data_4F5Q # _entry.id 4F5Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4F5Q pdb_00004f5q 10.2210/pdb4f5q/pdb NDB NA1770 ? ? RCSB RCSB072488 ? ? WWPDB D_1000072488 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4F5R . unspecified PDB 4F5P . unspecified PDB 4F5O . unspecified PDB 4F5N . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4F5Q _pdbx_database_status.recvd_initial_deposition_date 2012-05-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Freudenthal, B.D.' 1 'Beard, W.A.' 2 'Wilson, S.H.' 3 # _citation.id primary _citation.title 'Structures of dNTP Intermediate States during DNA Polymerase Active Site Assembly.' _citation.journal_abbrev Structure _citation.journal_volume 20 _citation.page_first 1829 _citation.page_last 1837 _citation.year 2012 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22959623 _citation.pdbx_database_id_DOI 10.1016/j.str.2012.08.008 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Freudenthal, B.D.' 1 ? primary 'Beard, W.A.' 2 ? primary 'Wilson, S.H.' 3 ? # _cell.entry_id 4F5Q _cell.length_a 55.139 _cell.length_b 77.629 _cell.length_c 54.953 _cell.angle_alpha 90.00 _cell.angle_beta 114.20 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4F5Q _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 38213.656 1 '2.7.7.7, 4.2.99.-' R283K ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') ; 3061.004 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') ; 4869.157 1 ? ? ? ? 5 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 6 non-polymer syn "2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine" 501.165 1 ? ? ? ? 7 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 8 water nat water 18.015 107 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMKAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMKAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)' GCTGATGCGC P ? 4 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACGGCGCATCAGC T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 LYS n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DG n 3 2 DC n 3 3 DT n 3 4 DG n 3 5 DA n 3 6 DT n 3 7 DG n 3 8 DC n 3 9 DG n 3 10 DC n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 DG n 4 7 DG n 4 8 DC n 4 9 DG n 4 10 DC n 4 11 DA n 4 12 DT n 4 13 DC n 4 14 DA n 4 15 DG n 4 16 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Tap56 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pWL11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? 'synthetic construct' ? 32630 'polydeoxyribonucleotide from IDT' 3 1 sample ? ? 'synthetic construct' ? 32630 'polydeoxyribonucleotide from IDT' 4 1 sample ? ? 'synthetic construct' ? 32630 'polydeoxyribonucleotide from IDT' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOLB_HUMAN P06746 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 ? 2 PDB 4F5Q 4F5Q 4 ? ? ? 3 PDB 4F5Q 4F5Q 3 ? ? ? 4 PDB 4F5Q 4F5Q 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4F5Q A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 4F5Q T 1 ? 16 ? 4F5Q 1 ? 16 ? 1 16 3 3 4F5Q P 1 ? 10 ? 4F5Q 1 ? 10 ? 1 10 4 4 4F5Q D 1 ? 5 ? 4F5Q 1 ? 5 ? 1 5 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4F5Q _struct_ref_seq_dif.mon_id LYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 283 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P06746 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 283 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 283 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6CF non-polymer . "2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine" ? 'C10 H16 F2 N3 O12 P3' 501.165 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4F5Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_percent_sol 45.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '50mM Imidazole, 350mM Sodium Acetate, 18% PEG3350, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN 92' _diffrn_detector.pdbx_collection_date 2011-09-02 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'mirrors VarimaxHF' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54178 # _reflns.entry_id 4F5Q _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 28 _reflns.d_resolution_high 2.25 _reflns.number_obs 112322 _reflns.number_all 112322 _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 36.11 _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.25 2.33 99.0 0.599 ? 2.38 3.6 ? ? ? ? ? ? 1 1 2.33 2.42 99.7 0.323 ? 3.83 3.7 ? ? ? ? ? ? 2 1 2.42 2.53 100 0.320 ? 4.45 4.4 ? ? ? ? ? ? 3 1 2.53 2.67 100 0.291 ? 6.25 6.5 ? ? ? ? ? ? 4 1 2.67 2.83 100 .209 ? 9.02 6.5 ? ? ? ? ? ? 5 1 2.83 3.05 100 0.154 ? 11.60 6.5 ? ? ? ? ? ? 6 1 # _refine.entry_id 4F5Q _refine.ls_number_reflns_obs 17616 _refine.ls_number_reflns_all 17616 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 21.105 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 86.93 _refine.ls_R_factor_obs 0.2206 _refine.ls_R_factor_all 0.2206 _refine.ls_R_factor_R_work 0.2140 _refine.ls_R_factor_R_free 0.2818 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.76 _refine.ls_number_reflns_R_free 1719 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.0000 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.413 _refine.solvent_model_param_bsol 46.565 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 2FMS _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.40 _refine.pdbx_overall_phase_error 32.43 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2548 _refine_hist.pdbx_number_atoms_nucleic_acid 635 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 3324 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 21.105 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.008 ? ? 3385 ? 'X-RAY DIFFRACTION' f_angle_d 0.981 ? ? 4704 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 19.863 ? ? 1319 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.055 ? ? 513 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 491 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.2456 2.3115 969 0.3698 64.00 0.4379 . . 117 . . . . 'X-RAY DIFFRACTION' . 2.3115 2.3861 1267 0.2962 84.00 0.3954 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.3861 2.4712 1226 0.2990 82.00 0.4426 . . 116 . . . . 'X-RAY DIFFRACTION' . 2.4712 2.5700 1274 0.2936 82.00 0.3798 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.5700 2.6867 1272 0.2434 85.00 0.3189 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.6867 2.8281 1284 0.2508 85.00 0.3343 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.8281 3.0048 1362 0.2318 90.00 0.3222 . . 156 . . . . 'X-RAY DIFFRACTION' . 3.0048 3.2360 1448 0.2162 94.00 0.2923 . . 155 . . . . 'X-RAY DIFFRACTION' . 3.2360 3.5603 1474 0.2064 97.00 0.2566 . . 158 . . . . 'X-RAY DIFFRACTION' . 3.5603 4.0723 1390 0.1645 90.00 0.2570 . . 133 . . . . 'X-RAY DIFFRACTION' . 4.0723 5.1185 1373 0.1558 89.00 0.1908 . . 145 . . . . 'X-RAY DIFFRACTION' . 5.1185 21.1055 1558 0.2230 100.00 0.2689 . . 