HEADER TRANSPORT PROTEIN 03-MAY-12 4F06 TITLE CRYSTAL STRUCTURE OF SOLUTE BINDING PROTEIN OF ABC TRANSPORTER FROM TITLE 2 RHODOPSEUDOMONAS PALUSTRIS HAA2 RPB_2270 IN COMPLEX WITH P- TITLE 3 HYDROXYBENZOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: EXTRACELLULAR LIGAND-BINDING RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 316058; SOURCE 4 STRAIN: HAA2; SOURCE 5 GENE: RPB_2270; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PMCSG7 KEYWDS PSI-BIOLOGY, MCSG, MIDWEST CENTER FOR STRUCTURAL GENOMICS, KEYWDS 2 TRANSPORTER, LIGNIN DEGRADATION PRODUCT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,J.MACK,S.ZERBS,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 3 24-OCT-12 4F06 1 JRNL REVDAT 2 12-SEP-12 4F06 1 JRNL REVDAT 1 15-AUG-12 4F06 0 JRNL AUTH K.MICHALSKA,C.CHANG,J.C.MACK,S.ZERBS,A.JOACHIMIAK, JRNL AUTH 2 F.R.COLLART JRNL TITL CHARACTERIZATION OF TRANSPORT PROTEINS FOR AROMATIC JRNL TITL 2 COMPOUNDS DERIVED FROM LIGNIN: BENZOATE DERIVATIVE BINDING JRNL TITL 3 PROTEINS. JRNL REF J.MOL.BIOL. V. 423 555 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22925578 JRNL DOI 10.1016/J.JMB.2012.08.017 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 81790 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.123 REMARK 3 R VALUE (WORKING SET) : 0.122 REMARK 3 FREE R VALUE : 0.143 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4085 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4304 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2350 REMARK 3 BIN FREE R VALUE SET COUNT : 227 REMARK 3 BIN FREE R VALUE : 0.2440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2783 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.29000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.044 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.040 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.020 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.047 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.974 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3126 ; 0.015 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4254 ; 1.716 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 413 ; 6.029 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;31.359 ;25.263 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 551 ;11.810 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ; 9.611 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 476 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2345 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3126 ; 4.211 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 93 ;28.137 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3345 ;10.650 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4F06 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAY-12. REMARK 100 THE RCSB ID CODE IS RCSB072288. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81874 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.240 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, DM, SHELXDE, RESOLVE, ARP/WARP, REMARK 200 COOT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE 0.1 M CITRIC REMARK 280 ACID, PH 3.