data_4FEP # _entry.id 4FEP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4FEP pdb_00004fep 10.2210/pdb4fep/pdb NDB NA1838 ? ? RCSB RCSB072807 ? ? WWPDB D_1000072807 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-27 2 'Structure model' 1 1 2013-03-27 3 'Structure model' 1 2 2013-05-22 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4FEP _pdbx_database_status.recvd_initial_deposition_date 2012-05-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1U8D . unspecified PDB 4FE5 . unspecified PDB 4FEJ . unspecified PDB 4FEL . unspecified PDB 4FEN . unspecified PDB 4FEO . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stoddard, C.D.' 1 'Trausch, J.J.' 2 'Widmann, J.' 3 'Marcano, J.' 4 'Knight, R.' 5 'Batey, R.T.' 6 # _citation.id primary _citation.title 'Nucleotides Adjacent to the Ligand-Binding Pocket are Linked to Activity Tuning in the Purine Riboswitch.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 425 _citation.page_first 1596 _citation.page_last 1611 _citation.year 2013 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23485418 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2013.02.023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stoddard, C.D.' 1 ? primary 'Widmann, J.' 2 ? primary 'Trausch, J.J.' 3 ? primary 'Marcano-Velazquez, J.G.' 4 ? primary 'Knight, R.' 5 ? primary 'Batey, R.T.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'A24U/U25A/A46G/C74U mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain' 21523.770 1 ? ? ? ? 2 non-polymer syn 9H-PURINE-2,6-DIAMINE 150.141 1 ? ? ? ? 3 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 9 ? ? ? ? 4 water nat water 18.015 571 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGACAUAUAUACGCGUGGAUAUGGCACGCGAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUCC _entity_poly.pdbx_seq_one_letter_code_can GGACAUAUAUACGCGUGGAUAUGGCACGCGAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUCC _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 9H-PURINE-2,6-DIAMINE 6AP 3 'COBALT HEXAMMINE(III)' NCO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 A n 1 6 U n 1 7 A n 1 8 U n 1 9 A n 1 10 U n 1 11 A n 1 12 C n 1 13 G n 1 14 C n 1 15 G n 1 16 U n 1 17 G n 1 18 G n 1 19 A n 1 20 U n 1 21 A n 1 22 U n 1 23 G n 1 24 G n 1 25 C n 1 26 A n 1 27 C n 1 28 G n 1 29 C n 1 30 G n 1 31 A n 1 32 G n 1 33 U n 1 34 U n 1 35 U n 1 36 C n 1 37 U n 1 38 A n 1 39 C n 1 40 C n 1 41 G n 1 42 G n 1 43 G n 1 44 C n 1 45 A n 1 46 C n 1 47 C n 1 48 G n 1 49 U n 1 50 A n 1 51 A n 1 52 A n 1 53 U n 1 54 G n 1 55 U n 1 56 C n 1 57 C n 1 58 G n 1 59 A n 1 60 U n 1 61 U n 1 62 A n 1 63 U n 1 64 G n 1 65 U n 1 66 C n 1 67 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'T7 RNAP transcript' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6AP non-polymer . 9H-PURINE-2,6-DIAMINE 2,6-DIAMINOPURINE 'C5 H6 N6' 150.141 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 15 15 G GUA B . n A 1 2 G 2 16 16 G GUA B . n A 1 3 A 3 17 17 A ADE B . n A 1 4 C 4 18 18 C CYT B . n A 1 5 A 5 19 19 A ADE B . n A 1 6 U 6 20 20 U URI B . n A 1 7 A 7 21 21 A ADE B . n A 1 8 U 8 22 22 U URI B . n A 1 9 A 9 23 23 A ADE B . n A 1 10 U 10 24 24 U URI B . n A 1 11 A 11 25 25 A ADE B . n A 1 12 C 12 26 26 C CYT B . n A 1 13 G 13 27 27 G GUA B . n A 1 14 C 14 28 28 C CYT B . n A 1 15 G 15 29 29 G GUA B . n A 1 16 U 16 30 30 U URI B . n A 1 17 G 17 31 31 G GUA B . n A 1 18 G 18 32 32 G GUA B . n A 1 19 A 19 33 33 A ADE B . n A 1 20 U 20 34 34 U URI B . n A 1 21 A 21 35 35 A ADE B . n A 1 22 U 22 36 36 U URI B . n A 1 23 G 23 37 37 G GUA B . n A 1 24 G 24 38 38 G GUA B . n A 1 25 C 25 39 39 C CYT B . n A 1 26 A 26 40 40 A ADE B . n A 1 27 C 27 41 41 C CYT B . n A 1 28 G 28 42 42 G GUA B . n A 1 29 C 29 43 43 C CYT B . n A 1 30 G 30 44 44 G GUA B . n A 1 31 A 31 45 45 A ADE B . n A 1 32 G 32 46 46 G GUA B . n A 1 33 U 33 47 47 U URI B . n A 1 34 U 34 48 48 U URI B . n A 1 35 U 35 49 49 U URI B . n A 1 36 C 36 50 50 C CYT B . n A 1 37 U 37 51 51 U URI B . n A 1 38 A 38 52 52 A ADE B . n A 1 39 C 39 53 53 C CYT B . n A 1 40 C 40 54 54 C CYT B . n A 1 41 G 41 55 55 G GUA B . n A 1 42 G 42 56 56 G GUA B . n A 1 43 G 43 57 57 G GUA B . n A 1 44 C 44 58 58 C CYT B . n A 1 45 A 45 59 59 A ADE B . n A 1 46 C 46 60 60 C CYT B . n A 1 47 C 47 61 61 C CYT B . n A 1 48 G 48 62 62 G GUA B . n A 1 49 U 49 63 63 U URI B . n A 1 50 A 50 64 64 A ADE B . n A 1 51 A 51 65 65 A ADE B . n A 1 52 A 52 66 66 A ADE B . n A 1 53 U 53 67 67 U URI B . n A 1 54 G 54 68 68 G GUA B . n A 1 55 U 55 69 69 U URI B . n A 1 56 C 56 70 70 C CYT B . n A 1 57 C 57 71 71 C CYT B . n A 1 58 G 58 72 72 G GUA B . n A 1 59 A 59 73 73 A ADE B . n A 1 60 U 60 74 74 U URI B . n A 1 61 U 61 75 75 U URI B . n A 1 62 A 62 76 76 A ADE B . n A 1 63 U 63 77 77 U URI B . n A 1 64 G 64 78 78 G GUA B . n A 1 65 U 65 79 79 U URI B . n A 1 66 C 66 80 80 C CYT B . n A 1 67 C 67 81 81 C CYT B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6AP 1 101 90 6AP 6AP B . C 3 NCO 1 102 101 NCO NCO B . D 3 NCO 1 103 102 NCO NCO B . E 3 NCO 1 104 103 NCO NCO B . F 3 NCO 1 105 104 NCO NCO B . G 3 NCO 1 106 105 NCO NCO B . H 3 NCO 1 107 107 NCO NCO B . I 3 NCO 1 108 108 NCO NCO B . J 3 NCO 1 109 110 NCO NCO B . K 3 NCO 1 110 112 NCO NCO B . L 4 HOH 1 600 600 HOH HOH B . L 4 HOH 2 601 601 HOH HOH B . L 4 HOH 3 602 602 HOH HOH B . L 4 HOH 4 603 603 HOH HOH B . L 4 HOH 5 604 604 HOH HOH B . L 4 HOH 6 605 605 HOH HOH B . L 4 HOH 7 606 606 HOH HOH B . L 4 HOH 8 607 607 HOH HOH B . L 4 HOH 9 608 608 HOH HOH B . L 4 HOH 10 609 609 HOH HOH B . L 4 HOH 11 610 610 HOH HOH B . L 4 HOH 12 611 611 HOH HOH B . L 4 HOH 13 612 612 HOH HOH B . L 4 HOH 14 613 613 HOH HOH B . L 4 HOH 15 614 614 HOH HOH B . L 4 HOH 16 615 615 HOH HOH B . L 4 HOH 17 616 616 HOH HOH B . L 4 HOH 18 617 617 HOH HOH B . L 4 HOH 19 618 618 HOH HOH B . L 4 HOH 20 619 619 HOH HOH B . L 4 HOH 21 620 620 HOH HOH B . L 4 HOH 22 621 621 HOH HOH B . L 4 HOH 23 622 622 HOH HOH B . L 4 HOH 24 623 623 HOH HOH B . L 4 HOH 25 624 624 HOH HOH B . L 4 HOH 26 625 625 HOH HOH B . L 4 HOH 27 626 626 HOH HOH B . L 4 HOH 28 627 627 HOH HOH B . L 4 HOH 29 628 628 HOH HOH B . L 4 HOH 30 629 629 HOH HOH B . L 4 HOH 31 630 630 HOH HOH B . L 4 HOH 32 631 631 HOH HOH B . L 4 HOH 33 632 632 HOH HOH B . L 4 HOH 34 633 633 HOH HOH B . L 4 HOH 35 634 634 HOH HOH B . L 4 HOH 36 635 635 HOH HOH B . L 4 HOH 37 636 636 HOH HOH B . L 4 HOH 38 637 637 HOH HOH B . L 4 HOH 39 638 638 HOH HOH B . L 4 HOH 40 639 639 HOH HOH B . L 4 HOH 41 640 640 HOH HOH B . L 4 HOH 42 641 641 HOH HOH B . L 4 HOH 43 642 642 HOH HOH B . L 4 HOH 44 643 643 HOH HOH B . L 4 HOH 45 644 644 HOH HOH