HEADER TRANSFERASE 03-MAY-12 4F04 TITLE A SECOND ALLOSTERIC SITE IN E. COLI ASPARTATE TRANSCARBAMOYLASE: R- TITLE 2 STATE ATCASE WITH UTP BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE CATALYTIC CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ASPARTATE TRANSCARBAMYLASE, ATCASE; COMPND 5 EC: 2.1.3.2; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN; COMPND 9 CHAIN: B, D; COMPND 10 EC: 2.1.3.2; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B4245, JW4204, PYRB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: EK1104; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PEK152; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 83333; SOURCE 13 STRAIN: K12; SOURCE 14 GENE: B4244, JW4203, PYRI; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: EK1104; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PEK152 KEYWDS ALLOSTERIC REGULATION, ATCASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.W.PETERSON,G.M.COCKRELL,E.R.KANTROWITZ REVDAT 4 28-FEB-24 4F04 1 REMARK LINK REVDAT 3 15-NOV-17 4F04 1 REMARK REVDAT 2 26-JUN-13 4F04 1 JRNL REVDAT 1 11-JUL-12 4F04 0 JRNL AUTH A.W.PETERSON,G.M.COCKRELL,E.R.KANTROWITZ JRNL TITL A SECOND ALLOSTERIC SITE IN ESCHERICHIA COLI ASPARTATE JRNL TITL 2 TRANSCARBAMOYLASE. JRNL REF BIOCHEMISTRY V. 51 4776 2012 JRNL REFN ISSN 0006-2960 JRNL PMID 22667327 JRNL DOI 10.1021/BI3006219 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 59188 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.7526 - 6.3375 1.00 2877 152 0.1537 0.1880 REMARK 3 2 6.3375 - 5.0318 1.00 2746 138 0.1699 0.1968 REMARK 3 3 5.0318 - 4.3962 1.00 2718 153 0.1316 0.1415 REMARK 3 4 4.3962 - 3.9944 1.00 2721 132 0.1389 0.1863 REMARK 3 5 3.9944 - 3.7082 1.00 2697 127 0.1633 0.1937 REMARK 3 6 3.7082 - 3.4896 1.00 2688 144 0.1720 0.1867 REMARK 3 7 3.4896 - 3.3149 1.00 2660 151 0.1923 0.2218 REMARK 3 8 3.3149 - 3.1706 1.00 2672 139 0.2021 0.2407 REMARK 3 9 3.1706 - 3.0486 1.00 2656 154 0.2072 0.2440 REMARK 3 10 3.0486 - 2.9434 1.00 2637 159 0.2012 0.2442 REMARK 3 11 2.9434 - 2.8514 1.00 2670 133 0.1973 0.2445 REMARK 3 12 2.8514 - 2.7699 1.00 2640 150 0.1927 0.2451 REMARK 3 13 2.7699 - 2.6970 1.00 2635 145 0.1905 0.2296 REMARK 3 14 2.6970 - 2.6312 1.00 2679 143 0.2031 0.2267 REMARK 3 15 2.6312 - 2.5714 1.00 2634 166 0.2015 0.2621 REMARK 3 16 2.5714 - 2.5166 1.00 2650 143 0.2025 0.2318 REMARK 3 17 2.5166 - 2.4663 1.00 2625 146 0.1997 0.2439 REMARK 3 18 2.4663 - 2.4198 1.00 2659 124 0.2131 0.2903 REMARK 3 19 2.4198 - 2.3766 1.00 2626 124 0.2349 0.2775 REMARK 3 20 2.3766 - 2.3363 1.00 2658 136 0.2399 0.3073 REMARK 3 21 2.3363 - 2.3000 1.00 2650 131 0.2549 0.2943 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.40 REMARK 3 SHRINKAGE RADIUS : 1.24 REMARK 3 K_SOL : 0.28 REMARK 3 B_SOL : 39.47 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.49690 REMARK 3 B22 (A**2) : 3.49690 REMARK 3 B33 (A**2) : -6.99390 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 7281 REMARK 3 ANGLE : 1.082 9888 REMARK 3 CHIRALITY : 0.073 1146 REMARK 3 PLANARITY : 0.005 1277 REMARK 3 DIHEDRAL : 14.445 2717 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 25 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 1:73) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1568 36.6032 2.1611 REMARK 3 T TENSOR REMARK 3 T11: 0.4169 T22: 0.4092 REMARK 3 T33: 0.3352 T12: 0.0156 REMARK 3 T13: -0.1121 T23: 0.0947 REMARK 3 L TENSOR REMARK 3 L11: 0.7704 L22: 0.9079 REMARK 3 L33: 0.5935 L12: 0.2459 REMARK 3 L13: -0.5027 L23: 0.4019 REMARK 3 S TENSOR REMARK 3 S11: 0.0019 S12: 0.3778 S13: 0.1151 REMARK 3 S21: -0.4587 S22: 0.1202 S23: 0.1269 REMARK 3 S31: -0.1484 S32: -0.0511 S33: 