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.06750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.08850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.58700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.08850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.06750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.58700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 465 ALA A 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O3 GOL A 410 O HOH A 879 1.68 REMARK 500 OE2 GLU A 352 O HOH A 574 1.90 REMARK 500 CA GLY A 294 O HOH A 862 1.93 REMARK 500 O3 SO4 A 406 O HOH A 820 1.95 REMARK 500 CA GLY A 295 O HOH A 853 2.04 REMARK 500 OE1 GLU A 86 O HOH A 841 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 86 OE1 - CD - OE2 ANGL. DEV. = -7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 73 -61.16 66.19 REMARK 500 ASN A 76 82.91 -163.78 REMARK 500 LEU A 99 89.47 75.69 REMARK 500 ASN A 123 -63.23 -153.77 REMARK 500 ALA A 124 126.66 -39.14 REMARK 500 SER A 140 -91.98 -96.07 REMARK 500 ASP A 327 77.53 -161.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 411 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 876 O REMARK 620 2 HOH A 767 O 142.6 REMARK 620 3 HOH A 531 O 130.9 71.0 REMARK 620 4 GLU A 352 O 90.9 117.9 98.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PHB A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PHB A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC102210 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4EYO RELATED DB: PDB REMARK 900 RELATED ID: 4EYQ RELATED DB: PDB DBREF 4F06 A 23 391 UNP Q2IXT5 Q2IXT5_RHOP2 23 391 SEQADV 4F06 SER A 21 UNP Q2IXT5 EXPRESSION TAG SEQADV 4F06 ASN A 22 UNP Q2IXT5 EXPRESSION TAG SEQRES 1 A 371 SER ASN ALA ASP THR ILE LYS VAL GLY VAL ILE GLY THR SEQRES 2 A 371 MSE SER GLY PRO TYR ALA LEU PHE GLY LYS ASN TYR LYS SEQRES 3 A 371 MSE GLY ILE ASP ALA TRP VAL ALA GLU HIS GLY ASN LYS SEQRES 4 A 371 VAL ALA GLY HIS THR VAL GLU PHE VAL TYR ARG ASP GLU SEQRES 5 A 371 VAL SER PRO ASN PRO ALA GLN SER LYS ALA LEU ALA GLN SEQRES 6 A 371 GLU LEU ILE VAL LYS GLU LYS VAL GLN TYR LEU ALA GLY SEQRES 7 A 371 LEU TYR PHE THR PRO ASN ALA MSE ALA VAL ALA PRO LEU SEQRES 8 A 371 LEU GLN GLU ALA LYS VAL PRO MSE VAL VAL MSE ASN ALA SEQRES 9 A 371 ALA THR SER SER ILE THR GLU LYS SER PRO TYR ILE VAL SEQRES 10 A 371 ARG THR SER PHE THR MSE PHE GLN ASN THR VAL PRO ALA SEQRES 11 A 371 ALA LYS VAL ALA LYS GLN LYS GLY ALA THR LYS VAL ALA SEQRES 12 A 371 ILE ALA VAL SER ASP TYR GLY PRO GLY ILE ASP ALA GLU SEQRES 13 A 371 THR ALA PHE LYS LYS THR PHE GLU ALA GLU GLY GLY LYS SEQRES 14 A 371 VAL VAL GLU ALA VAL ARG MSE PRO LEU SER THR THR ASP SEQRES 15 A 371 PHE GLY PRO ILE MSE GLN ARG ILE LYS ASN SER GLY ALA SEQRES 16 A 371 ASP MSE ILE PHE THR PHE LEU PRO ALA GLY PRO PRO THR SEQRES 17 A 371 LEU GLY PHE VAL LYS ALA TYR ILE ASP ASN GLY LEU LYS SEQRES 18 A 371 ALA GLY GLY VAL LYS LEU MSE SER THR GLY ASP VAL VAL SEQRES 19 A 371 THR GLU PRO ASP LEU PRO ASN ILE GLY GLU ALA GLY LEU SEQRES 20 A 371 GLY ILE LEU SER THR TYR HIS TYR ALA VAL SER HIS ASP SEQRES 21 A 371 SER PRO GLU ASN LYS ALA PHE LEU ALA LEU LEU GLN LYS SEQRES 22 A 371 GLY GLY ALA LYS LEU ASP GLU VAL THR MSE THR SER VAL SEQRES 23 A 371 