data_4FFY # _entry.id 4FFY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4FFY RCSB RCSB072852 WWPDB D_1000072852 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3IRC 'Dengue-1 Envelope Protein Domain III.' unspecified PDB 4FFZ . unspecified TargetTrack IDP00272 . unspecified # _pdbx_database_status.entry_id 4FFY _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-06-01 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Austin, S.K.' 1 'Nelson, C.A.' 2 'Fremont, D.H.' 3 'Center for Structural Genomics of Infectious Diseases (CSGID)' 4 # _citation.id primary _citation.title 'Structural Basis of Differential Neutralization of DENV-1 Genotypes by an Antibody that Recognizes a Cryptic Epitope.' _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 8 _citation.page_first e1002930 _citation.page_last e1002930 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23055922 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1002930 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Austin, S.K.' 1 primary 'Dowd, K.A.' 2 primary 'Shrestha, B.' 3 primary 'Nelson, C.A.' 4 primary 'Edeling, M.A.' 5 primary 'Johnson, S.' 6 primary 'Pierson, T.C.' 7 primary 'Diamond, M.S.' 8 primary 'Fremont, D.H.' 9 # _cell.length_a 135.330 _cell.length_b 135.330 _cell.length_c 52.250 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4FFY _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.entry_id 4FFY _symmetry.Int_Tables_number 96 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DENV1-E111 single chain variable fragment (light chain)' 13046.097 1 ? ? ? ? 2 polymer man 'DENV1-E111 single chain variable fragment (heavy chain)' 14868.590 1 ? ? ? ? 3 polymer man 'envelope glycoprotein' 11985.743 1 ? ? 'UNP residues 573-679' ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 7 water nat water 18.015 138 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NIVLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTID SVETDDAATYYCQQNNEDPYTFGGGTKLEIKGGGGSGGGGSGGGGS ; ;NIVLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTID SVETDDAATYYCQQNNEDPYTFGGGTKLEIKGGGGSGGGGSGGGGS ; L ? 2 'polypeptide(L)' no no ;QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAY MQLSSLTSEDSAIYYCARWFFPWYFDVWGTGTTVTVSSAASGADHHHHHH ; ;QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAY MQLSSLTSEDSAIYYCARWFFPWYFDVWGTGTTVTVSSAASGADHHHHHH ; H ? 3 'polypeptide(L)' no no ;MASMTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSTQDEKGATQNGRLITANPIVTDKEKPVNIE AEPPFGESYIVVGAGEKALKLSWFKKGSSIG ; ;MASMTLKGMSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSTQDEKGATQNGRLITANPIVTDKEKPVNIE AEPPFGESYIVVGAGEKALKLSWFKKGSSIG ; A IDP00272 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 ILE n 1 3 VAL n 1 4 LEU n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 ALA n 1 10 SER n 1 11 LEU n 1 12 ALA n 1 13 VAL n 1 14 SER n 1 15 LEU n 1 16 GLY n 1 17 GLN n 1 18 ARG n 1 19 ALA n 1 20 THR n 1 21 ILE n 1 22 SER n 1 23 CYS n 1 24 ARG n 1 25 ALA n 1 26 SER n 1 27 GLU n 1 28 SER n 1 29 VAL n 1 30 ASP n 1 31 HIS n 1 32 TYR n 1 33 GLY n 1 34 ASN n 1 35 SER n 1 36 PHE n 1 37 ILE n 1 38 TYR n 1 39 TRP n 1 40 TYR n 1 41 GLN n 1 42 GLN n 1 43 LYS n 1 44 PRO n 1 45 GLY n 1 46 GLN n 1 47 PRO n 1 48 PRO n 1 49 LYS n 1 50 LEU n 1 51 LEU n 1 52 ILE n 1 53 TYR n 1 54 LEU n 1 55 ALA n 1 56 SER n 1 57 ASN n 1 58 LEU n 1 59 GLU n 1 60 SER n 1 61 GLY n 1 62 VAL n 1 63 PRO n 1 64 ALA n 1 65 ARG n 1 66 PHE n 1 67 SER n 1 68 GLY n 1 69 SER n 1 70 GLY n 1 71 SER n 1 72 GLU n 1 73 THR n 1 74 ASP n 1 75 PHE n 1 76 THR n 1 77 LEU n 1 78 THR n 1 79 ILE n 1 80 ASP n 1 81 SER n 1 82 VAL n 1 83 GLU n 1 84 THR n 1 85 ASP n 1 86 ASP n 1 87 ALA n 1 88 ALA n 1 89 THR n 1 90 TYR n 1 91 TYR n 1 92 CYS n 1 93 GLN n 1 94 GLN n 1 95 ASN n 1 96 ASN n 1 97 GLU n 1 98 ASP n 1 99 PRO n 1 100 TYR n 1 101 THR n 1 102 PHE n 1 103 GLY n 1 104 GLY n 1 105 GLY n 1 106 THR n 1 107 LYS n 1 108 LEU n 1 109 GLU n 1 110 ILE n 1 111 LYS n 1 112 GLY n 1 113 GLY n 1 114 GLY n 1 115 GLY n 1 116 SER n 1 117 GLY n 1 118 GLY n 1 119 GLY n 1 120 GLY n 1 121 SER n 1 122 GLY n 1 123 GLY n 1 124 GLY n 1 125 GLY n 1 126 SER n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 LEU n 2 6 GLN n 2 7 PRO n 2 8 GLY n 2 9 ALA n 2 10 GLU n 2 11 LEU n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 