HEADER HYDROLASE 25-MAY-12 4FCM TITLE CRYSTAL STRUCTURE OF THE NTF2-LIKE DOMAIN OF HUMAN G3BP1 IN COMPLEX TITLE 2 WITH A PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: NTF2-LIKE DOMAIN; COMPND 5 SYNONYM: G3BP-1, ATP-DEPENDENT DNA HELICASE VIII, HDH VIII, GAP SH3 COMPND 6 DOMAIN-BINDING PROTEIN 1; COMPND 7 EC: 3.6.4.12, 3.6.4.13; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NUCLEOPORIN REPEAT PEPTIDE; COMPND 11 CHAIN: C, D; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: G3BP1, G3BP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES KEYWDS NTF2-LIKE DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR T.VOGNSEN,O.KRISTENSEN REVDAT 5 13-SEP-23 4FCM 1 REMARK SEQADV SHEET REVDAT 4 15-NOV-17 4FCM 1 REMARK REVDAT 3 09-AUG-17 4FCM 1 JRNL REMARK REVDAT 2 18-DEC-13 4FCM 1 JRNL REVDAT 1 05-JUN-13 4FCM 0 JRNL AUTH T.VOGNSEN,I.R.MOLLER,O.KRISTENSEN JRNL TITL CRYSTAL STRUCTURES OF THE HUMAN G3BP1 NTF2-LIKE DOMAIN JRNL TITL 2 VISUALIZE FXFG NUP REPEAT SPECIFICITY. JRNL REF PLOS ONE V. 8 80947 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 24324649 JRNL DOI 10.1371/JOURNAL.PONE.0080947 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 7954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.3833 - 3.8828 0.99 2625 113 0.1942 0.2343 REMARK 3 2 3.8828 - 3.0831 0.99 2493 122 0.2290 0.2755 REMARK 3 3 3.0831 - 2.6900 1.00 2470 131 0.3095 0.4218 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 40.93 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.550 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.20630 REMARK 3 B22 (A**2) : 0.60920 REMARK 3 B33 (A**2) : 9.59720 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2292 REMARK 3 ANGLE : 0.589 3090 REMARK 3 CHIRALITY : 0.044 325 REMARK 3 PLANARITY : 0.002 405 REMARK 3 DIHEDRAL : 12.358 830 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 7:42) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4312 14.7132 -8.7681 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.2683 REMARK 3 T33: 0.2691 T12: -0.0223 REMARK 3 T13: 0.0492 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 3.5711 L22: 2.9276 REMARK 3 L33: 7.8695 L12: -1.5017 REMARK 3 L13: 1.6831 L23: -0.5406 REMARK 3 S TENSOR REMARK 3 S11: -0.1155 S12: -0.2307 S13: -0.1246 REMARK 3 S21: -0.1927 S22: 0.1533 S23: -0.5192 REMARK 3 S31: 0.1366 S32: -0.5995 S33: 0.0381 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 43:116) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9533 9.8280 -10.5288 REMARK 3 T TENSOR REMARK 3 T11: 0.2197 T22: 0.1563 REMARK 3 T33: 0.2485 T12: 0.0295 REMARK 3 T13: 0.0430 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 3.9084 L22: 1.9767 REMARK 3 L33: 3.9444 L12: 0.2479 REMARK 3 L13: 1.3402 L23: -1.2343 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: 0.0351 S13: -0.3727 REMARK 3 S21: -0.0909 S22: 0.0252 S23: -0.1189 REMARK 3 S31: 0.3878 S32: 0.1655 S33: -0.0583 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 117:138) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6381 11.0248 -14.6801 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.3414 REMARK 3 T33: 0.3621 T12: -0.0580 REMARK 3 T13: 0.0253 T23: 0.0819 REMARK 3 L TENSOR REMARK 3 L11: 2.0407 L22: 2.6984 REMARK 3 L33: 0.8515 L12: -4.2761 REMARK 3 L13: -0.2220 L23: 0.5495 REMARK 3 S TENSOR REMARK 3 S11: -0.2028 S12: 0.3463 S13: 0.1217 REMARK 3 S21: 0.0805 S22: 0.1642 S23: 0.0144 REMARK 3 S31: -0.0168 S32: -0.0421 S33: 0.0322 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 1:66) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7510 12.7152 -34.8087 REMARK 3 T TENSOR REMARK 3 T11: 0.4279 T22: 0.3324 