ALA ALA TYR ASP GLY ALA ARG LEU ILE TYR LYS MSE ILE SEQRES 24 A 371 GLU ALA THR SER GLY LYS SER ASP PRO ASP LYS ALA ILE SEQRES 25 A 371 ALA ALA VAL LYS GLY MSE LYS TRP VAL SER PRO ARG GLY SEQRES 26 A 371 GLU VAL SER ILE ASP PRO GLU THR ARG HIS ILE THR GLN SEQRES 27 A 371 ASN VAL TYR LEU ARG GLU VAL GLU LYS VAL ASP GLY LYS SEQRES 28 A 371 LEU ILE ASN ARG GLU LEU GLU THR PHE LYS ALA GLN PRO SEQRES 29 A 371 ASP TRP GLY LEU ALA LYS GLN MODRES 4F06 MSE A 34 MET SELENOMETHIONINE MODRES 4F06 MSE A 47 MET SELENOMETHIONINE MODRES 4F06 MSE A 106 MET SELENOMETHIONINE MODRES 4F06 MSE A 119 MET SELENOMETHIONINE MODRES 4F06 MSE A 122 MET SELENOMETHIONINE MODRES 4F06 MSE A 143 MET SELENOMETHIONINE MODRES 4F06 MSE A 196 MET SELENOMETHIONINE MODRES 4F06 MSE A 207 MET SELENOMETHIONINE MODRES 4F06 MSE A 217 MET SELENOMETHIONINE MODRES 4F06 MSE A 248 MET SELENOMETHIONINE MODRES 4F06 MSE A 303 MET SELENOMETHIONINE MODRES 4F06 MSE A 318 MET SELENOMETHIONINE MODRES 4F06 MSE A 338 MET SELENOMETHIONINE HET MSE A 34 8 HET MSE A 47 8 HET MSE A 106 8 HET MSE A 119 8 HET MSE A 122 8 HET MSE A 143 8 HET MSE A 196 8 HET MSE A 207 8 HET MSE A 217 8 HET MSE A 248 8 HET MSE A 303 8 HET MSE A 318 16 HET MSE A 338 16 HET PHB A 401 10 HET PHB A 402 10 HET SO4 A 403 5 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET GOL A 408 6 HET GOL A 409 6 HET GOL A 410 6 HET NA A 411 1 HETNAM MSE SELENOMETHIONINE HETNAM PHB P-HYDROXYBENZOIC ACID HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 13(C5 H11 N O2 SE) FORMUL 2 PHB 2(C7 H6 O3) FORMUL 4 SO4 5(O4 S 2-) FORMUL 9 GOL 3(C3 H8 O3) FORMUL 12 NA NA 1+ FORMUL 13 HOH *380(H2 O) HELIX 1 1 TYR A 38 GLY A 57 1 20 HELIX 2 2 ASN A 76 LYS A 90 1 15 HELIX 3 3 PHE A 101 ALA A 109 1 9 HELIX 4 4 LEU A 111 LYS A 116 1 6 HELIX 5 5 THR A 126 SER A 133 5 8 HELIX 6 6 THR A 142 LYS A 157 1 16 HELIX 7 7 TYR A 169 GLU A 186 1 18 HELIX 8 8 PHE A 203 GLY A 214 1 12 HELIX 9 9 GLY A 225 ASN A 238 1 14 HELIX 10 10 ASP A 252 PRO A 257 5 6 HELIX 11 11 ASP A 258 GLY A 263 1 6 HELIX 12 12 GLU A 264 LEU A 267 5 4 HELIX 13 13 SER A 281 GLY A 294 1 14 HELIX 14 14 LYS A 297 VAL A 301 5 5 HELIX 15 15 THR A 302 THR A 322 1 21 HELIX 16 16 ASP A 327 LYS A 336 1 10 HELIX 17 17 ASP A 385 LYS A 390 1 6 SHEET 1 A 6 LYS A 59 VAL A 60 0 SHEET 2 A 6 HIS A 63 ASP A 71 -1 O HIS A 63 N VAL A 60 SHEET 3 A 6 THR A 25 GLY A 32 1 N VAL A 30 O VAL A 68 SHEET 4 A 6 TYR A 95 GLY A 98 1 O ALA A 97 N ILE A 31 SHEET 5 A 6 MSE A 119 VAL A 121 1 O VAL A 120 N LEU A 96 SHEET 6 A 6 ILE A 136 ARG A 138 1 O VAL A 137 N VAL A 121 SHEET 1 B 8 LYS A 189 MSE A 196 0 SHEET 2 B 8 LYS A 161 SER A 167 1 N ILE A 164 O GLU A 192 SHEET 3 B 8 MSE A 217 PHE A 221 1 O PHE A 219 N ALA A 165 SHEET 4 B 8 LYS A 246 THR A 250 1 O MSE A 248 N ILE A 218 SHEET 5 B 8 LEU A 270 TYR A 273 1 O THR A 272 N SER A 249 SHEET 6 B 8 ILE A 356 VAL A 368 -1 O ARG A 363 N SER A 271 SHEET 7 B 8 GLY A 345 ILE A 349 -1 N SER A 348 O THR A 357 SHEET 8 B 8 LYS A 339 SER A 342 -1 N TRP A 340 O VAL A 347 SHEET 1 C 7 LYS A 189 MSE A 196 0 SHEET 2 C 7 LYS A 161 SER A 167 1 N ILE A 164 O GLU A 192 SHEET 3 C 7 MSE A 217 PHE A 221 1 O PHE A 219 N ALA A 165 SHEET 4 C 7 LYS A 246 THR A 250 1 O MSE A 248 N ILE A 218 SHEET 5 C 7 LEU