172 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4F5Q _struct.title 'Closed ternary complex of R283K DNA polymerase beta' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4F5Q _struct_keywords.pdbx_keywords 'Transferase, lyase/DNA' _struct_keywords.text 'Transferase, lyase/DNA, lyase-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 8 ? M N N 8 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is a monomer in each asymetric unit.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? VAL A 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA A 32 ? LYS A 48 ? ALA A 32 LYS A 48 1 ? 17 HELX_P HELX_P3 3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 6 ASP A 91 ? THR A 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR A 121 ? ASN A 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU A 129 ? LEU A 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR A 142 ? LYS A 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 ARG A 152 ? LYS A 168 ? ARG A 152 LYS A 168 1 ? 17 HELX_P HELX_P13 13 GLY A 179 ? ARG A 182 ? GLY A 179 ARG A 182 5 ? 4 HELX_P HELX_P14 14 LEU A 210 ? VAL A 221 ? LEU A 210 VAL A 221 1 ? 12 HELX_P HELX_P15 15 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER A 275 ? GLU A 288 ? SER A 275 GLU A 288 1 ? 14 HELX_P HELX_P18 18 SER A 315 ? GLN A 324 ? SER A 315 GLN A 324 1 ? 10 HELX_P HELX_P19 19 GLU A 329 ? ARG A 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A LYS 60 O ? ? ? 1_555 H NA . NA ? ? A LYS 60 A NA 404 1_555 ? ? ? ? ? ? ? 2.519 ? ? metalc2 metalc ? ? A LEU 62 O ? ? ? 1_555 H NA . NA ? ? A LEU 62 A NA 404 1_555 ? ? ? ? ? ? ? 2.451 ? ? metalc3 metalc ? ? A VAL 65 O ? ? ? 1_555 H NA . NA ? ? A VAL 65 A NA 404 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc4 metalc ? ? A THR 101 O ? ? ? 1_555 I NA . NA ? ? A THR 101 A NA 405 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc5 metalc ? ? A VAL 103 O ? ? ? 1_555 I NA . NA ? ? A VAL 103 A NA 405 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc6 metalc ? ? A ILE 106 O ? ? ? 1_555 I NA . NA ? ? A ILE 106 A NA 405 1_555 ? ? ? ? ? ? ? 2.793 ? ? metalc7 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 E MN . MN ? ? A ASP 190 A MN 401 1_555 ? ? ? ? ? ? ? 2.086 ? ? metalc8 metalc ? ? A ASP 190 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 190 A MN 402 1_555 ? ? ? ? ? ? ? 2.034 ? ? metalc9 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 E MN . MN ? ? A ASP 192 A MN 401 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc10 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F MN . MN ? ? A ASP 192 A MN 402 1_555 ? ? ? ? ? ? ? 2.100 ? ? metalc11 metalc ? ? A ASP 256 OD2 ? ? ? 1_555 F MN . MN ? ? A ASP 256 A MN 402 1_555 ? ? ? ? ? ? ? 2.193 ? ? metalc12 metalc ? ? E MN . MN ? ? ? 1_555 G 6CF . O3G ? ? A MN 401 A 6CF 403 1_555 ? ? ? ? ? ? ? 2.012 ? ? metalc13 metalc ? ? E MN . MN ? ? ? 1_555 G 6CF . O2B ? ? A MN 401 A 6CF 403 1_555 ? ? ? ? ? ? ? 2.047 ? ? metalc14 metalc ? ? E MN . MN ? ? ? 1_555 G 6CF . O1A ? ? A MN 401 A 6CF 403 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc15 metalc ? ? E MN . MN ? ? ? 1_555 J HOH . O ? ? A MN 401 A HOH 505 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc16 metalc ? ? F MN . MN ? ? ? 1_555 G 6CF . O1A ? ? A MN 402 A 6CF 403 1_555 ? ? ? ? ? ? ? 2.195 ? ? metalc17 metalc ? ? F MN . MN ? ? ? 1_555 J HOH . O ? ? A MN 402 A HOH 572 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc18 metalc ? ? F MN . MN ? ? ? 1_555 C DC 10 "O3'" ? ? A MN 402 P DC 10 1_555 ? ? ? ? ? ? ? 2.142 ? ? metalc19 metalc ? ? H NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 404 A HOH 573 1_555 ? ? ? ? ? ? ? 2.384 ? ? metalc20 metalc ? ? H NA . NA ? ? ? 1_555 B DC 3 OP1 ? ? A NA 404 D DC 3 1_555 ? ? ? ? ? ? ? 2.745 ? ? metalc21 metalc ? ? I NA . NA ? ? ? 1_555 J HOH . O ? ? A NA 405 A HOH 536 1_555 ? ? ? ? ? ? ? 2.115 ? ? metalc22 metalc ? ? I NA . NA ? ? ? 1_555 C DG 9 OP1 ? ? A NA 405 P DG 9 1_555 ? ? ? ? ? ? ? 2.637 ? ? metalc23 metalc ? ? I NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 405 P HOH 106 1_555 ? ? ? ? ? ? ? 2.928 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 16 N4 ? ? P DG 1 T DC 16 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog16 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 15 N1 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 15 O6 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 15 N2 ? ? P DC 2 T DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 14 N1 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 14 N6 ? ? P DT 3 T DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 13 N3 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 13 O2 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 13 N4 ? ? P DG 4 T DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 12 N3 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 12 O4 ? ? P DA 5 T DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 11 N1 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 11 N6 ? ? P DT 6 T DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 10 N3 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 10 O2 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 10 N4 ? ? P DG 7 T DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 9 N1 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 9 O6 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 9 N2 ? ? P DC 8 T DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 8 N3 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 9 N2 ? ? ? 1_555 D DC 8 O2 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DG 9 O6 ? ? ? 1_555 D DC 8 N4 ? ? P DG 9 T DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 7 N1 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 7 O6 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 7 N2 ? ? P DC 10 T DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 A 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 B 1 ILE A 174 ? CYS A 178 ? ILE A 174 CYS A 178 B 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 B 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 B 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 B 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 C 1 PHE A 291 ? ILE A 293 ? PHE A 291 ILE A 293 C 2 ILE A 298 ? PRO A 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 B 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 B 2 3 N VAL A 193 ? N VAL A 193 O ASP A 256 ? O ASP A 256 B 3 4 O ILE A 255 ? O ILE A 255 N GLY A 237 ? N GLY A 237 B 4 5 O MET A 236 ? O MET A 236 N LEU A 228 ? N LEU A 228 C 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 401 ? 5 'BINDING SITE FOR RESIDUE MN A 401' AC2 Software A MN 402 ? 7 'BINDING SITE FOR RESIDUE MN A 402' AC3 Software A 6CF 403 ? 19 'BINDING SITE FOR RESIDUE 6CF A 403' AC4 Software A NA 404 ? 5 'BINDING SITE FOR RESIDUE NA A 404' AC5 Software A NA 405 ? 6 'BINDING SITE FOR RESIDUE NA A 405' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 190 ? ASP A 190 . ? 1_555 ? 2 AC1 5 ASP A 192 ? ASP A 192 . ? 1_555 ? 3 AC1 5 MN F . ? MN A 402 . ? 1_555 ? 4 AC1 5 6CF G . ? 6CF A 403 . ? 1_555 ? 5 AC1 5 HOH J . ? HOH A 505 . ? 1_555 ? 6 AC2 7 ASP A 190 ? ASP A 190 . ? 1_555 ? 7 AC2 7 ASP A 192 ? ASP A 192 . ? 1_555 ? 8 AC2 7 ASP A 256 ? ASP A 256 . ? 1_555 ? 9 AC2 7 MN E . ? MN A 401 . ? 