HEADER HYDROLASE/HYDROLASE INHIBITOR 08-MAY-12 4F2P TITLE CRYSTAL STRUCTURE OF 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE TITLE 2 NUCLEOSIDASE FROM SALMONELLA ENTERICA WITH DIETGLYCOL-THIO-DADME- TITLE 3 IMMUCILLIN-A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MTA/SAH NUCLEOSIDASE, MTAN, 5'-METHYLTHIOADENOSINE COMPND 5 NUCLEOSIDASE, S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE; COMPND 6 EC: 3.2.2.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR SOURCE 3 CHOLERAESUIS; SOURCE 4 ORGANISM_TAXID: 904139; SOURCE 5 STRAIN: SCSA50; SOURCE 6 GENE: EMBL EFZ04802.1, MTNN, PFS, SCA50_0219, SCH_0207; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS L-METHIONINE BIOSYNTHETIC PROCESS FROM S-ADENOSYLMETHIONINE, L- KEYWDS 2 METHIONINE SALVAGE FROM METHYLTHIOADENOSINE, 5'- KEYWDS 3 METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE, KEYWDS 4 ADENOSYLHOMOCYSTEINE NUCLEOSIDASE ACTIVITY, METHYLTHIOADENOSINE KEYWDS 5 NUCLEOSIDASE ACTIVITY, ACTING ON GLYCOSYL BONDS, HYDROLASE-HYDROLASE KEYWDS 6 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.M.HAAPALAINEN,K.THOMAS,J.B.BONANNO,S.C.ALMO,V.L.SCHRAMM REVDAT 3 28-FEB-24 4F2P 1 COMPND REMARK SEQADV HETNAM REVDAT 2 19-JUN-13 4F2P 1 JRNL REVDAT 1 01-MAY-13 4F2P 0 JRNL AUTH A.M.HAAPALAINEN,K.THOMAS,P.C.TYLER,G.B.EVANS,S.C.ALMO, JRNL AUTH 2 V.L.SCHRAMM JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE JRNL TITL 3 FROM SALMONELLA ENTERICA WITH JRNL TITL 4 DIETGLYCOL-THIO-DADME-IMMUCILLIN-A JRNL REF STRUCTURE V. 21 963 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23685211 JRNL DOI 10.1016/J.STR.2013.04.009 REMARK 2 REMARK 2 RESOLUTION. 1.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0025 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 52433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2811 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3729 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.43 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3481 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 76 REMARK 3 SOLVENT ATOMS : 338 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 2.52000 REMARK 3 B33 (A**2) : -2.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.091 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.090 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.055 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3726 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3685 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5069 ; 1.484 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8482 ; 1.315 ; 3.010 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 500 ; 5.934 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 148 ;35.931 ;25.203 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 618 ;11.730 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;20.654 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 611 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4230 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 794 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4F2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072379. