HEADER TRANSFERASE/TRANSFERASE INHIBITOR 15-MAY-12 4F6V TITLE CRYSTAL STRUCTURE OF DEHYDROSQUALENE SYNTHASE (CRTM) FROM S. AUREUS TITLE 2 COMPLEXED WITH BPH-1034, MG2+ AND FMP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEHYDROSQUALENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 4,4'-DIAPOPHYTOENE SYNTHASE, DAP SYNTHASE, DIAPOPHYTOENE COMPND 5 SYNTHASE; COMPND 6 EC: 2.5.1.96; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: CRTM; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE, DEHYDROSQUALENE SYNTHASE, BPH-1034, DIKETO ACID, KEYWDS 2 VIRULENCE FACTOR, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.-Y.LIN,Y.ZHANG,Y.-L.LIU,E.OLDFIELD REVDAT 4 28-FEB-24 4F6V 1 REMARK SEQADV LINK REVDAT 3 31-JAN-18 4F6V 1 JRNL REVDAT 2 27-JUN-12 4F6V 1 JRNL REVDAT 1 13-JUN-12 4F6V 0 JRNL AUTH Y.ZHANG,F.-Y.LIN,K.LI,W.ZHU,Y.L.LIU,R.CAO,R.PANG,E.LEE, JRNL AUTH 2 J.AXELSON,M.HENSLER,K.WANG,K.J.MOLOHON,Y.WANG,D.A.MITCHELL, JRNL AUTH 3 V.NIZET,E.OLDFIELD JRNL TITL HIV-1 INTEGRASE INHIBITOR-INSPIRED ANTIBACTERIALS TARGETING JRNL TITL 2 ISOPRENOID BIOSYNTHESIS. JRNL REF ACS MED CHEM LETT V. 3 402 2012 JRNL REFN ISSN 1948-5875 JRNL PMID 22662288 JRNL DOI 10.1021/ML300038T REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 14844 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 779 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1050 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2365 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 57 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.93000 REMARK 3 B22 (A**2) : 0.93000 REMARK 3 B33 (A**2) : -1.39000 REMARK 3 B12 (A**2) : 0.46000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.188 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.639 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2473 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3331 ; 0.620 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 279 ; 7.304 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;35.591 ;24.307 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 436 ;18.288 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;21.683 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.052 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1912 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1401 ; 1.275 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2267 ; 2.389 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1072 ; 3.918 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1064 ; 5.950 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4F6V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1000072529. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29174 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2-1.0 M POTASSIUM SODIUM TARTRATE, REMARK 280 PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.57600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.28800 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.28800 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 60.57600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 449 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 ALA A -1 REMARK 465 ALA A 0 REMARK 465 VAL A 53 REMARK 465 TYR A 54 REMARK 465 GLY A 55 REMARK 465 HIS A 285 REMARK 465 ARG A 286 REMARK 465 ILE A 287 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 283 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 284 O HOH A 503 1.96 REMARK 500 CB ASP A 114 O HOH A 523 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 58 -70.02 -47.16 REMARK 500 SER A 82 -109.61 -99.19 REMARK 500 HIS A 116 48.64 -91.57 REMARK 500 ALA A 134 -49.19 -137.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 305 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 168 OD1 REMARK 620 2 ASP A 172 OD2 83.5 REMARK 620 3 ZYM A 301 OAC 98.4 81.6 REMARK 620 4 ZYM A 301 OAD 81.2 132.3 56.7 REMARK 620 5 HOH A 495 O 95.0 120.8 155.1 105.4 REMARK 620 6 HOH A 496 O 161.5 85.1 65.5 96.0 103.