B . L 4 HOH 46 645 645 HOH HOH B . L 4 HOH 47 646 646 HOH HOH B . L 4 HOH 48 647 647 HOH HOH B . L 4 HOH 49 648 648 HOH HOH B . L 4 HOH 50 649 649 HOH HOH B . L 4 HOH 51 650 650 HOH HOH B . L 4 HOH 52 651 651 HOH HOH B . L 4 HOH 53 652 652 HOH HOH B . L 4 HOH 54 653 653 HOH HOH B . L 4 HOH 55 654 654 HOH HOH B . L 4 HOH 56 655 655 HOH HOH B . L 4 HOH 57 656 656 HOH HOH B . L 4 HOH 58 657 657 HOH HOH B . L 4 HOH 59 658 658 HOH HOH B . L 4 HOH 60 659 659 HOH HOH B . L 4 HOH 61 660 660 HOH HOH B . L 4 HOH 62 661 661 HOH HOH B . L 4 HOH 63 662 662 HOH HOH B . L 4 HOH 64 663 663 HOH HOH B . L 4 HOH 65 664 664 HOH HOH B . L 4 HOH 66 665 665 HOH HOH B . L 4 HOH 67 666 666 HOH HOH B . L 4 HOH 68 667 667 HOH HOH B . L 4 HOH 69 668 668 HOH HOH B . L 4 HOH 70 669 669 HOH HOH B . L 4 HOH 71 670 670 HOH HOH B . L 4 HOH 72 671 671 HOH HOH B . L 4 HOH 73 672 672 HOH HOH B . L 4 HOH 74 673 673 HOH HOH B . L 4 HOH 75 674 674 HOH HOH B . L 4 HOH 76 675 675 HOH HOH B . L 4 HOH 77 676 676 HOH HOH B . L 4 HOH 78 677 677 HOH HOH B . L 4 HOH 79 678 678 HOH HOH B . L 4 HOH 80 679 679 HOH HOH B . L 4 HOH 81 680 680 HOH HOH B . L 4 HOH 82 681 681 HOH HOH B . L 4 HOH 83 682 682 HOH HOH B . L 4 HOH 84 683 683 HOH HOH B . L 4 HOH 85 684 684 HOH HOH B . L 4 HOH 86 685 685 HOH HOH B . L 4 HOH 87 686 686 HOH HOH B . L 4 HOH 88 687 687 HOH HOH B . L 4 HOH 89 688 688 HOH HOH B . L 4 HOH 90 689 689 HOH HOH B . L 4 HOH 91 690 690 HOH HOH B . L 4 HOH 92 691 691 HOH HOH B . L 4 HOH 93 692 692 HOH HOH B . L 4 HOH 94 693 693 HOH HOH B . L 4 HOH 95 694 694 HOH HOH B . L 4 HOH 96 695 695 HOH HOH B . L 4 HOH 97 696 696 HOH HOH B . L 4 HOH 98 697 697 HOH HOH B . L 4 HOH 99 698 698 HOH HOH B . L 4 HOH 100 699 699 HOH HOH B . L 4 HOH 101 700 700 HOH HOH B . L 4 HOH 102 701 701 HOH HOH B . L 4 HOH 103 702 702 HOH HOH B . L 4 HOH 104 703 703 HOH HOH B . L 4 HOH 105 704 704 HOH HOH B . L 4 HOH 106 705 705 HOH HOH B . L 4 HOH 107 706 706 HOH HOH B . L 4 HOH 108 707 707 HOH HOH B . L 4 HOH 109 708 708 HOH HOH B . L 4 HOH 110 709 709 HOH HOH B . L 4 HOH 111 710 710 HOH HOH B . L 4 HOH 112 711 711 HOH HOH B . L 4 HOH 113 712 712 HOH HOH B . L 4 HOH 114 713 713 HOH HOH B . L 4 HOH 115 714 714 HOH HOH B . L 4 HOH 116 715 715 HOH HOH B . L 4 HOH 117 716 716 HOH HOH B . L 4 HOH 118 717 717 HOH HOH B . L 4 HOH 119 718 718 HOH HOH B . L 4 HOH 120 719 719 HOH HOH B . L 4 HOH 121 720 720 HOH HOH B . L 4 HOH 122 721 721 HOH HOH B . L 4 HOH 123 722 722 HOH HOH B . L 4 HOH 124 723 723 HOH HOH B . L 4 HOH 125 724 724 HOH HOH B . L 4 HOH 126 725 725 HOH HOH B . L 4 HOH 127 726 726 HOH HOH B . L 4 HOH 128 727 727 HOH HOH B . L 4 HOH 129 728 728 HOH HOH B . L 4 HOH 130 729 729 HOH HOH B . L 4 HOH 131 730 730 HOH HOH B . L 4 HOH 132 731 731 HOH HOH B . L 4 HOH 133 732 732 HOH HOH B . L 4 HOH 134 733 733 HOH HOH B . L 4 HOH 135 734 734 HOH HOH B . L 4 HOH 136 735 735 HOH HOH B . L 4 HOH 137 736 736 HOH HOH B . L 4 HOH 138 737 737 HOH HOH B . L 4 HOH 139 738 738 HOH HOH B . L 4 HOH 140 739 739 HOH HOH B . L 4 HOH 141 740 740 HOH HOH B . L 4 HOH 142 741 741 HOH HOH B . L 4 HOH 143 742 742 HOH HOH B . L 4 HOH 144 743 743 HOH HOH B . L 4 HOH 145 744 744 HOH HOH B . L 4 HOH 146 745 745 HOH HOH B . L 4 HOH 147 746 746 HOH HOH B . L 4 HOH 148 747 747 HOH HOH B . L 4 HOH 149 748 748 HOH HOH B . L 4 HOH 150 749 749 HOH HOH B . L 4 HOH 151 750 750 HOH HOH B . L 4 HOH 152 751 751 HOH HOH B . L 4 HOH 153 752 752 HOH HOH B . L 4 HOH 154 753 753 HOH HOH B . L 4 HOH 155 754 754 HOH HOH B . L 4 HOH 156 755 755 HOH HOH B . L 4 HOH 157 756 756 HOH HOH B . L 4 HOH 158 757 757 HOH HOH B . L 4 HOH 159 758 758 HOH HOH B . L 4 HOH 160 759 759 HOH HOH B . L 4 HOH 161 760 760 HOH HOH B . L 4 HOH 162 761 761 HOH HOH B . L 4 HOH 163 762 762 HOH HOH B . L 4 HOH 164 763 763 HOH HOH B . L 4 HOH 165 764 764 HOH HOH B . L 4 HOH 166 765 765 HOH HOH B . L 4 HOH 167 766 766 HOH HOH B . L 4 HOH 168 767 767 HOH HOH B . L 4 HOH 169 768 768 HOH HOH B . L 4 HOH 170 769 769 HOH HOH B . L 4 HOH 171 770 770 HOH HOH B . L 4 HOH 172 771 771 HOH HOH B . L 4 HOH 173 772 772 HOH HOH B . L 4 HOH 174 773 773 HOH HOH B . L 4 HOH 175 774 774 HOH HOH B . L 4 HOH 176 775 775 HOH HOH B . L 4 HOH 177 776 776 HOH HOH B . L 4 HOH 178 777 777 HOH HOH B . L 4 HOH 179 778 778 HOH HOH B . L 4 HOH 180 779 779 HOH HOH B . L 4 HOH 181 780 780 HOH HOH B . L 4 HOH 182 781 781 HOH HOH B . L 4 HOH 183 782 782 HOH HOH B . L 4 HOH 184 783 783 HOH HOH B . L 4 HOH 185 784 784 HOH HOH B . L 4 HOH 186 785 785 HOH HOH B . L 4 HOH 187 786 786 HOH HOH B . L 4 HOH 188 787 787 HOH HOH B . L 4 HOH 189 788 788 HOH HOH B . L 4 HOH 190 789 789 HOH HOH B . L 4 HOH 191 790 790 HOH HOH B . L 4 HOH 192 791 791 HOH HOH B . L 4 HOH 193 792 792 HOH HOH B . L 4 HOH 194 793 793 HOH HOH B . L 4 HOH 195 794 794 HOH HOH B . L 4 HOH 196 795 795 HOH HOH B . L 4 HOH 197 796 796 HOH HOH B . L 4 HOH 198 797 797 HOH HOH B . L 4 HOH 199 798 798 HOH HOH B . L 4 HOH 200 799 799 HOH HOH B . L 4 HOH 201 800 800 HOH HOH B . L 4 HOH 202 801 801 HOH HOH B . L 4 HOH 203 802 802 HOH HOH B . L 4 HOH 204 803 803 HOH HOH B . L 4 HOH 205 804 804 HOH HOH B . L 4 HOH 206 805 805 HOH HOH B . L 4 HOH 207 806 806 HOH HOH B . L 4 HOH 208 807 807 HOH HOH B . L 4 HOH 209 808 808 HOH HOH B . L 4 HOH 210 809 809 HOH HOH B . L 4 HOH 211 810 810 HOH HOH B . L 4 HOH 212 811 811 HOH HOH B . L 4 HOH 213 812 812 HOH HOH B . L 4 HOH 214 813 813 HOH HOH B . L 4 HOH 215 814 814 HOH HOH B . L 4 HOH 216 815 815 HOH HOH B . L 4 HOH 217 816 816 HOH HOH B . L 4 HOH 218 817 817 HOH HOH B . L 4 HOH 219 818 818 HOH HOH B . L 4 HOH 220 819 819 HOH HOH B . L 4 HOH 221 820 820 HOH HOH B . L 4 HOH 222 821 821 HOH HOH B . L 4 HOH 223 822 822 HOH HOH B . L 4 HOH 224 823 823 HOH HOH B . L 4 HOH 225 824 824 HOH HOH B . L 4 HOH 226 825 825 HOH HOH B . L 4 HOH 227 826 826 HOH HOH B . L 4 HOH 228 827 827 HOH HOH B . L 4 HOH 229 828 828 HOH HOH B . L 4 HOH 230 829 829 HOH HOH B . L 4 HOH 231 830 830 HOH HOH B . L 4 HOH 232 831 831 HOH HOH B . L 4 HOH 233 832 832 HOH HOH B . L 4 HOH 234 833 833 HOH HOH B . L 4 HOH 235 834 834 HOH HOH B . L 4 HOH 236 835 835 HOH HOH B . L 4 HOH 237 836 836 HOH HOH B . L 4 HOH 238 837 837 HOH HOH B . L 4 HOH 239 838 838 HOH HOH B . L 4 HOH 240 839 839 HOH HOH B . L 4 HOH 241 840 840 HOH HOH B . L 4 HOH 242 841 841 HOH HOH B . L 4 HOH 243 842 842 HOH HOH B . L 4 HOH 244 843 843 HOH HOH B . L 4 HOH 245 844 844 HOH HOH B . L 4 HOH 246 845 845 HOH HOH B . L 4 HOH 247 846 846 HOH HOH B . L 4 HOH 248 847 847 HOH HOH B . L 4 HOH 249 848 848 HOH HOH B . L 4 HOH 250 849 849 HOH HOH B . L 4 HOH 251 850 850 HOH HOH B . L 4 HOH 252 851 851 HOH HOH B . L 4 HOH 253 852 852 HOH HOH B . L 