HEADER OXIDOREDUCTASE 02-MAY-12 4EZH TITLE THE CRYSTAL STRUCTURE OF KDM6B BOUND WITH H3K27ME3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 6B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1155-1641; COMPND 5 SYNONYM: JMJC DOMAIN-CONTAINING PROTEIN 3, JUMONJI DOMAIN-CONTAINING COMPND 6 PROTEIN 3; COMPND 7 EC: 1.14.11.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: SYNTHESIZED METHYLATION PEPTIDE; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KDM6B, JMJD3, KIAA0346; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 SUMO; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 OTHER_DETAILS: THIS SEQUENCE WAS SYNTHESIZED BY TUFTS UNIVERSITY KEYWDS JMJC, HISTONE DEMETHYLASE, HISTONE K27ME3/ME2 'ERASER', KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.J.CHENG,D.J.PATEL REVDAT 4 09-AUG-17 4EZH 1 SOURCE REMARK REVDAT 3 29-AUG-12 4EZH 1 JRNL REVDAT 2 15-AUG-12 4EZH 1 JRNL REVDAT 1 08-AUG-12 4EZH 0 JRNL AUTH L.KRUIDENIER,C.W.CHUNG,Z.CHENG,J.LIDDLE,K.CHE,G.JOBERTY, JRNL AUTH 2 M.BANTSCHEFF,C.BOUNTRA,A.BRIDGES,H.DIALLO,D.EBERHARD, JRNL AUTH 3 S.HUTCHINSON,E.JONES,R.KATSO,M.LEVERIDGE,P.K.MANDER, JRNL AUTH 4 J.MOSLEY,C.RAMIREZ-MOLINA,P.ROWLAND,C.J.SCHOFIELD, JRNL AUTH 5 R.J.SHEPPARD,J.E.SMITH,C.SWALES,R.TANNER,P.THOMAS,A.TUMBER, JRNL AUTH 6 G.DREWES,U.OPPERMANN,D.J.PATEL,K.LEE,D.M.WILSON JRNL TITL A SELECTIVE JUMONJI H3K27 DEMETHYLASE INHIBITOR MODULATES JRNL TITL 2 THE PROINFLAMMATORY MACROPHAGE RESPONSE. JRNL REF NATURE V. 488 404 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22842901 JRNL DOI 10.1038/NATURE11262 REMARK 2 REMARK 2 RESOLUTION. 2.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 41687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2105 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1668 - 6.2099 0.99 2823 165 0.1937 0.2056 REMARK 3 2 6.2099 - 4.9319 1.00 2731 132 0.2000 0.2216 REMARK 3 3 4.9319 - 4.3093 1.00 2716 135 0.1561 0.1912 REMARK 3 4 4.3093 - 3.9156 1.00 2684 149 0.1734 0.2482 REMARK 3 5 3.9156 - 3.6352 1.00 2680 126 0.1948 0.2317 REMARK 3 6 3.6352 - 3.4210 1.00 2638 148 0.2056 0.2849 REMARK 3 7 3.4210 - 3.2497 1.00 2634 153 0.2173 0.2474 REMARK 3 8 3.2497 - 3.1083 1.00 2662 132 0.2268 0.2826 REMARK 3 9 3.1083 - 2.9887 1.00 2635 143 0.2309 0.2797 REMARK 3 10 2.9887 - 2.8856 1.00 2627 148 0.2407 0.3185 REMARK 3 11 2.8856 - 2.7954 1.00 2646 140 0.2671 0.3193 REMARK 3 12 2.7954 - 2.7155 0.99 2623 123 0.2865 0.3493 REMARK 3 13 2.7155 - 2.6440 0.99 2605 155 0.3213 0.3629 REMARK 3 14 2.6440 - 2.5795 0.99 2624 153 0.3669 0.3826 REMARK 3 15 2.5795 - 2.5209 0.85 2254 103 0.4100 0.5239 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 1.13 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 47.64 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.760 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 35.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.58760 REMARK 3 B22 (A**2) : 9.36380 REMARK 3 B33 (A**2) : 0.22380 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 7656 REMARK 3 ANGLE : 1.466 10420 REMARK 3 CHIRALITY : 0.088 1138 REMARK 3 PLANARITY : 0.006 1330 REMARK 3 DIHEDRAL : 17.354 2770 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1157:1239 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6211 -8.1688 -40.6247 REMARK 3 T TENSOR REMARK 3 T11: 0.4628 T22: 0.6426 REMARK 3 T33: 0.1551 T12: -0.1276 REMARK 3 T13: -0.0007 T23: -0.0368 REMARK 3 L TENSOR REMARK 3 L11: 1.2589 L22: 1.5460 REMARK 3 L33: 2.0753 L12: -0.6945 REMARK 3 L13: 0.2773 L23: -0.4418 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: 0.0397 S13: -0.2560 REMARK 3 S21: -0.2200 S22: 