0.0036 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 74:166) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6799 39.1164 13.0046 REMARK 3 T TENSOR REMARK 3 T11: 0.2372 T22: 0.3109 REMARK 3 T33: 0.3354 T12: 0.0463 REMARK 3 T13: -0.0525 T23: 0.0973 REMARK 3 L TENSOR REMARK 3 L11: 1.2507 L22: 0.9826 REMARK 3 L33: 0.9057 L12: -0.4088 REMARK 3 L13: -0.2589 L23: -0.0004 REMARK 3 S TENSOR REMARK 3 S11: 0.1013 S12: -0.0125 S13: 0.1390 REMARK 3 S21: -0.1658 S22: 0.0485 S23: 0.2867 REMARK 3 S31: -0.1084 S32: -0.1446 S33: 0.0359 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 167:187) REMARK 3 ORIGIN FOR THE GROUP (A): 25.8097 30.5369 13.5809 REMARK 3 T TENSOR REMARK 3 T11: 0.2811 T22: 0.4400 REMARK 3 T33: 0.7199 T12: -0.0328 REMARK 3 T13: -0.1109 T23: 0.2154 REMARK 3 L TENSOR REMARK 3 L11: 0.0811 L22: 0.2205 REMARK 3 L33: 0.2345 L12: -0.1606 REMARK 3 L13: -0.0399 L23: 0.0635 REMARK 3 S TENSOR REMARK 3 S11: 0.0272 S12: 0.0074 S13: 0.0634 REMARK 3 S21: -0.0543 S22: 0.1269 S23: 0.6363 REMARK 3 S31: 0.1679 S32: -0.3079 S33: 0.1959 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 188:227) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1651 27.2776 19.9690 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.6043 REMARK 3 T33: 1.0964 T12: -0.0254 REMARK 3 T13: -0.0018 T23: 0.2643 REMARK 3 L TENSOR REMARK 3 L11: 0.4334 L22: 0.6325 REMARK 3 L33: 0.7423 L12: 0.0265 REMARK 3 L13: -0.3044 L23: 0.2210 REMARK 3 S TENSOR REMARK 3 S11: 0.0461 S12: -0.4907 S13: -0.7242 REMARK 3 S21: -0.1766 S22: 0.2052 S23: 0.9716 REMARK 3 S31: -0.0594 S32: -0.4278 S33: 0.1002 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 228:250) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2918 26.2637 29.5601 REMARK 3 T TENSOR REMARK 3 T11: 0.4154 T22: 0.6094 REMARK 3 T33: 0.5123 T12: -0.0425 REMARK 3 T13: 0.0442 T23: 0.2287 REMARK 3 L TENSOR REMARK 3 L11: 0.3875 L22: 0.2778 REMARK 3 L33: 0.5819 L12: 0.0178 REMARK 3 L13: -0.2662 L23: -0.1858 REMARK 3 S TENSOR REMARK 3 S11: 0.0608 S12: -0.7209 S13: -0.1132 REMARK 3 S21: 0.4947 S22: 0.0784 S23: 0.3453 REMARK 3 S31: -0.2161 S32: 0.1822 S33: 0.0438 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 251:284) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6589 14.0329 15.6778 REMARK 3 T TENSOR REMARK 3 T11: 0.3401 T22: 0.2781 REMARK 3 T33: 1.0018 T12: -0.1463 REMARK 3 T13: -0.1161 T23: 0.2375 REMARK 3 L TENSOR REMARK 3 L11: 0.7497 L22: 0.2349 REMARK 3 L33: 0.3913 L12: -0.2856 REMARK 3 L13: -0.2100 L23: 0.3426 REMARK 3 S TENSOR REMARK 3 S11: -0.1649 S12: -0.4838 S13: -0.9283 REMARK 3 S21: 0.1874 S22: 0.3742 S23: 0.6777 REMARK 3 S31: 0.3705 S32: 0.1264 S33: 0.1691 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 285:310) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6639 31.7704 -0.1317 REMARK 3 T TENSOR REMARK 3 T11: 0.3574 T22: 0.4537 REMARK 3 T33: 0.3688 T12: 0.0003 REMARK 3 T13: -0.1922 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.4747 L22: 0.7955 REMARK 3 L33: 0.3346 L12: -0.0350 REMARK 3 L13: -0.2484 L23: 0.1352 REMARK 3 S TENSOR REMARK 3 S11: 0.1254 S12: 0.3700 S13: -0.3911 REMARK 3 S21: -0.8663 S22: 0.0038 S23: 0.1530 REMARK 3 S31: 0.2083 S32: -0.0761 S33: 0.1134 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 11:19) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6543 80.9968 25.7517 REMARK 3 T TENSOR REMARK 3 T11: -0.1137 T22: 0.4650 REMARK 3 T33: 0.6847 T12: 0.9407 REMARK 3 T13: 0.1841 T23: -0.1993 REMARK 3 L TENSOR REMARK 3 L11: 0.1652 L22: 0.1370 REMARK 3 L33: 0.1269 L12: -0.0920 REMARK 3 L13: 0.0713 L23: 0.0645 REMARK 3 S TENSOR REMARK 3 S11: -0.1739 S12: -0.0972 S13: 0.0063 REMARK 3 S21: 0.0635 