4 HOH 254 853 853 HOH HOH B . L 4 HOH 255 854 854 HOH HOH B . L 4 HOH 256 855 855 HOH HOH B . L 4 HOH 257 856 856 HOH HOH B . L 4 HOH 258 857 857 HOH HOH B . L 4 HOH 259 858 858 HOH HOH B . L 4 HOH 260 859 859 HOH HOH B . L 4 HOH 261 860 860 HOH HOH B . L 4 HOH 262 861 861 HOH HOH B . L 4 HOH 263 862 862 HOH HOH B . L 4 HOH 264 863 863 HOH HOH B . L 4 HOH 265 864 864 HOH HOH B . L 4 HOH 266 865 865 HOH HOH B . L 4 HOH 267 866 866 HOH HOH B . L 4 HOH 268 867 867 HOH HOH B . L 4 HOH 269 868 868 HOH HOH B . L 4 HOH 270 869 869 HOH HOH B . L 4 HOH 271 870 870 HOH HOH B . L 4 HOH 272 871 871 HOH HOH B . L 4 HOH 273 872 872 HOH HOH B . L 4 HOH 274 873 873 HOH HOH B . L 4 HOH 275 874 874 HOH HOH B . L 4 HOH 276 875 875 HOH HOH B . L 4 HOH 277 876 876 HOH HOH B . L 4 HOH 278 877 877 HOH HOH B . L 4 HOH 279 878 878 HOH HOH B . L 4 HOH 280 879 879 HOH HOH B . L 4 HOH 281 880 880 HOH HOH B . L 4 HOH 282 881 881 HOH HOH B . L 4 HOH 283 882 882 HOH HOH B . L 4 HOH 284 883 883 HOH HOH B . L 4 HOH 285 884 884 HOH HOH B . L 4 HOH 286 885 885 HOH HOH B . L 4 HOH 287 886 886 HOH HOH B . L 4 HOH 288 887 887 HOH HOH B . L 4 HOH 289 888 888 HOH HOH B . L 4 HOH 290 889 889 HOH HOH B . L 4 HOH 291 890 890 HOH HOH B . L 4 HOH 292 891 891 HOH HOH B . L 4 HOH 293 892 892 HOH HOH B . L 4 HOH 294 893 893 HOH HOH B . L 4 HOH 295 894 894 HOH HOH B . L 4 HOH 296 895 895 HOH HOH B . L 4 HOH 297 896 896 HOH HOH B . L 4 HOH 298 897 897 HOH HOH B . L 4 HOH 299 898 898 HOH HOH B . L 4 HOH 300 899 899 HOH HOH B . L 4 HOH 301 900 900 HOH HOH B . L 4 HOH 302 901 901 HOH HOH B . L 4 HOH 303 902 902 HOH HOH B . L 4 HOH 304 903 903 HOH HOH B . L 4 HOH 305 904 904 HOH HOH B . L 4 HOH 306 905 905 HOH HOH B . L 4 HOH 307 906 906 HOH HOH B . L 4 HOH 308 907 907 HOH HOH B . L 4 HOH 309 908 908 HOH HOH B . L 4 HOH 310 909 909 HOH HOH B . L 4 HOH 311 910 910 HOH HOH B . L 4 HOH 312 911 911 HOH HOH B . L 4 HOH 313 912 912 HOH HOH B . L 4 HOH 314 913 913 HOH HOH B . L 4 HOH 315 914 914 HOH HOH B . L 4 HOH 316 915 915 HOH HOH B . L 4 HOH 317 916 916 HOH HOH B . L 4 HOH 318 917 917 HOH HOH B . L 4 HOH 319 918 918 HOH HOH B . L 4 HOH 320 919 919 HOH HOH B . L 4 HOH 321 920 920 HOH HOH B . L 4 HOH 322 921 921 HOH HOH B . L 4 HOH 323 922 922 HOH HOH B . L 4 HOH 324 923 923 HOH HOH B . L 4 HOH 325 924 924 HOH HOH B . L 4 HOH 326 925 925 HOH HOH B . L 4 HOH 327 926 926 HOH HOH B . L 4 HOH 328 927 927 HOH HOH B . L 4 HOH 329 928 928 HOH HOH B . L 4 HOH 330 929 929 HOH HOH B . L 4 HOH 331 930 930 HOH HOH B . L 4 HOH 332 931 931 HOH HOH B . L 4 HOH 333 932 932 HOH HOH B . L 4 HOH 334 933 933 HOH HOH B . L 4 HOH 335 934 934 HOH HOH B . L 4 HOH 336 935 935 HOH HOH B . L 4 HOH 337 936 936 HOH HOH B . L 4 HOH 338 937 937 HOH HOH B . L 4 HOH 339 938 938 HOH HOH B . L 4 HOH 340 939 939 HOH HOH B . L 4 HOH 341 940 940 HOH HOH B . L 4 HOH 342 941 941 HOH HOH B . L 4 HOH 343 942 942 HOH HOH B . L 4 HOH 344 943 943 HOH HOH B . L 4 HOH 345 944 944 HOH HOH B . L 4 HOH 346 945 945 HOH HOH B . L 4 HOH 347 946 946 HOH HOH B . L 4 HOH 348 947 947 HOH HOH B . L 4 HOH 349 948 948 HOH HOH B . L 4 HOH 350 949 949 HOH HOH B . L 4 HOH 351 950 950 HOH HOH B . L 4 HOH 352 951 951 HOH HOH B . L 4 HOH 353 952 952 HOH HOH B . L 4 HOH 354 953 953 HOH HOH B . L 4 HOH 355 954 954 HOH HOH B . L 4 HOH 356 955 955 HOH HOH B . L 4 HOH 357 956 956 HOH HOH B . L 4 HOH 358 957 957 HOH HOH B . L 4 HOH 359 958 958 HOH HOH B . L 4 HOH 360 959 959 HOH HOH B . L 4 HOH 361 960 960 HOH HOH B . L 4 HOH 362 961 961 HOH HOH B . L 4 HOH 363 962 962 HOH HOH B . L 4 HOH 364 963 963 HOH HOH B . L 4 HOH 365 964 964 HOH HOH B . L 4 HOH 366 965 965 HOH HOH B . L 4 HOH 367 966 966 HOH HOH B . L 4 HOH 368 967 967 HOH HOH B . L 4 HOH 369 968 968 HOH HOH B . L 4 HOH 370 969 969 HOH HOH B . L 4 HOH 371 970 970 HOH HOH B . L 4 HOH 372 971 971 HOH HOH B . L 4 HOH 373 972 972 HOH HOH B . L 4 HOH 374 973 973 HOH HOH B . L 4 HOH 375 974 974 HOH HOH B . L 4 HOH 376 975 975 HOH HOH B . L 4 HOH 377 976 976 HOH HOH B . L 4 HOH 378 977 977 HOH HOH B . L 4 HOH 379 978 978 HOH HOH B . L 4 HOH 380 979 979 HOH HOH B . L 4 HOH 381 980 980 HOH HOH B . L 4 HOH 382 981 981 HOH HOH B . L 4 HOH 383 982 982 HOH HOH B . L 4 HOH 384 983 983 HOH HOH B . L 4 HOH 385 984 984 HOH HOH B . L 4 HOH 386 985 985 HOH HOH B . L 4 HOH 387 986 986 HOH HOH B . L 4 HOH 388 987 987 HOH HOH B . L 4 HOH 389 988 988 HOH HOH B . L 4 HOH 390 989 989 HOH HOH B . L 4 HOH 391 990 990 HOH HOH B . L 4 HOH 392 991 991 HOH HOH B . L 4 HOH 393 992 992 HOH HOH B . L 4 HOH 394 993 993 HOH HOH B . L 4 HOH 395 994 994 HOH HOH B . L 4 HOH 396 995 995 HOH HOH B . L 4 HOH 397 996 996 HOH HOH B . L 4 HOH 398 997 997 HOH HOH B . L 4 HOH 399 998 998 HOH HOH B . L 4 HOH 400 999 999 HOH HOH B . L 4 HOH 401 1000 1000 HOH HOH B . L 4 HOH 402 1001 1001 HOH HOH B . L 4 HOH 403 1002 1002 HOH HOH B . L 4 HOH 404 1003 1003 HOH HOH B . L 4 HOH 405 1004 1004 HOH HOH B . L 4 HOH 406 1005 1005 HOH HOH B . L 4 HOH 407 1006 1006 HOH HOH B . L 4 HOH 408 1007 1007 HOH HOH B . L 4 HOH 409 1008 1008 HOH HOH B . L 4 HOH 410 1009 1009 HOH HOH B . L 4 HOH 411 1010 1010 HOH HOH B . L 4 HOH 412 1011 1011 HOH HOH B . L 4 HOH 413 1012 1012 HOH HOH B . L 4 HOH 414 1013 1013 HOH HOH B . L 4 HOH 415 1014 1014 HOH HOH B . L 4 HOH 416 1015 1015 HOH HOH B . L 4 HOH 417 1016 1016 HOH HOH B . L 4 HOH 418 1017 1017 HOH HOH B . L 4 HOH 419 1018 1018 HOH HOH B . L 4 HOH 420 1019 1019 HOH HOH B . L 4 HOH 421 1020 1020 HOH HOH B . L 4 HOH 422 1021 1021 HOH HOH B . L 4 HOH 423 1022 1022 HOH HOH B . L 4 HOH 424 1023 1023 HOH HOH B . L 4 HOH 425 1024 1024 HOH HOH B . L 4 HOH 426 1025 1025 HOH HOH B . L 4 HOH 427 1026 1026 HOH HOH B . L 4 HOH 428 1027 1027 HOH HOH B . L 4 HOH 429 1028 1028 HOH HOH B . L 4 HOH 430 1029 1029 HOH HOH B . L 4 HOH 431 1030 1030 HOH HOH B . L 4 HOH 432 1031 1031 HOH HOH B . L 4 HOH 433 1032 1032 HOH HOH B . L 4 HOH 434 1033 1033 HOH HOH B . L 4 HOH 435 1034 1034 HOH HOH B . L 4 HOH 436 1035 1035 HOH HOH B . L 4 HOH 437 1036 1036 HOH HOH B . L 4 HOH 438 1037 1037 HOH HOH B . L 4 HOH 439 1038 1038 HOH HOH B . L 4 HOH 440 1039 1039 HOH HOH B . L 4 HOH 441 1040 1040 HOH HOH B . L 4 HOH 442 1041 1041 HOH HOH B . L 4 HOH 443 1042 1042 HOH HOH B . L 4 HOH 444 1043 1043 HOH HOH B . L 4 HOH 445 1044 1044 HOH HOH B . L 4 HOH 446 1045 1045 HOH HOH B . L 4 HOH 447 1046 1046 HOH HOH B . L 4 HOH 448 1047 1047 HOH HOH B . L 4 HOH 449 1048 1048 HOH HOH B . L 4 HOH 450 1049 1049 HOH HOH B . L 4 HOH 451 1050 1050 HOH HOH B . L 4 HOH 452 1051 1051 HOH HOH B . L 4 HOH 453 1052 1052 HOH HOH B . L 4 HOH 454 1053 1053 HOH HOH B . L 4 HOH 455 1054 1054 HOH HOH B . L 4 HOH 456 1055 1055 HOH HOH B . L 4 