR B 1315 REMARK 465 GLY B 1316 REMARK 465 GLY B 1317 REMARK 465 GLY B 1318 REMARK 465 SER B 1319 REMARK 465 SER B 1320 REMARK 465 GLY B 1321 REMARK 465 SER B 1322 REMARK 465 ASN B 1592 REMARK 465 GLY B 1593 REMARK 465 SER B 1594 REMARK 465 ARG B 1595 REMARK 465 ASN B 1596 REMARK 465 ALA B 1639 REMARK 465 SER B 1640 REMARK 465 THR B 1641 REMARK 465 SER B 1642 REMARK 465 ARG B 1643 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B1294 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 1194 O ASN B 1576 2.14 REMARK 500 NH2 ARG B 1566 O GLU B 1570 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1252 175.08 -55.97 REMARK 500 MET A1373 -66.90 -106.57 REMARK 500 ASN A1394 28.60 49.39 REMARK 500 ARG A1556 50.37 -95.03 REMARK 500 ALA A1572 175.64 -58.18 REMARK 500 ASN A1584 -57.23 74.27 REMARK 500 THR A1624 -38.28 -37.56 REMARK 500 ASN B1182 74.57 -116.84 REMARK 500 PRO B1252 173.84 -57.36 REMARK 500 ASP B1258 -175.23 -68.68 REMARK 500 MET B1373 -67.10 -106.24 REMARK 500 ASN B1394 28.44 49.80 REMARK 500 ARG B1556 49.41 -93.84 REMARK 500 ASN B1584 -124.78 62.20 REMARK 500 LEU B1613 4.78 87.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1701 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1390 NE2 REMARK 620 2 GLU A1392 OE2 108.2 REMARK 620 3 HIS A1470 NE2 104.6 85.4 REMARK 620 4 OGA A1700 O2 162.4 82.4 90.1 REMARK 620 5 OGA A1700 O2' 87.0 158.8 105.6 79.6 REMARK 620 6 HOH A1827 O 88.3 88.4 166.9 77.6 77.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1575 SG REMARK 620 2 CYS A1578 SG 112.2 REMARK 620 3 CYS A1602 SG 124.2 107.3 REMARK 620 4 CYS A1605 SG 97.8 111.7 102.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1701 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1390 NE2 REMARK 620 2 GLU B1392 OE2 107.3 REMARK 620 3 HIS B1470 NE2 104.3 80.5 REMARK 620 4 OGA B1700 O2 156.0 82.2 98.9 REMARK 620 5 OGA B1700 O2' 85.2 160.7 111.3 80.9 REMARK 620 6 HOH B1832 O 80.1 94.9 174.4 77.2 72.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1575 SG REMARK 620 2 CYS B1578 SG 110.6 REMARK 620 3 CYS B1602 SG 122.1 106.4 REMARK 620 4 CYS B1605 SG 99.4 114.9 103.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OGA A 1700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OGA B 1700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ASK RELATED DB: PDB REMARK 900 KDM6B STRUCTURE BOUND WITH A HIGHLY SPECIFIC INHIBITOR REMARK 900 RELATED ID: 4EZ4 RELATED DB: PDB REMARK 900 RELATED ID: 4EZH RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 REPLACEMENT OF THE ORIGINAL LOOP SEQUENCE OF REMARK 999 ESEDEESEEPDSTTGTSPSSAPDPKN(RESIDUES 1296-1322) WITH RESIDUES OF REMARK 999 LEVLFQGPTKAARKSAPATGGGSSGS. DBREF 4EYU A 1157 1295 UNP Q5NCY0 KDM6B_MOUSE 1155 1293 DBREF 4EYU A 1323 1643 UNP Q5NCY0 KDM6B_MOUSE 1321 1641 DBREF 4EYU B 1157 1295 UNP Q5NCY0 