1_555 ? 10 AC2 7 6CF G . ? 6CF A 403 . ? 1_555 ? 11 AC2 7 HOH J . ? HOH A 572 . ? 1_555 ? 12 AC2 7 DC C 10 ? DC P 10 . ? 1_555 ? 13 AC3 19 GLY A 179 ? GLY A 179 . ? 1_555 ? 14 AC3 19 SER A 180 ? SER A 180 . ? 1_555 ? 15 AC3 19 ARG A 183 ? ARG A 183 . ? 1_555 ? 16 AC3 19 SER A 188 ? SER A 188 . ? 1_555 ? 17 AC3 19 GLY A 189 ? GLY A 189 . ? 1_555 ? 18 AC3 19 ASP A 190 ? ASP A 190 . ? 1_555 ? 19 AC3 19 ASP A 192 ? ASP A 192 . ? 1_555 ? 20 AC3 19 TYR A 271 ? TYR A 271 . ? 1_555 ? 21 AC3 19 PHE A 272 ? PHE A 272 . ? 1_555 ? 22 AC3 19 THR A 273 ? THR A 273 . ? 1_555 ? 23 AC3 19 GLY A 274 ? GLY A 274 . ? 1_555 ? 24 AC3 19 ASP A 276 ? ASP A 276 . ? 1_555 ? 25 AC3 19 ASN A 279 ? ASN A 279 . ? 1_555 ? 26 AC3 19 MN E . ? MN A 401 . ? 1_555 ? 27 AC3 19 MN F . ? MN A 402 . ? 1_555 ? 28 AC3 19 HOH J . ? HOH A 505 . ? 1_555 ? 29 AC3 19 HOH J . ? HOH A 572 . ? 1_555 ? 30 AC3 19 DC C 10 ? DC P 10 . ? 1_555 ? 31 AC3 19 DG D 6 ? DG T 6 . ? 1_555 ? 32 AC4 5 LYS A 60 ? LYS A 60 . ? 1_555 ? 33 AC4 5 LEU A 62 ? LEU A 62 . ? 1_555 ? 34 AC4 5 VAL A 65 ? VAL A 65 . ? 1_555 ? 35 AC4 5 HOH J . ? HOH A 573 . ? 1_555 ? 36 AC4 5 DC B 3 ? DC D 3 . ? 1_555 ? 37 AC5 6 THR A 101 ? THR A 101 . ? 1_555 ? 38 AC5 6 VAL A 103 ? VAL A 103 . ? 1_555 ? 39 AC5 6 ILE A 106 ? ILE A 106 . ? 1_555 ? 40 AC5 6 HOH J . ? HOH A 536 . ? 1_555 ? 41 AC5 6 DG C 9 ? DG P 9 . ? 1_555 ? 42 AC5 6 HOH L . ? HOH P 106 . ? 1_555 ? # _database_PDB_matrix.entry_id 4F5Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4F5Q _atom_sites.fract_transf_matrix[1][1] 0.018136 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008151 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012882 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019951 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F MN N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 ? ? ? A . n A 1 206 LYS 206 206 ? ? ? A . n A 1 207 GLN 207 207 ? ? ? A . n A 1 208 PRO 208 208 ? ? ? A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ASN 245 245 ? ? ? A . n A 1 246 ASP 246 246 ? ? ? A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DG 1 1 1 DG DG P . n C 3 2 DC 2 2 2 DC DC P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DT 6 6 6 DT DT P . n C 3 7 DG 7 7 7 DG DG P . n C 3 8 DC 8 8 8 DC DC P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 DG 6 6 6 DG DG T . n D 4 7 DG 7 7 7 DG DG T . n D 4 8 DC 8 8 8 DC DC T . n D 4 9 DG 9 9 9 DG DG T . n D 4 10 DC 10 10 10 DC DC T . n D 4 11 DA 11 11 11 DA DA T . n D 4 12 DT 12 12 12 DT DT T . n D 4 13 DC 13 13 13 DC DC T . n D 4 14 DA 14 14 14 DA DA T . n D 4 15 DG 15 15 15 DG DG T . n D 4 16 DC 16 16 16 DC DC T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MN 1 401 1 MN MN A . F 5 MN 1 402 2 MN MN A . G 6 6CF 1 403 338 6CF 6CF A . H 7 NA 1 404 1 NA NA A . I 7 NA 1 405 2 NA NA A . J 8 HOH 1 501 2 HOH HOH A . J 8 HOH 2 502 3 HOH HOH A . J 8 HOH 3 503 6 HOH HOH A . J 8 HOH 4 504 7 HOH HOH A . J 8 HOH 5 505 8 HOH HOH A . J 8 HOH 6 506 10 HOH HOH A . J 8 HOH 7 507 11 HOH HOH A . J 8 HOH 8 508 14 HOH HOH A . J 8 HOH 9 509 15 HOH HOH A . J 8 HOH 10 510 16 HOH HOH A . J 8 HOH 11 511 17 HOH HOH A . J 8 HOH 12 512 19 HOH HOH A . J 8 HOH 13 513 20 HOH HOH A . J 8 HOH 14 514 21 HOH HOH A . J 8 HOH 15 515 22 HOH HOH A . J 8 HOH 16 516 23 HOH HOH A . J 8 HOH 17 517 24 HOH HOH A . J 8 HOH 18 518 25 HOH HOH A . J 8 HOH 19 519 26 HOH HOH A . J 8 HOH 20 520 28 HOH HOH A . J 8 HOH 21 521 29 HOH HOH A . J 8 HOH 22 522 30 HOH HOH A . J 8 HOH 23 523 31 HOH HOH A . J 8 HOH 24 524 32 HOH HOH A . J 8 HOH 25 525 33 HOH HOH A . J 8 HOH 26 526 34 HOH HOH A . J 8 HOH 27 527 35 HOH HOH A . J 8 HOH 28 528 36 HOH HOH A . J 8 HOH 29 529 37 HOH HOH A . J 8 HOH 30 530 38 HOH HOH A . J 8 HOH 31 531 39 HOH HOH A . J 8 HOH 32 532 40 HOH HOH A . J 8 HOH 33 533 41 HOH HOH A . J 8 HOH 34 534 45 HOH HOH A . J 8 HOH 35 535 46 HOH HOH A . J 8 HOH 36 536 50 HOH HOH A . J 8 HOH 37 537 52 HOH HOH A . J 8 HOH 38 538 54 HOH HOH A . J 8 HOH 39 539 57 HOH HOH A . J 8 HOH 40 540 61 HOH HOH A . J 8 HOH 41 541 63 HOH HOH A . J 8 HOH 42 542 66 HOH HOH A . J 8 HOH 43 543 67 HOH HOH A . J 8 HOH 44 544 68 HOH HOH A . J 8 HOH 45 545 69 HOH HOH A . J 8 HOH 46 546 72 HOH HOH A . J 8 HOH 47 547 74 HOH HOH A . J 8 HOH 48 548 75 HOH HOH A . J 8 HOH 49 549 76 HOH HOH A . J 8 HOH 50 550 78 HOH HOH A . J 8 HOH 51 551 80 HOH HOH A . J 8 HOH 52 552 81 HOH HOH A . J 8 HOH 53 553 82 HOH HOH A . J 8 HOH 54 554 84 HOH HOH A . J 8 HOH 55 555 85 HOH HOH A . J 8 HOH 56 556 87 HOH HOH A . J 8 HOH 57 557 88 HOH HOH A . J 8 HOH 58 558 90 HOH HOH A . J 8 HOH 59 559 94 HOH HOH A . J 8 HOH 60 560 95 HOH HOH A . J 8 HOH 61 561 96 HOH HOH A . J 8 HOH 62 562 101 HOH HOH A . J 8 HOH 63 563 102 HOH HOH A . J 8 HOH 64 564 103 HOH HOH A . J 8 HOH 65 565 104 HOH HOH A . J 8 HOH 66 566 105 HOH HOH A . J 8 HOH 67 567 107 HOH HOH A . J 8 HOH 68 568 109 HOH HOH A . J 8 HOH 69 569 111 HOH HOH A . J 8 HOH 70 570 112 HOH HOH A . J 8 HOH 71 571 125 HOH HOH A . J 8 HOH 72 572 128 HOH HOH A . J 8 HOH 73 573 93 HOH HOH A . K 8 HOH 1 101 59 HOH HOH D . K 8 HOH 2 102 86 HOH HOH D . K 8 HOH 3 103 98 HOH HOH D . L 8 HOH 1 101 1 HOH HOH P . L 8 HOH 2 102 27 HOH HOH P . L 8 HOH 3 103 42 HOH HOH P . L 8 HOH 4 104 51 HOH HOH P . L 8 HOH 5 105 55 HOH HOH P . L 8 HOH 6 106 58 HOH HOH P . L 8 HOH 7 107 71 HOH HOH P . L 8 HOH 8 108 77 HOH HOH P . L 8 HOH 9 109 79 HOH HOH P . L 8 HOH 10 110 114 HOH HOH P . L 8 HOH 11 111 119 HOH HOH P . L 8 HOH 12 112 121 HOH HOH P . M 8 HOH 1 101 4 HOH HOH T . M 8 HOH 2 102 9 HOH HOH T . M 8 HOH 3 103 12 HOH HOH T . M 8 HOH 4 104 13 HOH HOH T . M 8 HOH 5 105 18 HOH HOH T . M 8 HOH 6 106 43 HOH HOH T . M 8 HOH 7 107 47 HOH HOH T . M 8 HOH 8 108 48 HOH HOH T . M 8 HOH 9 109 53 HOH HOH T . M 8 HOH 10 110 56 HOH HOH T . M 8 HOH 11 111 60 HOH HOH T . M 8 HOH 12 112 62 HOH HOH T . M 8 HOH 13 113 64 HOH HOH T . M 8 HOH 14 114 65 HOH HOH T . M 8 HOH 15 115 73 HOH HOH T . M 8 HOH 16 116 116 HOH HOH T . M 8 HOH 17 117 120 HOH HOH T . M 8 HOH 18 118 124 HOH HOH T . M 8 HOH 19 119 126 HOH HOH T . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5150 ? 1 MORE -66 ? 1 'SSA (A^2)' 19420 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A LEU 62 ? A LEU 62 ? 1_555 98.9 ? 2 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 96.1 ? 3 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 95.0 ? 4 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? J HOH . ? A HOH 573 ? 1_555 84.3 ? 5 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? J HOH . ? A HOH 573 ? 1_555 160.6 ? 6 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 O ? J HOH . ? A HOH 573 ? 1_555 103.7 ? 7 O ? A LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 164.5 ? 8 O ? A LEU 62 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 86.9 ? 9 O ? A VAL 65 ? A VAL 65 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 97.8 ? 10 O ? J HOH . ? A HOH 573 ? 1_555 NA ? H NA . ? A NA 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 85.7 ? 11 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 96.0 ? 12 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 88.7 ? 13 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 84.3 ? 