HOH 457 1056 1056 HOH HOH B . L 4 HOH 458 1057 1057 HOH HOH B . L 4 HOH 459 1058 1058 HOH HOH B . L 4 HOH 460 1059 1059 HOH HOH B . L 4 HOH 461 1060 1060 HOH HOH B . L 4 HOH 462 1061 1061 HOH HOH B . L 4 HOH 463 1062 1062 HOH HOH B . L 4 HOH 464 1063 1063 HOH HOH B . L 4 HOH 465 1064 1064 HOH HOH B . L 4 HOH 466 1065 1065 HOH HOH B . L 4 HOH 467 1066 1066 HOH HOH B . L 4 HOH 468 1067 1067 HOH HOH B . L 4 HOH 469 1068 1068 HOH HOH B . L 4 HOH 470 1069 1069 HOH HOH B . L 4 HOH 471 1070 1070 HOH HOH B . L 4 HOH 472 1071 1071 HOH HOH B . L 4 HOH 473 1072 1072 HOH HOH B . L 4 HOH 474 1073 1073 HOH HOH B . L 4 HOH 475 1074 1074 HOH HOH B . L 4 HOH 476 1075 1075 HOH HOH B . L 4 HOH 477 1076 1076 HOH HOH B . L 4 HOH 478 1077 1077 HOH HOH B . L 4 HOH 479 1078 1078 HOH HOH B . L 4 HOH 480 1079 1079 HOH HOH B . L 4 HOH 481 1080 1080 HOH HOH B . L 4 HOH 482 1081 1081 HOH HOH B . L 4 HOH 483 1082 1082 HOH HOH B . L 4 HOH 484 1083 1083 HOH HOH B . L 4 HOH 485 1084 1084 HOH HOH B . L 4 HOH 486 1085 1085 HOH HOH B . L 4 HOH 487 1086 1086 HOH HOH B . L 4 HOH 488 1087 1087 HOH HOH B . L 4 HOH 489 1088 1088 HOH HOH B . L 4 HOH 490 1089 1089 HOH HOH B . L 4 HOH 491 1090 1090 HOH HOH B . L 4 HOH 492 1091 1091 HOH HOH B . L 4 HOH 493 1092 1092 HOH HOH B . L 4 HOH 494 1093 1093 HOH HOH B . L 4 HOH 495 1094 1094 HOH HOH B . L 4 HOH 496 1095 1095 HOH HOH B . L 4 HOH 497 1096 1096 HOH HOH B . L 4 HOH 498 1097 1097 HOH HOH B . L 4 HOH 499 1098 1098 HOH HOH B . L 4 HOH 500 1099 1099 HOH HOH B . L 4 HOH 501 1100 1100 HOH HOH B . L 4 HOH 502 1101 1101 HOH HOH B . L 4 HOH 503 1102 1102 HOH HOH B . L 4 HOH 504 1103 1103 HOH HOH B . L 4 HOH 505 1104 1104 HOH HOH B . L 4 HOH 506 1105 1105 HOH HOH B . L 4 HOH 507 1106 1106 HOH HOH B . L 4 HOH 508 1107 1107 HOH HOH B . L 4 HOH 509 1108 1108 HOH HOH B . L 4 HOH 510 1109 1109 HOH HOH B . L 4 HOH 511 1110 1110 HOH HOH B . L 4 HOH 512 1111 1111 HOH HOH B . L 4 HOH 513 1112 1112 HOH HOH B . L 4 HOH 514 1113 1113 HOH HOH B . L 4 HOH 515 1114 1114 HOH HOH B . L 4 HOH 516 1115 1115 HOH HOH B . L 4 HOH 517 1116 1116 HOH HOH B . L 4 HOH 518 1117 1117 HOH HOH B . L 4 HOH 519 1118 1118 HOH HOH B . L 4 HOH 520 1119 1119 HOH HOH B . L 4 HOH 521 1120 1120 HOH HOH B . L 4 HOH 522 1121 1121 HOH HOH B . L 4 HOH 523 1122 1122 HOH HOH B . L 4 HOH 524 1123 1123 HOH HOH B . L 4 HOH 525 1124 1124 HOH HOH B . L 4 HOH 526 1125 1125 HOH HOH B . L 4 HOH 527 1126 1126 HOH HOH B . L 4 HOH 528 1127 1127 HOH HOH B . L 4 HOH 529 1128 1128 HOH HOH B . L 4 HOH 530 1129 1129 HOH HOH B . L 4 HOH 531 1130 1130 HOH HOH B . L 4 HOH 532 1131 1131 HOH HOH B . L 4 HOH 533 1132 1132 HOH HOH B . L 4 HOH 534 1133 1133 HOH HOH B . L 4 HOH 535 1134 1134 HOH HOH B . L 4 HOH 536 1135 1135 HOH HOH B . L 4 HOH 537 1136 1136 HOH HOH B . L 4 HOH 538 1137 1137 HOH HOH B . L 4 HOH 539 1138 1138 HOH HOH B . L 4 HOH 540 1139 1139 HOH HOH B . L 4 HOH 541 1140 1140 HOH HOH B . L 4 HOH 542 1141 1141 HOH HOH B . L 4 HOH 543 1142 1142 HOH HOH B . L 4 HOH 544 1143 1143 HOH HOH B . L 4 HOH 545 1144 1144 HOH HOH B . L 4 HOH 546 1145 1145 HOH HOH B . L 4 HOH 547 1146 1146 HOH HOH B . L 4 HOH 548 1147 1147 HOH HOH B . L 4 HOH 549 1148 1148 HOH HOH B . L 4 HOH 550 1149 1149 HOH HOH B . L 4 HOH 551 1150 1150 HOH HOH B . L 4 HOH 552 1151 1151 HOH HOH B . L 4 HOH 553 1152 1152 HOH HOH B . L 4 HOH 554 1153 1153 HOH HOH B . L 4 HOH 555 1154 1154 HOH HOH B . L 4 HOH 556 1155 1155 HOH HOH B . L 4 HOH 557 1156 1156 HOH HOH B . L 4 HOH 558 1157 1157 HOH HOH B . L 4 HOH 559 1158 1158 HOH HOH B . L 4 HOH 560 1159 1159 HOH HOH B . L 4 HOH 561 1160 1160 HOH HOH B . L 4 HOH 562 1161 1161 HOH HOH B . L 4 HOH 563 1162 1162 HOH HOH B . L 4 HOH 564 1163 1163 HOH HOH B . L 4 HOH 565 1164 1164 HOH HOH B . L 4 HOH 566 1165 1165 HOH HOH B . L 4 HOH 567 1166 1166 HOH HOH B . L 4 HOH 568 1167 1167 HOH HOH B . L 4 HOH 569 1168 1168 HOH HOH B . L 4 HOH 570 1169 1169 HOH HOH B . L 4 HOH 571 1170 1170 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 CNS refinement . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # _cell.entry_id 4FEP _cell.length_a 133.071 _cell.length_b 35.252 _cell.length_c 41.855 _cell.angle_alpha 90.00 _cell.angle_beta 91.40 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4FEP _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4FEP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_percent_sol 46.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2009-06-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 4FEP _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 40 _reflns.d_resolution_high 1.65 _reflns.number_obs 22255 _reflns.number_all 23255 _reflns.percent_possible_obs 95.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.65 _reflns_shell.d_res_low 1.68 _reflns_shell.percent_possible_all 65.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4FEP _refine.ls_number_reflns_obs 20703 _refine.ls_number_reflns_all 23255 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40 _refine.ls_d_res_high 1.65 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.179 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.179 _refine.ls_R_factor_R_free 0.229 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 2059 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4FEP _refine_analyze.Luzzati_coordinate_error_obs 0.18 _refine_analyze.Luzzati_sigma_a_obs 0.18 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1423 _refine_hist.pdbx_number_atoms_ligand 74 _refine_hist.number_atoms_solvent 571 _refine_hist.number_atoms_total 2068 _refine_hist.d_res_high 1.65 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_angle_deg 0.724 ? ? ? ? 'X-RAY DIFFRACTION' c_bond_d 0.003 ? ? ? ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4FEP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4FEP _struct.title 'Crystal structure of the A24U/U25A/A46G/C74U mutant xpt-pbuX guanine riboswitch aptamer domain in complex with 2,6-diaminopurine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FEP _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'three-way junction with distal tertiary interaction, genetic regulatory element, 2, 6-diaminopurine, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4FEP _struct_ref.pdbx_db_accession 4FEP _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4FEP _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 67 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4FEP _struct_ref_seq.db_align_beg 15 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 81 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 15 _struct_ref_seq.pdbx_auth_seq_align_end 81 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 67 N3 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 67 O2 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 67 N4 ? ? B G 15 B C 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 66 N3 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 66 O2 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 66 N4 ? ? B G 16 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 65 N3 ? ? B A 17 B U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 65 O4 ? ? B A 17 B U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 64 N1 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 64 O6 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 64 N2 ? ? B C 18 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 63 N3 ? ? B A 19 B U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 63 O4 ? ? B A 19 B U 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 62 N1 ? ? B U 20 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 62 N6 ? ? B U 20 B A 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 7 N1 ? ? ? 1_555 A U 61 N3 ? ? B A 21 B U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 7 N6 ? ? ? 1_555 A U 61 O4 ? ? B A 21 B U 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 8 O4 ? ? ? 1_555 A G 32 N1 ? ? B U 22 B G 46 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog19 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 38 N1 ? ? B U 22 B A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 38 N6 ? ? B U 22 B A 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A A 9 N1 ? ? ? 1_555 A G 32 N2 ? ? B A 23 B G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog22 hydrog ? ? A A 9 N6 ? ? ? 1_555 A G 32 N3 ? ? B A 23 B G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog23 hydrog ? ? A A 11 N6 ? ? ? 1_555 A A 31 N3 ? ? B A 25 B A 45 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog24 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 30 N1 ? ? B C 26 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 30 O6 ? ? B C 26 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 30 N2 ? ? B C 26 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 29 N3 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 29 O2 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 29 N4 ? ? B G 27 B C 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 28 N1 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 28 O6 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 28 N2 ? ? B C 28 B G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 27 N3 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 27 O2 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 27 N4 ? ? B G 29 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 26 N1 ? ? B U 30 B A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 26 N6 ? ? B U 30 B A 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 25 N3 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 25 O2 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 25 N4 ? ? B G 31 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A A 19 N1 ? ? ? 1_555 A A 52 N6 ? ? B A 33 B A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog42 hydrog ? ? A A 19 N6 ? ? ? 1_555 A A 52 N7 ? ? B A 33 B A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog43 hydrog ? ? A U 20 O2 ? ? ? 1_555 A G 23 N2 ? ? B U 34 B G 37 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog44 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 51 N7 ? ? B U 34 B A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog45 hydrog ? ? A U 20 O2 ? ? ? 1_555 A A 51 N6 ? ? B U 34 B A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog46 hydrog ? ? A A 21 N6 ? ? ? 1_555 A A 50 N1 ? ? B A 35 B A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog47 hydrog ? ? A A 21 N7 ? ? ? 1_555 A A 50 N6 ? ? B A 35 B A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog48 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 47 N3 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 47 O2 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 47 N4 ? ? B G 37 B C 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 46 N3 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 46 O2 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 46 N4 ? ? B G 38 B C 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 24 N2 ? ? ? 1_555 A A 52 N1 ? ? B G 38 B A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog55 hydrog ? ? A G 24 N3 ? ? ? 1_555 A A 52 N6 ? ? B G 38 B A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog56 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 39 N3 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 39 O2 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 39 N4 ? ? B G 46 B C 53 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 33 N3 ? ? ? 1_555 A U 37 O4 ? ? B U 47 B U 51 1_555 ? ? ? ? ? ? 'U-U MISPAIR' ? ? ? hydrog60 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 62 N3 ? ? B U 49 B A 76 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog61 hydrog ? ? A C 36 N4 ? ? ? 1_555 A U 61 O2 ? ? B C 50 B U 75 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog62 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 58 N1 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 58 O6 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 58 N2 ? ? B C 54 B G 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 57 N3 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 57 O2 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 57 N4 ? ? B G 55 B C 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 56 N3 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 56 O2 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 56 N4 ? ? B G 56 B C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A G 43 N1 ? ? ? 1_555 A U 55 O2 ? ? B G 57 B U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? A G 43 O6 ? ? ? 1_555 A U 55 N3 ? ? B G 57 B U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog73 hydrog ? ? A C 44 N3 ? ? ? 1_555 A G 54 N1 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 44 N4 ? ? ? 1_555 A G 54 O6 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 44 O2 ? ? ? 1_555 A G 54 N2 ? ? B C 58 B G 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 53 N3 ? ? B A 59 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 53 O4 ? ? B A 59 B U 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 47 O2 ? ? ? 1_555 A A 51 N6 ? ? B C 61 B A 65 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog79 hydrog ? ? A G 48 N2 ? ? ? 1_555 A U 49 O4 ? ? B G 62 B U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B 6AP 101 ? 