0.1683 S23: 0.2541 REMARK 3 S31: 0.2128 S32: -0.2668 S33: -0.1846 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 1240:1268 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9085 3.3399 -48.5301 REMARK 3 T TENSOR REMARK 3 T11: 0.4765 T22: 0.7049 REMARK 3 T33: 0.1607 T12: -0.1486 REMARK 3 T13: -0.0065 T23: 0.0794 REMARK 3 L TENSOR REMARK 3 L11: 1.1820 L22: 1.6919 REMARK 3 L33: 1.7215 L12: -1.1023 REMARK 3 L13: 0.5552 L23: -0.7576 REMARK 3 S TENSOR REMARK 3 S11: 0.0996 S12: 0.0508 S13: 0.1797 REMARK 3 S21: -0.2631 S22: -0.1355 S23: -0.2477 REMARK 3 S31: -0.0837 S32: 0.6603 S33: -0.0188 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 1269:1298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7955 16.2399 -56.4486 REMARK 3 T TENSOR REMARK 3 T11: 0.5269 T22: 0.4411 REMARK 3 T33: 0.2582 T12: -0.3021 REMARK 3 T13: -0.0313 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.5684 L22: 1.9137 REMARK 3 L33: 2.3804 L12: 0.4603 REMARK 3 L13: 0.6949 L23: 0.4259 REMARK 3 S TENSOR REMARK 3 S11: -0.1413 S12: 0.3116 S13: 0.1030 REMARK 3 S21: -0.3098 S22: 0.1782 S23: 0.0172 REMARK 3 S31: -0.3750 S32: 0.2454 S33: -0.0448 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 1299:1352 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5635 9.7241 -41.2659 REMARK 3 T TENSOR REMARK 3 T11: 0.3631 T22: 0.4290 REMARK 3 T33: 0.1387 T12: 0.0215 REMARK 3 T13: 0.0158 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 1.1673 L22: 1.0318 REMARK 3 L33: 3.9498 L12: 0.1207 REMARK 3 L13: -0.2758 L23: -0.7358 REMARK 3 S TENSOR REMARK 3 S11: 0.0929 S12: -0.3549 S13: 0.2166 REMARK 3 S21: 0.1335 S22: -0.0623 S23: 0.0378 REMARK 3 S31: -0.5767 S32: 0.0892 S33: -0.0305 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 1353:1503 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8683 -3.7505 -37.7833 REMARK 3 T TENSOR REMARK 3 T11: 0.2635 T22: 0.5408 REMARK 3 T33: -0.2888 T12: -0.1242 REMARK 3 T13: 0.0059 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.6891 L22: 0.5981 REMARK 3 L33: 1.5144 L12: -0.3556 REMARK 3 L13: -0.1438 L23: -0.2793 REMARK 3 S TENSOR REMARK 3 S11: -0.0014 S12: -0.2056 S13: 0.0076 REMARK 3 S21: 0.0649 S22: 0.0505 S23: 0.0366 REMARK 3 S31: 0.0662 S32: 0.0643 S33: 0.0736 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 1504:1636 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6037 -0.9380 -9.1642 REMARK 3 T TENSOR REMARK 3 T11: 0.3715 T22: 0.8370 REMARK 3 T33: 0.2250 T12: -0.1407 REMARK 3 T13: 0.0001 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.5793 L22: 1.5901 REMARK 3 L33: 4.4013 L12: 0.0473 REMARK 3 L13: 0.4430 L23: 1.0363 REMARK 3 S TENSOR REMARK 3 S11: 0.0786 S12: -0.3377 S13: 0.3174 REMARK 3 S21: 0.1095 S22: -0.0401 S23: -0.1567 REMARK 3 S31: -0.2048 S32: 0.3738 S33: 0.0539 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN B AND RESID 1157:1297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.6977 0.3892 -17.6167 REMARK 3 T TENSOR REMARK 3 T11: 0.4183 T22: 0.8535 REMARK 3 T33: 0.1874 T12: -0.0775 REMARK 3 T13: 0.0749 T23: -0.0484 REMARK 3 L TENSOR REMARK 3 L11: 0.9353 L22: 1.1482 REMARK 3 L33: 1.8570 L12: -0.0900 REMARK 3 L13: 0.0531 L23: -0.6394 REMARK 3 S TENSOR REMARK 3 S11: -0.0506 S12: -0.0952 S13: 0.1252 REMARK 3 S21: 0.1327 S22: 0.1406 S23: 0.1116 REMARK 3 S31: -0.1371 S32: -0.1648 S33: -0.1872 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN B AND RESID 1298:1503 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.7401 1.2749 -24.5593 REMARK 3 T TENSOR REMARK 3 T11: 0.3728 T22: 0.8049 REMARK 3 T33: 0.1997 T12: -0.0949 REMARK 3 T13: 0.0345 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.7389 