ALA n 2 17 SER n 2 18 MET n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 LYS n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 TYR n 2 28 THR n 2 29 PHE n 2 30 THR n 2 31 ASN n 2 32 TRP n 2 33 TRP n 2 34 MET n 2 35 HIS n 2 36 TRP n 2 37 VAL n 2 38 ARG n 2 39 LEU n 2 40 ARG n 2 41 PRO n 2 42 GLY n 2 43 ARG n 2 44 GLY n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 ILE n 2 49 GLY n 2 50 ARG n 2 51 ILE n 2 52 ASP n 2 53 PRO n 2 54 ASN n 2 55 SER n 2 56 ASP n 2 57 VAL n 2 58 ASN n 2 59 LYS n 2 60 TYR n 2 61 ASN n 2 62 GLU n 2 63 LYS n 2 64 PHE n 2 65 GLU n 2 66 ASN n 2 67 ARG n 2 68 ALA n 2 69 SER n 2 70 LEU n 2 71 THR n 2 72 VAL n 2 73 ASP n 2 74 LYS n 2 75 HIS n 2 76 SER n 2 77 SER n 2 78 THR n 2 79 ALA n 2 80 TYR n 2 81 MET n 2 82 GLN n 2 83 LEU n 2 84 SER n 2 85 SER n 2 86 LEU n 2 87 THR n 2 88 SER n 2 89 GLU n 2 90 ASP n 2 91 SER n 2 92 ALA n 2 93 ILE n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 ALA n 2 98 ARG n 2 99 TRP n 2 100 PHE n 2 101 PHE n 2 102 PRO n 2 103 TRP n 2 104 TYR n 2 105 PHE n 2 106 ASP n 2 107 VAL n 2 108 TRP n 2 109 GLY n 2 110 THR n 2 111 GLY n 2 112 THR n 2 113 THR n 2 114 VAL n 2 115 THR n 2 116 VAL n 2 117 SER n 2 118 SER n 2 119 ALA n 2 120 ALA n 2 121 SER n 2 122 GLY n 2 123 ALA n 2 124 ASP n 2 125 HIS n 2 126 HIS n 2 127 HIS n 2 128 HIS n 2 129 HIS n 2 130 HIS n 3 1 MET n 3 2 ALA n 3 3 SER n 3 4 MET n 3 5 THR n 3 6 LEU n 3 7 LYS n 3 8 GLY n 3 9 MET n 3 10 SER n 3 11 TYR n 3 12 VAL n 3 13 MET n 3 14 CYS n 3 15 THR n 3 16 GLY n 3 17 SER n 3 18 PHE n 3 19 LYS n 3 20 LEU n 3 21 GLU n 3 22 LYS n 3 23 GLU n 3 24 VAL n 3 25 ALA n 3 26 GLU n 3 27 THR n 3 28 GLN n 3 29 HIS n 3 30 GLY n 3 31 THR n 3 32 VAL n 3 33 LEU n 3 34 VAL n 3 35 GLN n 3 36 VAL n 3 37 LYS n 3 38 TYR n 3 39 GLU n 3 40 GLY n 3 41 THR n 3 42 ASP n 3 43 ALA n 3 44 PRO n 3 45 CYS n 3 46 LYS n 3 47 ILE n 3 48 PRO n 3 49 PHE n 3 50 SER n 3 51 THR n 3 52 GLN n 3 53 ASP n 3 54 GLU n 3 55 LYS n 3 56 GLY n 3 57 ALA n 3 58 THR n 3 59 GLN n 3 60 ASN n 3 61 GLY n 3 62 ARG n 3 63 LEU n 3 64 ILE n 3 65 THR n 3 66 ALA n 3 67 ASN n 3 68 PRO n 3 69 ILE n 3 70 VAL n 3 71 THR n 3 72 ASP n 3 73 LYS n 3 74 GLU n 3 75 LYS n 3 76 PRO n 3 77 VAL n 3 78 ASN n 3 79 ILE n 3 80 GLU n 3 81 ALA n 3 82 GLU n 3 83 PRO n 3 84 PRO n 3 85 PHE n 3 86 GLY n 3 87 GLU n 3 88 SER n 3 89 TYR n 3 90 ILE n 3 91 VAL n 3 92 VAL n 3 93 GLY n 3 94 ALA n 3 95 GLY n 3 96 GLU n 3 97 LYS n 3 98 ALA n 3 99 LEU n 3 100 LYS n 3 101 LEU n 3 102 SER n 3 103 TRP n 3 104 PHE n 3 105 LYS n 3 106 LYS n 3 107 GLY n 3 108 SER n 3 109 SER n 3 110 ILE n 3 111 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? 'IFN-aBR-/- C57BL/6 mice' ? ? soluble ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)RIL' ? ? ? ? ? ? ? plasmid ? ? ? pAK400 ? ? 2 1 sample ? ? ? ? ? ? ? 'IFN-aBR-/- C57BL/6 mice' ? ? soluble ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)RIL' ? ? ? ? ? ? ? plasmid ? ? ? pAK400 ? ? 3 1 sample ? ? ? ? ? 'Envelope domain III' ? 16007 ? ? refolded ? 'Dengue virus 1' 11053 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)RIL' ? ? ? ? ? ? ? plasmid ? ? ? 'pET21a(+)' ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9J7C6_9FLAV Q9J7C6 3 ;TLKGMSYVMCTGSFKLEKEVAETQHGTVLVQVKYEGTDAPCKIPFSTQDEKGATQNGRLITANPIVTDKEKPVNIEAEPP FGESYIVVGAGEKALKLSWFKKGSSIG ; 573 ? 2 PDB 4FFY 4FFY 1 ;NIVLTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTID SVETDDAATYYCQQNNEDPYTFGGGTKLEIKGGGGSGGGGSGGGGS ; ? ? 3 PDB 4FFY 4FFY 2 ;QVQLLQPGAELVKPGASMKLSCKASGYTFTNWWMHWVRLRPGRGLEWIGRIDPNSDVNKYNEKFENRASLTVDKHSSTAY MQLSSLTSEDSAIYYCARWFFPWYFDVWGTGTTVTVSSAASGADHHHHHH ; ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4FFY A 5 ? 111 ? Q9J7C6 573 ? 679 ? 293 399 2 2 4FFY L 1 ? 126 ? 4FFY 1 ? 122 ? 1 122 3 3 4FFY H 1 ? 130 ? 4FFY 1 ? 130 ? 1 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4FFY MET A 1 ? UNP Q9J7C6 ? ? 'EXPRESSION TAG' 289 1 1 4FFY ALA A 2 ? UNP Q9J7C6 ? ? 'EXPRESSION TAG' 290 2 1 4FFY SER A 3 ? UNP Q9J7C6 ? ? 'EXPRESSION TAG' 291 3 1 4FFY MET A 4 ? UNP Q9J7C6 ? ? 'EXPRESSION TAG' 292 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4FFY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_percent_sol 58.