14 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? J HOH . ? A HOH 536 ? 1_555 90.4 ? 15 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? J HOH . ? A HOH 536 ? 1_555 96.2 ? 16 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? J HOH . ? A HOH 536 ? 1_555 179.0 ? 17 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 163.8 ? 18 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 99.6 ? 19 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 97.1 ? 20 O ? J HOH . ? A HOH 536 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 OP1 ? C DG 9 ? P DG 9 ? 1_555 83.6 ? 21 O ? A THR 101 ? A THR 101 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? P HOH 106 ? 1_555 78.5 ? 22 O ? A VAL 103 ? A VAL 103 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? P HOH 106 ? 1_555 164.4 ? 23 O ? A ILE 106 ? A ILE 106 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? P HOH 106 ? 1_555 81.0 ? 24 O ? J HOH . ? A HOH 536 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? P HOH 106 ? 1_555 98.4 ? 25 OP1 ? C DG 9 ? P DG 9 ? 1_555 NA ? I NA . ? A NA 405 ? 1_555 O ? L HOH . ? P HOH 106 ? 1_555 87.4 ? 26 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 90.7 ? 27 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O3G ? G 6CF . ? A 6CF 403 ? 1_555 86.4 ? 28 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O3G ? G 6CF . ? A 6CF 403 ? 1_555 175.1 ? 29 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O2B ? G 6CF . ? A 6CF 403 ? 1_555 169.1 ? 30 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O2B ? G 6CF . ? A 6CF 403 ? 1_555 91.6 ? 31 O3G ? G 6CF . ? A 6CF 403 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O2B ? G 6CF . ? A 6CF 403 ? 1_555 90.5 ? 32 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 106.8 ? 33 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 85.0 ? 34 O3G ? G 6CF . ? A 6CF 403 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 99.6 ? 35 O2B ? G 6CF . ? A 6CF 403 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 84.1 ? 36 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 78.0 ? 37 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 80.7 ? 38 O3G ? G 6CF . ? A 6CF 403 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 94.8 ? 39 O2B ? G 6CF . ? A 6CF 403 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 91.8 ? 40 O1A ? G 6CF . ? A 6CF 403 ? 1_555 MN ? E MN . ? A MN 401 ? 1_555 O ? J HOH . ? A HOH 505 ? 1_555 165.0 ? 41 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 102.5 ? 42 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 92.4 ? 43 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 91.1 ? 44 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 93.1 ? 45 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 92.6 ? 46 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O1A ? G 6CF . ? A 6CF 403 ? 1_555 172.5 ? 47 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? J HOH . ? A HOH 572 ? 1_555 74.5 ? 48 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? J HOH . ? A HOH 572 ? 1_555 176.3 ? 49 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? J HOH . ? A HOH 572 ? 1_555 91.2 ? 50 O1A ? G 6CF . ? A 6CF 403 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 O ? J HOH . ? A HOH 572 ? 1_555 85.5 ? 51 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 152.2 ? 52 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 105.2 ? 53 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 84.6 ? 54 O1A ? G 6CF . ? A 6CF 403 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 88.2 ? 55 O ? J HOH . ? A HOH 572 ? 1_555 MN ? F MN . ? A MN 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 78.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-12 2 'Structure model' 1 1 2019-07-17 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Refinement description' 4 3 'Structure model' Advisory 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Derived calculations' 8 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 2 'Structure model' software 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' pdbx_struct_conn_angle 8 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 9 3 'Structure model' struct_conn 10 3 'Structure model' struct_ref_seq_dif 11 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 2 'Structure model' '_software.version' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.value' 26 3 'Structure model' '_struct_conn.pdbx_dist_value' 27 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 3 'Structure model' '_struct_ref_seq_dif.details' 42 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 43 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 44 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 25.5232 -0.5780 10.1571 0.0361 0.0583 0.0725 0.0062 0.0493 -0.0200 0.1878 0.0735 0.2247 0.0570 0.0546 -0.0913 -0.0377 -0.0127 -0.1117 0.0137 0.0235 -0.0161 0.0070 0.0113 0.0165 'X-RAY DIFFRACTION' 2 ? refined -1.2957 9.6669 15.0499 0.0024 0.0797 0.0736 -0.0200 0.0234 0.0066 0.0224 0.2272 0.1881 -0.0311 -0.0474 -0.0563 0.0309 0.0135 -0.0188 0.0187 0.0068 0.1301 -0.0023 -0.0972 -0.0348 'X-RAY DIFFRACTION' 3 ? refined 6.4842 8.9303 -9.2876 0.2868 0.5285 0.2978 -0.0073 -0.0000 -0.0242 0.5073 0.1306 0.1212 0.1978 -0.1268 -0.0313 -0.0681 0.3978 -0.0182 -0.0834 0.1142 -0.0139 0.0125 -0.0215 -0.0447 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 10:117) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 118:275) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 276:335) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(phenix.refine: 1.7_650)' ? 1 CNS refinement . ? 2 StructureStudio 'data collection' . ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.483 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.124 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" D DT 2 ? ? "C5'" D DT 2 ? ? "C4'" D DT 2 ? ? 104.38 109.40 -5.02 0.80 N 2 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 103.01 108.00 -4.99 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 11 ? ? -89.45 -71.04 2 1 CYS A 178 ? ? -118.06 -154.56 3 1 GLU A 295 ? ? -62.54 1.44 4 1 GLN A 324 ? ? 