HEADER LYASE 11-MAY-12 4F4R TITLE CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE HOMOLOG FROM TITLE 2 CHROMOHALOBACTER SALEXIGENS (TARGET EFI-502114), WITH BOUND NA, TITLE 3 ORDERED LOOP COMPND MOL_ID: 1; COMPND 2 MOLECULE: D-MANNONATE DEHYDRATASE; COMPND 3 CHAIN: A; COMPND 4 EC: 4.2.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHROMOHALOBACTER SALEXIGENS; SOURCE 3 ORGANISM_TAXID: 290398; SOURCE 4 STRAIN: DSM 3043; SOURCE 5 GENE: CSAL_2974; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ENOLASE, ENZYME FUNCTION INITIATIVE, STRUCTURAL GENOMICS, LYASE, KEYWDS 2 MEDICAL STRUCTURAL GENOMICS OF PATHOGENIC PROTOZOA, MSGPP EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, AUTHOR 3 B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER,J.A.GERLT,S.C.ALMO,ENZYME AUTHOR 4 FUNCTION INITIATIVE (EFI),MEDICAL STRUCTURAL GENOMICS OF PATHOGENIC AUTHOR 5 PROTOZOA (MSGPP) REVDAT 2 13-SEP-23 4F4R 1 REMARK SEQADV LINK REVDAT 1 27-JUN-12 4F4R 0 JRNL AUTH M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO, JRNL AUTH 2 S.R.WASSERMAN,S.SOJITRA,E.WASHINGTON,A.SCOTT GLENN, JRNL AUTH 3 S.CHOWDHURY,B.EVANS,J.HAMMONDS,B.HILLERICH,J.LOVE, JRNL AUTH 4 R.D.SEIDEL,H.J.IMKER,J.A.GERLT,S.C.ALMO, JRNL AUTH 5 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF D-MANNONATE DEHYDRATASE HOMOLOG FROM JRNL TITL 2 CHROMOHALOBACTER SALEXIGENS (TARGET EFI-502114), WITH BOUND JRNL TITL 3 NA, ORDERED LOOP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 49792 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2523 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.8983 - 4.7121 0.99 2827 155 0.1556 0.1624 REMARK 3 2 4.7121 - 3.7422 1.00 2709 149 0.1148 0.1300 REMARK 3 3 3.7422 - 3.2697 1.00 2679 136 0.1228 0.1493 REMARK 3 4 3.2697 - 2.9711 1.00 2647 136 0.1467 0.1634 REMARK 3 5 2.9711 - 2.7582 1.00 2649 142 0.1468 0.1841 REMARK 3 6 2.7582 - 2.5957 1.00 2592 157 0.1528 0.1927 REMARK 3 7 2.5957 - 2.4658 1.00 2620 148 0.1427 0.1608 REMARK 3 8 2.4658 - 2.3585 1.00 2623 132 0.1485 0.1774 REMARK 3 9 2.3585 - 2.2677 1.00 2596 143 0.1421 0.2038 REMARK 3 10 2.2677 - 2.1895 1.00 2612 139 0.1405 0.1871 REMARK 3 11 2.1895 - 2.1210 1.00 2601 124 0.1418 0.1656 REMARK 3 12 2.1210 - 2.0604 1.00 2603 129 0.1497 0.1674 REMARK 3 13 2.0604 - 2.0062 1.00 2594 145 0.1498 0.2035 REMARK 3 14 2.0062 - 1.9573 1.00 2607 130 0.1582 0.1826 REMARK 3 15 1.9573 - 1.9128 1.00 2583 136 0.1664 0.2208 REMARK 3 16 1.9128 - 1.8721 1.00 2584 135 0.1801 0.2013 REMARK 3 17 1.8721 - 1.8346 1.00 2572 140 0.2049 0.2210 REMARK 3 18 1.8346 - 1.8000 1.00 2571 147 0.2295 0.2529 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 43.62 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.63550 REMARK 3 B22 (A**2) : -3.63550 REMARK 3 B33 (A**2) : 7.27100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3413 REMARK 3 ANGLE : 1.052 4660 REMARK 3 CHIRALITY : 0.074 496 REMARK 3 PLANARITY : 0.005 611 REMARK 3 DIHEDRAL : 13.071 1234 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ -2:41) REMARK 3 ORIGIN FOR THE GROUP (A): -74.9876 99.9187 40.6652 REMARK 3 T TENSOR REMARK 3 T11: 0.2151 T22: 0.1143 REMARK 3 T33: 0.3702 T12: 0.0469 REMARK 3 T13: -0.0748 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.8205 L22: 1.8533 REMARK 3 L33: 1.1614 L12: 0.4879 REMARK 3 L13: -0.1269 L23: 0.6071 REMARK 3 S TENSOR REMARK 3 S11: 0.0646 S12: -0.0345 S13: 0.2819 REMARK 3 S21: 0.0867 S22: -0.0043 S23: -0.0388 REMARK 3 S31: -0.2006 S32: -0.0130 S33: -0.1078 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 42:143) REMARK 3 ORIGIN FOR THE GROUP (A): -68.9428 89.9098 35.1940 REMARK 