S22: -0.2017 S23: 0.4259 REMARK 3 S31: -0.3573 S32: -0.3797 S33: -0.1374 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 20:45) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5716 72.0389 32.8567 REMARK 3 T TENSOR REMARK 3 T11: 0.7281 T22: 0.5416 REMARK 3 T33: 0.6927 T12: 0.2141 REMARK 3 T13: 0.1070 T23: -0.1009 REMARK 3 L TENSOR REMARK 3 L11: 0.1387 L22: 0.1408 REMARK 3 L33: 0.2506 L12: -0.0454 REMARK 3 L13: 0.1060 L23: 0.1039 REMARK 3 S TENSOR REMARK 3 S11: -0.2340 S12: 0.3602 S13: -0.2496 REMARK 3 S21: 0.6770 S22: -0.0018 S23: -0.1049 REMARK 3 S31: 0.0769 S32: 0.1194 S33: -0.0030 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 46:57) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9449 71.1220 37.1208 REMARK 3 T TENSOR REMARK 3 T11: 0.9651 T22: 0.8508 REMARK 3 T33: 1.1534 T12: 0.0605 REMARK 3 T13: 0.3564 T23: -0.4434 REMARK 3 L TENSOR REMARK 3 L11: 0.2258 L22: 0.1056 REMARK 3 L33: 0.3595 L12: -0.0118 REMARK 3 L13: 0.1399 L23: -0.1871 REMARK 3 S TENSOR REMARK 3 S11: -0.3077 S12: 0.0554 S13: -0.0269 REMARK 3 S21: 0.5094 S22: -0.2599 S23: 0.5690 REMARK 3 S31: 0.0216 S32: -0.3506 S33: -0.0861 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 58:87) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0017 71.9763 23.6929 REMARK 3 T TENSOR REMARK 3 T11: 0.5695 T22: 0.6856 REMARK 3 T33: 0.6769 T12: 0.2418 REMARK 3 T13: 0.0482 T23: -0.2638 REMARK 3 L TENSOR REMARK 3 L11: 0.2172 L22: 0.1097 REMARK 3 L33: 0.1958 L12: -0.0093 REMARK 3 L13: 0.1340 L23: -0.0517 REMARK 3 S TENSOR REMARK 3 S11: 0.0711 S12: 0.5306 S13: -0.0913 REMARK 3 S21: -0.5124 S22: -0.6259 S23: 0.6291 REMARK 3 S31: -0.3057 S32: -0.6768 S33: -0.0248 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 88:104) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0350 70.4747 19.7621 REMARK 3 T TENSOR REMARK 3 T11: 0.5211 T22: 0.8633 REMARK 3 T33: 1.2558 T12: 0.3786 REMARK 3 T13: -0.3221 T23: -0.3357 REMARK 3 L TENSOR REMARK 3 L11: 1.4010 L22: 0.0352 REMARK 3 L33: 0.9019 L12: 0.1562 REMARK 3 L13: -0.8150 L23: -0.2348 REMARK 3 S TENSOR REMARK 3 S11: -0.5468 S12: -0.0384 S13: 0.4041 REMARK 3 S21: -0.4677 S22: -0.3326 S23: 0.5329 REMARK 3 S31: -0.1667 S32: -0.6894 S33: -0.5681 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 105:153) REMARK 3 ORIGIN FOR THE GROUP (A): 30.2563 50.9159 24.8956 REMARK 3 T TENSOR REMARK 3 T11: 0.3085 T22: 0.6319 REMARK 3 T33: 0.6117 T12: 0.0688 REMARK 3 T13: 0.0719 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.2147 L22: 0.6068 REMARK 3 L33: 0.1150 L12: -0.1839 REMARK 3 L13: -0.1641 L23: -0.0990 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.6935 S13: 0.2055 REMARK 3 S21: 0.3173 S22: -0.0510 S23: 0.2112 REMARK 3 S31: 0.1261 S32: -0.1612 S33: -0.0000 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 1:32) REMARK 3 ORIGIN FOR THE GROUP (A): 59.7793 61.0279 79.2349 REMARK 3 T TENSOR REMARK 3 T11: 0.5681 T22: 0.5734 REMARK 3 T33: 0.3604 T12: -0.0071 REMARK 3 T13: 0.0656 T23: -0.1124 REMARK 3 L TENSOR REMARK 3 L11: 0.5113 L22: 0.3492 REMARK 3 L33: 0.1973 L12: 0.3446 REMARK 3 L13: -0.0899 L23: 0.0702 REMARK 3 S TENSOR REMARK 3 S11: 0.1032 S12: -0.3296 S13: 0.5805 REMARK 3 S21: 0.4872 S22: -0.0052 S23: 0.4150 REMARK 3 S31: -0.4624 S32: -0.3194 S33: 0.0235 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 33:53) REMARK 3 ORIGIN FOR THE GROUP (A): 59.9118 45.0782 76.9285 REMARK 3 T TENSOR REMARK 3 T11: 0.4756 T22: 0.5967 REMARK 3 T33: 0.3150 T12: -0.0372 REMARK 3 T13: -0.0119 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 0.1886 L22: 0.1894 REMARK 3 L33: -0.0011 L12: 0.0037 REMARK 3 L13: 0.0230 L23: 0.0195 REMARK 3 S TENSOR REMARK 3 S11: 0.0793 