L22: 0.7903 REMARK 3 L33: 1.7733 L12: 0.1468 REMARK 3 L13: -0.2030 L23: -0.0293 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: -0.0320 S13: 0.0926 REMARK 3 S21: 0.0148 S22: 0.0546 S23: 0.0730 REMARK 3 S31: 0.0136 S32: -0.1081 S33: -0.0300 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN B AND RESID 1504:1638 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.3323 0.9335 -53.7504 REMARK 3 T TENSOR REMARK 3 T11: 0.3127 T22: 0.8142 REMARK 3 T33: 0.2455 T12: -0.0725 REMARK 3 T13: -0.0009 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 0.8724 L22: 1.7164 REMARK 3 L33: 4.4949 L12: -0.7739 REMARK 3 L13: -0.3999 L23: 0.8284 REMARK 3 S TENSOR REMARK 3 S11: 0.0597 S12: 0.2304 S13: -0.0359 REMARK 3 S21: -0.0169 S22: -0.0794 S23: 0.0340 REMARK 3 S31: 0.0479 S32: 0.1375 S33: 0.0714 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): 10.8569 8.5996 -33.9119 REMARK 3 T TENSOR REMARK 3 T11: 0.5693 T22: 0.6554 REMARK 3 T33: 0.4743 T12: -0.1214 REMARK 3 T13: 0.0028 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 0.0009 L22: 0.0005 REMARK 3 L33: 0.0012 L12: 0.0004 REMARK 3 L13: -0.0001 L23: -0.0010 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.0034 S13: -0.0111 REMARK 3 S21: -0.0011 S22: -0.0122 S23: -0.0103 REMARK 3 S31: 0.0113 S32: 0.0008 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: NULL REMARK 3 ORIGIN FOR THE GROUP (A): -30.9629 -8.5143 -28.9125 REMARK 3 T TENSOR REMARK 3 T11: 0.5849 T22: 0.7304 REMARK 3 T33: 0.5080 T12: 0.0890 REMARK 3 T13: 0.0791 T23: -0.1123 REMARK 3 L TENSOR REMARK 3 L11: 0.0007 L22: -0.0007 REMARK 3 L33: 0.0017 L12: -0.0001 REMARK 3 L13: -0.0004 L23: 0.0000 REMARK 3 S TENSOR REMARK 3 S11: -0.0126 S12: 0.0008 S13: -0.0014 REMARK 3 S21: 0.0076 S22: -0.0318 S23: -0.0187 REMARK 3 S31: -0.0155 S32: 0.0032 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 1155:1168 OR RESSEQ REMARK 3 1321:1565 OR RESSEQ 1567:1589 OR RESSEQ REMARK 3 1596:1636 ) AND (NOT ELEMENT H) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 1155:1168 OR RESSEQ REMARK 3 1321:1565 OR RESSEQ 1567:1589 OR RESSEQ REMARK 3 1596:1636 ) AND (NOT ELEMENT H) REMARK 3 ATOM PAIRS NUMBER : 2609 REMARK 3 RMSD : 0.166 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4EZH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072263. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41888 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.63000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% METHANOL, 6% MPD, 5% PEG 4K, 5% REMARK 280 GLYCEROL, HEPES 8.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K, PH 8.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.84100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.20650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.84100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.20650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1303 REMARK 465 PRO A 1304 REMARK 465 THR A 1305 REMARK 465 LYS A 1306 REMARK 465 ALA A 1307 REMARK 465 ALA A 1308 REMARK 465 ARG A 1309 REMARK 465 LYS A 1310 REMARK 465 SER A 1311 REMARK 465 ALA A 1312 REMARK 465 PRO A 1313 REMARK 465 ALA A 1314 REMARK 465 THR A 1315 REMARK 465 GLY A 1316 REMARK 465 GLY A 1317 REMARK 465 GLY A 1318 REMARK 465 SER A 1319 REMARK 465 SER A 1320 REMARK 465 GLY A 1321 REMARK 465 SER A 1322 REMARK 465 GLU A 1591 REMARK 465 ASN A 1592 REMARK 465 GLY A 1593 REMARK 465 SER A 1594 REMARK 465 ARG A 1595 REMARK 465 ASN A 1596 REMARK 465 ALA A 1639 REMARK 465 SER A 1640 REMARK 465 THR A 1641 REMARK 465 SER A 1642 REMARK 465 ARG A 1643 REMARK 465 ASN B 1171 REMARK 465 THR B 1172 