77.21 47.45 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A ARG 40 ? N A A ARG 40 N 2 1 Y 0 A ARG 40 ? CA A A ARG 40 CA 3 1 Y 0 A ARG 40 ? C A A ARG 40 C 4 1 Y 0 A ARG 40 ? O A A ARG 40 O 5 1 Y 0 A ARG 40 ? CB A A ARG 40 CB 6 1 Y 0 A ARG 40 ? CG A A ARG 40 CG 7 1 Y 0 A ARG 40 ? CD A A ARG 40 CD 8 1 Y 0 A ARG 40 ? NE A A ARG 40 NE 9 1 Y 0 A ARG 40 ? CZ A A ARG 40 CZ 10 1 Y 0 A ARG 40 ? NH1 A A ARG 40 NH1 11 1 Y 0 A ARG 40 ? NH2 A A ARG 40 NH2 12 1 Y 1 A LYS 244 ? CG ? A LYS 244 CG 13 1 Y 1 A LYS 244 ? CD ? A LYS 244 CD 14 1 Y 1 A LYS 244 ? CE ? A LYS 244 CE 15 1 Y 1 A LYS 244 ? NZ ? A LYS 244 NZ 16 1 Y 1 A LYS 248 ? CG ? A LYS 248 CG 17 1 Y 1 A LYS 248 ? CD ? A LYS 248 CD 18 1 Y 1 A LYS 248 ? CE ? A LYS 248 CE 19 1 Y 1 A LYS 248 ? NZ ? A LYS 248 NZ 20 1 Y 1 A GLU 288 ? CG ? A GLU 288 CG 21 1 Y 1 A GLU 288 ? CD ? A GLU 288 CD 22 1 Y 1 A GLU 288 ? OE1 ? A GLU 288 OE1 23 1 Y 1 A GLU 288 ? OE2 ? A GLU 288 OE2 24 1 Y 1 A VAL 303 ? CG1 ? A VAL 303 CG1 25 1 Y 1 A VAL 303 ? CG2 ? A VAL 303 CG2 26 1 Y 1 A VAL 306 ? CG1 ? A VAL 306 CG1 27 1 Y 1 A VAL 306 ? CG2 ? A VAL 306 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A GLU 9 ? A GLU 9 10 1 Y 1 A THR 205 ? A THR 205 11 1 Y 1 A LYS 206 ? A LYS 206 12 1 Y 1 A GLN 207 ? A GLN 207 13 1 Y 1 A PRO 208 ? A PRO 208 14 1 Y 1 A ASN 245 ? A ASN 245 15 1 Y 1 A ASP 246 ? A ASP 246 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6CF N1 N N N 1 6CF P1 P N N 2 6CF C2 C N N 3 6CF O2 O N N 4 6CF P2 P N N 5 6CF N3 N N N 6 6CF P3 P N N 7 6CF C4 C N N 8 6CF N4 N N N 9 6CF C5 C N N 10 6CF C6 C N N 11 6CF "C1'" C N R 12 6CF F1A F N N 13 6CF O1A O N N 14 6CF O1B O N N 15 6CF O1G O N N 16 6CF "C2'" C N N 17 6CF F2A F N N 18 6CF O2A O N N 19 6CF O2B O N N 20 6CF O2G O N N 21 6CF "C3'" C N S 22 6CF "O3'" O N N 23 6CF C3A C N N 24 6CF O3B O N N 25 6CF O3G O N N 26 6CF "C4'" C N R 27 6CF "O4'" O N N 28 6CF "C5'" C N N 29 6CF "O5'" O N N 30 6CF HN4 H N N 31 6CF HN4A H N N 32 6CF H5 H N N 33 6CF H6 H N N 34 6CF "H1'" H N N 35 6CF HO1A H N N 36 6CF HO1G H N N 37 6CF "H2'" H N N 38 6CF "H2'A" H N N 39 6CF HO2B H N N 40 6CF HO2G H N N 41 6CF "H3'" H N N 42 6CF "HO3'" H N N 43 6CF "H4'" H N N 44 6CF "H5'" H N N 45 6CF "H5'A" H N N 46 ALA N N N N 47 ALA CA C N S 48 ALA C C N N 49 ALA O O N N 50 ALA CB C N N 51 ALA OXT O N N 52 ALA H H N N 53 ALA H2 H N N 54 ALA HA H N N 55 ALA HB1 H N N 56 ALA HB2 H N N 57 ALA HB3 H N N 58 ALA HXT H N N 59 ARG N N N N 60 ARG CA C N S 61 ARG C C N N 62 ARG O O N N 63 ARG CB C N N 64 ARG CG C N N 65 ARG CD C N N 66 ARG NE N N N 67 ARG CZ C N N 68 ARG NH1 N N N 69 ARG NH2 N N N 70 ARG OXT O N N 71 ARG H H N N 72 ARG H2 H N N 73 ARG HA H N N 74 ARG HB2 H N N 75 ARG HB3 H N N 76 ARG HG2 H N N 77 ARG HG3 H N N 78 ARG HD2 H N N 79 ARG HD3 H N N 80 ARG HE H N N 81 ARG HH11 H N N 82 ARG HH12 H N N 83 ARG HH21 H N N 84 ARG HH22 H N N 85 ARG HXT H N N 86 ASN N N N N 87 ASN CA C N S 88 ASN C C N N 89 ASN O O N N 90 ASN CB C N N 91 ASN CG C N N 92 ASN OD1 O N N 93 ASN ND2 N N N 94 ASN OXT O N N 95 ASN H H N N 96 ASN H2 H N N 97 ASN HA H N N 98 ASN HB2 H N N 99 ASN HB3 H N N 100 ASN HD21 H N N 101 ASN HD22 H N N 102 ASN HXT H N N 103 ASP N N N N 104 ASP CA C N S 105 ASP C C N N 106 ASP O O N N 107 ASP CB C N N 108 ASP CG C N N 109 ASP OD1 O N N 110 ASP OD2 O N N 111 ASP OXT O N N 112 ASP H H N N 113 ASP H2 H N N 114 ASP HA H N N 115 ASP HB2 H N N 116 ASP HB3 H N N 117 ASP HD2 H N N 118 ASP HXT H N N 119 CYS N N N N 120 CYS CA C N R 121 CYS C C N N 122 CYS O O N N 123 CYS CB C N N 124 CYS SG S N N 125 CYS OXT O N N 126 CYS H H N N 127 CYS H2 H N N 128 CYS HA H N N 129 CYS HB2 H N N 130 CYS HB3 H N N 131 CYS HG H N N 132 CYS HXT H N N 133 DA OP3 O N N 134 DA P P N N 135 DA OP1 O N N 136 DA OP2 O N N 137 DA "O5'" O N N 138 DA "C5'" C N N 139 DA "C4'" C N R 140 DA "O4'" O N N 141 DA "C3'" C N S 142 DA "O3'" O N N 143 DA "C2'" C N N 144 DA "C1'" C N R 145 DA N9 N Y N 146 DA C8 C Y N 147 DA N7 N Y N 148 DA C5 C Y N 149 DA C6 C Y N 150 DA N6 N N N 151 DA N1 N Y N 152 DA C2 C Y N 153 DA N3 N Y N 154 DA C4 C Y N 155 DA HOP3 H N N 156 DA HOP2 H N N 157 DA "H5'" H N N 158 DA "H5''" H N N 159 DA "H4'" H N N 160 DA "H3'" H N N 161 DA "HO3'" H N N 162 DA "H2'" H N N 163 DA "H2''" H N N 164 DA "H1'" H N N 165 DA H8 H N N 166 DA H61 H N N 167 DA H62 H N N 168 DA H2 H N N 169 DC OP3 O N N 170 DC P P N N 171 DC OP1 O N N 172 DC OP2 O N N 173 DC "O5'" O N N 174 DC "C5'" C N N 175 DC "C4'" C N R 176 DC "O4'" O N N 177 DC "C3'" C N S 178 DC "O3'" O N N 179 DC "C2'" C N N 180 DC "C1'" C N R 181 DC N1 N N N 182 DC C2 C N N 183 DC O2 O N N 184 DC N3 N N N 185 DC C4 C N N 186 DC N4 N N N 187 DC C5 C N N 188 DC C6 C N N 189 DC HOP3 H N N 190 DC HOP2 H N N 191 DC "H5'" H N N 192 DC "H5''" H N N 193 DC "H4'" H N N 194 DC "H3'" H N N 195 DC "HO3'" H N N 196 DC "H2'" H N N 197 DC "H2''" H N N 198 DC "H1'" H N N 199 DC H41 H N N 200 DC H42 H N N 201 DC H5 H N N 202 DC H6 H N N 203 DG OP3 O N N 204 DG P P N N 205 DG OP1 O N N 206 DG OP2 O N N 207 DG "O5'" O N N 208 DG "C5'" C N N 209 DG "C4'" C N R 210 DG "O4'" O N N 211 DG "C3'" C N S 212 DG "O3'" O N N 213 DG "C2'" C N N 214 DG "C1'" C N R 215 DG N9 N Y N 216 DG C8 C Y N 217 DG N7 N Y N 218 DG C5 C Y N 219 DG C6 C N N 220 DG O6 O N N 221 DG N1 N N N 222 DG C2 C N N 223 DG N2 N N N 224 DG N3 N N N 225 DG C4 C Y N 226 DG HOP3 H N N 227 DG HOP2 H N N 228 DG "H5'" H N N 229 DG "H5''" H N N 230 DG "H4'" H N N 231 DG "H3'" H N N 232 DG "HO3'" H N N 233 DG "H2'" H N N 234 DG "H2''" H N N 235 DG "H1'" H N N 236 DG H8 H N N 237 DG H1 H N N 238 DG H21 H N N 239 DG H22 H N N 240 DT OP3 O N N 241 DT P P N N 242 DT OP1 O N N 243 DT OP2 O N N 244 DT "O5'" O N N 245 DT "C5'" C N N 246 DT "C4'" C N R 247 DT "O4'" O N N 248 DT "C3'" C N S 249 DT "O3'" O N N 250 DT "C2'" C N N 251 DT "C1'" C N R 252 DT N1 N N N 253 DT C2 C N N 254 DT O2 O N N 255 DT N3 N N N 256 DT C4 C N N 257 DT O4 O N N 258 DT C5 C N N 259 DT C7 C N N 260 DT C6 C N N 261 DT HOP3 H N N 262 DT HOP2 H N N 263 DT "H5'" H N N 264 DT "H5''" H N N 265 DT "H4'" H N N 266 DT "H3'" H N N 267 DT "HO3'" H N N 268 DT "H2'" H N N 269 DT "H2''" H N N 270 DT "H1'" H N N 271 DT H3 H N N 272 DT H71 H N N 273 DT H72 H N N 274 DT H73 H N N 275 DT H6 H N N 276 GLN N N N N 277 GLN CA C N S 278 GLN C C N N 279 GLN O O N N 280 GLN CB C N N 281 GLN CG C N N 282 GLN CD C N N 283 GLN OE1 O N N 284 GLN NE2 N N N 285 GLN OXT O N N 286 GLN H H N N 287 GLN H2 H N N 288 GLN HA H N N 289 GLN HB2 H N N 290 GLN HB3 H N N 291 GLN HG2 H N N 292 GLN HG3 H N N 293 GLN HE21 H N N 294 GLN HE22 H N N 295 GLN HXT H N N 296 GLU N N N N 297 GLU CA C N S 298 GLU C C N N 299 GLU O O N N 300 GLU CB C N N 301 GLU CG C N N 302 GLU CD C N N 303 GLU OE1 O N N 304 GLU OE2 O N N 305 GLU OXT O N N 306 GLU H H N N 307 GLU H2 H N N 308 GLU HA H N N 309 GLU HB2 H N N 310 GLU HB3 H N N 311 GLU HG2 H N N 312 GLU HG3 H N N 313 GLU HE2 H N N 314 GLU HXT H N N 315 GLY N N N N 316 GLY CA C N N 317 GLY C C N N 318 GLY O O N N 319 GLY OXT O N N 320 GLY H H N N 321 GLY H2 H N N 322 GLY HA2 H N N 323 GLY HA3 H N N 324 GLY HXT H N N 325 HIS N N N N 326 HIS CA C N S 327 HIS C C N N 328 HIS O O N N 329 HIS CB C N N 330 HIS CG C Y N 331 HIS ND1 N Y N 332 HIS CD2 C Y N 333 HIS CE1 C Y N 334 HIS NE2 N Y N 335 HIS OXT O N N 336 HIS H H N N 337 HIS H2 H N N 338 HIS HA H N N 339 HIS HB2 H N N 340 HIS HB3 H N N 341 HIS HD1 H N N 342 HIS HD2 H N N 343 HIS HE1 H N N 344 HIS HE2 H N N 345 HIS HXT H N N 346 HOH O O N N 347 HOH H1 H N N 348 HOH H2 H N N 349 ILE N N N N 350 ILE CA C N S 351 ILE C C N N 352 ILE O O N N 353 ILE CB C N S 354 ILE CG1 C N N 355 ILE CG2 C N N 356 ILE CD1 C N N 357 ILE OXT O N N 358 ILE H H N N 359 ILE H2 H N N 360 ILE HA H N N 361 ILE HB H N N 362 ILE HG12 H N N 363 ILE HG13 H N N 364 ILE HG21 H N N 365 ILE HG22 H N N 366 ILE HG23 H N N 367 ILE HD11 H N N 368 ILE HD12 H N N 369 ILE HD13 H N N 370 ILE HXT H N N 371 LEU N N N N 372 LEU CA C N S 373 LEU C C N N 374 LEU O O N N 375 LEU CB C N N 376 LEU CG C N N 377 LEU CD1 C N N 378 LEU CD2 C N N 379 LEU OXT O N N 380 LEU H H N N 381 LEU H2 H N N 382 LEU HA H N N 383 LEU HB2 H N N 384 LEU HB3 H N N 385 LEU HG H N N 386 LEU HD11 H N N 387 