S12: -0.3138 S13: -0.1034 REMARK 3 S21: 0.2333 S22: 0.1003 S23: -0.0285 REMARK 3 S31: 0.2236 S32: -0.0202 S33: -0.0001 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 54:166) REMARK 3 ORIGIN FOR THE GROUP (A): 59.1858 52.3380 67.7748 REMARK 3 T TENSOR REMARK 3 T11: 0.4383 T22: 0.4007 REMARK 3 T33: 0.3173 T12: 0.0112 REMARK 3 T13: 0.0263 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.6860 L22: 0.4017 REMARK 3 L33: 0.8673 L12: 0.3066 REMARK 3 L13: 0.2392 L23: 0.0414 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: -0.0457 S13: 0.1462 REMARK 3 S21: -0.0037 S22: 0.0071 S23: 0.0279 REMARK 3 S31: -0.1527 S32: -0.0300 S33: -0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 167:187) REMARK 3 ORIGIN FOR THE GROUP (A): 68.5009 69.3431 66.0251 REMARK 3 T TENSOR REMARK 3 T11: 0.6685 T22: 0.4081 REMARK 3 T33: 0.5611 T12: -0.0408 REMARK 3 T13: 0.0104 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 0.1228 L22: 0.0661 REMARK 3 L33: 0.1102 L12: -0.0763 REMARK 3 L13: -0.0998 L23: -0.0386 REMARK 3 S TENSOR REMARK 3 S11: -0.0605 S12: 0.2147 S13: 0.6225 REMARK 3 S21: -0.1261 S22: 0.1494 S23: 0.3469 REMARK 3 S31: -0.8523 S32: -0.1169 S33: -0.0002 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 188:218) REMARK 3 ORIGIN FOR THE GROUP (A): 69.5332 72.8934 57.8469 REMARK 3 T TENSOR REMARK 3 T11: 0.8453 T22: 0.5585 REMARK 3 T33: 0.6017 T12: -0.0599 REMARK 3 T13: 0.0820 T23: 0.0725 REMARK 3 L TENSOR REMARK 3 L11: 0.1335 L22: 0.1272 REMARK 3 L33: 0.1606 L12: 0.0890 REMARK 3 L13: -0.0291 L23: -0.1067 REMARK 3 S TENSOR REMARK 3 S11: -0.3937 S12: 0.4057 S13: 0.7604 REMARK 3 S21: -0.9498 S22: 0.3853 S23: 0.0884 REMARK 3 S31: -0.9046 S32: 0.4984 S33: -0.0045 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 219:236) REMARK 3 ORIGIN FOR THE GROUP (A): 73.5573 61.1423 58.1945 REMARK 3 T TENSOR REMARK 3 T11: 0.6146 T22: 0.4975 REMARK 3 T33: 0.4756 T12: -0.0752 REMARK 3 T13: 0.0436 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.1094 L22: 0.0745 REMARK 3 L33: 0.1666 L12: 0.0096 REMARK 3 L13: -0.1801 L23: -0.0118 REMARK 3 S TENSOR REMARK 3 S11: 0.0652 S12: 0.0697 S13: 0.9297 REMARK 3 S21: -0.1161 S22: -0.2718 S23: 0.1629 REMARK 3 S31: 0.0159 S32: -0.0743 S33: 0.0002 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 237:261) REMARK 3 ORIGIN FOR THE GROUP (A): 80.7154 61.9370 55.1788 REMARK 3 T TENSOR REMARK 3 T11: 0.7466 T22: 0.8155 REMARK 3 T33: 0.5552 T12: -0.0983 REMARK 3 T13: 0.1621 T23: -0.0840 REMARK 3 L TENSOR REMARK 3 L11: 0.0786 L22: 0.2909 REMARK 3 L33: 0.0592 L12: 0.0248 REMARK 3 L13: -0.0381 L23: -0.2272 REMARK 3 S TENSOR REMARK 3 S11: 0.1356 S12: 0.3381 S13: -0.1267 REMARK 3 S21: -0.6193 S22: 0.1932 S23: -0.4186 REMARK 3 S31: -0.3279 S32: 0.1366 S33: 0.0001 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESSEQ 262:310) REMARK 3 ORIGIN FOR THE GROUP (A): 73.3967 54.5512 71.7543 REMARK 3 T TENSOR REMARK 3 T11: 0.4962 T22: 0.4564 REMARK 3 T33: 0.3719 T12: -0.0232 REMARK 3 T13: 0.0309 T23: -0.0718 REMARK 3 L TENSOR REMARK 3 L11: 0.3050 L22: 0.9254 REMARK 3 L33: 0.2219 L12: -0.0939 REMARK 3 L13: 0.3362 L23: -0.3647 REMARK 3 S TENSOR REMARK 3 S11: -0.0501 S12: -0.1883 S13: 0.1485 REMARK 3 S21: 0.1860 S22: -0.0815 S23: -0.2715 REMARK 3 S31: -0.1406 S32: 0.1417 S33: -0.0000 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 11:67) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1397 78.6301 44.9853 REMARK 3 T TENSOR REMARK 3 T11: 1.0138 T22: 0.6126 REMARK 3 T33: 0.5833 T12: 0.1727 REMARK 3 T13: 0.1524 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 0.5746 L22: 0.3161 REMARK 3 L33: 0.5009 L12: -0.1901 REMARK 3 L13: 0.4490 L23: 0.1206 REMARK 3 S TENSOR