KDM6B_MOUSE 1155 1293 DBREF 4EYU B 1323 1643 UNP Q5NCY0 KDM6B_MOUSE 1321 1641 SEQADV 4EYU LEU A 1296 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLU A 1297 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU VAL A 1298 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LEU A 1299 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU PHE A 1300 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLN A 1301 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY A 1303 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU PRO A 1304 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU THR A 1305 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LYS A 1306 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA A 1307 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA A 1308 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ARG A 1309 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LYS A 1310 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER A 1311 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA A 1312 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU PRO A 1313 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA A 1314 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU THR A 1315 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY A 1316 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY A 1317 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY A 1318 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER A 1319 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER A 1320 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY A 1321 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER A 1322 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LEU B 1296 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLU B 1297 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU VAL B 1298 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LEU B 1299 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU PHE B 1300 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLN B 1302 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY B 1303 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU PRO B 1304 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU THR B 1305 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LYS B 1306 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA B 1307 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA B 1308 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ARG B 1309 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU LYS B 1310 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER B 1311 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA B 1312 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU PRO B 1313 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU ALA B 1314 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU THR B 1315 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY B 1316 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY B 1317 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY B 1318 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER B 1319 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER B 1320 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU GLY B 1321 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EYU SER B 1322 UNP Q5NCY0 SEE REMARK 999 SEQRES 1 A 486 GLU SER TYR LEU SER PRO ALA GLN SER VAL LYS PRO LYS SEQRES 2 A 486 ILE ASN THR GLU GLU LYS LEU PRO ARG GLU LYS LEU ASN SEQRES 3 A 486 PRO PRO THR PRO SER ILE TYR LEU GLU SER LYS ARG ASP SEQRES 4 A 486 ALA PHE SER PRO VAL LEU LEU GLN PHE CYS THR ASP PRO SEQRES 5 A 486 ARG ASN PRO ILE THR VAL ILE ARG GLY LEU ALA GLY SER SEQRES 6 A 486 LEU ARG LEU ASN LEU GLY LEU PHE SER THR LYS THR LEU SEQRES 7 A 486 VAL GLU ALA SER GLY GLU HIS THR VAL GLU VAL ARG THR SEQRES 8 A 486 GLN VAL GLN GLN PRO SER ASP GLU ASN TRP ASP LEU THR SEQRES 9 A 486 GLY THR ARG GLN ILE TRP PRO CYS GLU SER SER ARG SER SEQRES 10 A 486 HIS THR THR ILE ALA LYS TYR ALA GLN TYR GLN ALA SER SEQRES 11 A 486 SER PHE GLN GLU SER LEU GLN GLU GLU LEU GLU VAL LEU SEQRES 12 A 486 PHE GLN GLY PRO THR LYS ALA ALA ARG LYS SER ALA PRO SEQRES 13 A 486 ALA THR GLY GLY GLY SER SER GLY SER HIS HIS ILE ILE SEQRES 14 A 486 LYS PHE GLY THR ASN ILE ASP LEU SER ASP ALA LYS ARG SEQRES 15 A 486 TRP LYS PRO GLN LEU GLN GLU LEU LEU LYS LEU PRO ALA SEQRES 16 A 486 PHE MET ARG VAL THR SER THR GLY ASN MET LEU SER HIS SEQRES 17 A 486 VAL GLY HIS THR ILE LEU GLY MET ASN THR VAL GLN LEU SEQRES 18 A 486 TYR MET LYS VAL PRO GLY SER ARG THR PRO GLY HIS GLN SEQRES 19 A 486 GLU ASN ASN ASN PHE CYS SER VAL ASN ILE ASN ILE GLY SEQRES 20 A 486 PRO GLY ASP CYS GLU TRP PHE ALA VAL HIS GLU HIS TYR SEQRES 21 A 486 TRP GLU THR ILE SER ALA PHE CYS ASP ARG HIS GLY VAL SEQRES 22 A 486 ASP TYR LEU THR GLY SER TRP TRP PRO ILE LEU ASP ASP SEQRES 23 A 486 LEU TYR ALA SER ASN ILE PRO VAL TYR ARG PHE VAL GLN SEQRES 24 A 486 ARG PRO GLY ASP LEU VAL TRP ILE ASN ALA GLY THR VAL SEQRES 25 A 486 HIS TRP VAL GLN ALA THR GLY TRP CYS ASN ASN ILE ALA SEQRES 26 A 486 TRP ASN VAL GLY PRO LEU THR ALA TYR GLN TYR GLN LEU SEQRES 27 A 486 ALA LEU GLU ARG TYR GLU TRP ASN GLU VAL LYS ASN VAL SEQRES 28 A 486 LYS SER ILE VAL PRO MET ILE HIS VAL SER TRP ASN VAL SEQRES 29 A 486 ALA ARG THR VAL LYS ILE SER ASP PRO ASP LEU PHE LYS SEQRES 30 A 486 MET ILE LYS PHE CYS LEU LEU GLN SER MET LYS HIS CYS SEQRES 31 A 486 GLN VAL GLN ARG GLU SER LEU VAL ARG ALA GLY LYS LYS SEQRES 32 A 486 ILE ALA TYR GLN GLY ARG VAL LYS ASP GLU PRO ALA TYR SEQRES 33 A 486 TYR CYS ASN GLU CYS ASP VAL GLU VAL PHE ASN ILE LEU SEQRES 34 A 486 PHE VAL