LEU HD12 H N N 388 LEU HD13 H N N 389 LEU HD21 H N N 390 LEU HD22 H N N 391 LEU HD23 H N N 392 LEU HXT H N N 393 LYS N N N N 394 LYS CA C N S 395 LYS C C N N 396 LYS O O N N 397 LYS CB C N N 398 LYS CG C N N 399 LYS CD C N N 400 LYS CE C N N 401 LYS NZ N N N 402 LYS OXT O N N 403 LYS H H N N 404 LYS H2 H N N 405 LYS HA H N N 406 LYS HB2 H N N 407 LYS HB3 H N N 408 LYS HG2 H N N 409 LYS HG3 H N N 410 LYS HD2 H N N 411 LYS HD3 H N N 412 LYS HE2 H N N 413 LYS HE3 H N N 414 LYS HZ1 H N N 415 LYS HZ2 H N N 416 LYS HZ3 H N N 417 LYS HXT H N N 418 MET N N N N 419 MET CA C N S 420 MET C C N N 421 MET O O N N 422 MET CB C N N 423 MET CG C N N 424 MET SD S N N 425 MET CE C N N 426 MET OXT O N N 427 MET H H N N 428 MET H2 H N N 429 MET HA H N N 430 MET HB2 H N N 431 MET HB3 H N N 432 MET HG2 H N N 433 MET HG3 H N N 434 MET HE1 H N N 435 MET HE2 H N N 436 MET HE3 H N N 437 MET HXT H N N 438 MN MN MN N N 439 NA NA NA N N 440 PHE N N N N 441 PHE CA C N S 442 PHE C C N N 443 PHE O O N N 444 PHE CB C N N 445 PHE CG C Y N 446 PHE CD1 C Y N 447 PHE CD2 C Y N 448 PHE CE1 C Y N 449 PHE CE2 C Y N 450 PHE CZ C Y N 451 PHE OXT O N N 452 PHE H H N N 453 PHE H2 H N N 454 PHE HA H N N 455 PHE HB2 H N N 456 PHE HB3 H N N 457 PHE HD1 H N N 458 PHE HD2 H N N 459 PHE HE1 H N N 460 PHE HE2 H N N 461 PHE HZ H N N 462 PHE HXT H N N 463 PRO N N N N 464 PRO CA C N S 465 PRO C C N N 466 PRO O O N N 467 PRO CB C N N 468 PRO CG C N N 469 PRO CD C N N 470 PRO OXT O N N 471 PRO H H N N 472 PRO HA H N N 473 PRO HB2 H N N 474 PRO HB3 H N N 475 PRO HG2 H N N 476 PRO HG3 H N N 477 PRO HD2 H N N 478 PRO HD3 H N N 479 PRO HXT H N N 480 SER N N N N 481 SER CA C N S 482 SER C C N N 483 SER O O N N 484 SER CB C N N 485 SER OG O N N 486 SER OXT O N N 487 SER H H N N 488 SER H2 H N N 489 SER HA H N N 490 SER HB2 H N N 491 SER HB3 H N N 492 SER HG H N N 493 SER HXT H N N 494 THR N N N N 495 THR CA C N S 496 THR C C N N 497 THR O O N N 498 THR CB C N R 499 THR OG1 O N N 500 THR CG2 C N N 501 THR OXT O N N 502 THR H H N N 503 THR H2 H N N 504 THR HA H N N 505 THR HB H N N 506 THR HG1 H N N 507 THR HG21 H N N 508 THR HG22 H N N 509 THR HG23 H N N 510 THR HXT H N N 511 TRP N N N N 512 TRP CA C N S 513 TRP C C N N 514 TRP O O N N 515 TRP CB C N N 516 TRP CG C Y N 517 TRP CD1 C Y N 518 TRP CD2 C Y N 519 TRP NE1 N Y N 520 TRP CE2 C Y N 521 TRP CE3 C Y N 522 TRP CZ2 C Y N 523 TRP CZ3 C Y N 524 TRP CH2 C Y N 525 TRP OXT O N N 526 TRP H H N N 527 TRP H2 H N N 528 TRP HA H N N 529 TRP HB2 H N N 530 TRP HB3 H N N 531 TRP HD1 H N N 532 TRP HE1 H N N 533 TRP HE3 H N N 534 TRP HZ2 H N N 535 TRP HZ3 H N N 536 TRP HH2 H N N 537 TRP HXT H N N 538 TYR N N N N 539 TYR CA C N S 540 TYR C C N N 541 TYR O O N N 542 TYR CB C N N 543 TYR CG C Y N 544 TYR CD1 C Y N 545 TYR CD2 C Y N 546 TYR CE1 C Y N 547 TYR CE2 C Y N 548 TYR CZ C Y N 549 TYR OH O N N 550 TYR OXT O N N 551 TYR H H N N 552 TYR H2 H N N 553 TYR HA H N N 554 TYR HB2 H N N 555 TYR HB3 H N N 556 TYR HD1 H N N 557 TYR HD2 H N N 558 TYR HE1 H N N 559 TYR HE2 H N N 560 TYR HH H N N 561 TYR HXT H N N 562 VAL N N N N 563 VAL CA C N S 564 VAL C C N N 565 VAL O O N N 566 VAL CB C N N 567 VAL CG1 C N N 568 VAL CG2 C N N 569 VAL OXT O N N 570 VAL H H N N 571 VAL H2 H N N 572 VAL HA H N N 573 VAL HB H N N 574 VAL HG11 H N N 575 VAL HG12 H N N 576 VAL HG13 H N N 577 VAL HG21 H N N 578 VAL HG22 H N N 579 VAL HG23 H N N 580 VAL HXT H N N 581 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6CF C2 N1 sing N N 1 6CF "C1'" N1 sing N N 2 6CF N1 C6 sing N N 3 6CF "O5'" P1 sing N N 4 6CF C3A P1 sing N N 5 6CF P1 O2A doub N N 6 6CF P1 O1A sing N N 7 6CF O2 C2 doub N N 8 6CF C2 N3 sing N N 9 6CF O1B P2 doub N N 10 6CF P2 O2B sing N N 11 6CF P2 C3A sing N N 12 6CF P2 O3B sing N N 13 6CF N3 C4 doub N N 14 6CF O3B P3 sing N N 15 6CF P3 O3G doub N N 16 6CF P3 O1G sing N N 17 6CF P3 O2G sing N N 18 6CF C4 N4 sing N N 19 6CF C4 C5 sing N N 20 6CF N4 HN4 sing N N 21 6CF N4 HN4A sing N N 22 6CF C6 C5 doub N N 23 6CF C5 H5 sing N N 24 6CF C6 H6 sing N N 25 6CF "C2'" "C1'" sing N N 26 6CF "C1'" "O4'" sing N N 27 6CF "C1'" "H1'" sing N N 28 6CF F1A C3A sing N N 29 6CF O1A HO1A sing N N 30 6CF O1G HO1G sing N N 31 6CF "C2'" "C3'" sing N N 32 6CF "C2'" "H2'" sing N N 33 6CF "C2'" "H2'A" sing N N 34 6CF C3A F2A sing N N 35 6CF O2B HO2B sing N N 36 6CF O2G HO2G sing N N 37 6CF "O3'" "C3'" sing N N 38 6CF "C3'" "C4'" sing N N 39 6CF "C3'" "H3'" sing N N 40 6CF "O3'" "HO3'" sing N N 41 6CF "O4'" "C4'" sing N N 42 6CF "C4'" "C5'" sing N N 43 6CF "C4'" "H4'" sing N N 44 6CF "C5'" "O5'" sing N N 45 6CF "C5'" "H5'" sing N N 46 6CF "C5'" "H5'A" sing N N 47 ALA N CA sing N N 48 ALA N H sing N N 49 ALA N H2 sing N N 50 ALA CA C sing N N 51 ALA CA CB sing N N 52 ALA CA HA sing N N 53 ALA C O doub N N 54 ALA C OXT sing N N 55 ALA CB HB1 sing N N 56 ALA CB HB2 sing N N 57 ALA CB HB3 sing N N 58 ALA OXT HXT sing N N 59 ARG N CA sing N N 60 ARG N H sing N N 61 ARG N H2 sing N N 62 ARG CA C sing N N 63 ARG CA CB sing N N 64 ARG CA HA sing N N 65 ARG C O doub N N 66 ARG C OXT sing N N 67 ARG CB CG sing N N 68 ARG CB HB2 sing N N 69 ARG CB HB3 sing N N 70 ARG CG CD sing N N 71 ARG CG HG2 sing N N 72 ARG CG HG3 sing N N 73 ARG CD NE sing N N 74 ARG CD HD2 sing N N 75 ARG CD HD3 sing N N 76 ARG NE CZ sing N N 77 ARG NE HE sing N N 78 ARG CZ NH1 sing N N 79 ARG CZ NH2 doub N N 80 ARG NH1 HH11 sing N N 81 ARG NH1 HH12 sing N N 82 ARG NH2 HH21 sing N N 83 ARG NH2 HH22 sing N N 84 ARG OXT HXT sing N N 85 ASN N CA sing N N 86 ASN N H sing N N 87 ASN N H2 sing N N 88 ASN CA C sing N N 89 ASN CA CB sing N N 90 ASN CA HA sing N N 91 ASN C O doub N N 92 ASN C OXT sing N N 93 ASN CB CG sing N N 94 ASN CB HB2 sing N N 95 ASN CB HB3 sing N N 96 ASN CG OD1 doub N N 97 ASN CG ND2 sing N N 98 ASN ND2 HD21 sing N N 99 ASN ND2 HD22 sing N N 100 ASN OXT HXT sing N N 101 ASP N CA sing N N 102 ASP N H sing N N 103 ASP N H2 sing N N 104 ASP CA C sing N N 105 ASP CA CB sing N N 106 ASP CA HA sing N N 107 ASP C O doub N N 108 ASP C OXT sing N N 109 ASP CB CG sing N N 110 ASP CB HB2 sing N N 111 ASP CB HB3 sing N N 112 ASP CG OD1 doub N N 113 ASP CG OD2 sing N N 114 ASP OD2 HD2 sing N N 115 ASP OXT HXT sing N N 116 CYS N CA sing N N 117 CYS N H sing N N 118 CYS N H2 sing N N 119 CYS CA C sing N N 120 CYS CA CB sing N N 121 CYS CA HA sing N N 122 CYS C O doub N N 123 CYS C OXT sing N N 124 CYS CB SG sing N N 125 CYS CB HB2 sing N N 126 CYS CB HB3 sing N N 127 CYS SG HG sing N N 128 CYS OXT HXT sing N N 129 DA OP3 P sing N N 130 DA OP3 HOP3 sing N N 131 DA P OP1 doub N N 132 DA P OP2 sing N N 133 DA P "O5'" sing N N 134 DA OP2 HOP2 sing N N 135 DA "O5'" "C5'" sing N N 136 DA "C5'" "C4'" sing N N 137 DA "C5'" "H5'" sing N N 138 DA "C5'" "H5''" sing N N 139 DA "C4'" "O4'" sing N N 140 DA "C4'" "C3'" sing N N 141 DA "C4'" "H4'" sing N N 142 DA "O4'" "C1'" sing N N 143 DA "C3'" "O3'" sing N N 144 DA "C3'" "C2'" sing N N 145 DA "C3'" "H3'" sing N N 146 DA "O3'" "HO3'" sing N N 147 DA "C2'" "C1'" sing N N 148 DA "C2'" "H2'" sing N N 149 DA "C2'" "H2''" sing N N 150 DA "C1'" N9 sing N N 151 DA "C1'" "H1'" sing N N 152 DA N9 C8 sing Y N 153 DA N9 C4 sing Y N 154 DA C8 N7 