REMARK 465 GLU B 1173 REMARK 465 GLN B 1302 REMARK 465 GLY B 1303 REMARK 465 PRO B 1304 REMARK 465 THR B 1305 REMARK 465 LYS B 1306 REMARK 465 ALA B 1307 REMARK 465 ALA B 1308 REMARK 465 ARG B 1309 REMARK 465 LYS B 1310 REMARK 465 SER B 1311 REMARK 465 ALA B 1312 REMARK 465 PRO B 1313 REMARK 465 ALA B 1314 REMARK 465 THR B 1315 REMARK 465 GLY B 1316 REMARK 465 GLY B 1317 REMARK 465 GLY B 1318 REMARK 465 SER B 1319 REMARK 465 SER B 1320 REMARK 465 GLY B 1321 REMARK 465 SER B 1322 REMARK 465 GLU B 1591 REMARK 465 ASN B 1592 REMARK 465 GLY B 1593 REMARK 465 SER B 1594 REMARK 465 ARG B 1595 REMARK 465 ASN B 1596 REMARK 465 ALA B 1639 REMARK 465 SER B 1640 REMARK 465 THR B 1641 REMARK 465 SER B 1642 REMARK 465 ARG B 1643 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LYS A 1169 NH2 ARG A 1339 3544 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1186 105.66 -56.78 REMARK 500 SER A1238 111.74 -165.46 REMARK 500 ASP A1258 -177.93 -67.40 REMARK 500 SER A1270 86.21 -150.41 REMARK 500 GLU A1294 9.18 -69.40 REMARK 500 GLU A1297 -65.10 -106.80 REMARK 500 LEU A1334 59.22 -90.67 REMARK 500 MET A1362 -37.14 -39.03 REMARK 500 CYS A1397 151.04 -49.02 REMARK 500 PRO A1513 81.71 -69.74 REMARK 500 ASN A1584 -58.25 72.80 REMARK 500 SER B1158 158.50 -49.91 REMARK 500 LYS B1175 160.57 -32.63 REMARK 500 PRO B1186 107.04 -51.54 REMARK 500 SER B1238 84.52 -159.59 REMARK 500 SER B1253 -136.07 54.58 REMARK 500 THR B1275 -157.50 -154.68 REMARK 500 LEU B1334 59.97 -90.98 REMARK 500 MET B1362 -37.34 -39.26 REMARK 500 ASN B1584 -57.93 72.39 REMARK 500 SER B1610 108.83 -166.96 REMARK 500 THR C 32 -27.20 -146.16 REMARK 500 ALA D 25 81.75 -68.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 1174 LYS B 1175 -135.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1575 SG REMARK 620 2 CYS A1605 SG 105.3 REMARK 620 3 CYS A1602 SG 114.0 103.3 REMARK 620 4 CYS A1578 SG 117.4 113.7 102.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B1701 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1470 NE2 REMARK 620 2 GLU B1392 OE2 84.0 REMARK 620 3 OGA B1703 O2 80.1 74.5 REMARK 620 4 OGA B1703 O2' 96.3 167.1 92.8 REMARK 620 5 HIS B1390 NE2 104.5 111.2 172.8 81.3 REMARK 620 6 HOH B1811 O 177.9 94.1 100.4 85.7 75.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1701 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1470 NE2 REMARK 620 2 OGA A1703 O2' 93.5 REMARK 620 3 GLU A1392 OE2 84.6 158.6 REMARK 620 4 HIS A1390 NE2 99.3 90.7 110.7 REMARK 620 5 OGA A1703 O2 91.6 78.6 80.2 165.2 REMARK 620 6 HOH A1813 O 177.3 88.8 92.7 82.0 87.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1605 SG REMARK 620 2 CYS B1575 SG 115.3 REMARK 620 3 CYS B1578 SG 113.2 105.8 REMARK 620 4 CYS B1602 SG 101.7 118.9 101.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OGA A 1703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI B 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OGA B 1703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ASK RELATED DB: PDB REMARK 900 RELATED ID: 4EYU RELATED DB: PDB REMARK 900 RELATED ID: 4EZ4 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 REPLACEMENT OF THE ORIGINAL LOOP SEQUENCE OF REMARK 999 ESEDEESEEPDSTTGTSPSSAPDPKN(RESIDUES 1296-1322) WITH RESIDUES OF REMARK 999 LEVLFQGPTKAARKSAPATGGGSSGS. DBREF 4EZH A 1157 1295 UNP Q5NCY0 KDM6B_MOUSE 1155 1293 DBREF 4EZH A 1323 1643 UNP Q5NCY0 KDM6B_MOUSE 1321 1641 DBREF 4EZH B 1157 1295 UNP Q5NCY0 KDM6B_MOUSE 1155 1293 DBREF 4EZH B 1323 1643 UNP Q5NCY0 KDM6B_MOUSE 1321 1641 DBREF 4EZH C 24 34 PDB 4EZH 4EZH 24 34 DBREF 4EZH D 24 34 PDB 4EZH 4EZH 24 34 SEQADV 4EZH LEU A 1296 