THR SER GLU ASN GLY SER ARG ASN THR TYR LEU SEQRES 35 A 486 VAL HIS CYS GLU GLY CYS ALA ARG ARG ARG SER ALA GLY SEQRES 36 A 486 LEU GLN GLY VAL VAL VAL LEU GLU GLN TYR ARG THR GLU SEQRES 37 A 486 GLU LEU ALA GLN ALA TYR ASP ALA PHE THR LEU ALA PRO SEQRES 38 A 486 ALA SER THR SER ARG SEQRES 1 B 486 GLU SER TYR LEU SER PRO ALA GLN SER VAL LYS PRO LYS SEQRES 2 B 486 ILE ASN THR GLU GLU LYS LEU PRO ARG GLU LYS LEU ASN SEQRES 3 B 486 PRO PRO THR PRO SER ILE TYR LEU GLU SER LYS ARG ASP SEQRES 4 B 486 ALA PHE SER PRO VAL LEU LEU GLN PHE CYS THR ASP PRO SEQRES 5 B 486 ARG ASN PRO ILE THR VAL ILE ARG GLY LEU ALA GLY SER SEQRES 6 B 486 LEU ARG LEU ASN LEU GLY LEU PHE SER THR LYS THR LEU SEQRES 7 B 486 VAL GLU ALA SER GLY GLU HIS THR VAL GLU VAL ARG THR SEQRES 8 B 486 GLN VAL GLN GLN PRO SER ASP GLU ASN TRP ASP LEU THR SEQRES 9 B 486 GLY THR ARG GLN ILE TRP PRO CYS GLU SER SER ARG SER SEQRES 10 B 486 HIS THR THR ILE ALA LYS TYR ALA GLN TYR GLN ALA SER SEQRES 11 B 486 SER PHE GLN GLU SER LEU GLN GLU GLU LEU GLU VAL LEU SEQRES 12 B 486 PHE GLN GLY PRO THR LYS ALA ALA ARG LYS SER ALA PRO SEQRES 13 B 486 ALA THR GLY GLY GLY SER SER GLY SER HIS HIS ILE ILE SEQRES 14 B 486 LYS PHE GLY THR ASN ILE ASP LEU SER ASP ALA LYS ARG SEQRES 15 B 486 TRP LYS PRO GLN LEU GLN GLU LEU LEU LYS LEU PRO ALA SEQRES 16 B 486 PHE MET ARG VAL THR SER THR GLY ASN MET LEU SER HIS SEQRES 17 B 486 VAL GLY HIS THR ILE LEU GLY MET ASN THR VAL GLN LEU SEQRES 18 B 486 TYR MET LYS VAL PRO GLY SER ARG THR PRO GLY HIS GLN SEQRES 19 B 486 GLU ASN ASN ASN PHE CYS SER VAL ASN ILE ASN ILE GLY SEQRES 20 B 486 PRO GLY ASP CYS GLU TRP PHE ALA VAL HIS GLU HIS TYR SEQRES 21 B 486 TRP GLU THR ILE SER ALA PHE CYS ASP ARG HIS GLY VAL SEQRES 22 B 486 ASP TYR LEU THR GLY SER TRP TRP PRO ILE LEU ASP ASP SEQRES 23 B 486 LEU TYR ALA SER ASN ILE PRO VAL TYR ARG PHE VAL GLN SEQRES 24 B 486 ARG PRO GLY ASP LEU VAL TRP ILE ASN ALA GLY THR VAL SEQRES 25 B 486 HIS TRP VAL GLN ALA THR GLY TRP CYS ASN ASN ILE ALA SEQRES 26 B 486 TRP ASN VAL GLY PRO LEU THR ALA TYR GLN TYR GLN LEU SEQRES 27 B 486 ALA LEU GLU ARG TYR GLU TRP ASN GLU VAL LYS ASN VAL SEQRES 28 B 486 LYS SER ILE VAL PRO MET ILE HIS VAL SER TRP ASN VAL SEQRES 29 B 486 ALA ARG THR VAL LYS ILE SER ASP PRO ASP LEU PHE LYS SEQRES 30 B 486 MET ILE LYS PHE CYS LEU LEU GLN SER MET LYS HIS CYS SEQRES 31 B 486 GLN VAL GLN ARG GLU SER LEU VAL ARG ALA GLY LYS LYS SEQRES 32 B 486 ILE ALA TYR GLN GLY ARG VAL LYS ASP GLU PRO ALA TYR SEQRES 33 B 486 TYR CYS ASN GLU CYS ASP VAL GLU VAL PHE ASN ILE LEU SEQRES 34 B 486 PHE VAL THR SER GLU ASN GLY SER ARG ASN THR TYR LEU SEQRES 35 B 486 VAL HIS CYS GLU GLY CYS ALA ARG ARG ARG SER ALA GLY SEQRES 36 B 486 LEU GLN GLY VAL VAL VAL LEU GLU GLN TYR ARG THR GLU SEQRES 37 B 486 GLU LEU ALA GLN ALA TYR ASP ALA PHE THR LEU ALA PRO SEQRES 38 B 486 ALA SER THR