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20% PEG 3350, 0.2M Potassium sulfate, and 5% glycerol, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-08-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.007 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 1.007 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4FFY _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.500 _reflns.number_obs 17132 _reflns.number_all ? _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.09200 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.78 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.200 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 94.3 _reflns_shell.Rmerge_I_obs 0.49400 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.35 _reflns_shell.pdbx_redundancy 2.90 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4FFY _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 17091 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.35 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 98.1 _refine.ls_R_factor_obs 0.176 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.174 _refine.ls_R_factor_R_free 0.229 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.990 _refine.ls_number_reflns_R_free 853 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 1.000 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 54.83 _refine.aniso_B[1][1] 0.85090 _refine.aniso_B[2][2] 0.85090 _refine.aniso_B[3][3] -1.70170 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.34 _refine.solvent_model_param_bsol 43.36 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.98 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.410 _refine.pdbx_overall_phase_error 22.230 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2562 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 15 _refine_hist.number_atoms_solvent 138 _refine_hist.number_atoms_total 2715 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 41.35 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.004 ? ? 2639 'X-RAY DIFFRACTION' ? f_angle_d 0.883 ? ? 3580 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 12.746 ? ? 944 'X-RAY DIFFRACTION' ? f_chiral_restr 0.060 ? ? 386 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 457 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.4964 2.6528 2547 0.3310 95.00 0.4608 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.6528 2.8576 2568 0.2390 95.00 0.2893 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.8576 3.1450 2702 0.1858 99.00 0.2522 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.1450 3.5999 2726 0.1718 100.00 0.2491 . . 144 . . . . 'X-RAY DIFFRACTION' . 3.5999 4.5346 2787 0.1415 100.00 0.1983 . . 147 . . . . 'X-RAY DIFFRACTION' . 4.5346 41.3611 2908 0.1635 100.00 0.1959 . . 152 . . . . # _struct.entry_id 4FFY _struct.title 'Crystal structure of DENV1-E111 single chain variable fragment bound to DENV-1 DIII, strain 16007.' _struct.pdbx_descriptor ;DENV1-E111 single chain variable fragment (light chain), DENV1-E111 single chain variable fragment (heavy chain), envelope glycoprotein ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4FFY _struct_keywords.text ;Viral envelope proteins, structural genomics, antibody epitopes, Flavivirus, Dengue virus, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, IMMUNE SYSTEM, IMMUNE SYSTEM-VIRAL PROTEIN complex ; _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM/VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 5 ? J N N 7 ? K N N 7 ? L N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 83 ? ALA A 87 ? GLU L 79 ALA L 83 5 ? 5 HELX_P HELX_P2 2 THR B 28 ? TRP B 32 ? THR H 28 TRP H 32 5 ? 5 HELX_P HELX_P3 3 THR B 87 ? SER B 91 ? THR H 87 SER H 91 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 92 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.052 ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.042 ? disulf3 disulf ? ? C CYS 14 SG ? ? ? 1_555 C CYS 45 SG ? ? A CYS 302 A CYS 333 1_555 ? ? ? ? ? ? ? 2.042 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 -1.18 2 ASP 98 A . ? ASP 94 L PRO 99 A ? PRO 95 L 1 -2.37 3 PHE 101 B . ? PHE 101 H PRO 102 B ? PRO 102 H 1 -3.17 4 ALA 43 C . ? ALA 331 A PRO 44 C ? PRO 332 A 1 2.32 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 2 ? E ? 4 ? F ? 6 ? G ? 4 ? H ? 3 ? I ? 4 ? J ? 