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLU A 1297 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH VAL A 1298 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LEU A 1299 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH PHE A 1300 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLN A 1301 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY A 1303 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH PRO A 1304 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH THR A 1305 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LYS A 1306 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA A 1307 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA A 1308 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ARG A 1309 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LYS A 1310 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER A 1311 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA A 1312 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH PRO A 1313 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA A 1314 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH THR A 1315 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY A 1316 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY A 1317 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY A 1318 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER A 1319 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER A 1320 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY A 1321 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER A 1322 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LEU B 1296 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLU B 1297 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH VAL B 1298 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LEU B 1299 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH PHE B 1300 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLN B 1302 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY B 1303 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH PRO B 1304 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH THR B 1305 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LYS B 1306 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA B 1307 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA B 1308 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ARG B 1309 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH LYS B 1310 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER B 1311 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA B 1312 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH PRO B 1313 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH ALA B 1314 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH THR B 1315 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY B 1316 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY B 1317 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY B 1318 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER B 1319 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER B 1320 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH GLY B 1321 UNP Q5NCY0 SEE REMARK 999 SEQADV 4EZH SER B 1322 UNP Q5NCY0 SEE REMARK 999 SEQRES 1 A 486 GLU SER TYR LEU SER PRO ALA GLN SER VAL LYS PRO LYS SEQRES 2 A 486 ILE ASN THR GLU GLU LYS LEU PRO ARG GLU LYS LEU ASN SEQRES 3 A 486 PRO PRO THR PRO SER ILE TYR LEU GLU SER LYS ARG ASP SEQRES 4 A 486 ALA PHE SER PRO VAL LEU LEU GLN PHE CYS THR ASP PRO SEQRES 5 A 486 ARG ASN PRO ILE THR VAL ILE ARG GLY LEU ALA GLY SER SEQRES 6 A 486 LEU