9 'BINDING SITE FOR RESIDUE 6AP B 101' AC2 Software B NCO 102 ? 12 'BINDING SITE FOR RESIDUE NCO B 102' AC3 Software B NCO 103 ? 10 'BINDING SITE FOR RESIDUE NCO B 103' AC4 Software B NCO 104 ? 9 'BINDING SITE FOR RESIDUE NCO B 104' AC5 Software B NCO 105 ? 9 'BINDING SITE FOR RESIDUE NCO B 105' AC6 Software B NCO 106 ? 7 'BINDING SITE FOR RESIDUE NCO B 106' AC7 Software B NCO 107 ? 9 'BINDING SITE FOR RESIDUE NCO B 107' AC8 Software B NCO 108 ? 10 'BINDING SITE FOR RESIDUE NCO B 108' AC9 Software B NCO 109 ? 3 'BINDING SITE FOR RESIDUE NCO B 109' BC1 Software B NCO 110 ? 6 'BINDING SITE FOR RESIDUE NCO B 110' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 A A 7 ? A B 21 . ? 1_555 ? 2 AC1 9 U A 8 ? U B 22 . ? 1_555 ? 3 AC1 9 U A 33 ? U B 47 . ? 1_555 ? 4 AC1 9 U A 37 ? U B 51 . ? 1_555 ? 5 AC1 9 A A 38 ? A B 52 . ? 1_555 ? 6 AC1 9 A A 59 ? A B 73 . ? 1_555 ? 7 AC1 9 U A 60 ? U B 74 . ? 1_555 ? 8 AC1 9 U A 61 ? U B 75 . ? 1_555 ? 9 AC1 9 HOH L . ? HOH B 667 . ? 1_555 ? 10 AC2 12 G A 15 ? G B 29 . ? 4_545 ? 11 AC2 12 U A 16 ? U B 30 . ? 4_545 ? 12 AC2 12 A A 52 ? A B 66 . ? 1_555 ? 13 AC2 12 U A 53 ? U B 67 . ? 1_555 ? 14 AC2 12 HOH L . ? HOH B 655 . ? 1_555 ? 15 AC2 12 HOH L . ? HOH B 677 . ? 1_555 ? 16 AC2 12 HOH L . ? HOH B 688 . ? 4_545 ? 17 AC2 12 HOH L . ? HOH B 850 . ? 1_555 ? 18 AC2 12 HOH L . ? HOH B 856 . ? 1_555 ? 19 AC2 12 HOH L . ? HOH B 982 . ? 1_555 ? 20 AC2 12 HOH L . ? HOH B 1030 . ? 4_555 ? 21 AC2 12 HOH L . ? HOH B 1031 . ? 1_555 ? 22 AC3 10 G A 24 ? G B 38 . ? 1_555 ? 23 AC3 10 G A 42 ? G B 56 . ? 1_555 ? 24 AC3 10 G A 43 ? G B 57 . ? 4_556 ? 25 AC3 10 C A 44 ? C B 58 . ? 4_556 ? 26 AC3 10 HOH L . ? HOH B 658 . ? 1_555 ? 27 AC3 10 HOH L . ? HOH B 756 . ? 1_555 ? 28 AC3 10 HOH L . ? HOH B 848 . ? 1_555 ? 29 AC3 10 HOH L . ? HOH B 927 . ? 1_555 ? 30 AC3 10 HOH L . ? HOH B 998 . ? 1_555 ? 31 AC3 10 HOH L . ? HOH B 1025 . ? 1_555 ? 32 AC4 9 C A 25 ? C B 39 . ? 1_555 ? 33 AC4 9 G A 41 ? G B 55 . ? 1_555 ? 34 AC4 9 G A 42 ? G B 56 . ? 1_555 ? 35 AC4 9 G A 43 ? G B 57 . ? 1_555 ? 36 AC4 9 G A 54 ? G B 68 . ? 1_555 ? 37 AC4 9 U A 55 ? U B 69 . ? 1_555 ? 38 AC4 9 HOH L . ? HOH B 697 . ? 1_555 ? 39 AC4 9 HOH L . ? HOH B 763 . ? 1_555 ? 40 AC4 9 HOH L . ? HOH B 1135 . ? 1_555 ? 41 AC5 9 U A 16 ? U B 30 . ? 1_555 ? 42 AC5 9 G A 17 ? G B 31 . ? 1_555 ? 43 AC5 9 G A 18 ? G B 32 . ? 1_555 ? 44 AC5 9 A A 51 ? A B 65 . ? 1_555 ? 45 AC5 9 A A 52 ? A B 66 . ? 1_555 ? 46 AC5 9 HOH L . ? HOH B 607 . ? 1_555 ? 47 AC5 9 HOH L . ? HOH B 638 . ? 1_555 ? 48 AC5 9 HOH L . ? HOH B 641 . ? 1_555 ? 49 AC5 9 HOH L . ? HOH B 727 . ? 1_555 ? 50 AC6 7 G A 23 ? G B 37 . ? 1_555 ? 51 AC6 7 G A 24 ? G B 38 . ? 1_555 ? 52 AC6 7 HOH L . ? HOH B 629 . ? 1_555 ? 53 AC6 7 HOH L . ? HOH B 715 . ? 1_555 ? 54 AC6 7 HOH L . ? HOH B 953 . ? 4_546 ? 55 AC6 7 HOH L . ? HOH B 1132 . ? 1_555 ? 56 AC6 7 HOH L . ? HOH B 1148 . ? 4_546 ? 57 AC7 9 C A 27 ? C B 41 . ? 1_555 ? 58 AC7 9 G A 28 ? G B 42 . ? 1_555 ? 59 AC7 9 C A 39 ? C B 53 . ? 1_555 ? 60 AC7 9 C A 40 ? C B 54 . ? 1_555 ? 61 AC7 9 HOH L . ? HOH B 614 . ? 1_555 ? 62 AC7 9 HOH L . ? HOH B 674 . ? 1_555 ? 63 AC7 9 HOH L . ? HOH B 858 . ? 1_555 ? 64 AC7 9 HOH L . ? HOH B 881 . ? 1_555 ? 65 AC7 9 HOH L . ? HOH B 1023 . ? 1_555 ? 66 AC8 10 A A 31 ? A B 45 . ? 1_555 ? 67 AC8 10 G A 32 ? G B 46 . ? 1_555 ? 68 AC8 10 U A 33 ? U B 47 . ? 1_555 ? 69 AC8 10 HOH L . ? HOH B 676 . ? 1_555 ? 70 AC8 10 HOH L . ? HOH B 721 . ? 1_555 ? 71 AC8 10 HOH L . ? HOH B 754 . ? 1_555 ? 72 AC8 10 HOH L . ? HOH B 894 . ? 1_555 ? 73 AC8 10 HOH L . ? HOH B 1004 . ? 1_555 ? 74 AC8 10 HOH L . ? HOH B 1059 . ? 1_555 ? 75 AC8 10 HOH L . ? HOH B 1157 . ? 1_555 ? 76 AC9 3 A A 7 ? A B 21 . ? 1_555 ? 77 AC9 3 U A 8 ? U B 22 . ? 1_555 ? 78 AC9 3 HOH L . ? HOH B 1130 . ? 1_555 ? 79 BC1 6 U A 22 ? U B 36 . ? 4_546 ? 80 BC1 6 G A 28 ? G B 42 . ? 1_545 ? 81 BC1 6 C A 29 ? C B 43 . ? 1_545 ? 82 BC1 6 G A 58 ? G B 72 . ? 1_555 ? 83 BC1 6 A A 59 ? A B 73 . ? 1_555 ? 84 BC1 6 HOH L . ? HOH B 875 . ? 1_555 ? # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id G _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 38 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.053 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 6AP N9 N Y N 1 6AP C8 C Y N 2 6AP N7 N Y N 3 6AP C5 C Y N 4 6AP C4 C Y N 5 6AP N3 N Y N 6 6AP C2 C Y N 7 6AP N2 N N N 8 6AP N1 N Y N 9 6AP C6 C Y N 10 6AP N6 N N N 11 6AP HN9 H N N 12 6AP H8 H N N 13 6AP HN21 H N N 14 6AP HN22 H N N 15 6AP HN61 H N N 16 6AP HN62 H N N 17 A OP3 O N N 18 A P P N N 19 A OP1 O N N 20 A OP2 O N N 21 A "O5'" O N N 22 A "C5'" C N N 23 A "C4'" C N R 24 A "O4'" O N N 25 A "C3'" C N S 26 A "O3'" O N N 27 A "C2'" C N R 28 A "O2'" O N N 29 A "C1'" C N R 30 A N9 N Y N 31 A C8 C Y N 32 A N7 N Y N 33 A C5 C Y N 34 A C6 C Y N 35 A N6 N N N 36 A N1 N Y N 37 A C2 C Y N 38 A N3 N Y N 39 A C4 C Y N 40 A HOP3 H N N 41 A HOP2 H N N 42 A "H5'" H N N 43 A "H5''" H N N 44 A "H4'" H N N 45 A "H3'" H N N 46 A "HO3'" H N N 47 A "H2'" H N N 48 A "HO2'" H N N 49 A "H1'" H N N 50 A H8 H N N 51 A H61 H N N 52 A H62 H N N 53 A H2 H N N 54 C OP3 O N N 55 C P P N N 56 C OP1 O N N 57 C OP2 O N N 58 C "O5'" O N N 59 C "C5'" C N N 60 C "C4'" C N R 61 C "O4'" O N N 62 C "C3'" C N S 63 C "O3'" O N N 64 C "C2'" C N R 65 C "O2'" O N N 66 C "C1'" C N R 67 C N1 N N N 68 C C2 C N N 69 C O2 O N N 70 C N3 N N N 71 C C4 C N N 72 C N4 N N N 73 C C5 C N N 74 C C6 C N N 75 C HOP3 H N N 76 C HOP2 H N N 77 C "H5'" H N N 78 C "H5''" H N N 79 C "H4'" H N N 80 C "H3'" H N N 81 C "HO3'" H N N 82 C "H2'" H N N 83 C "HO2'" H N N 84 C "H1'" H N N 85 C H41 H N N 86 C H42 H N N 87 C H5 H N N 88 C H6 H N N 89 G OP3 O N N 90 G P P N N 91 G OP1 O N N 92 G OP2 O N N 93 G "O5'" O N N 94 G "C5'" C N N 95 G "C4'" C N R 96 G "O4'" O N N 97 G "C3'" C N S 98 G "O3'" O N N 99 G "C2'" C N R 100 G "O2'" O N N 101 G "C1'" C N R 102 G N9 N Y N 103 G C8 C Y N 104 G N7 N Y N 105 G C5 C Y N 106 G C6 C N N 107 G O6 O N N 108 G N1 N N N 109 G C2 C N N 110 G N2 N N N 111 G N3 N N N 112 G C4 C Y N 113 G HOP3 H N N 114 G HOP2 H N N 115 G "H5'" H N N 116 G "H5''" H N N 117 G "H4'" H N N 118 G "H3'" H N N 119 G "HO3'" H N N 120 G "H2'" H N N 121 G "HO2'" H N N 122 G "H1'" H N N 123 G H8 H N N 124 G H1 H N N 125 G H21 H N N 126 G H22 H N N 127 HOH O O N N 128 HOH H1 H N N 129 HOH H2 H N N 130 NCO CO CO N N 131 NCO N1 N N N 132 NCO N2 N N N 133 NCO N3 N N N 134 NCO N4 N N N 135 NCO N5 N N N 136 NCO N6 N N N 137 NCO HN11 H N N 138 NCO HN12 H N N 139 NCO HN13 H N N 140 NCO HN21 H N N 141 NCO HN22 H N N 142 NCO HN23 H N N 143 NCO HN31 H N N 144 NCO HN32 H N N 145 NCO HN33 H N N 146 NCO HN41 H N N 147 NCO HN42 H N N 148 