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 304 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ZYM A 301 OAA REMARK 620 2 SRT A 302 O2 104.4 REMARK 620 3 FJP A 303 OAE 119.4 103.8 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZYM A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SRT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FJP A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 305 DBREF 4F6V A 1 287 UNP A9JQL9 CRTM_STAAU 1 287 SEQADV 4F6V ALA A -4 UNP A9JQL9 EXPRESSION TAG SEQADV 4F6V ALA A -3 UNP A9JQL9 EXPRESSION TAG SEQADV 4F6V ALA A -2 UNP A9JQL9 EXPRESSION TAG SEQADV 4F6V ALA A -1 UNP A9JQL9 EXPRESSION TAG SEQADV 4F6V ALA A 0 UNP A9JQL9 EXPRESSION TAG SEQRES 1 A 292 ALA ALA ALA ALA ALA MET THR MET MET ASP MET ASN PHE SEQRES 2 A 292 LYS TYR CYS HIS LYS ILE MET LYS LYS HIS SER LYS SER SEQRES 3 A 292 PHE SER TYR ALA PHE ASP LEU LEU PRO GLU ASP GLN ARG SEQRES 4 A 292 LYS ALA VAL TRP ALA ILE TYR ALA VAL CYS ARG LYS ILE SEQRES 5 A 292 ASP ASP SER ILE ASP VAL TYR GLY ASP ILE GLN PHE LEU SEQRES 6 A 292 ASN GLN ILE LYS GLU ASP ILE GLN SER ILE GLU LYS TYR SEQRES 7 A 292 PRO TYR GLU TYR HIS HIS PHE GLN SER ASP ARG ARG ILE SEQRES 8 A 292 MET MET ALA LEU GLN HIS VAL ALA GLN HIS LYS ASN ILE SEQRES 9 A 292 ALA PHE GLN SER PHE TYR ASN LEU ILE ASP THR VAL TYR SEQRES 10 A 292 LYS ASP GLN HIS PHE THR MET PHE GLU THR ASP ALA GLU SEQRES 11 A 292 LEU PHE GLY TYR CYS TYR GLY VAL ALA GLY THR VAL GLY SEQRES 12 A 292 GLU VAL LEU THR PRO ILE LEU SER ASP HIS GLU THR HIS SEQRES 13 A 292 GLN THR TYR ASP VAL ALA ARG ARG LEU GLY GLU SER LEU SEQRES 14 A 292 GLN LEU ILE ASN ILE LEU ARG ASP VAL GLY GLU ASP PHE SEQRES 15 A 292 GLU ASN GLU ARG ILE TYR PHE SER LYS GLN ARG LEU LYS SEQRES 16 A 292 GLN TYR GLU VAL ASP ILE ALA GLU VAL TYR GLN ASN GLY SEQRES 17 A 292 VAL ASN ASN HIS TYR ILE ASP LEU TRP GLU TYR TYR ALA SEQRES 18 A 292 ALA ILE ALA GLU LYS ASP PHE ARG ASP VAL MET ASP GLN SEQRES 19 A 292 ILE LYS VAL PHE SER ILE GLU ALA GLN PRO ILE ILE GLU SEQRES 20 A 292 LEU ALA ALA ARG ILE TYR ILE GLU ILE LEU ASP GLU VAL SEQRES 21 A 292 ARG GLN ALA ASN TYR THR LEU HIS GLU ARG VAL PHE VAL SEQRES 22 A 292 GLU LYS ARG LYS LYS ALA LYS LEU PHE HIS GLU ILE ASN SEQRES 23 A 292 SER LYS TYR HIS ARG ILE HET ZYM A 301 25 HET SRT A 302 10 HET FJP A 303 20 HET MG A 304 1 HET MG A 305 1 HETNAM ZYM 2,4-DIOXO-4-{[3-(3-PHENOXYPHENYL)PROPYL]AMINO}BUTANOIC HETNAM 2 ZYM ACID HETNAM SRT S,R MESO-TARTARIC ACID HETNAM FJP (2E,6Z)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIEN-1-YL HETNAM 2 FJP DIHYDROGEN PHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ZYM C19 H19 N O5 FORMUL 3 SRT C4 H6 O6 FORMUL 4 FJP C15 H27 O4 P FORMUL 5 MG 2(MG 2+) FORMUL 7 HOH *123(H2 O) HELIX 1 1 THR A 2 SER A 19 1 18 HELIX 2 2 SER A 19 ASP A 27 1 9 HELIX 3 3 PRO A 30 ASP A 49 1 20 HELIX 4 4 ILE A 57 TYR A 73 1 17 HELIX 5 5 ASP A 83 LYS A 97 1 15 HELIX 6 6 ALA A 100 GLN A 115 1 16 HELIX 7 7 THR A 122 ALA A 134 1 13 HELIX 8 8 ALA A 134 LEU A 141 1 8 HELIX 9 9 LEU A 141 SER A 146 1 6 HELIX 10 10 THR A 150 ASP A 172 1 23 HELIX 11 11 ASP A 172 ASN A 179 1 8 HELIX 12 12 SER A 185 TYR A 192 1 8 HELIX 13 13 ASP A 195 GLY A 203 1 9 HELIX 14 14 ASN A 205 ASP A 228 1 24 HELIX 15 15 GLN A 229 PHE A 233 5 5 HELIX 16 16 GLU A 236 ALA A 258 1 23 HELIX 17 17 GLU A 269 TYR A 284 1 16 LINK OD1 ASN A 168 MG MG A 305 1555 1555 2.32 LINK OD2 ASP A 172 MG MG A 305 1555 1555 2.37 LINK OAA ZYM A 301 MG MG A 304 1555 1555 2.90 LINK OAC ZYM A 301 MG MG A 305 1555 1555 2.44 LINK OAD ZYM A 301 MG MG A 305 1555 1555 2.54 LINK O2 SRT A 302 MG MG A 304 1555 1555 2.81 LINK OAE FJP A 303 MG MG A 304 1555 1555 2.18 LINK MG MG A 305 O HOH A 495 1555 1555 2.53 LINK MG MG A 305 O HOH A 496 1555 1555 2.49 SITE 1 AC1 15 PHE A 22 TYR A 41 CYS A 44 ARG A 45 SITE 2 AC1 15 ASP A 48 VAL A 133 VAL A 137 GLN A 165 SITE 3 AC1 15 ASN A 168 ARG A 171 ASP A 172 FJP A 303 SITE 4 AC1 15 MG A 304 MG A 305 HOH A 496 SITE 1 AC2 10 HIS A 18 SER A 19 LYS A 20 SER A 21 SITE 2 AC2 10 ARG A 171 ARG A 265 FJP A 303 MG A 304 SITE 3 AC2 10 HOH A 410 HOH A 490 SITE 1 AC3 15 SER A 19 PHE A 22 PHE A 26 TYR A 41 SITE 2 AC3 15 ARG A 45 ALA A 134 GLY A 138 LEU A 160 SITE 3 AC3 15 GLY A 161 LEU A 164 ASN A 168 TYR A 248 SITE 4 AC3 15 ZYM A 301 SRT A 302 MG A 304 SITE 1 AC4 6 ASN A 168 ARG A 171 TYR A 248 ZYM A 301 SITE 2 AC4 6 SRT A 302 FJP A 303 SITE 1 AC5 5 ASN A 168 ASP A 172 ZYM A 301 HOH A 495 SITE 2 AC5 5 HOH A 496 CRYST1 80.712 80.712 90.864 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012390 0.007153 0.000000 0.00000 SCALE2 0.000000 0.014306 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011005 0.00000