ARG LEU ASN LEU GLY LEU PHE SER THR LYS THR LEU SEQRES 7 A 486 VAL GLU ALA SER GLY GLU HIS THR VAL GLU VAL ARG THR SEQRES 8 A 486 GLN VAL GLN GLN PRO SER ASP GLU ASN TRP ASP LEU THR SEQRES 9 A 486 GLY THR ARG GLN ILE TRP PRO CYS GLU SER SER ARG SER SEQRES 10 A 486 HIS THR THR ILE ALA LYS TYR ALA GLN TYR GLN ALA SER SEQRES 11 A 486 SER PHE GLN GLU SER LEU GLN GLU GLU LEU GLU VAL LEU SEQRES 12 A 486 PHE GLN GLY PRO THR LYS ALA ALA ARG LYS SER ALA PRO SEQRES 13 A 486 ALA THR GLY GLY GLY SER SER GLY SER HIS HIS ILE ILE SEQRES 14 A 486 LYS PHE GLY THR ASN ILE ASP LEU SER ASP ALA LYS ARG SEQRES 15 A 486 TRP LYS PRO GLN LEU GLN GLU LEU LEU LYS LEU PRO ALA SEQRES 16 A 486 PHE MET ARG VAL THR SER THR GLY ASN MET LEU SER HIS SEQRES 17 A 486 VAL GLY HIS THR ILE LEU GLY MET ASN THR VAL GLN LEU SEQRES 18 A 486 TYR MET LYS VAL PRO GLY SER ARG THR PRO GLY HIS GLN SEQRES 19 A 486 GLU ASN ASN ASN PHE CYS SER VAL ASN ILE ASN ILE GLY SEQRES 20 A 486 PRO GLY ASP CYS GLU TRP PHE ALA VAL HIS GLU HIS TYR SEQRES 21 A 486 TRP GLU THR ILE SER ALA PHE CYS ASP ARG HIS GLY VAL SEQRES 22 A 486 ASP TYR LEU THR GLY SER TRP TRP PRO ILE LEU ASP ASP SEQRES 23 A 486 LEU TYR ALA SER ASN ILE PRO VAL TYR ARG PHE VAL GLN SEQRES 24 A 486 ARG PRO GLY ASP LEU VAL TRP ILE ASN ALA GLY THR VAL SEQRES 25 A 486 HIS TRP VAL GLN ALA THR GLY TRP CYS ASN ASN ILE ALA SEQRES 26 A 486 TRP ASN VAL GLY PRO LEU THR ALA TYR GLN TYR GLN LEU SEQRES 27 A 486 ALA LEU GLU ARG TYR GLU TRP ASN GLU VAL LYS ASN VAL SEQRES 28 A 486 LYS SER ILE VAL PRO MET ILE HIS VAL SER TRP ASN VAL SEQRES 29 A 486 ALA ARG THR VAL LYS ILE SER ASP PRO ASP LEU PHE LYS SEQRES 30 A 486 MET ILE LYS PHE CYS LEU LEU GLN SER MET LYS HIS CYS SEQRES 31 A 486 GLN VAL GLN ARG GLU SER LEU VAL ARG ALA GLY LYS LYS SEQRES 32 A 486 ILE ALA TYR GLN GLY ARG VAL LYS ASP GLU PRO ALA TYR SEQRES 33 A 486 TYR CYS ASN GLU CYS ASP VAL GLU VAL PHE ASN ILE LEU SEQRES 34 A 486 PHE VAL THR SER GLU ASN GLY SER ARG ASN THR TYR LEU SEQRES 35 A 486 VAL HIS CYS GLU GLY CYS ALA ARG ARG ARG SER ALA GLY SEQRES 36 A 486 LEU GLN GLY VAL VAL VAL LEU GLU GLN TYR ARG THR GLU SEQRES 37 A 486 GLU LEU ALA GLN ALA TYR ASP ALA PHE THR LEU ALA PRO SEQRES 38 A 486 ALA SER THR SER ARG SEQRES 1 B 486 GLU SER TYR LEU SER PRO ALA GLN SER VAL LYS PRO LYS SEQRES 2 B 486 ILE ASN THR GLU GLU LYS LEU PRO ARG GLU LYS LEU ASN SEQRES 3 B 486 PRO PRO THR PRO SER ILE TYR LEU GLU SER LYS ARG ASP SEQRES 4 B 486 ALA PHE SER PRO VAL LEU LEU GLN PHE CYS THR ASP PRO SEQRES 5 B 486 ARG ASN PRO ILE THR VAL ILE ARG GLY LEU ALA GLY SER SEQRES 6 B 486 LEU ARG LEU ASN LEU GLY LEU PHE SER THR LYS THR LEU SEQRES 7 B 486 VAL GLU ALA SER GLY GLU HIS THR VAL GLU VAL ARG THR SEQRES 8 B 486 GLN VAL GLN GLN PRO SER ASP GLU ASN TRP ASP LEU THR SEQRES 9 B 486 GLY THR ARG GLN ILE TRP PRO CYS GLU SER SER ARG SER SEQRES 10 B 486 HIS THR THR ILE ALA LYS TYR ALA GLN TYR GLN ALA SER SEQRES 11 B 486 SER PHE GLN GLU SER LEU GLN GLU GLU LEU GLU VAL LEU SEQRES 12 B 486 PHE GLN GLY PRO THR LYS ALA ALA ARG LYS SER ALA PRO SEQRES 13 B 486 ALA THR GLY GLY GLY SER SER GLY SER HIS HIS ILE ILE SEQRES 14 B 486 LYS PHE GLY THR ASN ILE ASP LEU SER ASP ALA LYS ARG SEQRES 15 B 486 TRP LYS PRO GLN LEU GLN GLU LEU LEU LYS LEU PRO ALA SEQRES 16 B 486 PHE MET ARG VAL THR SER THR GLY ASN MET LEU SER HIS SEQRES 17 B 486 VAL GLY HIS THR ILE LEU GLY MET ASN THR VAL GLN LEU SEQRES 18 B 486 TYR MET LYS VAL PRO GLY SER ARG THR PRO GLY HIS GLN SEQRES 19 B 486 GLU ASN ASN ASN PHE CYS SER VAL ASN ILE ASN ILE GLY SEQRES 20 B 486 PRO GLY ASP CYS GLU TRP PHE ALA VAL HIS GLU HIS TYR SEQRES 21 B 486 TRP GLU THR ILE SER ALA PHE CYS ASP ARG HIS GLY