NCO HN43 H N N 149 NCO HN51 H N N 150 NCO HN52 H N N 151 NCO HN53 H N N 152 NCO HN61 H N N 153 NCO HN62 H N N 154 NCO HN63 H N N 155 U OP3 O N N 156 U P P N N 157 U OP1 O N N 158 U OP2 O N N 159 U "O5'" O N N 160 U "C5'" C N N 161 U "C4'" C N R 162 U "O4'" O N N 163 U "C3'" C N S 164 U "O3'" O N N 165 U "C2'" C N R 166 U "O2'" O N N 167 U "C1'" C N R 168 U N1 N N N 169 U C2 C N N 170 U O2 O N N 171 U N3 N N N 172 U C4 C N N 173 U O4 O N N 174 U C5 C N N 175 U C6 C N N 176 U HOP3 H N N 177 U HOP2 H N N 178 U "H5'" H N N 179 U "H5''" H N N 180 U "H4'" H N N 181 U "H3'" H N N 182 U "HO3'" H N N 183 U "H2'" H N N 184 U "HO2'" H N N 185 U "H1'" H N N 186 U H3 H N N 187 U H5 H N N 188 U H6 H N N 189 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6AP N9 C8 sing Y N 1 6AP N9 C4 sing Y N 2 6AP N9 HN9 sing N N 3 6AP C8 N7 doub Y N 4 6AP C8 H8 sing N N 5 6AP N7 C5 sing Y N 6 6AP C5 C4 sing Y N 7 6AP C5 C6 doub Y N 8 6AP C4 N3 doub Y N 9 6AP N3 C2 sing Y N 10 6AP C2 N2 sing N N 11 6AP C2 N1 doub Y N 12 6AP N2 HN21 sing N N 13 6AP N2 HN22 sing N N 14 6AP N1 C6 sing Y N 15 6AP C6 N6 sing N N 16 6AP N6 HN61 sing N N 17 6AP N6 HN62 sing N N 18 A OP3 P sing N N 19 A OP3 HOP3 sing N N 20 A P OP1 doub N N 21 A P OP2 sing N N 22 A P "O5'" sing N N 23 A OP2 HOP2 sing N N 24 A "O5'" "C5'" sing N N 25 A "C5'" "C4'" sing N N 26 A "C5'" "H5'" sing N N 27 A "C5'" "H5''" sing N N 28 A "C4'" "O4'" sing N N 29 A "C4'" "C3'" sing N N 30 A "C4'" "H4'" sing N N 31 A "O4'" "C1'" sing N N 32 A "C3'" "O3'" sing N N 33 A "C3'" "C2'" sing N N 34 A "C3'" "H3'" sing N N 35 A "O3'" "HO3'" sing N N 36 A "C2'" "O2'" sing N N 37 A "C2'" "C1'" sing N N 38 A "C2'" "H2'" sing N N 39 A "O2'" "HO2'" sing N N 40 A "C1'" N9 sing N N 41 A "C1'" "H1'" sing N N 42 A N9 C8 sing Y N 43 A N9 C4 sing Y N 44 A C8 N7 doub Y N 45 A C8 H8 sing N N 46 A N7 C5 sing Y N 47 A C5 C6 sing Y N 48 A C5 C4 doub Y N 49 A C6 N6 sing N N 50 A C6 N1 doub Y N 51 A N6 H61 sing N N 52 A N6 H62 sing N N 53 A N1 C2 sing Y N 54 A C2 N3 doub Y N 55 A C2 H2 sing N N 56 A N3 C4 sing Y N 57 C OP3 P sing N N 58 C OP3 HOP3 sing N N 59 C P OP1 doub N N 60 C P OP2 sing N N 61 C P "O5'" sing N N 62 C OP2 HOP2 sing N N 63 C "O5'" "C5'" sing N N 64 C "C5'" "C4'" sing N N 65 C "C5'" "H5'" sing N N 66 C "C5'" "H5''" sing N N 67 C "C4'" "O4'" sing N N 68 C "C4'" "C3'" sing N N 69 C "C4'" "H4'" sing N N 70 C "O4'" "C1'" sing N N 71 C "C3'" "O3'" sing N N 72 C "C3'" "C2'" sing N N 73 C "C3'" "H3'" sing N N 74 C "O3'" "HO3'" sing N N 75 C "C2'" "O2'" sing N N 76 C "C2'" "C1'" sing N N 77 C "C2'" "H2'" sing N N 78 C "O2'" "HO2'" sing N N 79 C "C1'" N1 sing N N 80 C "C1'" "H1'" sing N N 81 C N1 C2 sing N N 82 C N1 C6 sing N N 83 C C2 O2 doub N N 84 C C2 N3 sing N N 85 C N3 C4 doub N N 86 C C4 N4 sing N N 87 C C4 C5 sing N N 88 C N4 H41 sing N N 89 C N4 H42 sing N N 90 C C5 C6 doub N N 91 C C5 H5 sing N N 92 C C6 H6 sing N N 93 G OP3 P sing N N 94 G OP3 HOP3 sing N N 95 G P OP1 doub N N 96 G P OP2 sing N N 97 G P "O5'" sing N N 98 G OP2 HOP2 sing N N 99 G "O5'" "C5'" sing N N 100 G "C5'" "C4'" sing N N 101 G "C5'" "H5'" sing N N 102 G "C5'" "H5''" sing N N 103 G "C4'" "O4'" sing N N 104 G "C4'" "C3'" sing N N 105 G "C4'" "H4'" sing N N 106 G "O4'" "C1'" sing N N 107 G "C3'" "O3'" sing N N 108 G "C3'" "C2'" sing N N 109 G "C3'" "H3'" sing N N 110 G "O3'" "HO3'" sing N N 111 G "C2'" "O2'" sing N N 112 G "C2'" "C1'" sing N N 113 G "C2'" "H2'" sing N N 114 G "O2'" "HO2'" sing N N 115 G "C1'" N9 sing N N 116 G "C1'" "H1'" sing N N 117 G N9 C8 sing Y N 118 G N9 C4 sing Y N 119 G C8 N7 doub Y N 120 G C8 H8 sing N N 121 G N7 C5 sing Y N 122 G C5 C6 sing N N 123 G C5 C4 doub Y N 124 G C6 O6 doub N N 125 G C6 N1 sing N N 126 G N1 C2 sing N N 127 G N1 H1 sing N N 128 G C2 N2 sing N N 129 G C2 N3 doub N N 130 G N2 H21 sing N N 131 G N2 H22 sing N N 132 G N3 C4 sing N N 133 HOH O H1 sing N N 134 HOH O H2 sing N N 135 NCO CO N1 sing N N 136 NCO CO N2 sing N N 137 NCO CO N3 sing N N 138 NCO CO N4 sing N N 139 NCO CO N5 sing N N 140 NCO CO N6 sing N N 141 NCO N1 HN11 sing N N 142 NCO N1 HN12 sing N N 143 NCO N1 HN13 sing N N 144 NCO N2 HN21 sing N N 145 NCO N2 HN22 sing N N 146 NCO N2 HN23 sing N N 147 NCO N3 HN31 sing N N 148 NCO N3 HN32 sing N N 149 NCO N3 HN33 sing N N 150 NCO N4 HN41 sing N N 151 NCO N4 HN42 sing N N 152 NCO N4 HN43 sing N N 153 NCO N5 HN51 sing N N 154 NCO N5 HN52 sing N N 155 NCO N5 HN53 sing N N 156 NCO N6 HN61 sing N N 157 NCO N6 HN62 sing N N 158 NCO N6 HN63 sing N N 159 U OP3 P sing N N 160 U OP3 HOP3 sing N N 161 U P OP1 doub N N 162 U P OP2 sing N N 163 U P "O5'" sing N N 164 U OP2 HOP2 sing N N 165 U "O5'" "C5'" sing N N 166 U "C5'" "C4'" sing N N 167 U "C5'" "H5'" sing N N 168 U "C5'" "H5''" sing N N 169 U "C4'" "O4'" sing N N 170 U "C4'" "C3'" sing N N 171 U "C4'" "H4'" sing N N 172 U "O4'" "C1'" sing N N 173 U "C3'" "O3'" sing N N 174 U "C3'" "C2'" sing N N 175 U "C3'" "H3'" sing N N 176 U "O3'" "HO3'" sing N N 177 U "C2'" "O2'" sing N N 178 U "C2'" "C1'" sing N N 179 U "C2'" "H2'" sing N N 180 U "O2'" "HO2'" sing N N 181 U "C1'" N1 sing N N 182 U "C1'" "H1'" sing N N 183 U N1 C2 sing N N 184 U N1 C6 sing N N 185 U C2 O2 doub N N 186 U C2 N3 sing N N 187 U N3 C4 sing N N 188 U N3 H3 sing N N 189 U C4 O4 doub N N 190 U C4 C5 sing N N 191 U C5 C6 doub N N 192 U C5 H5 sing N N 193 U C6 H6 sing N N 194 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4FEP 'double helix' 4FEP 'a-form double helix' 4FEP 'mismatched base pair' 4FEP 'internal loop' 4FEP 'triple helix' 4FEP 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 67 1_555 -0.291 -0.033 0.390 -0.592 -19.745 -5.578 1 B_G15:C81_B B 15 ? B 81 ? 19 1 1 A G 2 1_555 A C 66 1_555 -0.204 -0.228 0.187 -3.387 -15.658 1.282 2 B_G16:C80_B B 16 ? B 80 ? 19 1 1 A A 3 1_555 A U 65 1_555 0.149 -0.038 0.156 -0.046 -14.735 2.188 3 B_A17:U79_B B 17 ? B 79 ? 20 1 1 A C 4 1_555 A G 64 1_555 -0.230 -0.154 -0.069 2.973 -14.865 1.601 4 B_C18:G78_B B 18 ? B 78 ? 19 1 1 A A 5 1_555 A U 63 1_555 -0.014 -0.034 -0.015 -6.457 -12.942 8.644 5 B_A19:U77_B B 19 ? B 77 ? 20 1 1 A U 6 1_555 A A 62 1_555 0.088 -0.075 0.003 -4.598 -19.321 6.969 6 B_U20:A76_B B 20 ? B 76 ? 20 1 1 A A 7 1_555 A U 61 1_555 0.035 -0.120 0.240 1.672 -11.903 1.916 7 B_A21:U75_B B 21 ? B 75 ? 20 1 1 A U 37 1_555 A U 33 1_555 -3.666 -0.517 0.705 -36.006 44.397 -67.498 8 B_U51:U47_B B 51 ? B 47 ? ? ? 1 A A 38 1_555 A U 8 1_555 0.020 0.045 -0.493 -21.521 -0.125 0.634 9 B_A52:U22_B B 52 ? B 22 ? 20 1 1 A C 39 1_555 A G 32 1_555 0.124 -0.063 -0.143 8.682 5.632 -1.806 10 B_C53:G46_B B 53 ? B 46 ? 19 1 1 A A 11 1_555 A A 31 1_555 -6.406 -4.114 -0.371 12.223 -9.522 -14.937 11 B_A25:A45_B B 25 ? B 45 ? ? 