3 T TENSOR REMARK 3 T11: 0.1970 T22: 0.1197 REMARK 3 T33: 0.2202 T12: 0.0410 REMARK 3 T13: -0.0768 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.5425 L22: 0.5381 REMARK 3 L33: 0.3787 L12: 0.0123 REMARK 3 L13: 0.0827 L23: -0.0069 REMARK 3 S TENSOR REMARK 3 S11: 0.0062 S12: 0.0937 S13: 0.2220 REMARK 3 S21: -0.1379 S22: -0.0407 S23: 0.1595 REMARK 3 S31: -0.1149 S32: -0.0460 S33: 0.0839 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 144:204) REMARK 3 ORIGIN FOR THE GROUP (A): -76.3575 75.3697 13.4278 REMARK 3 T TENSOR REMARK 3 T11: 0.3328 T22: 0.2865 REMARK 3 T33: 0.1700 T12: 0.0513 REMARK 3 T13: -0.2062 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.2735 L22: 1.1963 REMARK 3 L33: 0.5530 L12: 0.4617 REMARK 3 L13: -0.1967 L23: 0.0775 REMARK 3 S TENSOR REMARK 3 S11: -0.0610 S12: 0.2476 S13: 0.1981 REMARK 3 S21: -0.2292 S22: -0.0178 S23: 0.3101 REMARK 3 S31: -0.1886 S32: -0.2029 S33: -0.0814 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 205:403) REMARK 3 ORIGIN FOR THE GROUP (A): -67.8091 80.5248 27.1439 REMARK 3 T TENSOR REMARK 3 T11: 0.1948 T22: 0.1612 REMARK 3 T33: 0.1675 T12: 0.0217 REMARK 3 T13: -0.0716 T23: 0.0343 REMARK 3 L TENSOR REMARK 3 L11: 0.4324 L22: 0.4502 REMARK 3 L33: 0.3447 L12: 0.0406 REMARK 3 L13: -0.0081 L23: 0.0412 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.1353 S13: 0.1882 REMARK 3 S21: -0.1553 S22: -0.0492 S23: 0.1296 REMARK 3 S31: -0.1005 S32: -0.0411 S33: 0.0441 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4F4R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072453. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49800 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.70 REMARK 200 R MERGE FOR SHELL (I) : 0.75200 REMARK 200 R SYM FOR SHELL (I) : 0.75200 REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3BSM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 150 MM REMARK 280 NACL, 10% GLYCEROL, 1 MM DTT, 5 MM MGCL), RESERVOIR (0.2 M REMARK 280 NAACETATE, 0.1 M TRIS-HCL PH 8.5, 30% PEG4000); CRYOPROTECTION REMARK 280 (RESERVOIR, + 20% GLYCEROL), SITTING DROP VAPOR DIFFUSION, REMARK 280 TEMPERATURE 298K, VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS AN OCTAMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 53860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 82610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -264.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -111.38900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 111.38900 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 111.38900 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 -111.38900 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -111.38900 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 84.57600 REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 111.38900 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 84.57600 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 -111.38900 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 111.38900 REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 84.57600 REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 84.57600 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 84.57600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 502 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 623 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 650 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 684 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 709 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 735 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 784 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 811 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 VAL A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 75 -51.22 73.47 REMARK 500 ARG A 78 -179.04 68.83 REMARK 500 PRO A 165 152.81 -48.60 REMARK 500 ASN A 335 47.14 -88.91 REMARK 500 PHE A 352 75.64 -118.63 REMARK 500 TRP A 401 -159.29 -114.