VAL SEQRES 22 B 486 ASP TYR LEU THR GLY SER TRP TRP PRO ILE LEU ASP ASP SEQRES 23 B 486 LEU TYR ALA SER ASN ILE PRO VAL TYR ARG PHE VAL GLN SEQRES 24 B 486 ARG PRO GLY ASP LEU VAL TRP ILE ASN ALA GLY THR VAL SEQRES 25 B 486 HIS TRP VAL GLN ALA THR GLY TRP CYS ASN ASN ILE ALA SEQRES 26 B 486 TRP ASN VAL GLY PRO LEU THR ALA TYR GLN TYR GLN LEU SEQRES 27 B 486 ALA LEU GLU ARG TYR GLU TRP ASN GLU VAL LYS ASN VAL SEQRES 28 B 486 LYS SER ILE VAL PRO MET ILE HIS VAL SER TRP ASN VAL SEQRES 29 B 486 ALA ARG THR VAL LYS ILE SER ASP PRO ASP LEU PHE LYS SEQRES 30 B 486 MET ILE LYS PHE CYS LEU LEU GLN SER MET LYS HIS CYS SEQRES 31 B 486 GLN VAL GLN ARG GLU SER LEU VAL ARG ALA GLY LYS LYS SEQRES 32 B 486 ILE ALA TYR GLN GLY ARG VAL LYS ASP GLU PRO ALA TYR SEQRES 33 B 486 TYR CYS ASN GLU CYS ASP VAL GLU VAL PHE ASN ILE LEU SEQRES 34 B 486 PHE VAL THR SER GLU ASN GLY SER ARG ASN THR TYR LEU SEQRES 35 B 486 VAL HIS CYS GLU GLY CYS ALA ARG ARG ARG SER ALA GLY SEQRES 36 B 486 LEU GLN GLY VAL VAL VAL LEU GLU GLN TYR ARG THR GLU SEQRES 37 B 486 GLU LEU ALA GLN ALA TYR ASP ALA PHE THR LEU ALA PRO SEQRES 38 B 486 ALA SER THR SER ARG SEQRES 1 C 11 ALA ALA ARG M3L SER ALA PRO ALA THR GLY GLY SEQRES 1 D 11 ALA ALA ARG M3L SER ALA PRO ALA THR GLY GLY MODRES 4EZH M3L C 27 LYS N-TRIMETHYLLYSINE MODRES 4EZH M3L D 27 LYS N-TRIMETHYLLYSINE HET M3L C 27 12 HET M3L D 27 12 HET NI A1701 1 HET ZN A1702 1 HET OGA A1703 10 HET NI B1701 1 HET ZN B1702 1 HET OGA B1703 10 HETNAM M3L N-TRIMETHYLLYSINE HETNAM NI NICKEL (II) ION HETNAM ZN ZINC ION HETNAM OGA N-OXALYLGLYCINE FORMUL 3 M3L 2(C9 H21 N2 O2 1+) FORMUL 5 NI 2(NI 2+) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 OGA 2(C4 H5 N O5) FORMUL 11 HOH *82(H2 O) HELIX 1 1 SER A 1161 SER A 1165 5 5 HELIX 2 2 PRO A 1177 ASN A 1182 1 6 HELIX 3 3 ARG A 1194 PHE A 1197 5 4 HELIX 4 4 SER A 1198 ASP A 1207 1 10 HELIX 5 5 GLY A 1217 LEU A 1222 1 6 HELIX 6 6 ASN A 1225 PHE A 1229 5 5 HELIX 7 7 SER A 1230 SER A 1238 1 9 HELIX 8 8 ILE A 1277 GLU A 1294 1 18 HELIX 9 9 TRP A 1340 LEU A 1347 1 8 HELIX 10 10 LEU A 1348 LEU A 1350 5 3 HELIX 11 11 PRO A 1351 ARG A 1355 5 5 HELIX 12 12 ASN A 1361 VAL A 1366 5 6 HELIX 13 13 GLU A 1392 PHE A 1396 5 5 HELIX 14 14 HIS A 1414 HIS A 1416 5 3 HELIX 15 15 TYR A 1417 HIS A 1428 1 12 HELIX 16 16 ILE A 1440 SER A 1447 1 8 HELIX 17 17 THR A 1489 LYS A 1506 1 18 HELIX 18 18 PRO A 1513 VAL A 1525 1 13 HELIX 19 19 ASP A 1529 ALA A 1557 1 29 HELIX 20 20 CYS A 1602 ARG A 1608 1 7 HELIX 21 21 ARG A 1623 PHE A 1634 1 12 HELIX 22 22 SER B 1161 SER B 1165 5 5 HELIX 23 23 PRO B 1177 LEU B 1181 5 5 HELIX 24 24 ARG B 1194 PHE B 1197 5 4 HELIX 25 25 SER B 1198 THR B 1206 1 9 HELIX 26 26 GLY B 1217 LEU B 1222 1 6 HELIX 27 27 ASN B 1225 PHE B 1229 5 5 HELIX 28 28 SER B 1230 SER B 1238 1 9 HELIX 29 29 ILE B 1277 LEU B 1296 1 20 HELIX 30 30 TRP B 1340 LEU B 1347 1 8 HELIX 31 31 LEU B 1348 LEU B 1350 5 3 HELIX 32 32 PRO B 1351 ARG B 1355 5 5 HELIX 33 33 ASN B 1361 VAL B 1366 5 6 HELIX 34 34 GLU B 1392 PHE B 1396 5 5 HELIX 35 35 HIS B 1414 HIS B 1416 5 3 HELIX 36 36 TYR B 1417 HIS B 1428 1 12 HELIX 37 37 ILE B 1440 SER B 1447 1 8 HELIX 38 38 THR B 1489 LYS B 1506 1 18 HELIX 39 39 PRO B 1513 VAL B 1525 1 13 HELIX 40 40 ASP B 1529 ALA B 1557 1 29 HELIX 41 41 CYS B 1602 ARG B 1608 1 7 HELIX 42 42 ARG B 1623 PHE B 1634 1 12 SHEET 1 A 9 SER A1187 TYR A1189 0 SHEET 2 A 9 ILE A1212 ARG A1216 1 O ARG A1216 N ILE A1188 SHEET 3 A 9 LEU A1461 ILE A1464 -1 O LEU A1461 N ILE A1215 SHEET 4 A 9 CYS A1397 PRO A1405 -1 N ASN A1400 O VAL A1462 SHEET 5 A 9 CYS A1478 VAL A1485 -1 O ILE A1481 N ILE A1401 SHEET 6 A 9 VAL A1376 LYS A1381 -1 N LYS