doub Y N 155 DA C8 H8 sing N N 156 DA N7 C5 sing Y N 157 DA C5 C6 sing Y N 158 DA C5 C4 doub Y N 159 DA C6 N6 sing N N 160 DA C6 N1 doub Y N 161 DA N6 H61 sing N N 162 DA N6 H62 sing N N 163 DA N1 C2 sing Y N 164 DA C2 N3 doub Y N 165 DA C2 H2 sing N N 166 DA N3 C4 sing Y N 167 DC OP3 P sing N N 168 DC OP3 HOP3 sing N N 169 DC P OP1 doub N N 170 DC P OP2 sing N N 171 DC P "O5'" sing N N 172 DC OP2 HOP2 sing N N 173 DC "O5'" "C5'" sing N N 174 DC "C5'" "C4'" sing N N 175 DC "C5'" "H5'" sing N N 176 DC "C5'" "H5''" sing N N 177 DC "C4'" "O4'" sing N N 178 DC "C4'" "C3'" sing N N 179 DC "C4'" "H4'" sing N N 180 DC "O4'" "C1'" sing N N 181 DC "C3'" "O3'" sing N N 182 DC "C3'" "C2'" sing N N 183 DC "C3'" "H3'" sing N N 184 DC "O3'" "HO3'" sing N N 185 DC "C2'" "C1'" sing N N 186 DC "C2'" "H2'" sing N N 187 DC "C2'" "H2''" sing N N 188 DC "C1'" N1 sing N N 189 DC "C1'" "H1'" sing N N 190 DC N1 C2 sing N N 191 DC N1 C6 sing N N 192 DC C2 O2 doub N N 193 DC C2 N3 sing N N 194 DC N3 C4 doub N N 195 DC C4 N4 sing N N 196 DC C4 C5 sing N N 197 DC N4 H41 sing N N 198 DC N4 H42 sing N N 199 DC C5 C6 doub N N 200 DC C5 H5 sing N N 201 DC C6 H6 sing N N 202 DG OP3 P sing N N 203 DG OP3 HOP3 sing N N 204 DG P OP1 doub N N 205 DG P OP2 sing N N 206 DG P "O5'" sing N N 207 DG OP2 HOP2 sing N N 208 DG "O5'" "C5'" sing N N 209 DG "C5'" "C4'" sing N N 210 DG "C5'" "H5'" sing N N 211 DG "C5'" "H5''" sing N N 212 DG "C4'" "O4'" sing N N 213 DG "C4'" "C3'" sing N N 214 DG "C4'" "H4'" sing N N 215 DG "O4'" "C1'" sing N N 216 DG "C3'" "O3'" sing N N 217 DG "C3'" "C2'" sing N N 218 DG "C3'" "H3'" sing N N 219 DG "O3'" "HO3'" sing N N 220 DG "C2'" "C1'" sing N N 221 DG "C2'" "H2'" sing N N 222 DG "C2'" "H2''" sing N N 223 DG "C1'" N9 sing N N 224 DG "C1'" "H1'" sing N N 225 DG N9 C8 sing Y N 226 DG N9 C4 sing Y N 227 DG C8 N7 doub Y N 228 DG C8 H8 sing N N 229 DG N7 C5 sing Y N 230 DG C5 C6 sing N N 231 DG C5 C4 doub Y N 232 DG C6 O6 doub N N 233 DG C6 N1 sing N N 234 DG N1 C2 sing N N 235 DG N1 H1 sing N N 236 DG C2 N2 sing N N 237 DG C2 N3 doub N N 238 DG N2 H21 sing N N 239 DG N2 H22 sing N N 240 DG N3 C4 sing N N 241 DT OP3 P sing N N 242 DT OP3 HOP3 sing N N 243 DT P OP1 doub N N 244 DT P OP2 sing N N 245 DT P "O5'" sing N N 246 DT OP2 HOP2 sing N N 247 DT "O5'" "C5'" sing N N 248 DT "C5'" "C4'" sing N N 249 DT "C5'" "H5'" sing N N 250 DT "C5'" "H5''" sing N N 251 DT "C4'" "O4'" sing N N 252 DT "C4'" "C3'" sing N N 253 DT "C4'" "H4'" sing N N 254 DT "O4'" "C1'" sing N N 255 DT "C3'" "O3'" sing N N 256 DT "C3'" "C2'" sing N N 257 DT "C3'" "H3'" sing N N 258 DT "O3'" "HO3'" sing N N 259 DT "C2'" "C1'" sing N N 260 DT "C2'" "H2'" sing N N 261 DT "C2'" "H2''" sing N N 262 DT "C1'" N1 sing N N 263 DT "C1'" "H1'" sing N N 264 DT N1 C2 sing N N 265 DT N1 C6 sing N N 266 DT C2 O2 doub N N 267 DT C2 N3 sing N N 268 DT N3 C4 sing N N 269 DT N3 H3 sing N N 270 DT C4 O4 doub N N 271 DT C4 C5 sing N N 272 DT C5 C7 sing N N 273 DT C5 C6 doub N N 274 DT C7 H71 sing N N 275 DT C7 H72 sing N N 276 DT C7 H73 sing N N 277 DT C6 H6 sing N N 278 GLN N CA sing N N 279 GLN N H sing N N 280 GLN N H2 sing N N 281 GLN CA C sing N N 282 GLN CA CB sing N N 283 GLN CA HA sing N N 284 GLN C O doub N N 285 GLN C OXT sing N N 286 GLN CB CG sing N N 287 GLN CB HB2 sing N N 288 GLN CB HB3 sing N N 289 GLN CG CD sing N N 290 GLN CG HG2 sing N N 291 GLN CG HG3 sing N N 292 GLN CD OE1 doub N N 293 GLN CD NE2 sing N N 294 GLN NE2 HE21 sing N N 295 GLN NE2 HE22 sing N N 296 GLN OXT HXT sing N N 297 GLU N CA sing N N 298 GLU N H sing N N 299 GLU N H2 sing N N 300 GLU CA C sing N N 301 GLU CA CB sing N N 302 GLU CA HA sing N N 303 GLU C O doub N N 304 GLU C OXT sing N N 305 GLU CB CG sing N N 306 GLU CB HB2 sing N N 307 GLU CB HB3 sing N N 308 GLU CG CD sing N N 309 GLU CG HG2 sing N N 310 GLU CG HG3 sing N N 311 GLU CD OE1 doub N N 312 GLU CD OE2 sing N N 313 GLU OE2 HE2 sing N N 314 GLU OXT HXT sing N N 315 GLY N CA sing N N 316 GLY N H sing N N 317 GLY N H2 sing N N 318 GLY CA C sing N N 319 GLY CA HA2 sing N N 320 GLY CA HA3 sing N N 321 GLY C O doub N N 322 GLY C OXT sing N N 323 GLY OXT HXT sing N N 324 HIS N CA sing N N 325 HIS N H sing N N 326 HIS N H2 sing N N 327 HIS CA C sing N N 328 HIS CA CB sing N N 329 HIS CA HA sing N N 330 HIS C O doub N N 331 HIS C OXT sing N N 332 HIS CB CG sing N N 333 HIS CB HB2 sing N N 334 HIS CB HB3 sing N N 335 HIS CG ND1 sing Y N 336 HIS CG CD2 doub Y N 337 HIS ND1 CE1 doub Y N 338 HIS ND1 HD1 sing N N 339 HIS CD2 NE2 sing Y N 340 HIS CD2 HD2 sing N N 341 HIS CE1 NE2 sing Y N 342 HIS CE1 HE1 sing N N 343 HIS NE2 HE2 sing N N 344 HIS OXT HXT sing N N 345 HOH O H1 sing N N 346 HOH O H2 sing N N 347 ILE N CA sing N N 348 ILE N H sing N N 349 ILE N H2 sing N N 350 ILE CA C sing N N 351 ILE CA CB sing N N 352 ILE CA HA sing N N 353 ILE C O doub N N 354 ILE C OXT sing N N 355 ILE CB CG1 sing N N 356 ILE CB CG2 sing N N 357 ILE CB HB sing N N 358 ILE CG1 CD1 sing N N 359 ILE CG1 HG12 sing N N 360 ILE CG1 HG13 sing N N 361 ILE CG2 HG21 sing N N 362 ILE CG2 HG22 sing N N 363 ILE CG2 HG23 sing N N 364 ILE CD1 HD11 sing N N 365 ILE CD1 HD12 sing N N 366 ILE CD1 HD13 sing N N 367 ILE OXT HXT sing N N 368 LEU N CA sing N N 369 LEU N H sing N N 370 LEU N H2 sing N N 371 LEU CA C sing N N 372 LEU CA CB sing N N 373 LEU CA HA sing N N 374 LEU C O doub N N 375 LEU C OXT sing N N 376 LEU CB CG sing N N 377 LEU CB HB2 sing N N 378 LEU CB HB3 sing N N 379 LEU CG CD1 sing N N 380 LEU CG CD2 sing N N 381 LEU CG HG sing N N 382 LEU CD1 HD11 sing N N 383 LEU CD1 HD12 sing N N 384 LEU CD1 HD13 sing N N 385 LEU CD2 HD21 sing N N 386 LEU CD2 HD22 sing N N 387 LEU CD2 HD23 sing N N 388 LEU OXT HXT sing N N 389 LYS N CA sing N N 390 LYS N H sing N N 391 LYS N H2 sing N N 392 LYS CA C sing N N 393 LYS CA CB sing N N 394 LYS CA HA sing N N 395 LYS C O doub N N 396 LYS C OXT sing N N 397 LYS CB CG sing N N 398 LYS CB HB2 sing N N 399 LYS CB HB3 sing N N 400 LYS CG CD sing N N 401 LYS CG HG2 sing N N 402 LYS CG HG3 sing N N 403 LYS CD CE sing N N 404 LYS CD HD2 sing N N 405 LYS CD HD3 sing N N 406 LYS CE NZ sing N N 407 LYS CE HE2 sing N N 408 LYS CE HE3 sing N N 409 LYS NZ HZ1 sing N N 410 LYS NZ HZ2 sing N N 411 LYS NZ HZ3 sing N N 412 LYS OXT HXT sing N N 413 MET N CA sing N N 414 MET N H sing N N 415 MET N H2 sing N N 416 MET CA C sing N N 417 MET CA CB sing N N 418 MET CA HA sing N N 419 MET C O doub N N 420 MET C OXT sing N N 421 MET CB CG sing N N 422 MET CB HB2 sing N N 423 MET CB HB3 sing N N 424 MET CG SD sing N N 425 MET CG HG2 sing N N 426 MET CG HG3 sing N N 427 MET SD CE sing N N 428 MET CE HE1 sing N N 429 MET CE HE2 sing N N 430 MET CE HE3 sing N N 431 MET OXT HXT sing N N 432 PHE N CA sing N N 433 PHE N H sing N N 434 PHE N H2 sing N N 435 PHE CA C sing N N 436 PHE CA CB sing N N 437 PHE CA HA sing N N 438 PHE C O doub N N 439 PHE C OXT sing N N 440 PHE CB CG sing N N 441 PHE CB HB2 sing N N 442 PHE CB HB3 sing N N 443 PHE CG CD1 doub Y N 444 PHE CG CD2 sing Y N 445 PHE CD1 CE1 sing Y N 446 PHE CD1 HD1 sing N N 447 PHE CD2 CE2 doub Y N 448 PHE CD2 HD2 sing N N 449 PHE CE1 CZ doub Y N 450 PHE CE1 HE1 sing N