10 1 A C 12 1_555 A G 30 1_555 0.123 -0.187 -0.345 9.347 -15.406 1.261 12 B_C26:G44_B B 26 ? B 44 ? 19 1 1 A G 13 1_555 A C 29 1_555 -0.252 -0.127 -0.165 -8.210 -5.224 -0.460 13 B_G27:C43_B B 27 ? B 43 ? 19 1 1 A C 14 1_555 A G 28 1_555 -0.039 -0.039 0.046 0.158 -4.118 1.045 14 B_C28:G42_B B 28 ? B 42 ? 19 1 1 A G 15 1_555 A C 27 1_555 -0.309 -0.108 0.257 1.910 -10.611 -0.509 15 B_G29:C41_B B 29 ? B 41 ? 19 1 1 A U 16 1_555 A A 26 1_555 -0.024 -0.123 0.051 4.270 -3.550 4.759 16 B_U30:A40_B B 30 ? B 40 ? 20 1 1 A G 17 1_555 A C 25 1_555 -0.176 -0.125 0.075 3.024 -5.362 1.544 17 B_G31:C39_B B 31 ? B 39 ? 19 1 1 A C 40 1_555 A G 58 1_555 0.249 -0.098 0.312 -10.999 -11.412 3.533 18 B_C54:G72_B B 54 ? B 72 ? 19 1 1 A G 41 1_555 A C 57 1_555 -0.194 -0.095 0.248 -4.867 -6.912 -1.037 19 B_G55:C71_B B 55 ? B 71 ? 19 1 1 A G 42 1_555 A C 56 1_555 -0.193 -0.125 0.306 1.005 -10.987 -2.481 20 B_G56:C70_B B 56 ? B 70 ? 19 1 1 A G 43 1_555 A U 55 1_555 -2.253 -0.521 0.206 3.583 -11.371 -3.353 21 B_G57:U69_B B 57 ? B 69 ? 28 1 1 A C 44 1_555 A G 54 1_555 0.259 -0.153 0.039 3.368 -12.694 -0.252 22 B_C58:G68_B B 58 ? B 68 ? 19 1 1 A A 45 1_555 A U 53 1_555 0.328 -0.055 -0.038 -1.600 -7.650 0.953 23 B_A59:U67_B B 59 ? B 67 ? 20 1 1 A C 46 1_555 A G 24 1_555 0.019 -0.051 0.232 -15.296 -11.207 0.843 24 B_C60:G38_B B 60 ? B 38 ? 19 1 1 A C 47 1_555 A G 23 1_555 0.051 -0.145 0.416 -0.440 -9.957 -4.649 25 B_C61:G37_B B 61 ? B 37 ? 19 1 1 A A 50 1_555 A A 21 1_555 4.136 1.522 0.488 3.983 3.924 -111.523 26 B_A64:A35_B B 64 ? B 35 ? 5 4 1 A G 48 1_555 A U 49 1_555 8.034 1.872 0.402 1.067 5.998 18.627 27 B_G62:U63_B B 62 ? B 63 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 67 1_555 A G 2 1_555 A C 66 1_555 0.139 -1.197 3.334 -2.389 5.018 36.067 -2.602 -0.550 3.130 8.046 3.830 36.479 1 BB_G15G16:C80C81_BB B 15 ? B 81 ? B 16 ? B 80 ? 1 A G 2 1_555 A C 66 1_555 A A 3 1_555 A U 65 1_555 -0.046 -1.392 3.084 0.231 8.244 35.515 -3.253 0.103 2.704 13.295 -0.373 36.430 2 BB_G16A17:U79C80_BB B 16 ? B 80 ? B 17 ? B 79 ? 1 A A 3 1_555 A U 65 1_555 A C 4 1_555 A G 64 1_555 0.548 -1.625 3.129 3.161 5.499 29.100 -4.223 -0.459 2.823 10.784 -6.198 29.769 3 BB_A17C18:G78U79_BB B 17 ? B 79 ? B 18 ? B 78 ? 1 A C 4 1_555 A G 64 1_555 A A 5 1_555 A U 63 1_555 0.286 -1.665 3.386 1.236 12.378 33.587 -4.411 -0.296 2.637 20.565 -2.054 35.755 4 BB_C18A19:U77G78_BB B 18 ? B 78 ? B 19 ? B 77 ? 1 A A 5 1_555 A U 63 1_555 A U 6 1_555 A A 62 1_555 -0.020 -1.086 3.226 2.147 10.766 29.859 -3.823 0.403 2.676 20.060 -4.000 31.770 5 BB_A19U20:A76U77_BB B 19 ? B 77 ? B 20 ? B 76 ? 1 A U 6 1_555 A A 62 1_555 A A 7 1_555 A U 61 1_555 0.450 -1.396 2.922 2.017 19.577 27.781 -4.818 -0.520 1.640 35.660 -3.675 33.933 6 BB_U20A21:U75A76_BB B 20 ? B 76 ? B 21 ? B 75 ? 1 A A 7 1_555 A U 61 1_555 A U 37 1_555 A U 33 1_555 -1.786 6.319 2.490 16.690 3.097 157.959 3.211 0.945 2.472 1.577 -8.499 158.204 7 BB_A21U51:U47U75_BB B 21 ? B 75 ? B 51 ? B 47 ? 1 A U 37 1_555 A U 33 1_555 A A 38 1_555 A U 8 1_555 -0.196 -1.021 3.237 -1.086 26.071 4.959 -7.353 0.214 -0.384 79.357 3.307 26.552 8 BB_U51A52:U22U47_BB B 51 ? B 47 ? B 52 ? B 22 ? 1 A A 38 1_555 A U 8 1_555 A C 39 1_555 A G 32 1_555 2.109 -0.170 2.633 -1.788 9.829 44.336 -0.907 -2.858 2.461 12.832 2.335 45.393 9 BB_A52C53:G46U22_BB B 52 ? B 22 ? B 53 ? B 46 ? 1 A C 39 1_555 A G 32 1_555 A A 11 1_555 A A 31 1_555 -2.557 -2.482 3.064 -12.549 -3.733 18.566 -4.628 0.845 4.320 -10.102 33.957 22.685 10 BB_C53A25:A45G46_BB B 53 ? B 46 ? B 25 ? B 45 ? 1 A A 11 1_555 A A 31 1_555 A C 12 1_555 A G 30 1_555 1.171 -1.265 3.555 -2.370 5.311 65.969 -1.386 -1.173 3.417 4.868 2.172 66.196 11 BB_A25C26:G44A45_BB B 25 ? B 45 ? B 26 ? B 44 ? 1 A C 12 1_555 A G 30 1_555 A G 13 1_555 A C 29 1_555 -0.543 -2.112 3.713 -1.206 12.981 29.286 -6.196 0.766 2.588 24.219 2.250 31.999 12 BB_C26G27:C43G44_BB B 26 ? B 44 ? B 27 ? B 43 ? 1 A G 13 1_555 A C 29 1_555 A C 14 1_555 A G 28 1_555 0.874 -2.541 3.082 0.407 3.461 24.658 -6.818 -1.919 2.719 8.053 -0.948 24.899 13 BB_G27C28:G42C43_BB B 27 ? B 43 ? B 28 ? B 42 ? 1 A C 14 1_555 A G 28 1_555 A G 15 1_555 A C 27 1_555 -0.669 -2.083 3.027 -2.285 6.824 28.370 -5.398 0.898 2.513 13.647 4.569 29.251 14 BB_C28G29:C41G42_BB B 28 ? B 42 ? B 29 ? B 41 ? 1 A G 15 1_555 A C 27 1_555 A U 16 1_555 A A 26 1_555 0.112 -1.383 3.237 0.541 8.676 32.913 -3.663 -0.110 2.795 14.990 -0.935 34.011 15 BB_G29U30:A40C41_BB B 29 ? B 41 ? B 30 ? B 40 ? 1 A U 16 1_555 A A 26 1_555 A G 17 1_555 A C 25 1_555 0.695 -1.860 3.215 0.103 4.833 31.593 -4.204 -1.245 2.908 8.811 -0.187 31.952 16 BB_U30G31:C39A40_BB B 30 ? B 40 ? B 31 ? B 39 ? 1 A C 40 1_555 A G 58 1_555 A G 41 1_555 A C 57 1_555 -0.997 -1.775 2.959 1.237 8.856 31.562 -4.407 1.943 2.349 15.886 -2.220 32.773 17 BB_C54G55:C71G72_BB B 54 ? B 72 ? B 55 ? B 71 ? 1 A G 41 1_555 A C 57 1_555 A G 42 1_555 A C 56 1_555 -0.014 -0.710 3.148 -0.686 8.126 31.946 -2.549 -0.085 2.885 14.471 1.222 32.944 18 BB_G55G56:C70C71_BB B 55 ? B 71 ? B 56 ? B 70 ? 1 A G 42 1_555 A C 56 1_555 A G 43 1_555 A U 55 1_555 0.069 -1.627 2.995 -2.821 7.793 26.037 -5.085 -0.739 2.395 16.764 6.068 27.303 19 BB_G56G57:U69C70_BB B 56 ? B 70 ? B 57 ? B 69 ? 1 A G 43 1_555 A U 55 1_555 A C 44 1_555 A G 54 1_555 0.279 -1.149 3.280 0.752 1.585 43.016 -1.722 -0.306 3.242 2.161 -1.026 43.050 20 BB_G57C58:G68U69_BB B 57 ? B 69 ? B 58 ? B 68 ? 1 A C 44 1_555 A G 54 1_555 A A 45 1_555 A U 53 1_555 0.406 -1.732 3.401 0.037 3.520 34.204 -3.487 -0.681 3.212 5.965 -0.064 34.380 21 BB_C58A59:U67G68_BB B 58 ? B 68 ? B 59 ? B 67 ? 1 A A 45 1_555 A U 53 1_555 A C 46 1_555 A G 24 1_555 2.109 -0.579 3.287 6.536 8.126 53.771 -1.133 -1.891 3.390 8.891 -7.151 54.699 22 BB_A59C60:G38U67_BB B 59 ? B 67 ? B 60 ? B 38 ? 1 A C 46 1_555 A G 24 1_555 A C 47 1_555 A G 23 1_555 -0.657 -0.635 3.067 -1.931 6.373 28.352 -2.553 0.916 2.896 12.788 3.876 29.108 23 BB_C60C61:G37G38_BB B 60 ? B 38 ? B 61 ? B 37 ? 1 A C 47 1_555 A G 23 1_555 A A 50 1_555 A A 21 1_555 2.628 3.049 4.193 69.925 -160.296 -133.734 -0.706 1.671 4.541 80.336 35.045 -177.990 24 BB_C61A64:A35G37_BB B 61 ? B 37 ? B 64 ? B 35 ? 1 A A 50 1_555 A A 21 1_555 A G 48 1_555 A U 49 1_555 -3.124 -1.816 4.101 22.722 -172.604 135.299 -0.084 1.671 4.323 -86.522 -11.390 177.755 25 BB_A64G62:U63A35_BB B 64 ? B 35 ? B 62 ? B 63 ? # _atom_sites.entry_id 4FEP _atom_sites.fract_transf_matrix[1][1] 0.007515 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000184 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028367 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023899 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O P # loop_