REMARK 3 T33: 0.1606 T12: 0.0238 REMARK 3 T13: -0.0443 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 4.0296 L22: 5.0433 REMARK 3 L33: 2.1857 L12: -0.7080 REMARK 3 L13: -0.6993 L23: -1.5774 REMARK 3 S TENSOR REMARK 3 S11: 0.2047 S12: 0.2914 S13: 0.0172 REMARK 3 S21: -0.0901 S22: -0.0927 S23: -0.0140 REMARK 3 S31: 0.1492 S32: 0.3168 S33: -0.0959 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESSEQ 67:138) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4452 11.3299 -27.9016 REMARK 3 T TENSOR REMARK 3 T11: 0.3058 T22: 0.3097 REMARK 3 T33: 0.1147 T12: 0.0569 REMARK 3 T13: -0.0154 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 6.0466 L22: 4.5332 REMARK 3 L33: 2.9159 L12: 1.3151 REMARK 3 L13: -0.0360 L23: -0.3803 REMARK 3 S TENSOR REMARK 3 S11: -0.0989 S12: 0.4540 S13: -0.0490 REMARK 3 S21: -0.2249 S22: 0.0657 S23: -0.1159 REMARK 3 S31: 0.2377 S32: 0.1915 S33: 0.0361 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN C AND (RESSEQ 2:4) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0807 15.9645 -11.0542 REMARK 3 T TENSOR REMARK 3 T11: -0.1156 T22: 0.8537 REMARK 3 T33: 0.7300 T12: 0.2480 REMARK 3 T13: 0.0862 T23: 0.0861 REMARK 3 L TENSOR REMARK 3 L11: 2.1487 L22: 1.6750 REMARK 3 L33: 3.7396 L12: -1.0549 REMARK 3 L13: 0.8951 L23: 1.5336 REMARK 3 S TENSOR REMARK 3 S11: 0.1831 S12: -0.1867 S13: 0.1336 REMARK 3 S21: 0.2129 S22: -0.0781 S23: 0.5340 REMARK 3 S31: 0.1621 S32: -0.3546 S33: -0.0370 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN D AND (RESSEQ 2:4) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0664 7.4341 -39.6791 REMARK 3 T TENSOR REMARK 3 T11: 1.1735 T22: 1.1822 REMARK 3 T33: 0.5514 T12: -0.1879 REMARK 3 T13: -0.3617 T23: -0.4714 REMARK 3 L TENSOR REMARK 3 L11: 1.6716 L22: 1.9996 REMARK 3 L33: 3.7247 L12: 3.1053 REMARK 3 L13: -2.4938 L23: -4.8028 REMARK 3 S TENSOR REMARK 3 S11: -0.0126 S12: 0.2509 S13: 0.1105 REMARK 3 S21: -0.2225 S22: -0.0381 S23: 0.1647 REMARK 3 S31: -0.0679 S32: -0.2055 S33: 0.0840 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FCM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072733. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.04 REMARK 200 MONOCHROMATOR : BENT SI (111) CRYSTAL, REMARK 200 HORIZONTALLY FOCUSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7987 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 28.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.12900 REMARK 200 R SYM (I) : 0.15000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.94300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 4FCJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.1 M BIS-TRIS, PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.39000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.74500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.39000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.74500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 MET A 3 REMARK 465 GLU A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 GLY A 139 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 SER B 47 REMARK 465 ASN B 48 REMARK 465 GLY B 49 REMARK 465 GLY B 139 REMARK 465 ASP C 1 REMARK 465 GLY C 7 REMARK 465 SER C 8 REMARK 465 LYS C 9 REMARK 465 ASP D 1 REMARK 465 GLY D 7 REMARK 465 SER D 8 REMARK 465 LYS D 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR A 34 O HOH A 333 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 26 82.28 -151.67 REMARK 500 HIS B 42 -61.93 -129.49 REMARK 500 PRO B 51 -80.37 -51.53 REMARK 500 ASN B 69 75.14 51.79 REMARK 500 GLN B 103 -153.92 -116.64 REMARK 500 SER B 119 -69.39 61.