2 ? K ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel F 4 5 ? anti-parallel F 5 6 ? anti-parallel G 1 2 ? parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? anti-parallel K 1 2 ? anti-parallel K 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 4 ? SER A 7 ? LEU L 4 SER L 7 A 2 ALA A 19 ? ALA A 25 ? ALA L 19 ALA L 25 A 3 ASP A 74 ? ILE A 79 ? ASP L 70 ILE L 75 A 4 PHE A 66 ? SER A 71 ? PHE L 62 SER L 67 B 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14 B 2 THR A 106 ? LYS A 111 ? THR L 102 LYS L 107 B 3 ALA A 88 ? GLN A 94 ? ALA L 84 GLN L 90 B 4 ILE A 37 ? GLN A 42 ? ILE L 33 GLN L 38 B 5 LYS A 49 ? TYR A 53 ? LYS L 45 TYR L 49 B 6 ASN A 57 ? LEU A 58 ? ASN L 53 LEU L 54 C 1 SER A 10 ? SER A 14 ? SER L 10 SER L 14 C 2 THR A 106 ? LYS A 111 ? THR L 102 LYS L 107 C 3 ALA A 88 ? GLN A 94 ? ALA L 84 GLN L 90 C 4 THR A 101 ? PHE A 102 ? THR L 97 PHE L 98 D 1 ASP A 30 ? HIS A 31 A ASP L 30 HIS L 30 D 2 ASN A 34 D SER A 35 ? ASN L 30 SER L 31 E 1 GLN B 3 ? LEU B 5 ? GLN H 3 LEU H 5 E 2 MET B 18 ? SER B 25 ? MET H 18 SER H 25 E 3 THR B 78 ? LEU B 83 ? THR H 78 LEU H 83 E 4 ALA B 68 ? ASP B 73 ? ALA H 68 ASP H 73 F 1 ALA B 9 ? VAL B 12 ? ALA H 9 VAL H 12 F 2 THR B 112 ? VAL B 116 ? THR H 112 VAL H 116 F 3 ALA B 92 ? TRP B 99 ? ALA H 92 TRP H 99 F 4 MET B 34 ? ARG B 40 ? MET H 34 ARG H 40 F 5 GLY B 44 ? ILE B 51 ? GLY H 44 ILE H 51 F 6 ASN B 58 ? TYR B 60 ? ASN H 58 TYR H 60 G 1 ALA B 9 ? VAL B 12 ? ALA H 9 VAL H 12 G 2 THR B 112 ? VAL B 116 ? THR H 112 VAL H 116 G 3 ALA B 92 ? TRP B 99 ? ALA H 92 TRP H 99 G 4 PHE B 105 ? TRP B 108 ? PHE H 105 TRP H 108 H 1 SER C 17 ? LEU C 20 ? SER A 305 LEU A 308 H 2 VAL C 32 ? GLU C 39 ? VAL A 320 GLU A 327 H 3 ALA C 25 ? GLU C 26 ? ALA A 313 GLU A 314 I 1 SER C 17 ? LEU C 20 ? SER A 305 LEU A 308 I 2 VAL C 32 ? GLU C 39 ? VAL A 320 GLU A 327 I 3 VAL C 77 ? GLU C 82 ? VAL A 365 GLU A 370 I 4 ARG C 62 ? LEU C 63 ? ARG A 350 LEU A 351 J 1 CYS C 45 ? LYS C 46 ? CYS A 333 LYS A 334 J 2 ILE C 69 ? VAL C 70 ? ILE A 357 VAL A 358 K 1 PHE C 49 ? GLN C 52 ? PHE A 337 GLN A 340 K 2 GLY C 86 ? VAL C 92 ? GLY A 374 VAL A 380 K 3 LEU C 99 ? LYS C 105 ? LEU A 387 LYS A 393 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 5 ? N THR L 5 O ARG A 24 ? O ARG L 24 A 2 3 N ILE A 21 ? N ILE L 21 O LEU A 77 ? O LEU L 73 A 3 4 O THR A 78 ? O THR L 74 N SER A 67 ? N SER L 63 B 1 2 N LEU A 11 ? N LEU L 11 O GLU A 109 ? O GLU L 105 B 2 3 O LEU A 108 ? O LEU L 104 N ALA A 88 ? N ALA L 84 B 3 4 O TYR A 91 ? O TYR L 87 N TYR A 40 ? N TYR L 36 B 4 5 N TRP A 39 ? N TRP L 35 O LEU A 51 ? O LEU L 47 B 5 6 N TYR A 53 ? N TYR L 49 O ASN A 57 ? O ASN L 53 C 1 2 N LEU A 11 ? N LEU L 11 O GLU A 109 ? O GLU L 105 C 2 3 O LEU A 108 ? O LEU L 104 N ALA A 88 ? N ALA L 84 C 3 4 N GLN A 94 ? N GLN L 90 O THR A 101 ? O THR L 97 D 1 2 N HIS A 31 A N HIS L 30 O ASN A 34 D O ASN L 30 E 1 2 N LEU B 5 ? N LEU H 5 O LYS B 23 ? O LYS H 23 E 2 3 N LEU B 20 ? N LEU H 20 O MET B 81 ? O MET H 81 E 3 4 O TYR B 80 ? O TYR H 80 N THR B 71 ? N THR H 71 F 1 2 N GLU B 10 ? N GLU H 10 O THR B 115 ? O THR H 115 F 2 3 O VAL B 114 ? O VAL H 114 N ALA B 92 ? N ALA H 92 F 3 4 O TYR B 95 ? O TYR H 95 N VAL B 37 ? N VAL H 37 F 4 5 N TRP B 36 ? N TRP H 36 O ILE B 48 ? O ILE H 48 F 5 6 N ARG B 50 ? N ARG H 50 O LYS B 59 ? O LYS H 59 G 1 2 N GLU B 10 ? N GLU H 10 O THR B 115 ? O THR H 115 G 2 3 O VAL B 114 ? O VAL H 114 N ALA B 92 ? N ALA H 92 G 3 4 N ARG B 98 ? N ARG H 98 O VAL B 107 ? O VAL H 107 H 1 2 N LYS C 19 ? N LYS A 307 O LYS C 37 ? O LYS A 325 H 2 3 O LEU C 33 ? O LEU A 321 N ALA C 25 ? N ALA A 313 I 1 2 N LYS C 19 ? N LYS A 307 O LYS C 37 ? O LYS A 325 I 2 3 N VAL C 34 ? N VAL A 322 O ILE C 79 ? O ILE A 367 I 3 4 O GLU C 82 ? O GLU A 370 N ARG C 62 ? N ARG A 350 J 1 2 N CYS C 45 ? N CYS A 333 O VAL C 70 ? O VAL A 358 K 1 2 N SER C 50 ? N SER A 338 O VAL C 91 ? O VAL A 379 K 2 3 N ILE C 90 ? N ILE A 378 O LEU C 101 ? O LEU A 389 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL L 301' AC2 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CL L 302' AC3 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CL L 303' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL L 304' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 H 201' AC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL H 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 GLN A 41 ? GLN L 37 . ? 