SER ARG HET OGA A1700 10 HET NI A1701 1 HET ZN A1702 1 HET OGA B1700 10 HET NI B1701 1 HET ZN B1702 1 HETNAM OGA N-OXALYLGLYCINE HETNAM NI NICKEL (II) ION HETNAM ZN ZINC ION FORMUL 3 OGA 2(C4 H5 N O5) FORMUL 4 NI 2(NI 2+) FORMUL 5 ZN 2(ZN 2+) FORMUL 9 HOH *178(H2 O) HELIX 1 1 SER A 1161 SER A 1165 5 5 HELIX 2 2 PRO A 1177 ASN A 1182 1 6 HELIX 3 3 SER A 1192 PHE A 1197 5 6 HELIX 4 4 SER A 1198 THR A 1206 1 9 HELIX 5 5 GLY A 1217 ARG A 1223 1 7 HELIX 6 6 ASN A 1225 PHE A 1229 5 5 HELIX 7 7 SER A 1230 SER A 1238 1 9 HELIX 8 8 ILE A 1277 GLN A 1301 1 25 HELIX 9 9 TRP A 1340 LEU A 1347 1 8 HELIX 10 10 LEU A 1348 LEU A 1350 5 3 HELIX 11 11 PRO A 1351 ARG A 1355 5 5 HELIX 12 12 ASN A 1361 VAL A 1366 5 6 HELIX 13 13 GLU A 1392 PHE A 1396 5 5 HELIX 14 14 HIS A 1414 HIS A 1416 5 3 HELIX 15 15 TYR A 1417 HIS A 1428 1 12 HELIX 16 16 ILE A 1440 SER A 1447 1 8 HELIX 17 17 THR A 1489 LYS A 1506 1 18 HELIX 18 18 PRO A 1513 VAL A 1525 1 13 HELIX 19 19 ASP A 1529 ARG A 1556 1 28 HELIX 20 20 CYS A 1602 SER A 1610 1 9 HELIX 21 21 ARG A 1623 PHE A 1634 1 12 HELIX 22 22 SER B 1161 SER B 1165 5 5 HELIX 23 23 PRO B 1177 ASN B 1182 1 6 HELIX 24 24 SER B 1192 PHE B 1197 5 6 HELIX 25 25 SER B 1198 THR B 1206 1 9 HELIX 26 26 GLY B 1217 LEU B 1222 1 6 HELIX 27 27 ASN B 1225 PHE B 1229 5 5 HELIX 28 28 SER B 1230 SER B 1238 1 9 HELIX 29 29 ILE B 1277 PHE B 1300 1 24 HELIX 30 30 TRP B 1340 LEU B 1347 1 8 HELIX 31 31 LEU B 1348 LEU B 1350 5 3 HELIX 32 32 PRO B 1351 ARG B 1355 5 5 HELIX 33 33 ASN B 1361 VAL B 1366 5 6 HELIX 34 34 GLU B 1392 PHE B 1396 5 5 HELIX 35 35 HIS B 1414 HIS B 1416 5 3 HELIX 36 36 TYR B 1417 HIS B 1428 1 12 HELIX 37 37 ILE B 1440 SER B 1447 1 8 HELIX 38 38 THR B 1489 LYS B 1506 1 18 HELIX 39 39 PRO B 1513 VAL B 1525 1 13 HELIX 40 40 ASP B 1529 ARG B 1556 1 28 HELIX 41 41 CYS B 1602 SER B 1610 1 9 HELIX 42 42 ARG B 1623 PHE B 1634 1 12 SHEET 1 A 9 SER A1187 TYR A1189 0 SHEET 2 A 9 ILE A1212 ARG A1216 1 O ARG A1216 N ILE A1188 SHEET 3 A 9 LEU A1461 ILE A1464 -1 O LEU A1461 N ILE A1215 SHEET 4 A 9 CYS A1397 PRO A1405 -1 N ASN A1400 O VAL A1462 SHEET 5 A 9 CYS A1478 VAL A1485 -1 O ILE A1481 N ILE A1401 SHEET 6 A 9 GLN A1377 LYS A1381 -1 N TYR A1379 O ASN A1480 SHEET 7 A 9 ILE A1325 ASP A1333 -1 N GLY A1329 O MET A1380 SHEET 8 A 9 THR A1242 VAL A1249 -1 N GLU A1244 O THR A1330 SHEET 9 A 9 SER A1271 THR A1276 -1 O THR A1275 N VAL A1243 SHEET 1 B 4 ARG A1386 HIS A1390 0 SHEET 2 B 4 VAL A1469 ALA A1474 -1 O VAL A1472 N THR A1387 SHEET 3 B 4 CYS A1408 VAL A1413 -1 N GLU A1409 O GLN A1473 SHEET 4 B 4 TYR A1452 GLN A1456 -1 O GLN A1456 N CYS A1408 SHEET 1 C 4 ILE A1561 TYR A1563 0 SHEET 2 C 4 VAL A1617 GLU A1620 1 O GLU A1620 N ALA A1562 SHEET 3 C 4 ILE A1585 THR A1589 -1 N LEU A1586 O LEU A1619 SHEET 4 C 4 LEU A1599 HIS A1601 -1 O HIS A1601 N PHE A1587 SHEET 1 D 2 TYR A1573 TYR A1574 0 