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 501 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 211 OD2 REMARK 620 2 ASP A 211 OD1 52.3 REMARK 620 3 GLU A 237 OE1 89.4 99.5 REMARK 620 4 ASP A 238 OD2 151.1 100.1 105.5 REMARK 620 5 GLU A 263 OE1 122.0 173.0 75.6 86.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-502114 RELATED DB: TARGETTRACK DBREF 4F4R A 1 403 UNP Q1QT89 Q1QT89_CHRSD 1 403 SEQADV 4F4R MET A -22 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R HIS A -21 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R HIS A -20 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R HIS A -19 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R HIS A -18 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R HIS A -17 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R HIS A -16 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R SER A -15 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R SER A -14 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R GLY A -13 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R VAL A -12 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R ASP A -11 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R LEU A -10 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R GLY A -9 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R THR A -8 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R GLU A -7 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R ASN A -6 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R LEU A -5 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R TYR A -4 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R PHE A -3 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R GLN A -2 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R SER A -1 UNP Q1QT89 EXPRESSION TAG SEQADV 4F4R MET A 0 UNP Q1QT89 EXPRESSION TAG SEQRES 1 A 426 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 426 GLY THR GLU ASN LEU TYR PHE GLN SER MET MET LYS ILE SEQRES 3 A 426 ARG ASP ALA TYR THR ILE VAL THR CYS PRO GLY ARG ASN SEQRES 4 A 426 PHE VAL THR LEU LYS ILE VAL THR GLU SER GLY THR HIS SEQRES 5 A 426 GLY ILE GLY ASP ALA THR LEU ASN GLY ARG GLU MET ALA SEQRES 6 A 426 VAL ALA ALA TYR LEU ASP GLU HIS VAL VAL PRO ALA LEU SEQRES 7 A 426 ILE GLY ARG ASP ALA GLY ARG ILE GLU ASP THR TRP GLN SEQRES 8 A 426 TYR LEU TYR ARG GLY ALA TYR TRP ARG ARG GLY PRO VAL SEQRES 9 A 426 THR MET THR ALA ILE ALA ALA VAL ASP MET ALA LEU TRP SEQRES 10 A 426 ASP ILE LYS ALA LYS ALA ALA GLY MET PRO LEU TYR GLN SEQRES 11 A 426 LEU LEU GLY GLY LYS SER ARG GLU ARG VAL MET THR TYR SEQRES 12 A 426 ALA HIS CYS THR GLY GLN THR ILE GLU ASP CYS LEU GLY SEQRES 13 A 426 GLU VAL ALA ARG HIS VAL GLU LEU GLY TYR ARG ALA VAL SEQRES 14 A 426 ARG VAL GLN SER GLY VAL PRO GLY ILE GLU THR THR TYR SEQRES 15 A 426 GLY VAL ALA LYS THR PRO GLY GLU ARG TYR GLU PRO ALA SEQRES 16 A 426 ASP SER SER LEU PRO ALA GLU HIS VAL TRP SER THR GLU SEQRES 17 A 426 LYS TYR LEU ASN HIS ALA PRO LYS LEU PHE ALA ALA VAL SEQRES 18 A 426 ARG GLU ARG PHE GLY ASP ASP LEU HIS VAL LEU HIS ASP SEQRES 19 A 426 VAL HIS HIS ARG LEU THR PRO ILE GLU ALA ALA ARG LEU SEQRES 20 A 426 GLY LYS ALA VAL GLU PRO TYR HIS LEU PHE TRP LEU GLU