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY B 118 SER B 119 141.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UJM RELATED DB: PDB REMARK 900 RELATED ID: 3Q90 RELATED DB: PDB REMARK 900 RELATED ID: 4FCJ RELATED DB: PDB DBREF 4FCM A 1 139 UNP Q13283 G3BP1_HUMAN 1 139 DBREF 4FCM B 1 139 UNP Q13283 G3BP1_HUMAN 1 139 DBREF 4FCM C 1 9 PDB 4FCM 4FCM 1 9 DBREF 4FCM D 1 9 PDB 4FCM 4FCM 1 9 SEQADV 4FCM GLY A -2 UNP Q13283 EXPRESSION TAG SEQADV 4FCM SER A -1 UNP Q13283 EXPRESSION TAG SEQADV 4FCM HIS A 0 UNP Q13283 EXPRESSION TAG SEQADV 4FCM GLY B -2 UNP Q13283 EXPRESSION TAG SEQADV 4FCM SER B -1 UNP Q13283 EXPRESSION TAG SEQADV 4FCM HIS B 0 UNP Q13283 EXPRESSION TAG SEQRES 1 A 142 GLY SER HIS MET VAL MET GLU LYS PRO SER PRO LEU LEU SEQRES 2 A 142 VAL GLY ARG GLU PHE VAL ARG GLN TYR TYR THR LEU LEU SEQRES 3 A 142 ASN GLN ALA PRO ASP MET LEU HIS ARG PHE TYR GLY LYS SEQRES 4 A 142 ASN SER SER TYR VAL HIS GLY GLY LEU ASP SER ASN GLY SEQRES 5 A 142 LYS PRO ALA ASP ALA VAL TYR GLY GLN LYS GLU ILE HIS SEQRES 6 A 142 ARG LYS VAL MET SER GLN ASN PHE THR ASN CYS HIS THR SEQRES 7 A 142 LYS ILE ARG HIS VAL ASP ALA HIS ALA THR LEU ASN ASP SEQRES 8 A 142 GLY VAL VAL VAL GLN VAL MET GLY LEU LEU SER ASN ASN SEQRES 9 A 142 ASN GLN ALA LEU ARG ARG PHE MET GLN THR PHE VAL LEU SEQRES 10 A 142 ALA PRO GLU GLY SER VAL ALA ASN LYS PHE TYR VAL HIS SEQRES 11 A 142 ASN ASP ILE PHE ARG TYR GLN ASP GLU VAL PHE GLY SEQRES 1 B 142 GLY SER HIS MET VAL MET GLU LYS PRO SER PRO LEU LEU SEQRES 2 B 142 VAL GLY ARG GLU PHE VAL ARG GLN TYR TYR THR LEU LEU SEQRES 3 B 142 ASN GLN ALA PRO ASP MET LEU HIS ARG PHE TYR GLY LYS SEQRES 4 B 142 ASN SER SER TYR VAL HIS GLY GLY LEU ASP SER ASN GLY SEQRES 5 B 142 LYS PRO ALA ASP ALA VAL TYR GLY GLN LYS GLU ILE HIS SEQRES 6 B 142 ARG LYS VAL MET SER GLN ASN PHE THR ASN CYS HIS THR SEQRES 7 B 142 LYS ILE ARG HIS VAL ASP ALA HIS ALA THR LEU ASN ASP SEQRES 8 B 142 GLY VAL VAL VAL GLN VAL MET GLY LEU LEU SER ASN ASN SEQRES 9 B 142 ASN GLN ALA LEU ARG ARG PHE MET GLN THR PHE VAL LEU SEQRES 10 B 142 ALA PRO GLU GLY SER VAL ALA ASN LYS PHE TYR VAL HIS SEQRES 11 B 142 ASN ASP ILE PHE ARG TYR GLN ASP GLU VAL PHE GLY SEQRES 1 C 9 ASP SER GLY PHE SER PHE GLY SER LYS SEQRES 1 D 9 ASP SER GLY PHE SER PHE GLY SER LYS HET PO4 A 201 5 HETNAM PO4 PHOSPHATE ION FORMUL 5 PO4 O4 P 3- FORMUL 6 HOH *62(H2 O) HELIX 1 1 SER A 7 ALA A 26 1 20 HELIX 2 2 PRO A 27 TYR A 34 5 8 HELIX 3 3 GLY A 57 GLN A 68 1 12 HELIX 4 4 SER B 7 ALA B 26 1 20 HELIX 5 5 PRO B 27 ARG B 32 5 6 HELIX 6 6 GLY B 57 SER B 67 1 11 HELIX 7 7 ASP B 135 VAL B 137 5 3 SHEET 1 A 6 VAL A 55 TYR A 56 0 SHEET 2 A 6 SER A 39 HIS A 42 -1 N TYR A 40 O VAL A 55 SHEET 3 A 6 LYS A 123 TYR A 133 1 O PHE A 131 N VAL A 41 SHEET 4 A 6 ARG A 106 PRO A 116 -1 N VAL A 113 O HIS A 127 SHEET 5 A 6 VAL A 90 SER A 99 -1 N VAL A 90 O LEU A 114 SHEET 6 A 6 HIS A 74 ALA A 84 -1 N ARG A 78 O MET A 95 SHEET 1 B 3 VAL A 55 TYR A 56 0 SHEET 2 B 3 SER A 39 HIS A 42 -1 N TYR A 40 O VAL A 55 SHEET 3 B 3 LYS A 123 TYR A 133 1 O PHE A 131 N VAL A 41 SHEET 1 C 6 VAL B 55 TYR B 56 0 SHEET 2 C 6 TYR B 34 VAL B 41 -1 N TYR B 40 O VAL B 55 SHEET 3 C 6 PHE B 124 TYR B 133 1 O HIS B 127 N SER B 39 SHEET 4 C 6 ARG B 106 PRO B 116 -1 N VAL B 113 O HIS B 127 SHEET 5 C 6 GLY B 89 SER B 99 -1 N VAL B 92 O PHE B 112 SHEET 6 C 6 HIS B 74 THR B 85 -1 N HIS B 74 O SER B 99 CISPEP 1 LEU B 45 ASP B 46 0 2.35 SITE 1 AC1 5 ARG A 106 ARG A 107 ASP A 135 HOH A 302 SITE 2 AC1 5 HOH A 322 CRYST1 42.780 71.490 89.500 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023375 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013988 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011173 0.00000