1_555 ? 2 AC1 7 LYS A 49 ? LYS L 45 . ? 1_555 ? 3 AC1 7 PRO A 63 ? PRO L 59 . ? 1_555 ? 4 AC1 7 PHE A 66 ? PHE L 62 . ? 1_555 ? 5 AC1 7 ASP A 85 ? ASP L 81 . ? 1_555 ? 6 AC1 7 ASP A 86 ? ASP L 82 . ? 1_555 ? 7 AC1 7 CL G . ? CL L 304 . ? 1_555 ? 8 AC2 2 LYS A 43 ? LYS L 39 . ? 1_555 ? 9 AC2 2 HOH J . ? HOH L 455 . ? 1_555 ? 10 AC3 2 TYR B 95 ? TYR H 95 . ? 1_555 ? 11 AC3 2 HOH J . ? HOH L 412 . ? 1_555 ? 12 AC4 3 ARG A 65 ? ARG L 61 . ? 1_555 ? 13 AC4 3 ASP A 85 ? ASP L 81 . ? 1_555 ? 14 AC4 3 GOL D . ? GOL L 301 . ? 1_555 ? 15 AC5 5 GLU C 96 ? GLU A 384 . ? 1_555 ? 16 AC5 5 TYR B 27 ? TYR H 27 . ? 1_555 ? 17 AC5 5 THR B 28 ? THR H 28 . ? 1_555 ? 18 AC5 5 ASN B 31 ? ASN H 31 . ? 1_555 ? 19 AC5 5 TRP B 32 ? TRP H 32 . ? 1_555 ? 20 AC6 3 ASP B 73 ? ASP H 73 . ? 1_555 ? 21 AC6 3 LYS B 74 ? LYS H 74 . ? 1_555 ? 22 AC6 3 HOH K . ? HOH H 336 . ? 1_555 ? # _atom_sites.entry_id 4FFY _atom_sites.fract_transf_matrix[1][1] 0.007389 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007389 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019139 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 LEU 4 4 4 LEU LEU L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 ALA 9 9 9 ALA ALA L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 ALA 12 12 12 ALA ALA L . n A 1 13 VAL 13 13 13 VAL VAL L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 LEU 15 15 15 LEU LEU L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 GLN 17 17 17 GLN GLN L . n A 1 18 ARG 18 18 18 ARG ARG L . n A 1 19 ALA 19 19 19 ALA ALA L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 SER 22 22 22 SER SER L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 ALA 25 25 25 ALA ALA L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLU 27 27 27 GLU GLU L . n A 1 28 SER 28 28 28 SER SER L . n A 1 29 VAL 29 29 29 VAL VAL L . n A 1 30 ASP 30 30 30 ASP ASP L . n A 1 31 HIS 31 30 30 HIS HIS L A n A 1 32 TYR 32 30 30 TYR TYR L B n A 1 33 GLY 33 30 30 GLY GLY L C n A 1 34 ASN 34 30 30 ASN ASN L D n A 1 35 SER 35 31 31 SER SER L . n A 1 36 PHE 36 32 32 PHE PHE L . n A 1 37 ILE 37 33 33 ILE ILE L . n A 1 38 TYR 38 34 34 TYR TYR L . n A 1 39 TRP 39 35 35 TRP TRP L . n A 1 40 TYR 40 36 36 TYR TYR L . n A 1 41 GLN 41 37 37 GLN GLN L . n A 1 42 GLN 42 38 38 GLN GLN L . n A 1 43 LYS 43 39 39 LYS LYS L . n A 1 44 PRO 44 40 40 PRO PRO L . n A 1 45 GLY 45 41 41 GLY GLY L . n A 1 46 GLN 46 42 42 GLN GLN L . n A 1 47 PRO 47 43 43 PRO PRO L . n A 1 48 PRO 48 44 44 PRO PRO L . n A 1 49 LYS 49 45 45 LYS LYS L . n A 1 50 LEU 50 46 46 LEU LEU L . n A 1 51 LEU 51 47 47 LEU LEU L . n A 1 52 ILE 52 48 48 ILE ILE L . n A 1 53 TYR 53 49 49 TYR TYR L . n A 1 54 LEU 54 50 50 LEU LEU L . n A 1 55 ALA 55 51 51 ALA ALA L . n A 1 56 SER 56 52 52 SER SER L . n A 1 57 ASN 57 53 53 ASN ASN L . n A 1 58 LEU 58 54 54 LEU LEU L . n A 1 59 GLU 59 55 55 GLU GLU L . n A 1 60 SER 60 56 56 SER SER L . n A 1 61 GLY 61 57 57 GLY GLY L . n A 1 62 VAL 62 58 58 VAL VAL L . n A 1 63 PRO 63 59 59 PRO PRO L . n A 1 64 ALA 64 60 60 ALA ALA L . n A 1 65 ARG 65 61 61 ARG ARG L . n A 1 66 PHE 66 62 62 PHE PHE L . n A 1 67 SER 67 63 63 SER SER L . n A 1 68 GLY 68 64 64 GLY GLY L . n A 1 69 SER 69 65 65 SER SER L . n A 1 70 GLY 70 66 66 GLY GLY L . n A 1 71 SER 71 67 67 SER SER L . n A 1 72 GLU 72 68 68 GLU GLU L . n A 1 73 THR 73 69 69 THR THR L . n A 1 74 ASP 74 70 70 ASP ASP L . n A 1 75 PHE 75 71 71 PHE PHE L . n A 1 76 THR 76 72 72 THR THR L . n A 1 77 LEU 77 73 73 LEU LEU L . n A 1 78 THR 78 74 74 THR THR L . n A 1 79 ILE 79 75 75 ILE ILE L . n A 1 80 ASP 80 76 76 ASP ASP L . n A 1 81 SER 81 77 77 SER SER L . n A 1 82 VAL 82 78 78 VAL VAL L . n A 1 83 GLU 83 79 79 GLU GLU L . n A 1 84 THR 84 80 80 THR THR L . n A 1 85 ASP 85 81 81 ASP ASP L . n A 1 86 ASP 86 82 82 ASP ASP L . n A 1 87 ALA 87 83 83 ALA ALA L . n A 1 88 ALA 88 84 84 ALA ALA L . n A 1 89 THR 89 85 85 THR THR L . n A 1 90 TYR 90 86 86 TYR TYR L . n A 1 91 TYR 91 87 87 TYR TYR L . n A 1 92 CYS 92 88 88 CYS CYS L . n A 1 93 GLN 93 89 89 GLN GLN L . n A 1 94 GLN 94 90 90 GLN GLN L . n A 1 95 ASN 95 91 91 ASN ASN L . n A 1 96 ASN 96 92 92 ASN ASN L . n A 1 97 GLU 97 93 93 GLU GLU L . n A 1 98 ASP 98 94 94 ASP ASP L . n A 1 99 PRO 99 95 95 PRO PRO L . n A 1 100 TYR 100 96 96 TYR TYR L . n A 1 101 