REMARK 3 S11: -0.4757 S12: -0.0493 S13: 0.0229 REMARK 3 S21: 0.7253 S22: -0.0624 S23: 0.2351 REMARK 3 S31: 0.3645 S32: 0.2308 S33: -0.0401 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 68:87) REMARK 3 ORIGIN FOR THE GROUP (A): 30.6685 79.0383 53.5138 REMARK 3 T TENSOR REMARK 3 T11: 1.2761 T22: 0.8850 REMARK 3 T33: 0.6488 T12: 0.3338 REMARK 3 T13: -0.0775 T23: -0.2228 REMARK 3 L TENSOR REMARK 3 L11: 0.0352 L22: 0.0632 REMARK 3 L33: 0.0351 L12: 0.0699 REMARK 3 L13: -0.0230 L23: -0.0410 REMARK 3 S TENSOR REMARK 3 S11: -0.1014 S12: -0.1568 S13: -0.1646 REMARK 3 S21: 0.9988 S22: 0.1049 S23: 0.5400 REMARK 3 S31: 0.2823 S32: -0.0600 S33: 0.0019 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 88:138) REMARK 3 ORIGIN FOR THE GROUP (A): 40.9470 71.6310 55.6998 REMARK 3 T TENSOR REMARK 3 T11: 1.0345 T22: 0.4389 REMARK 3 T33: 0.5798 T12: 0.1420 REMARK 3 T13: -0.3316 T23: -0.0167 REMARK 3 L TENSOR REMARK 3 L11: 1.3185 L22: 0.3044 REMARK 3 L33: 0.1543 L12: -0.1645 REMARK 3 L13: -0.3957 L23: -0.0715 REMARK 3 S TENSOR REMARK 3 S11: -0.2349 S12: -0.0927 S13: 0.2075 REMARK 3 S21: 0.2811 S22: -0.2188 S23: -0.0980 REMARK 3 S31: -0.7005 S32: 0.0593 S33: -0.4948 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESSEQ 139:153) REMARK 3 ORIGIN FOR THE GROUP (A): 48.9291 67.9905 52.7663 REMARK 3 T TENSOR REMARK 3 T11: 1.4921 T22: -0.0600 REMARK 3 T33: 0.0272 T12: 0.1110 REMARK 3 T13: -0.3508 T23: 0.6826 REMARK 3 L TENSOR REMARK 3 L11: 0.2188 L22: 0.7089 REMARK 3 L33: 0.8840 L12: 0.3173 REMARK 3 L13: -0.1103 L23: -0.5948 REMARK 3 S TENSOR REMARK 3 S11: -0.6237 S12: 0.4863 S13: -0.1487 REMARK 3 S21: -0.9990 S22: -0.5605 S23: -0.5485 REMARK 3 S31: -0.7190 S32: 0.2262 S33: -0.5455 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4F04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072286. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.95 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : DOUBLE SILICON (111) CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59217 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 23.20 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.4570 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 20.40 REMARK 200 R MERGE FOR SHELL (I) : 0.69800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM MALEIC ACID, 3 MM SODIUM AZIDE, REMARK 280 1 MM PALA, ADJUSTED TO PH=5.95 WITH N-ETHYLMORPHOLINE, REMARK 280 MICRODIALYSIS, TEMPERATURE 298K, PH 5.95 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 34300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 99820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -114.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 121.27700 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 60.63850 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 105.02896 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 586 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 HIS B 3 REMARK 465 ASP B 4 REMARK 465 ASN B 5 REMARK 465 LYS B 6 REMARK 465 LEU B 7 REMARK 465 GLN B 8 REMARK 465 VAL B 9 REMARK 465 GLU B 10 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 HIS D 3 REMARK 465 ASP D 4 REMARK 465 ASN D 5 REMARK 465 LYS D 6 REMARK 465 LEU D 7 REMARK 465 GLN D 8 REMARK 465 VAL D 9 REMARK 465 GLU D 10 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 50 O2G UTP B 202 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 N ALA A 1 OE1 GLU B 101 4555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 132 -90.76 -83.62 REMARK 500 LEU A 267 158.70 68.05 REMARK 500 VAL A 270 -90.65 -102.25 REMARK 500 TRP A 284 13.06 -142.94 REMARK 500 GLN B 24 -0.20 65.69 REMARK 500 SER B 50 -94.22 -111.33 REMARK 500 ASN B 105 -44.42 76.54 REMARK 500 ASN C 132 -84.03 -89.65 REMARK 500 LEU C 267 155.09 74.44 REMARK 500 VAL C 270 -85.52 -101.77 REMARK 500 TRP C 284 19.13 -148.62 REMARK 500 GLU D 37 39.77 -95.30 REMARK 500 VAL D 91 91.07 -66.18 REMARK 500 ASN D 105 -33.11 82.21 REMARK 500 ALA D 131 -85.57 52.84 REMARK 500 TYR D 140 -67.10 -92.