A 270 TYR A 273 1 O THR A 272 N SER A 249 SHEET 6 C 7 ILE A 356 VAL A 368 -1 O ARG A 363 N SER A 271 SHEET 7 C 7 LYS A 371 GLN A 383 -1 O LEU A 377 N LEU A 362 LINK C THR A 33 N MSE A 34 1555 1555 1.34 LINK C MSE A 34 N SER A 35 1555 1555 1.33 LINK C ALYS A 46 N MSE A 47 1555 1555 1.34 LINK C BLYS A 46 N MSE A 47 1555 1555 1.35 LINK C MSE A 47 N GLY A 48 1555 1555 1.32 LINK C ALA A 105 N MSE A 106 1555 1555 1.33 LINK C MSE A 106 N ALA A 107 1555 1555 1.33 LINK C PRO A 118 N MSE A 119 1555 1555 1.34 LINK C MSE A 119 N VAL A 120 1555 1555 1.34 LINK C VAL A 121 N MSE A 122 1555 1555 1.34 LINK C MSE A 122 N ASN A 123 1555 1555 1.33 LINK C THR A 142 N MSE A 143 1555 1555 1.32 LINK C MSE A 143 N PHE A 144 1555 1555 1.34 LINK C ARG A 195 N MSE A 196 1555 1555 1.33 LINK C MSE A 196 N PRO A 197 1555 1555 1.33 LINK C AILE A 206 N MSE A 207 1555 1555 1.34 LINK C BILE A 206 N MSE A 207 1555 1555 1.34 LINK C MSE A 207 N GLN A 208 1555 1555 1.33 LINK C ASP A 216 N MSE A 217 1555 1555 1.34 LINK C MSE A 217 N ILE A 218 1555 1555 1.33 LINK C LEU A 247 N MSE A 248 1555 1555 1.34 LINK C MSE A 248 N SER A 249 1555 1555 1.31 LINK C THR A 302 N MSE A 303 1555 1555 1.33 LINK C MSE A 303 N THR A 304 1555 1555 1.34 LINK C LYS A 317 N AMSE A 318 1555 1555 1.33 LINK C LYS A 317 N BMSE A 318 1555 1555 1.33 LINK C AMSE A 318 N ILE A 319 1555 1555 1.34 LINK C BMSE A 318 N ILE A 319 1555 1555 1.34 LINK C GLY A 337 N AMSE A 338 1555 1555 1.33 LINK C GLY A 337 N BMSE A 338 1555 1555 1.33 LINK C AMSE A 338 N LYS A 339 1555 1555 1.33 LINK C BMSE A 338 N LYS A 339 1555 1555 1.32 LINK NA NA A 411 O HOH A 876 1555 1555 2.02 LINK NA NA A 411 O HOH A 767 1555 1555 2.29 LINK NA NA A 411 O HOH A 531 1555 1555 2.69 LINK O BGLU A 352 NA NA A 411 1555 1555 3.12 SITE 1 AC1 12 TYR A 100 PHE A 101 THR A 102 ASN A 123 SITE 2 AC1 12 ALA A 124 ALA A 125 TYR A 169 PRO A 171 SITE 3 AC1 12 PHE A 221 PRO A 223 ALA A 224 ASP A 252 SITE 1 AC2 7 ARG A 313 TYR A 316 GLU A 320 LEU A 377 SITE 2 AC2 7 GLU A 378 HOH A 638 HOH A 861 SITE 1 AC3 10 TRP A 52 HIS A 56 GLN A 156 GLU A 283 SITE 2 AC3 10 TYR A 309 ARG A 313 PHE A 380 GOL A 410 SITE 3 AC3 10 HOH A 667 HOH A 879 SITE 1 AC4 9 THR A 102 PRO A 103 GLU A 114 TYR A 169 SITE 2 AC4 9 GLY A 170 HOH A 628 HOH A 688 HOH A 842 SITE 3 AC4 9 HOH A 860 SITE 1 AC5 9 ALA A 61 GLY A 62 ASP A 280 ARG A 375 SITE 2 AC5 9 HOH A 536 HOH A 547 HOH A 624 HOH A 656 SITE 3 AC5 9 HOH A 697 SITE 1 AC6 7 PRO A 134 LYS A 336 ARG A 354 HOH A 514 SITE 2 AC6 7 HOH A 716 HOH A 751 HOH A 820 SITE 1 AC7 4 VAL A 68 ARG A 70 HOH A 542 HOH A 783 SITE 1 AC8 10 LYS A 59 GLU A 376 LEU A 377 GLU A 378 SITE 2 AC8 10 THR A 379 HOH A 536 HOH A 572 HOH A 624 SITE 3 AC8 10 HOH A 638 HOH A 670 SITE 1 AC9 10 LYS A 246 GLN A 292 LYS A 297 LEU A 298 SITE 2 AC9 10 ASP A 299 HOH A 557 HOH A 583 HOH A 585 SITE 3 AC9 10 HOH A 864 HOH A 865 SITE 1 BC1 7 LYS A 152 GLN A 156 GLU A 186 GLU A 283 SITE 2 BC1 7 SO4 A 403 HOH A 847 HOH A 879 SITE 1 BC2 4 GLU A 352 HOH A 531 HOH A 767 HOH A 876 CRYST1 42.135 61.174 130.177 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023733 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016347 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007682 0.00000