THR 101 97 97 THR THR L . n A 1 102 PHE 102 98 98 PHE PHE L . n A 1 103 GLY 103 99 99 GLY GLY L . n A 1 104 GLY 104 100 100 GLY GLY L . n A 1 105 GLY 105 101 101 GLY GLY L . n A 1 106 THR 106 102 102 THR THR L . n A 1 107 LYS 107 103 103 LYS LYS L . n A 1 108 LEU 108 104 104 LEU LEU L . n A 1 109 GLU 109 105 105 GLU GLU L . n A 1 110 ILE 110 106 106 ILE ILE L . n A 1 111 LYS 111 107 107 LYS LYS L . n A 1 112 GLY 112 108 108 GLY GLY L . n A 1 113 GLY 113 109 ? ? ? L . n A 1 114 GLY 114 110 ? ? ? L . n A 1 115 GLY 115 111 ? ? ? L . n A 1 116 SER 116 112 ? ? ? L . n A 1 117 GLY 117 113 ? ? ? L . n A 1 118 GLY 118 114 ? ? ? L . n A 1 119 GLY 119 115 ? ? ? L . n A 1 120 GLY 120 116 ? ? ? L . n A 1 121 SER 121 117 ? ? ? L . n A 1 122 GLY 122 118 ? ? ? L . n A 1 123 GLY 123 119 ? ? ? L . n A 1 124 GLY 124 120 ? ? ? L . n A 1 125 GLY 125 121 ? ? ? L . n A 1 126 SER 126 122 ? ? ? L . n B 2 1 GLN 1 1 1 GLN GLN H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 LEU 5 5 5 LEU LEU H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 PRO 7 7 7 PRO PRO H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 ALA 9 9 9 ALA ALA H . n B 2 10 GLU 10 10 10 GLU GLU H . n B 2 11 LEU 11 11 11 LEU LEU H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 LYS 13 13 13 LYS LYS H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ALA 16 16 16 ALA ALA H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 MET 18 18 18 MET MET H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 LYS 23 23 23 LYS LYS H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 TYR 27 27 27 TYR TYR H . n B 2 28 THR 28 28 28 THR THR H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 THR 30 30 30 THR THR H . n B 2 31 ASN 31 31 31 ASN ASN H . n B 2 32 TRP 32 32 32 TRP TRP H . n B 2 33 TRP 33 33 33 TRP TRP H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 HIS 35 35 35 HIS HIS H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 VAL 37 37 37 VAL VAL H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 LEU 39 39 39 LEU LEU H . n B 2 40 ARG 40 40 40 ARG ARG H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLY 42 42 42 GLY GLY H . n B 2 43 ARG 43 43 43 ARG ARG H . n B 2 44 GLY 44 44 44 GLY GLY H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 ILE 48 48 48 ILE ILE H . n B 2 49 GLY 49 49 49 GLY GLY H . n B 2 50 ARG 50 50 50 ARG ARG H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 ASP 52 52 52 ASP ASP H . n B 2 53 PRO 53 53 52 PRO PRO H . n B 2 54 ASN 54 54 53 ASN ASN H . n B 2 55 SER 55 55 54 SER SER H . n B 2 56 ASP 56 56 55 ASP ASP H . n B 2 57 VAL 57 57 56 VAL VAL H . n B 2 58 ASN 58 58 57 ASN ASN H . n B 2 59 LYS 59 59 58 LYS LYS H . n B 2 60 TYR 60 60 59 TYR TYR H . n B 2 61 ASN 61 61 60 ASN ASN H . n B 2 62 GLU 62 62 61 GLU GLU H . n B 2 63 LYS 63 63 62 LYS LYS H . n B 2 64 PHE 64 64 63 PHE PHE H . n B 2 65 GLU 65 65 64 GLU GLU H . n B 2 66 ASN 66 66 65 ASN ASN H . n B 2 67 ARG 67 67 66 ARG ARG H . n B 2 68 ALA 68 68 67 ALA ALA H . n B 2 69 SER 69 69 68 SER SER H . n B 2 70 LEU 70 70 69 LEU LEU H . n B 2 71 THR 71 71 70 THR THR H . n B 2 72 VAL 72 72 71 VAL VAL H . n B 2 73 ASP 73 73 72 ASP ASP H . n B 2 74 LYS 74 74 73 LYS LYS H . n B 2 75 HIS 75 75 74 HIS HIS H . n B 2 76 SER 76 76 75 SER SER H . n B 2 77 SER 77 77 76 SER SER H . n B 2 78 THR 78 78 77 THR THR H . n B 2 79 ALA 79 79 78 ALA ALA H . n B 2 80 TYR 80 80 79 TYR TYR H . n B 2 81 MET 81 81 80 MET MET H . n B 2 82 GLN 82 82 81 GLN GLN H . n B 2 83 LEU 83 83 82 LEU LEU H . n B 2 84 SER 84 84 82 SER SER H . n B 2 85 SER 85 85 82 SER SER H . n B 2 86 LEU 86 86 82 LEU LEU H . n B 2 87 THR 87 87 83 THR THR H . n B 2 88 SER 88 88 84 SER SER H . n B 2 89 GLU 89 89 85 GLU GLU H . n B 2 90 ASP 90 90 86 ASP ASP H . n B 2 91 SER 91 91 87 SER SER H . n B 2 92 ALA 92 92 88 ALA ALA H . n B 2 93 ILE 93 93 89 ILE ILE H . n B 2 94 TYR 94 94 90 TYR TYR H . n B 2 95 TYR 95 95 91 TYR TYR H . n B 2 96 CYS 96 96 92 CYS CYS H . n B 2 97 ALA 97 97 93 ALA ALA H . n B 2 98 ARG 98 98 94 ARG ARG H . n B 2 99 TRP 99 99 95 TRP TRP H . n B 2 100 PHE 100 100 96 PHE PHE H . n B 2 101 PHE 101 101 97 PHE PHE H . n B 2 102 PRO 102 102 98 PRO PRO H . n B 2 103 TRP 103 103 99 TRP TRP H . n B 2 104 TYR 104 104 100 TYR TYR H . n B 2 105 PHE 105 105 100 PHE PHE H . n B 2 106 ASP 106 106 101 ASP