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 109 SG REMARK 620 2 CYS B 114 SG 115.1 REMARK 620 3 CYS B 138 SG 110.9 105.5 REMARK 620 4 CYS B 141 SG 105.0 111.5 108.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 109 SG REMARK 620 2 CYS D 114 SG 116.5 REMARK 620 3 CYS D 138 SG 112.8 108.8 REMARK 620 4 CYS D 141 SG 96.3 115.0 106.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PAL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PAL C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UTP D 202 DBREF 4F04 A 1 310 UNP P0A786 PYRB_ECOLI 2 311 DBREF 4F04 B 1 153 UNP P0A7F3 PYRI_ECOLI 1 153 DBREF 4F04 C 1 310 UNP P0A786 PYRB_ECOLI 2 311 DBREF 4F04 D 1 153 UNP P0A7F3 PYRI_ECOLI 1 153 SEQRES 1 A 310 ALA ASN PRO LEU TYR GLN LYS HIS ILE ILE SER ILE ASN SEQRES 2 A 310 ASP LEU SER ARG ASP ASP LEU ASN LEU VAL LEU ALA THR SEQRES 3 A 310 ALA ALA LYS LEU LYS ALA ASN PRO GLN PRO GLU LEU LEU SEQRES 4 A 310 LYS HIS LYS VAL ILE ALA SER CYS PHE PHE GLU ALA SER SEQRES 5 A 310 THR ARG THR ARG LEU SER PHE GLU THR SER MET HIS ARG SEQRES 6 A 310 LEU GLY ALA SER VAL VAL GLY PHE SER ASP SER ALA ASN SEQRES 7 A 310 THR SER LEU GLY LYS LYS GLY GLU THR LEU ALA ASP THR SEQRES 8 A 310 ILE SER VAL ILE SER THR TYR VAL ASP ALA ILE VAL MET SEQRES 9 A 310 ARG HIS PRO GLN GLU GLY ALA ALA ARG LEU ALA THR GLU SEQRES 10 A 310 PHE SER GLY ASN VAL PRO VAL LEU ASN ALA GLY ASP GLY SEQRES 11 A 310 SER ASN GLN HIS PRO THR GLN THR LEU LEU ASP LEU PHE SEQRES 12 A 310 THR ILE GLN GLU THR GLN GLY ARG LEU ASP ASN LEU HIS SEQRES 13 A 310 VAL ALA MET VAL GLY ASP LEU LYS TYR GLY ARG THR VAL SEQRES 14 A 310 HIS SER LEU THR GLN ALA LEU ALA LYS PHE ASP GLY ASN SEQRES 15 A 310 ARG PHE TYR PHE ILE ALA PRO ASP ALA LEU ALA MET PRO SEQRES 16 A 310 GLN TYR ILE LEU ASP MET LEU ASP GLU LYS GLY ILE ALA SEQRES 17 A 310 TRP SER LEU HIS SER SER ILE GLU GLU VAL MET ALA GLU SEQRES 18 A 310 VAL ASP ILE LEU TYR MET THR ARG VAL GLN LYS GLU ARG SEQRES 19 A 310 LEU ASP PRO SER GLU TYR ALA ASN VAL LYS ALA GLN PHE SEQRES 20 A 310 VAL LEU ARG ALA SER ASP LEU HIS ASN ALA LYS ALA ASN SEQRES 21 A 310 MET LYS VAL LEU HIS PRO LEU PRO ARG VAL ASP GLU ILE SEQRES 22 A 310 ALA THR ASP VAL ASP LYS THR PRO HIS ALA TRP TYR PHE SEQRES 23 A 310 GLN GLN ALA GLY ASN GLY ILE PHE ALA ARG GLN ALA LEU SEQRES 24 A 310 LEU ALA LEU VAL LEU ASN ARG ASP LEU VAL LEU SEQRES 1 B 153 MET THR HIS ASP ASN LYS LEU GLN VAL GLU ALA ILE LYS SEQRES 2 B 153 ARG GLY THR VAL ILE ASP HIS ILE PRO ALA GLN ILE GLY SEQRES 3 B 153 PHE LYS LEU LEU SER LEU PHE LYS LEU THR GLU THR ASP SEQRES 4 B 153 GLN ARG ILE THR ILE GLY LEU ASN LEU PRO SER GLY GLU SEQRES 5 B 153 MET GLY ARG LYS ASP LEU ILE LYS ILE GLU ASN THR PHE SEQRES 6 B 153 LEU SER GLU ASP GLN VAL ASP GLN LEU ALA LEU TYR ALA SEQRES 7 B 153 PRO GLN ALA THR VAL ASN ARG ILE ASP ASN TYR GLU VAL SEQRES 8 B 153 VAL GLY LYS SER ARG PRO SER LEU PRO GLU ARG ILE ASP SEQRES 9 B 153 ASN VAL LEU VAL CYS PRO ASN SER ASN CYS ILE SER HIS SEQRES 10 B 153 ALA GLU PRO VAL SER SER SER PHE ALA VAL ARG LYS ARG SEQRES 11 B 153 ALA ASN ASP ILE ALA LEU LYS CYS LYS TYR CYS GLU LYS SEQRES 12 B 153 GLU PHE SER HIS ASN VAL VAL LEU ALA ASN SEQRES 1 C 310 ALA ASN PRO LEU TYR GLN LYS HIS ILE ILE SER ILE ASN SEQRES 2 C 310 ASP LEU SER ARG ASP ASP LEU ASN LEU VAL LEU ALA THR SEQRES 3 C 310 ALA ALA LYS LEU LYS ALA ASN