SHEET 2 D 2 GLU A1581 VAL A1582 -1 O VAL A1582 N TYR A1573 SHEET 1 E 9 SER B1187 TYR B1189 0 SHEET 2 E 9 ILE B1212 ARG B1216 1 O VAL B1214 N ILE B1188 SHEET 3 E 9 LEU B1461 ILE B1464 -1 O LEU B1461 N ILE B1215 SHEET 4 E 9 CYS B1397 ASN B1402 -1 N ASN B1400 O VAL B1462 SHEET 5 E 9 CYS B1478 VAL B1485 -1 O ILE B1481 N ILE B1401 SHEET 6 E 9 GLN B1377 LYS B1381 -1 N TYR B1379 O ASN B1480 SHEET 7 E 9 ILE B1325 ASP B1333 -1 N GLY B1329 O MET B1380 SHEET 8 E 9 THR B1242 VAL B1249 -1 N GLU B1244 O THR B1330 SHEET 9 E 9 SER B1271 THR B1276 -1 O SER B1271 N THR B1247 SHEET 1 F 4 ARG B1386 HIS B1390 0 SHEET 2 F 4 VAL B1469 ALA B1474 -1 O VAL B1472 N THR B1387 SHEET 3 F 4 CYS B1408 VAL B1413 -1 N GLU B1409 O GLN B1473 SHEET 4 F 4 TYR B1452 GLN B1456 -1 O GLN B1456 N CYS B1408 SHEET 1 G 4 ILE B1561 TYR B1563 0 SHEET 2 G 4 VAL B1617 GLU B1620 1 O GLU B1620 N ALA B1562 SHEET 3 G 4 LEU B1586 SER B1590 -1 N LEU B1586 O LEU B1619 SHEET 4 G 4 TYR B1598 HIS B1601 -1 O HIS B1601 N PHE B1587 SHEET 1 H 2 TYR B1573 TYR B1574 0 SHEET 2 H 2 GLU B1581 VAL B1582 -1 O VAL B1582 N TYR B1573 LINK NE2 HIS A1390 NI NI A1701 1555 1555 2.16 LINK OE2 GLU A1392 NI NI A1701 1555 1555 1.83 LINK NE2 HIS A1470 NI NI A1701 1555 1555 2.19 LINK SG CYS A1575 ZN ZN A1702 1555 1555 2.24 LINK SG CYS A1578 ZN ZN A1702 1555 1555 2.41 LINK SG CYS A1602 ZN ZN A1702 1555 1555 2.38 LINK SG CYS A1605 ZN ZN A1702 1555 1555 2.46 LINK O2 OGA A1700 NI NI A1701 1555 1555 2.07 LINK O2' OGA A1700 NI NI A1701 1555 1555 2.11 LINK NI NI A1701 O HOH A1827 1555 1555 2.14 LINK NE2 HIS B1390 NI NI B1701 1555 1555 2.18 LINK OE2 GLU B1392 NI NI B1701 1555 1555 1.85 LINK NE2 HIS B1470 NI NI B1701 1555 1555 2.30 LINK SG CYS B1575 ZN ZN B1702 1555 1555 2.28 LINK SG CYS B1578 ZN ZN B1702 1555 1555 2.41 LINK SG CYS B1602 ZN ZN B1702 1555 1555 2.40 LINK SG CYS B1605 ZN ZN B1702 1555 1555 2.38 LINK O2 OGA B1700 NI NI B1701 1555 1555 1.98 LINK O2' OGA B1700 NI NI B1701 1555 1555 2.17 LINK NI NI B1701 O HOH B1832 1555 1555 2.26 CISPEP 1 GLY A 1404 PRO A 1405 0 0.76 CISPEP 2 GLY B 1404 PRO B 1405 0 -2.50 SITE 1 AC1 10 LYS A1381 THR A1387 HIS A1390 GLU A1392 SITE 2 AC1 10 SER A1398 ASN A1400 HIS A1470 NI A1701 SITE 3 AC1 10 HOH A1801 HOH A1827 SITE 1 AC2 5 HIS A1390 GLU A1392 HIS A1470 OGA A1700 SITE 2 AC2 5 HOH A1827 SITE 1 AC3 4 CYS A1575 CYS A1578 CYS A1602 CYS A1605 SITE 1 AC4 10 LYS B1381 THR B1387 HIS B1390 GLU B1392 SITE 2 AC4 10 SER B1398 ASN B1400 HIS B1470 NI B1701 SITE 3 AC4 10 HOH B1807 HOH B1832 SITE 1 AC5 5 HIS B1390 GLU B1392 HIS B1470 OGA B1700 SITE 2 AC5 5 HOH B1832 SITE 1 AC6 4 CYS B1575 CYS B1578 CYS B1602 CYS B1605 CRYST1 82.977 102.284 145.302 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012052 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009777 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006882 0.00000