ASP H . n B 2 107 VAL 107 107 102 VAL VAL H . n B 2 108 TRP 108 108 103 TRP TRP H . n B 2 109 GLY 109 109 104 GLY GLY H . n B 2 110 THR 110 110 105 THR THR H . n B 2 111 GLY 111 111 106 GLY GLY H . n B 2 112 THR 112 112 107 THR THR H . n B 2 113 THR 113 113 108 THR THR H . n B 2 114 VAL 114 114 109 VAL VAL H . n B 2 115 THR 115 115 110 THR THR H . n B 2 116 VAL 116 116 111 VAL VAL H . n B 2 117 SER 117 117 112 SER SER H . n B 2 118 SER 118 118 113 SER SER H . n B 2 119 ALA 119 119 114 ALA ALA H . n B 2 120 ALA 120 120 ? ? ? H . n B 2 121 SER 121 121 ? ? ? H . n B 2 122 GLY 122 122 ? ? ? H . n B 2 123 ALA 123 123 ? ? ? H . n B 2 124 ASP 124 124 ? ? ? H . n B 2 125 HIS 125 125 ? ? ? H . n B 2 126 HIS 126 126 ? ? ? H . n B 2 127 HIS 127 127 ? ? ? H . n B 2 128 HIS 128 128 ? ? ? H . n B 2 129 HIS 129 129 ? ? ? H . n B 2 130 HIS 130 130 ? ? ? H . n C 3 1 MET 1 289 ? ? ? A . n C 3 2 ALA 2 290 ? ? ? A . n C 3 3 SER 3 291 ? ? ? A . n C 3 4 MET 4 292 ? ? ? A . n C 3 5 THR 5 293 ? ? ? A . n C 3 6 LEU 6 294 ? ? ? A . n C 3 7 LYS 7 295 ? ? ? A . n C 3 8 GLY 8 296 ? ? ? A . n C 3 9 MET 9 297 ? ? ? A . n C 3 10 SER 10 298 ? ? ? A . n C 3 11 TYR 11 299 299 TYR TYR A . n C 3 12 VAL 12 300 300 VAL VAL A . n C 3 13 MET 13 301 301 MET MET A . n C 3 14 CYS 14 302 302 CYS CYS A . n C 3 15 THR 15 303 303 THR THR A . n C 3 16 GLY 16 304 304 GLY GLY A . n C 3 17 SER 17 305 305 SER SER A . n C 3 18 PHE 18 306 306 PHE PHE A . n C 3 19 LYS 19 307 307 LYS LYS A . n C 3 20 LEU 20 308 308 LEU LEU A . n C 3 21 GLU 21 309 309 GLU GLU A . n C 3 22 LYS 22 310 310 LYS LYS A . n C 3 23 GLU 23 311 311 GLU GLU A . n C 3 24 VAL 24 312 312 VAL VAL A . n C 3 25 ALA 25 313 313 ALA ALA A . n C 3 26 GLU 26 314 314 GLU GLU A . n C 3 27 THR 27 315 315 THR THR A . n C 3 28 GLN 28 316 316 GLN GLN A . n C 3 29 HIS 29 317 317 HIS HIS A . n C 3 30 GLY 30 318 318 GLY GLY A . n C 3 31 THR 31 319 319 THR THR A . n C 3 32 VAL 32 320 320 VAL VAL A . n C 3 33 LEU 33 321 321 LEU LEU A . n C 3 34 VAL 34 322 322 VAL VAL A . n C 3 35 GLN 35 323 323 GLN GLN A . n C 3 36 VAL 36 324 324 VAL VAL A . n C 3 37 LYS 37 325 325 LYS LYS A . n C 3 38 TYR 38 326 326 TYR TYR A . n C 3 39 GLU 39 327 327 GLU GLU A . n C 3 40 GLY 40 328 328 GLY GLY A . n C 3 41 THR 41 329 329 THR THR A . n C 3 42 ASP 42 330 330 ASP ASP A . n C 3 43 ALA 43 331 331 ALA ALA A . n C 3 44 PRO 44 332 332 PRO PRO A . n C 3 45 CYS 45 333 333 CYS CYS A . n C 3 46 LYS 46 334 334 LYS LYS A . n C 3 47 ILE 47 335 335 ILE ILE A . n C 3 48 PRO 48 336 336 PRO PRO A . n C 3 49 PHE 49 337 337 PHE PHE A . n C 3 50 SER 50 338 338 SER SER A . n C 3 51 THR 51 339 339 THR THR A . n C 3 52 GLN 52 340 340 GLN GLN A . n C 3 53 ASP 53 341 341 ASP ASP A . n C 3 54 GLU 54 342 342 GLU GLU A . n C 3 55 LYS 55 343 343 LYS LYS A . n C 3 56 GLY 56 344 344 GLY GLY A . n C 3 57 ALA 57 345 345 ALA ALA A . n C 3 58 THR 58 346 346 THR THR A . n C 3 59 GLN 59 347 347 GLN GLN A . n C 3 60 ASN 60 348 348 ASN ASN A . n C 3 61 GLY 61 349 349 GLY GLY A . n C 3 62 ARG 62 350 350 ARG ARG A . n C 3 63 LEU 63 351 351 LEU LEU A . n C 3 64 ILE 64 352 352 ILE ILE A . n C 3 65 THR 65 353 353 THR THR A . n C 3 66 ALA 66 354 354 ALA ALA A . n C 3 67 ASN 67 355 355 ASN ASN A . n C 3 68 PRO 68 356 356 PRO PRO A . n C 3 69 ILE 69 357 357 ILE ILE A . n C 3 70 VAL 70 358 358 VAL VAL A . n C 3 71 THR 71 359 359 THR THR A . n C 3 72 ASP 72 360 360 ASP ASP A . n C 3 73 LYS 73 361 361 LYS LYS A . n C 3 74 GLU 74 362 362 GLU GLU A . n C 3 75 LYS 75 363 363 LYS LYS A . n C 3 76 PRO 76 364 364 PRO PRO A . n C 3 77 VAL 77 365 365 VAL VAL A . n C 3 78 ASN 78 366 366 ASN ASN A . n C 3 79 ILE 79 367 367 ILE ILE A . n C 3 80 GLU 80 368 368 GLU GLU A . n C 3 81 ALA 81 369 369 ALA ALA A . n C 3 82 GLU 82 370 370 GLU GLU A . n C 3 83 PRO 83 371 371 PRO PRO A . n C 3 84 PRO 84 372 372 PRO PRO A . n C 3 85 PHE 85 373 373 PHE PHE A . n C 3 86 GLY 86 374 374 GLY GLY A . n C 3 87 GLU 87 375 375 GLU GLU A . n C 3 88 SER 88 376 376 SER SER A . n C 3 89 TYR 89 377 377 TYR TYR A . n C 3 90 ILE 90 378 378 ILE ILE A . n C 3 91 VAL 91 379 379 VAL VAL A . n C 3 92 VAL 92 380 380 VAL VAL A . n C 3 93 GLY 93 381 381 GLY GLY A . n C 3 94 ALA 94 382 382 ALA ALA A . n C 3 95 GLY 95 383 383 GLY GLY A . n C 3 96 GLU 96 384 384 GLU GLU A . n C 3 97 LYS 97 385 385 LYS LYS A . n C 3 98 ALA 98 386 386 ALA ALA A . n C 3 99 LEU 99 387 387 LEU LEU A . n C 3 100 LYS 100 388 388 LYS LYS A . n C 3 101 LEU 101 389 389 LEU LEU A . n C 3 102 SER 102 390 390 SER SER A . n C 3 103 TRP 103 391 391 TRP TRP A . n C 3 104 PHE 104 392 392 PHE PHE A . n C 3 105 LYS 105 393 393 LYS LYS A . n C 3 106 LYS 106 394 394 LYS LYS A . n C 3 107 GLY 107 395 395 GLY GLY A . n C 3 108 SER 108 396 ? ? ? A . n C 3 109 SER 109 397 ? ? ? A . n C 3 110 ILE 110 398 ? ? ? A . n C 3 111 GLY 111 399 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3720 ? 