PRO GLN PRO GLU LEU LEU SEQRES 4 C 310 LYS HIS LYS VAL ILE ALA SER CYS PHE PHE GLU ALA SER SEQRES 5 C 310 THR ARG THR ARG LEU SER PHE GLU THR SER MET HIS ARG SEQRES 6 C 310 LEU GLY ALA SER VAL VAL GLY PHE SER ASP SER ALA ASN SEQRES 7 C 310 THR SER LEU GLY LYS LYS GLY GLU THR LEU ALA ASP THR SEQRES 8 C 310 ILE SER VAL ILE SER THR TYR VAL ASP ALA ILE VAL MET SEQRES 9 C 310 ARG HIS PRO GLN GLU GLY ALA ALA ARG LEU ALA THR GLU SEQRES 10 C 310 PHE SER GLY ASN VAL PRO VAL LEU ASN ALA GLY ASP GLY SEQRES 11 C 310 SER ASN GLN HIS PRO THR GLN THR LEU LEU ASP LEU PHE SEQRES 12 C 310 THR ILE GLN GLU THR GLN GLY ARG LEU ASP ASN LEU HIS SEQRES 13 C 310 VAL ALA MET VAL GLY ASP LEU LYS TYR GLY ARG THR VAL SEQRES 14 C 310 HIS SER LEU THR GLN ALA LEU ALA LYS PHE ASP GLY ASN SEQRES 15 C 310 ARG PHE TYR PHE ILE ALA PRO ASP ALA LEU ALA MET PRO SEQRES 16 C 310 GLN TYR ILE LEU ASP MET LEU ASP GLU LYS GLY ILE ALA SEQRES 17 C 310 TRP SER LEU HIS SER SER ILE GLU GLU VAL MET ALA GLU SEQRES 18 C 310 VAL ASP ILE LEU TYR MET THR ARG VAL GLN LYS GLU ARG SEQRES 19 C 310 LEU ASP PRO SER GLU TYR ALA ASN VAL LYS ALA GLN PHE SEQRES 20 C 310 VAL LEU ARG ALA SER ASP LEU HIS ASN ALA LYS ALA ASN SEQRES 21 C 310 MET LYS VAL LEU HIS PRO LEU PRO ARG VAL ASP GLU ILE SEQRES 22 C 310 ALA THR ASP VAL ASP LYS THR PRO HIS ALA TRP TYR PHE SEQRES 23 C 310 GLN GLN ALA GLY ASN GLY ILE PHE ALA ARG GLN ALA LEU SEQRES 24 C 310 LEU ALA LEU VAL LEU ASN ARG ASP LEU VAL LEU SEQRES 1 D 153 MET THR HIS ASP ASN LYS LEU GLN VAL GLU ALA ILE LYS SEQRES 2 D 153 ARG GLY THR VAL ILE ASP HIS ILE PRO ALA GLN ILE GLY SEQRES 3 D 153 PHE LYS LEU LEU SER LEU PHE LYS LEU THR GLU THR ASP SEQRES 4 D 153 GLN ARG ILE THR ILE GLY LEU ASN LEU PRO SER GLY GLU SEQRES 5 D 153 MET GLY ARG LYS ASP LEU ILE LYS ILE GLU ASN THR PHE SEQRES 6 D 153 LEU SER GLU ASP GLN VAL ASP GLN LEU ALA LEU TYR ALA SEQRES 7 D 153 PRO GLN ALA THR VAL ASN ARG ILE ASP ASN TYR GLU VAL SEQRES 8 D 153 VAL GLY LYS SER ARG PRO SER LEU PRO GLU ARG ILE ASP SEQRES 9 D 153 ASN VAL LEU VAL CYS PRO ASN SER ASN CYS ILE SER HIS SEQRES 10 D 153 ALA GLU PRO VAL SER SER SER PHE ALA VAL ARG LYS ARG SEQRES 11 D 153 ALA ASN ASP ILE ALA LEU LYS CYS LYS TYR CYS GLU LYS SEQRES 12 D 153 GLU PHE SER HIS ASN VAL VAL LEU ALA ASN HET PAL A 401 16 HET ZN B 201 1 HET UTP B 202 29 HET PAL C 401 16 HET ZN D 201 1 HET UTP D 202 29 HETNAM PAL N-(PHOSPHONACETYL)-L-ASPARTIC ACID HETNAM ZN ZINC ION HETNAM UTP URIDINE 5'-TRIPHOSPHATE FORMUL 5 PAL 2(C6 H10 N O8 P) FORMUL 6 ZN 2(ZN 2+) FORMUL 7 UTP 2(C9 H15 N2 O15 P3) FORMUL 11 HOH *291(H2 O) HELIX 1 1 SER A 11 LEU A 15 5 5 HELIX 2 2 SER A 16 ASN A 33 1 18 HELIX 3 3 THR A 53 LEU A 66 1 14 HELIX 4 4 ASP A 75 ASN A 78 5 4 HELIX 5 5 THR A 79 LYS A 84 1 6 HELIX 6 6 THR A 87 SER A 96 1 10 HELIX 7 7 GLY A 110 GLU A 117 1 8 HELIX 8 8 HIS A 134 GLY A 150 1 17 HELIX 9 9 GLY A 166 ALA A 177 1 12 HELIX 10 10 PRO A 189 ALA A 193 5 5 HELIX 11 11 PRO A 195 LYS A 205 1 11 HELIX 12 12 ILE A 215 ALA A 220 1 6 HELIX 13 13 ASP A 236 VAL A 243 5 8 HELIX 14 14 ARG A 250 HIS A 255 5 6 HELIX 15 15 ALA A 274 ASP A 278 5 5 HELIX 16 16 TRP A 284 ASN A 305 1 22 HELIX 17 17 ILE B 25 PHE B 33 1 9 HELIX 18 18 SER B 67 LEU B 74 1 8 HELIX 19 19 ALA B 75 TYR B 77 5 3 HELIX 20 20 CYS B 114 ALA B 118 5 5 HELIX 21 21 ASN B 148 VAL B 150 5 3 HELIX 22 22 SER C 11 LEU C 15 5 5 HELIX 23 23 SER C 16 ASN C 33 1 18 HELIX 24 24 THR C 53 LEU C 66 1 14 HELIX 25 25 THR C 79 LYS C 84 1 6 HELIX 26 26 THR C 87 SER C 96 1 10 HELIX 27 27 GLY C 110 GLU C 117 1 8 HELIX 28 28 HIS C 134 GLY C 150 1 17 HELIX 29 29 GLY C 166 ALA C 177 1 12 HELIX 30 30 PRO C 189 ALA C 193 5 5 HELIX 31 31 PRO C 195 LYS C 205 1 11 HELIX 32 32 VAL C 218 