SEQRES 21 A 426 ASP CYS VAL PRO ALA GLU ASN GLN GLU SER LEU ARG LEU SEQRES 22 A 426 ILE ARG GLU HIS THR THR THR PRO LEU ALA ILE GLY GLU SEQRES 23 A 426 VAL PHE ASN SER ILE HIS ASP CYS ARG GLU LEU ILE GLN SEQRES 24 A 426 ASN GLN TRP ILE ASP TYR ILE ARG MET PRO LEU THR HIS SEQRES 25 A 426 GLY GLY GLY ILE THR ALA MET ARG ARG VAL ALA ASP LEU SEQRES 26 A 426 ALA SER LEU TYR HIS VAL ARG THR GLY PHE HIS GLY PRO SEQRES 27 A 426 THR ASP LEU SER PRO VAL CYS LEU GLY ALA ALA ILE HIS SEQRES 28 A 426 PHE ASP THR TRP VAL PRO ASN PHE GLY ILE GLN GLU HIS SEQRES 29 A 426 MET PRO HIS THR ASP GLU THR ASP ALA VAL PHE PRO HIS SEQRES 30 A 426 ASP TYR ARG PHE GLU ASP GLY HIS PHE LEU ALA GLY GLU SEQRES 31 A 426 SER PRO GLY HIS GLY VAL ASP ILE ASP GLU GLU LEU ALA SEQRES 32 A 426 ALA LYS TYR PRO TYR GLU ARG ALA SER LEU PRO VAL ASN SEQRES 33 A 426 ARG LEU GLU ASP GLY THR LEU TRP HIS TRP HET NA A 501 1 HET CL A 502 1 HET GOL A 503 6 HET GOL A 504 6 HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NA NA 1+ FORMUL 3 CL CL 1- FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *343(H2 O) HELIX 1 1 TYR A -4 LYS A 2 1 7 HELIX 2 2 ARG A 39 VAL A 51 1 13 HELIX 3 3 VAL A 51 ILE A 56 1 6 HELIX 4 4 ARG A 62 ALA A 74 1 13 HELIX 5 5 GLY A 79 GLY A 102 1 24 HELIX 6 6 PRO A 104 GLY A 110 1 7 HELIX 7 7 THR A 127 LEU A 141 1 15 HELIX 8 8 SER A 183 GLY A 203 1 21 HELIX 9 9 THR A 217 GLU A 229 1 13 HELIX 10 10 PRO A 230 HIS A 232 5 3 HELIX 11 11 ASN A 244 SER A 247 5 4 HELIX 12 12 LEU A 248 THR A 255 1 8 HELIX 13 13 SER A 267 ASP A 270 5 4 HELIX 14 14 CYS A 271 ASN A 277 1 7 HELIX 15 15 GLY A 291 LEU A 305 1 15 HELIX 16 16 SER A 319 VAL A 333 1 15 HELIX 17 17 THR A 345 PHE A 352 1 8 HELIX 18 18 ASP A 376 ALA A 381 1 6 SHEET 1 A 3 ILE A 3 THR A 11 0 SHEET 2 A 3 PHE A 17 THR A 24 -1 O VAL A 23 N ASP A 5 SHEET 3 A 3 HIS A 29 ASP A 33 -1 O GLY A 30 N ILE A 22 SHEET 1 B 8 ARG A 309 THR A 310 0 SHEET 2 B 8 TYR A 282 ILE A 283 1 N ILE A 283 O ARG A 309 SHEET 3 B 8 LEU A 259 ILE A 261 1 N ILE A 261 O TYR A 282 SHEET 4 B 8 TRP A 235 GLU A 237 1 N LEU A 236 O ALA A 260 SHEET 5 B 8 HIS A 207 ASP A 211 1 N HIS A 210 O GLU A 237 SHEET 6 B 8 ALA A 145 SER A 150 1 N VAL A 146 O LEU A 209 SHEET 7 B 8 VAL A 117 GLY A 125 1 N CYS A 123 O ARG A 147 SHEET 8 B 8 GLN A 339 HIS A 341 1 O HIS A 341 N TYR A 120 SHEET 1 C 9 ARG A 309 THR A 310 0 SHEET 2 C 9 TYR A 282 ILE A 283 1 N ILE A 283 O ARG A 309 SHEET 3 C 9 LEU A 259 ILE A 261 1 N ILE A 261 O TYR A 282 SHEET 4 C 9 TRP A 235 GLU A 237 1 N LEU A 236 O ALA A 260 SHEET 5 C 9 HIS A 207 ASP A 211 1 N HIS A 210 O GLU A 237 SHEET 6 C 9 ALA A 145 SER A 150 1 N VAL A 146 O LEU A 209 SHEET 7 C 9 VAL A 117 GLY A 125 1 N CYS A 123 O ARG A 147 SHEET 8 C 9 HIS A 362 LEU A 364 -1 O PHE A 363 N VAL A 117 SHEET 9 C 9 ARG A 357 GLU A 359 -1 N GLU A 359 O HIS A 362 SHEET 1 D 2 GLU A 179 TRP A 182 0 SHEET 2 D 2 VAL A 392 LEU A 395 1 O VAL A 392 N HIS A 180 LINK OD2 ASP A 211 NA NA A 501 1555 1555 2.34 LINK OD1 ASP A 211 NA NA A 501 1555 1555 2.63 LINK OE1 GLU A 237 NA NA A 501 1555 1555 2.33 LINK OD2 ASP A 238 NA NA A 501 1555 1555 2.50 LINK OE1 GLU A 263 NA NA A 501 1555 1555 2.46 SITE 1 AC1 4 ASP A 211 GLU A 237 ASP A 238 GLU A 263 SITE 1 AC2 2 PRO A 80 VAL A 81 SITE 1 AC3 8 ASN A 37 TRP A 76 PRO A 171 HIS A 313 SITE 2 AC3 8 PRO A 315 ASP A 317 HOH A 710 HOH A 941 SITE 1 AC4 4 ASP A 349 HIS A 354 TYR A 356 HOH A 760 CRYST1 111.389 111.389 84.576 90.00 90.00 90.00 P 4 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008978 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008978 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011824 0.00000