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.075 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SAGITTAL FOCUSING MONOCHROMETER REMARK 200 AND VERTICAL FOCUSING MIRROR REMARK 200 OPTICS : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SAGITTAL FOCUSING MONOCHROMETER REMARK 200 AND VERTICAL FOCUSING MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55300 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.640 REMARK 200 RESOLUTION RANGE LOW (A) : 61.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.64 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.52800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27% PEG 3350, 0.2M SODIUM ACETATE, REMARK 280 0.1M HEPES, PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.20500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.25000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.07000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.25000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.20500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.07000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 232 REMARK 465 MET B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU B 174 O HOH B 527 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 149 40.37 -89.36 REMARK 500 ASN A 153 49.47 -142.59 REMARK 500 SER A 155 -147.88 55.59 REMARK 500 GLU A 174 -31.56 -137.28 REMARK 500 ASP B 149 42.73 -90.88 REMARK 500 ASN B 153 51.50 -145.00 REMARK 500 SER B 155 -144.05 49.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2EL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2EL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4F1W RELATED DB: PDB REMARK 900 RELATED ID: 4F2W RELATED DB: PDB DBREF 4F2P A 1 232 UNP E8NLP5 E8NLP5_SALET 1 232 DBREF 4F2P B 1 232 UNP E8NLP5 E8NLP5_SALET 1 232 SEQADV 4F2P MET A -15 UNP E8NLP5 INITIATING METHIONINE SEQADV 4F2P HIS A -14 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS A -13 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS A -12 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS A -11 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS A -10 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS A -9 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P GLY A -8 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P GLY A -7 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P LEU A -6 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P VAL A -5 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P PRO A -4 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P ARG A -3 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P GLY A -2 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P SER A -1 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS A 0 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P MET B -15 UNP E8NLP5 INITIATING METHIONINE SEQADV 4F2P HIS B -14 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS B -13 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS B -12 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS B -11 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS B -10 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS B -9 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P GLY B -8 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P GLY B -7 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P LEU B -6 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P VAL B -5 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P PRO B -4 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P ARG