VAL C 222 5 5 HELIX 33 33 ASP C 236 VAL C 243 5 8 HELIX 34 34 ARG C 250 HIS C 255 5 6 HELIX 35 35 ALA C 274 ASP C 278 5 5 HELIX 36 36 TRP C 284 ASN C 291 1 8 HELIX 37 37 ASN C 291 ASN C 305 1 15 HELIX 38 38 ILE D 25 PHE D 33 1 9 HELIX 39 39 SER D 67 ALA D 78 1 12 SHEET 1 A 4 SER A 69 PHE A 73 0 SHEET 2 A 4 VAL A 43 PHE A 48 1 N SER A 46 O VAL A 71 SHEET 3 A 4 ALA A 101 HIS A 106 1 O VAL A 103 N CYS A 47 SHEET 4 A 4 VAL A 124 ASP A 129 1 O LEU A 125 N ILE A 102 SHEET 1 B 5 ALA A 208 LEU A 211 0 SHEET 2 B 5 ARG A 183 ILE A 187 1 N PHE A 186 O SER A 210 SHEET 3 B 5 HIS A 156 VAL A 160 1 N VAL A 157 O ARG A 183 SHEET 4 B 5 ILE A 224 MET A 227 1 O TYR A 226 N ALA A 158 SHEET 5 B 5 LYS A 262 LEU A 264 1 O LEU A 264 N MET A 227 SHEET 1 C10 GLU B 90 SER B 95 0 SHEET 2 C10 THR B 82 ASP B 87 -1 N ASP B 87 O GLU B 90 SHEET 3 C10 GLY B 15 ILE B 21 -1 N ASP B 19 O THR B 82 SHEET 4 C10 ARG B 55 GLU B 62 -1 O ASP B 57 N ILE B 21 SHEET 5 C10 ILE B 42 PRO B 49 -1 N GLY B 45 O LEU B 58 SHEET 6 C10 ILE D 42 SER D 50 -1 O ILE D 44 N ILE B 44 SHEET 7 C10 GLY D 54 GLU D 62 -1 O LYS D 60 N THR D 43 SHEET 8 C10 GLY D 15 ILE D 21 -1 N ILE D 21 O ASP D 57 SHEET 9 C10 THR D 82 ASP D 87 -1 O THR D 82 N ASP D 19 SHEET 10 C10 GLU D 90 SER D 95 -1 O GLY D 93 N ARG D 85 SHEET 1 D 4 ARG B 102 ASP B 104 0 SHEET 2 D 4 SER B 124 ARG B 130 -1 O PHE B 125 N ILE B 103 SHEET 3 D 4 ASP B 133 CYS B 138 -1 O ASP B 133 N ARG B 130 SHEET 4 D 4 GLU B 144 SER B 146 -1 O PHE B 145 N LEU B 136 SHEET 1 E 2 LEU B 107 VAL B 108 0 SHEET 2 E 2 LEU B 151 ALA B 152 -1 O LEU B 151 N VAL B 108 SHEET 1 F 4 SER C 69 PHE C 73 0 SHEET 2 F 4 VAL C 43 PHE C 48 1 N SER C 46 O VAL C 71 SHEET 3 F 4 ALA C 101 HIS C 106 1 O VAL C 103 N CYS C 47 SHEET 4 F 4 VAL C 124 ASP C 129 1 O LEU C 125 N ILE C 102 SHEET 1 G 5 TRP C 209 HIS C 212 0 SHEET 2 G 5 ARG C 183 ILE C 187 1 N PHE C 186 O SER C 210 SHEET 3 G 5 HIS C 156 VAL C 160 1 N VAL C 157 O ARG C 183 SHEET 4 G 5 ILE C 224 MET C 227 1 O TYR C 226 N ALA C 158 SHEET 5 G 5 LYS C 262 LEU C 264 1 O LEU C 264 N MET C 227 SHEET 1 H 4 ARG D 102 ASP D 104 0 SHEET 2 H 4 SER D 124 LYS D 129 -1 O PHE D 125 N ILE D 103 SHEET 3 H 4 ILE D 134 CYS D 138 -1 O LYS D 137 N ALA D 126 SHEET 4 H 4 GLU D 144 SER D 146 -1 O PHE D 145 N LEU D 136 LINK SG CYS B 109 ZN ZN B 201 1555 1555 2.42 LINK SG CYS B 114 ZN ZN B 201 1555 1555 2.53 LINK SG CYS B 138 ZN ZN B 201 1555 1555 2.47 LINK SG CYS B 141 ZN ZN B 201 1555 1555 2.41 LINK SG CYS D 109 ZN ZN D 201 1555 1555 2.50 LINK SG CYS D 114 ZN ZN D 201 1555 1555 2.44 LINK SG CYS D 138 ZN ZN D 201 1555 1555 2.52 LINK SG CYS D 141 ZN ZN D 201 1555 1555 2.54 CISPEP 1 LEU A 267 PRO A 268 0 -3.13 CISPEP 2 LEU C 267 PRO C 268 0 0.35 SITE 1 AC1 15 SER A 52 THR A 53 ARG A 54 THR A 55 SITE 2 AC1 15 SER A 80 LYS A 84 ARG A 105 HIS A 134 SITE 3 AC1 15 GLN A 137 ARG A 167 ARG A 229 GLN A 231 SITE 4 AC1 15 LEU A 267 HOH A 505 HOH A 516 SITE 1 AC2 4 CYS B 109 CYS B 114 CYS B 138 CYS B 141 SITE 1 AC3 6 HIS B 20 SER B 50 GLY B 51 GLU B 52 SITE 2 AC3 6 LYS B 56 LYS B 60 SITE 1 AC4 16 SER C 52 THR C 53 ARG C 54 THR C 55 SITE 2 AC4 16 SER C 80 LYS C 84 ARG C 105 HIS C 134 SITE 3 AC4 16 ARG C 167 THR C 168 ARG C 229 GLN C 231 SITE 4 AC4 16 LEU C 267 HOH C 509 HOH C 514 HOH C 520 SITE 1 AC5 4 CYS D 109 CYS D 114 CYS D 138 CYS D 141 SITE 1 AC6 11 ARG B 41 HIS D 20 PRO D 49 SER D 50 SITE 2 AC6 11 GLY D 51 GLU D 52 LYS D 56 LEU D 58 SITE 3 AC6 11 LYS D 60 HOH D 317 HOH D 318 CRYST1 121.277 121.277 155.109 90.00 90.00 120.00 P 3 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008246 0.004761 0.000000 0.00000 SCALE2 0.000000 0.009521 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006447 0.00000