N 451 PHE CE2 CZ sing Y N 452 PHE CE2 HE2 sing N N 453 PHE CZ HZ sing N N 454 PHE OXT HXT sing N N 455 PRO N CA sing N N 456 PRO N CD sing N N 457 PRO N H sing N N 458 PRO CA C sing N N 459 PRO CA CB sing N N 460 PRO CA HA sing N N 461 PRO C O doub N N 462 PRO C OXT sing N N 463 PRO CB CG sing N N 464 PRO CB HB2 sing N N 465 PRO CB HB3 sing N N 466 PRO CG CD sing N N 467 PRO CG HG2 sing N N 468 PRO CG HG3 sing N N 469 PRO CD HD2 sing N N 470 PRO CD HD3 sing N N 471 PRO OXT HXT sing N N 472 SER N CA sing N N 473 SER N H sing N N 474 SER N H2 sing N N 475 SER CA C sing N N 476 SER CA CB sing N N 477 SER CA HA sing N N 478 SER C O doub N N 479 SER C OXT sing N N 480 SER CB OG sing N N 481 SER CB HB2 sing N N 482 SER CB HB3 sing N N 483 SER OG HG sing N N 484 SER OXT HXT sing N N 485 THR N CA sing N N 486 THR N H sing N N 487 THR N H2 sing N N 488 THR CA C sing N N 489 THR CA CB sing N N 490 THR CA HA sing N N 491 THR C O doub N N 492 THR C OXT sing N N 493 THR CB OG1 sing N N 494 THR CB CG2 sing N N 495 THR CB HB sing N N 496 THR OG1 HG1 sing N N 497 THR CG2 HG21 sing N N 498 THR CG2 HG22 sing N N 499 THR CG2 HG23 sing N N 500 THR OXT HXT sing N N 501 TRP N CA sing N N 502 TRP N H sing N N 503 TRP N H2 sing N N 504 TRP CA C sing N N 505 TRP CA CB sing N N 506 TRP CA HA sing N N 507 TRP C O doub N N 508 TRP C OXT sing N N 509 TRP CB CG sing N N 510 TRP CB HB2 sing N N 511 TRP CB HB3 sing N N 512 TRP CG CD1 doub Y N 513 TRP CG CD2 sing Y N 514 TRP CD1 NE1 sing Y N 515 TRP CD1 HD1 sing N N 516 TRP CD2 CE2 doub Y N 517 TRP CD2 CE3 sing Y N 518 TRP NE1 CE2 sing Y N 519 TRP NE1 HE1 sing N N 520 TRP CE2 CZ2 sing Y N 521 TRP CE3 CZ3 doub Y N 522 TRP CE3 HE3 sing N N 523 TRP CZ2 CH2 doub Y N 524 TRP CZ2 HZ2 sing N N 525 TRP CZ3 CH2 sing Y N 526 TRP CZ3 HZ3 sing N N 527 TRP CH2 HH2 sing N N 528 TRP OXT HXT sing N N 529 TYR N CA sing N N 530 TYR N H sing N N 531 TYR N H2 sing N N 532 TYR CA C sing N N 533 TYR CA CB sing N N 534 TYR CA HA sing N N 535 TYR C O doub N N 536 TYR C OXT sing N N 537 TYR CB CG sing N N 538 TYR CB HB2 sing N N 539 TYR CB HB3 sing N N 540 TYR CG CD1 doub Y N 541 TYR CG CD2 sing Y N 542 TYR CD1 CE1 sing Y N 543 TYR CD1 HD1 sing N N 544 TYR CD2 CE2 doub Y N 545 TYR CD2 HD2 sing N N 546 TYR CE1 CZ doub Y N 547 TYR CE1 HE1 sing N N 548 TYR CE2 CZ sing Y N 549 TYR CE2 HE2 sing N N 550 TYR CZ OH sing N N 551 TYR OH HH sing N N 552 TYR OXT HXT sing N N 553 VAL N CA sing N N 554 VAL N H sing N N 555 VAL N H2 sing N N 556 VAL CA C sing N N 557 VAL CA CB sing N N 558 VAL CA HA sing N N 559 VAL C O doub N N 560 VAL C OXT sing N N 561 VAL CB CG1 sing N N 562 VAL CB CG2 sing N N 563 VAL CB HB sing N N 564 VAL CG1 HG11 sing N N 565 VAL CG1 HG12 sing N N 566 VAL CG1 HG13 sing N N 567 VAL CG2 HG21 sing N N 568 VAL CG2 HG22 sing N N 569 VAL CG2 HG23 sing N N 570 VAL OXT HXT sing N N 571 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4F5Q 'double helix' 4F5Q 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 -0.427 -0.203 -0.107 -8.531 -1.299 1.328 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.140 -0.165 0.428 -7.733 -14.050 -3.542 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 0.231 -0.550 -0.196 6.840 -10.617 -1.496 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 0.216 -0.429 0.550 3.750 -16.212 -2.653 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 -0.206 -0.402 0.308 9.016 -8.586 0.316 5 D_DG5:DC1_T D 5 ? T 1 ? 19 1 1 C DG 1 1_555 D DC 16 1_555 0.468 5.016 0.674 -14.651 -2.525 -74.416 6 P_DG1:DC16_T P 1 ? T 16 ? ? ? 1 C DC 2 1_555 D DG 15 1_555 0.132 -0.125 0.263 -5.789 -10.070 -0.403 7 P_DC2:DG15_T P 2 ? T 15 ? 19 1 1 C DT 3 1_555 D DA 14 1_555 -0.176 -0.256 0.081 -0.667 -13.584 1.402 8 P_DT3:DA14_T P 3 ? T 14 ? 20 1 1 C DG 4 1_555 D DC 13 1_555 -0.327 -0.182 0.059 -2.085 -14.493 2.087 9 P_DG4:DC13_T P 4 ? T 13 ? 19 1 1 C DA 5 1_555 D DT 12 1_555 -0.267 -0.148 0.105 -4.676 -14.262 2.228 10 P_DA5:DT12_T P 5 ? T 12 ? 20 1 1 C DT 6 1_555 D DA 11 1_555 -0.433 -0.106 0.023 1.177 -5.183 -1.992 11 P_DT6:DA11_T P 6 ? T 11 ? 20 1 1 C DG 7 1_555 D DC 10 1_555 -0.112 -0.133 0.199 -3.436 -3.117 -1.537 12 P_DG7:DC10_T P 7 ? T 10 ? 19 1 1 C DC 8 1_555 D DG 9 1_555 0.067 -0.169 -0.463 5.285 -4.689 1.825 13 P_DC8:DG9_T P 8 ? T 9 ? 19 1 1 C DG 9 1_555 D DC 8 1_555 -0.372 0.059 -0.577 -2.420 5.756 5.901 14 P_DG9:DC8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D DG 7 1_555 0.769 0.103 -0.364 -13.749 2.795 6.671 15 P_DC10:DG7_T P 10 ? T 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.752 -0.523 3.286 -3.475 3.344 30.840 -1.614 0.731 3.276 6.240 6.484 31.206 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 0.603 1.486 2.965 8.012 -1.982 43.102 2.162 -0.111 2.958 -2.668 -10.787 43.848 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 -0.368 1.434 3.440 -4.069 1.532 37.600 2.001 0.010 3.512 2.368 6.287 37.842 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 0.644 0.370 3.236 -1.207 3.082 35.631 0.163 -1.221 3.233 5.024 1.968 35.779 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DG 1 1_555 D DC 16 1_555 C DC 2 1_555 D DG 15 1_555 -0.971 2.607 3.536 0.085 3.644 -7.913 -25.334 -6.202 2.134 -24.751 0.579 -8.711 5 PP_DG1DC2:DG15DC16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DC 2 1_555 D DG 15 1_555 C DT 3 1_555 D DA 14 1_555 -0.154 0.131 3.208 3.390 6.324 27.318 -1.179 1.091 3.118 13.105 -7.025 28.227 6 PP_DC2DT3:DA14DG15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DT 3 1_555 D DA 14 1_555 C DG 4 1_555 D DC 13 1_555 0.137 2.300 3.303 1.874 -3.729 49.799 2.990 -0.028 3.137 -4.419 -2.221 49.963 7 PP_DT3DG4:DC13DA14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DG 4 1_555 D DC 13 1_555 C DA 5 1_555 D DT 12 1_555 -0.211 0.537 3.382 -4.848 3.919 34.470 0.275 -0.414 3.418 6.547 8.099 35.013 8 PP_DG4DA5:DT12DC13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DA 5 1_555 D DT 12 1_555 C DT 6 1_555 D DA 11 1_555 0.173 -0.565 3.151 0.553 -1.213 29.079 -0.868 -0.227 3.174 -2.414 -1.102 29.109 9 PP_DA5DT6:DA11DT12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DT 6 1_555 D DA 11 1_555 C DG 7 1_555 D DC 10 1_555 0.507 -0.449 3.454 -0.846 1.005 36.761 -0.855 -0.924 3.429 1.593 1.341 36.784 10 PP_DT6DG7:DC10DA11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DG 7 1_555 D DC 10 1_555 C DC 8 1_555 D DG 9 1_555 0.402 -0.388 3.179 6.415 3.070 31.437 -1.235 0.394 3.146 5.577 -11.653 32.211 11 PP_DG7DC8:DG9DC10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DC 8 1_555 D DG 9 1_555 C DG 9 1_555 D DC 8 1_555 1.621 -0.388 3.862 -1.295 2.190 33.599 -1.085 -3.043 3.767 3.781 2.237 33.692 12 PP_DC8DG9:DC8DG9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DG 9 1_555 D DC 8 1_555 C DC 10 1_555 D DG 7 1_555 -0.605 -0.420 3.811 2.627 4.485 38.985 -1.238 1.259 3.696 6.683 -3.915 39.317 13 PP_DG9DC10:DG7DC8_TT P 9 ? T 8 ? P 10 ? T 7 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MANGANESE (II) ION' MN 6 "2'-deoxy-5'-O-[(S)-{difluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]cytidine" 6CF 7 'SODIUM ION' NA 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FMS _pdbx_initial_refinement_model.details ? #