B -3 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P GLY B -2 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P SER B -1 UNP E8NLP5 EXPRESSION TAG SEQADV 4F2P HIS B 0 UNP E8NLP5 EXPRESSION TAG SEQRES 1 A 248 MET HIS HIS HIS HIS HIS HIS GLY GLY LEU VAL PRO ARG SEQRES 2 A 248 GLY SER HIS MET LYS ILE GLY ILE ILE GLY ALA MET GLU SEQRES 3 A 248 GLU GLU VAL THR LEU LEU ARG ASP LYS ILE ASP ASN ARG SEQRES 4 A 248 GLN THR ILE THR LEU GLY GLY CYS GLU ILE TYR THR GLY SEQRES 5 A 248 GLN LEU ASN GLY THR GLU VAL ALA LEU LEU LYS SER GLY SEQRES 6 A 248 ILE GLY LYS VAL ALA ALA ALA LEU GLY ALA THR LEU LEU SEQRES 7 A 248 LEU GLU HIS CYS LYS PRO ASP VAL ILE ILE ASN THR GLY SEQRES 8 A 248 SER ALA GLY GLY LEU ALA SER THR LEU LYS VAL GLY ASP SEQRES 9 A 248 ILE VAL VAL SER ASP GLU THR ARG TYR HIS ASP ALA ASP SEQRES 10 A 248 VAL THR ALA PHE GLY TYR GLU TYR GLY GLN LEU PRO GLY SEQRES 11 A 248 CYS PRO ALA GLY PHE LYS ALA ASP ASP LYS LEU ILE ALA SEQRES 12 A 248 ALA ALA GLU SER CYS ILE ARG GLU LEU ASN LEU ASN ALA SEQRES 13 A 248 VAL ARG GLY LEU ILE VAL SER GLY ASP ALA PHE ILE ASN SEQRES 14 A 248 GLY SER VAL GLY LEU ALA LYS ILE ARG HIS ASN PHE PRO SEQRES 15 A 248 ASP ALA VAL ALA VAL GLU MET GLU ALA THR ALA ILE ALA SEQRES 16 A 248 HIS VAL CYS HIS ASN PHE ASN VAL PRO PHE VAL VAL VAL SEQRES 17 A 248 ARG ALA ILE SER ASP VAL ALA ASP GLN GLN SER HIS LEU SEQRES 18 A 248 SER PHE ASP GLU PHE LEU ALA VAL ALA ALA LYS GLN SER SEQRES 19 A 248 THR LEU MET VAL GLU THR LEU VAL GLN LYS LEU ALA HIS SEQRES 20 A 248 GLY SEQRES 1 B 248 MET HIS HIS HIS HIS HIS HIS GLY GLY LEU VAL PRO ARG SEQRES 2 B 248 GLY SER HIS MET LYS ILE GLY ILE ILE GLY ALA MET GLU SEQRES 3 B 248 GLU GLU VAL THR LEU LEU ARG ASP LYS ILE ASP ASN ARG SEQRES 4 B 248 GLN THR ILE THR LEU GLY GLY CYS GLU ILE TYR THR GLY SEQRES 5 B 248 GLN LEU ASN GLY THR GLU VAL ALA LEU LEU LYS SER GLY SEQRES 6 B 248 ILE GLY LYS VAL ALA ALA ALA LEU GLY ALA THR LEU LEU SEQRES 7 B 248 LEU GLU HIS CYS LYS PRO ASP VAL ILE ILE ASN THR GLY SEQRES 8 B 248 SER ALA GLY GLY LEU ALA SER THR LEU LYS VAL GLY ASP SEQRES 9 B 248 ILE VAL VAL SER ASP GLU THR ARG TYR HIS ASP ALA ASP SEQRES 10 B 248 VAL THR ALA PHE GLY TYR GLU TYR GLY GLN LEU PRO GLY SEQRES 11 B 248 CYS PRO ALA GLY PHE LYS ALA ASP ASP LYS LEU ILE ALA SEQRES 12 B 248 ALA ALA GLU SER CYS ILE ARG GLU LEU ASN LEU ASN ALA SEQRES 13 B 248 VAL ARG GLY LEU ILE VAL SER GLY ASP ALA PHE ILE ASN SEQRES 14 B 248 GLY SER VAL GLY LEU ALA LYS ILE ARG HIS ASN PHE PRO SEQRES 15 B 248 ASP ALA VAL ALA VAL GLU MET GLU ALA THR ALA ILE ALA SEQRES 16 B 248 HIS VAL CYS HIS ASN PHE ASN VAL PRO PHE VAL VAL VAL SEQRES 17 B 248 ARG ALA ILE SER ASP VAL ALA ASP GLN GLN SER HIS LEU SEQRES 18 B 248 SER PHE ASP GLU PHE LEU ALA VAL ALA ALA LYS GLN SER SEQRES 19 B 248 THR LEU MET VAL GLU THR LEU VAL GLN LYS LEU ALA HIS SEQRES 20 B 248 GLY HET 2EL A 301 25 HET ACT A 302 4 HET GOL A 303 6 HET GOL A 304 6 HET 2EL B 301 50 HET EDO B 302 4 HET GOL B 303 6 HETNAM 2EL (3R,4S)-1-[(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL) HETNAM 2 2EL METHYL]-4-({[2-(2-HYDROXYETHOXY) HETNAM 3 2EL ETHYL]SULFANYL}METHYL)PYRROLIDIN-3- OL HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETSYN 2EL DIETGLYCOL-THIO-DADME-IMMUCILLIN-A HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 2EL 2(C16 H25 N5 O3 S) FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 EDO C2 H6 O2 FORMUL 10 HOH *338(H2 O) HELIX 1 1 MET A 9 LYS A 19 1 11 HELIX 2 2 GLY A 51 LYS A 67 1 17 HELIX 3 3 VAL A 102 GLY A 106 5 5 HELIX 4 4 ASP A 122 LEU A 136 1 15 HELIX 5 5 GLY A 154 PHE A 165 1 12 HELIX 6 6 GLU A 174 PHE A 185 1 12 HELIX 7 7 GLN A 202 HIS A 231 1 30 HELIX 8 8 MET B 9 ILE B 20 1 12 HELIX 9 9 GLY B 51 LYS B 67 1 17 HELIX 10 10 VAL B 102 GLY B 106 5 5 HELIX 11 11 ASP B 122 ASN B 137 1 16 HELIX 12 12 GLY B 154 PHE B 165 1 12 HELIX 13 13 GLU B 174 PHE B 185 1 12 HELIX 14 14 GLN B 202 HIS B 231 1 30 SHEET 1 A 9 ILE A 20 LEU A 28 0 SHEET 2 A 9 CYS A 31 LEU A 38 -1 O GLN A 37 N ASP A 21 SHEET 3 A 9 THR A 41 LYS A 47 -1 O LEU A 45 N TYR A 34 SHEET 4 A 9 LYS A 2 GLY A 7 1 N ILE A 5 O LEU A 46 SHEET 5 A 9 VAL A 70 GLY A 79 1 O THR A 74 N ILE A 6 SHEET 6 A 9 ALA A 168 GLU A 172 -1 O VAL A 171 N GLY A 78 SHEET 7 A 9 ALA A 140 SER A 147 1 N LEU A 144 O VAL A 169 SHEET 8 A 9 ILE A 89 TYR A 97 1 N GLU A 94 O ILE A 145 SHEET 9 A 9 PHE A 119 LYS A 120 -1 O PHE A 119 N THR A 95 SHEET 1 B 8 ILE A 20 LEU A 28 0 SHEET 2 B 8 CYS A 31 LEU A 38 -1 O GLN A 37 N ASP A 21 SHEET 3 B 8 THR A 41 LYS A 47 -1 O LEU A 45 N TYR A 34 SHEET 4 B 8 LYS A 2 GLY A 7 1 N ILE A 5 O LEU A 46 SHEET 5 B 8 VAL A 70 GLY A 79 1 O THR A 74 N ILE A 6 SHEET 6 B 8 PHE A 189 ASP A 197 1 O VAL A 190 N ASN A 73 SHEET 7 B 8 ILE A 89 TYR A 97 -1 N VAL A 90 O ARG A 193 SHEET 8 B 8 PHE A 119 LYS A 120 -1 O PHE A 119 N THR A 95 SHEET 1 C11 ASP B 21 LEU B 28 0 SHEET 2 C11 CYS B 31 LEU B 38 -1 O GLN B 37 N ASP B 21 SHEET 3 C11 THR B 41 LYS B 47 -1 O VAL B 43 N GLY B 36 SHEET 4 C11 LYS B 2 GLY B 7 1 N ILE B 5 O LEU B 46 SHEET 5 C11 VAL B 70 ASN B 73 1 O VAL B 70 N GLY B 4 SHEET 6 C11 PHE B 189 ASP B 197 1 O VAL B 192 N ASN B 73 SHEET 7 C11 SER B 76 GLY B 79 1 N GLY B 79 O ASP B 197 SHEET 8 C11 ALA B 168 GLU B 172 -1 O VAL B 171 N GLY B 78 SHEET 9 C11 ALA B 140 SER B 147 1 N LEU B 144 O VAL B 169 SHEET 10 C11 ILE B 89 TYR B 97 1 N GLU B 94 O ILE B 145 SHEET 11 C11 PHE B 119 LYS B 120 -1 O PHE B 119 N THR B 95 SHEET 1 D 8 ASP B 21 LEU B 28 0 SHEET 2 D 8 CYS B 31 LEU B 38 -1 O GLN B 37 N ASP B 21 SHEET 3 D 8 THR B 41 LYS B 47 -1 O VAL B 43 N GLY B 36 SHEET 4 D 8 LYS B 2 GLY B 7 1 N ILE B 5 O LEU B 46 SHEET 5 D 8 VAL B 70 ASN B 73 1 O VAL B 70 N GLY B 4 SHEET 6 D 8 PHE B 189 ASP B 197 1 O VAL B 192 N ASN B 73 SHEET 7 D 8 ILE B 89 TYR B 97 -1 N VAL B 90 O ARG B 193 SHEET 8 D 8 PHE B 119 LYS B 120 -1 O PHE B 119 N THR B 95 SITE 1 AC1 16 ILE A 50 SER A 76 ALA A 77 GLY A 78 SITE 2 AC1 16 ALA A 150 PHE A 151 ILE A 152 GLU A 172 SITE 3 AC1 16 MET A 173 GLU A 174 SER A 196 ASP A 197 SITE 4 AC1 16 PHE A 207 HOH A 412 HOH A 531 PHE B 105 SITE 1 AC2 6 GLY A 154 SER A 155 ASP A 200 GLN A 201 SITE 2 AC2 6 HOH A 432 HOH A 552 SITE 1 AC3 5 SER A 131 ARG A 134 ASP B 93 ARG B 142 SITE 2 AC3 5 HOH B 501 SITE 1 AC4 2 PHE A 105 GLY A 106 SITE 1 AC5 18 PHE A 105 TYR A 107 ILE B 50 SER B 76 SITE 2 AC5 18 ALA B 77 GLY B 78 ALA B 150 PHE B 151 SITE 3 AC5 18 ILE B 152 GLU B 172 MET B 173 GLU B 174 SITE 4 AC5 18 SER B 196 ASP B 197 PHE B 207 ASP B 208 SITE 5 AC5 18 HOH B 402 HOH B 522 SITE 1 AC6 5 SER B 206 PHE B 210 HOH B 417 HOH B 444 SITE 2 AC6 5 HOH B 534 SITE 1 AC7 6 GLY A 114 GLY B 30 HOH B 403 HOH B 414 SITE 2 AC7 6 HOH B 447 HOH B 504 CRYST1 52.410 70.140 122.500 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019080 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008163 0.00000