A1381 O CYS A1478 SHEET 7 A 9 ILE A1325 LEU A1334 -1 N ILE A1332 O LEU A1378 SHEET 8 A 9 THR A1242 VAL A1249 -1 N ARG A1246 O PHE A1328 SHEET 9 A 9 SER A1271 THR A1276 -1 O SER A1273 N VAL A1245 SHEET 1 B 4 ARG A1386 HIS A1390 0 SHEET 2 B 4 VAL A1469 ALA A1474 -1 O VAL A1472 N THR A1387 SHEET 3 B 4 CYS A1408 VAL A1413 -1 N GLU A1409 O GLN A1473 SHEET 4 B 4 TYR A1452 GLN A1456 -1 O PHE A1454 N TRP A1410 SHEET 1 C 4 ALA A1562 TYR A1563 0 SHEET 2 C 4 VAL A1617 GLU A1620 1 O VAL A1618 N ALA A1562 SHEET 3 C 4 ILE A1585 THR A1589 -1 N LEU A1586 O LEU A1619 SHEET 4 C 4 LEU A1599 HIS A1601 -1 O LEU A1599 N THR A1589 SHEET 1 D 2 TYR A1573 TYR A1574 0 SHEET 2 D 2 GLU A1581 VAL A1582 -1 O VAL A1582 N TYR A1573 SHEET 1 E 9 SER B1187 TYR B1189 0 SHEET 2 E 9 ILE B1212 ARG B1216 1 O ARG B1216 N ILE B1188 SHEET 3 E 9 LEU B1461 ILE B1464 -1 O TRP B1463 N THR B1213 SHEET 4 E 9 CYS B1397 PRO B1405 -1 N ASN B1400 O VAL B1462 SHEET 5 E 9 CYS B1478 VAL B1485 -1 O ILE B1481 N ILE B1401 SHEET 6 E 9 VAL B1376 LYS B1381 -1 N LYS B1381 O CYS B1478 SHEET 7 E 9 ILE B1325 LEU B1334 -1 N ILE B1332 O LEU B1378 SHEET 8 E 9 THR B1242 VAL B1249 -1 N ARG B1246 O PHE B1328 SHEET 9 E 9 SER B1271 THR B1276 -1 O SER B1273 N VAL B1245 SHEET 1 F 4 ARG B1386 HIS B1390 0 SHEET 2 F 4 VAL B1469 ALA B1474 -1 O VAL B1472 N THR B1387 SHEET 3 F 4 CYS B1408 VAL B1413 -1 N GLU B1409 O GLN B1473 SHEET 4 F 4 TYR B1452 GLN B1456 -1 O GLN B1456 N CYS B1408 SHEET 1 G 4 ALA B1562 TYR B1563 0 SHEET 2 G 4 VAL B1617 GLU B1620 1 O VAL B1618 N ALA B1562 SHEET 3 G 4 ILE B1585 THR B1589 -1 N VAL B1588 O VAL B1617 SHEET 4 G 4 LEU B1599 HIS B1601 -1 O LEU B1599 N THR B1589 SHEET 1 H 2 TYR B1573 TYR B1574 0 SHEET 2 H 2 GLU B1581 VAL B1582 -1 O VAL B1582 N TYR B1573 LINK C ARG C 26 N M3L C 27 1555 1555 1.31 LINK C M3L C 27 N SER C 28 1555 1555 1.29 LINK C ARG D 26 N M3L D 27 1555 1555 1.37 LINK C M3L D 27 N SER D 28 1555 1555 1.34 LINK SG CYS A1575 ZN ZN A1702 1555 1555 1.92 LINK NE2 HIS B1470 NI NI B1701 1555 1555 1.93 LINK NE2 HIS A1470 NI NI A1701 1555 1555 1.94 LINK OE2 GLU B1392 NI NI B1701 1555 1555 2.09 LINK NI NI A1701 O2' OGA A1703 1555 1555 2.11 LINK OE2 GLU A1392 NI NI A1701 1555 1555 2.12 LINK NI NI B1701 O2 OGA B1703 1555 1555 2.13 LINK NI NI B1701 O2' OGA B1703 1555 1555 2.16 LINK NE2 HIS A1390 NI NI A1701 1555 1555 2.16 LINK NE2 HIS B1390 NI NI B1701 1555 1555 2.17 LINK NI NI A1701 O2 OGA A1703 1555 1555 2.18 LINK NI NI B1701 O HOH B1811 1555 1555 2.20 LINK SG CYS B1605 ZN ZN B1702 1555 1555 2.24 LINK NI NI A1701 O HOH A1813 1555 1555 2.26 LINK SG CYS A1605 ZN ZN A1702 1555 1555 2.30 LINK SG CYS B1575 ZN ZN B1702 1555 1555 2.39 LINK SG CYS B1578 ZN ZN B1702 1555 1555 2.50 LINK SG CYS A1602 ZN ZN A1702 1555 1555 2.52 LINK SG CYS B1602 ZN ZN B1702 1555 1555 2.55 LINK SG CYS A1578 ZN ZN A1702 1555 1555 2.57 CISPEP 1 GLY A 1404 PRO A 1405 0 0.51 CISPEP 2 GLY B 1404 PRO B 1405 0 0.47 SITE 1 AC1 5 HIS A1390 GLU A1392 HIS A1470 OGA A1703 SITE 2 AC1 5 HOH A1813 SITE 1 AC2 4 CYS A1575 CYS A1578 CYS A1602 CYS A1605 SITE 1 AC3 12 LYS A1381 THR A1387 HIS A1390 GLU A1392 SITE 2 AC3 12 SER A1398 ASN A1400 HIS A1470 ALA A1482 SITE 3 AC3 12 NI A1701 HOH A1801 HOH A1813 M3L C 27 SITE 1 AC4 5 HIS B1390 GLU B1392 HIS B1470 OGA B1703 SITE 2 AC4 5 HOH B1811 SITE 1 AC5 4 CYS B1575 CYS B1578 CYS B1602 CYS B1605 SITE 1 AC6 11 LYS B1381 THR B1387 HIS B1390 GLU B1392 SITE 2 AC6 11 SER B1398 ASN B1400 HIS B1470 NI B1701 SITE 3 AC6 11 HOH B1802 HOH B1811 M3L D 27 CRYST1 83.682 102.413 143.200 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011950 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006983 0.00000