1 MORE -19 ? 1 'SSA (A^2)' 14430 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-06-20 2 'Structure model' 1 1 2012-10-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_phasing_MR.entry_id 4FFY _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.720 _pdbx_phasing_MR.d_res_low_rotation 28.510 _pdbx_phasing_MR.d_res_high_translation 2.720 _pdbx_phasing_MR.d_res_low_translation 28.510 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.7.3_928 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA L 51 ? ? 72.88 -41.75 2 1 GLU L 68 ? ? 59.17 -84.91 3 1 TRP H 103 ? ? -109.77 -101.18 4 1 ALA A 354 ? ? -51.38 -78.97 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L GLY 109 ? A GLY 113 2 1 Y 1 L GLY 110 ? A GLY 114 3 1 Y 1 L GLY 111 ? A GLY 115 4 1 Y 1 L SER 112 ? A SER 116 5 1 Y 1 L GLY 113 ? A GLY 117 6 1 Y 1 L GLY 114 ? A GLY 118 7 1 Y 1 L GLY 115 ? A GLY 119 8 1 Y 1 L GLY 116 ? A GLY 120 9 1 Y 1 L SER 117 ? A SER 121 10 1 Y 1 L GLY 118 ? A GLY 122 11 1 Y 1 L GLY 119 ? A GLY 123 12 1 Y 1 L GLY 120 ? A GLY 124 13 1 Y 1 L GLY 121 ? A GLY 125 14 1 Y 1 L SER 122 ? A SER 126 15 1 Y 1 H ALA 120 ? B ALA 120 16 1 Y 1 H SER 121 ? B SER 121 17 1 Y 1 H GLY 122 ? B GLY 122 18 1 Y 1 H ALA 123 ? B ALA 123 19 1 Y 1 H ASP 124 ? B ASP 124 20 1 Y 1 H HIS 125 ? B HIS 125 21 1 Y 1 H HIS 126 ? B HIS 126 22 1 Y 1 H HIS 127 ? B HIS 127 23 1 Y 1 H HIS 128 ? B HIS 128 24 1 Y 1 H HIS 129 ? B HIS 129 25 1 Y 1 H HIS 130 ? B HIS 130 26 1 Y 1 A MET 289 ? C MET 1 27 1 Y 1 A ALA 290 ? C ALA 2 28 1 Y 1 A SER 291 ? C SER 3 29 1 Y 1 A MET 292 ? C MET 4 30 1 Y 1 A THR 293 ? C THR 5 31 1 Y 1 A LEU 294 ? C LEU 6 32 1 Y 1 A LYS 295 ? C LYS 7 33 1 Y 1 A GLY 296 ? C GLY 8 34 1 Y 1 A MET 297 ? C MET 9 35 1 Y 1 A SER 298 ? C SER 10 36 1 Y 1 A SER 396 ? C SER 108 37 1 Y 1 A SER 397 ? C SER 109 38 1 Y 1 A ILE 398 ? C ILE 110 39 1 Y 1 A GLY 399 ? C GLY 111 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 GLYCEROL GOL 5 'CHLORIDE ION' CL 6 'SULFATE ION' SO4 7 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL 1 301 301 GOL GOL L . E 5 CL 1 302 1 CL CL L . F 5 CL 1 303 3 CL CL L . G 5 CL 1 304 4 CL CL L . H 6 SO4 1 201 1 SO4 SO4 H . I 5 CL 1 202 2 CL CL H . J 7 HOH 1 401 3 HOH HOH L . J 7 HOH 2 402 5 HOH HOH L . J 7 HOH 3 403 7 HOH HOH L . J 7 HOH 4 404 10 HOH HOH L . J 7 HOH 5 405 12 HOH HOH L . J 7 HOH 6 406 17 HOH HOH L . J 7 HOH 7 407 19 HOH HOH L . J 7 HOH 8 408 20 HOH HOH L . J 7 HOH 9 409 21 HOH HOH L . J 7 HOH 10 410 22 HOH HOH L . J 7 HOH 11 411 23 HOH HOH L . J 7 HOH 12 412 24 HOH HOH L . J 7 HOH 13 413 27 HOH HOH L . J 7 HOH 14 414 29 HOH HOH L . J 7 HOH 15 415 31 HOH HOH L . J 7 HOH 16 416 33 HOH HOH L . J 7 HOH 17 417 35 HOH HOH L . J 7 HOH 18 418 36 HOH HOH L . J 7 HOH 19 419 39 HOH HOH L . J 7 HOH 20 420 41 HOH HOH L . J 7 HOH 21 421 45 HOH HOH L . J 7 HOH 22 422 53 HOH HOH L . J 7 HOH 23 423 57 HOH HOH L . J 7 HOH 24 424 59 HOH HOH L . J 7 HOH 25 425 65 HOH HOH L . J 7 HOH 26 426 66 HOH HOH L . J 7 HOH 27 427 67 HOH HOH L . J 7 HOH 28 428 74 HOH HOH L . J 7 HOH 29 429 75 HOH HOH L . J 7 HOH 30 430 80 HOH HOH L . J 7 HOH 31 431 81 HOH HOH L . J 7 HOH 32 432 84 HOH HOH L . J 7 HOH 33 433 85 HOH HOH L . J 7 HOH 34 434 88 HOH HOH L . J 7 HOH 35 435 95 HOH HOH L . J 7 HOH 36 436 97 HOH HOH L . J 7 HOH 37 437 98 HOH HOH L . J 7 HOH 38 438 101 HOH HOH L . J 7 HOH 39 439 102 HOH HOH L . J 7 HOH 40 440 106 HOH HOH L . J 7 HOH 41 441 107 HOH HOH L . J 7 HOH 42 442 108 HOH HOH L . J 7 HOH 43 443 109 HOH HOH L . J 7 HOH 44 444 111 HOH HOH L . J 7 HOH 45 445 115 HOH HOH L . J 7 HOH 46 446 116 HOH HOH L . J 7 HOH 47 447 118 HOH HOH L . J 7 HOH 48 448 122 HOH HOH L . J 7 HOH 49 449 123 HOH HOH L . J 7 HOH 50 450 126 HOH HOH L . J 7 HOH 51 451 127 HOH HOH L . J 7 HOH 52 452 130 HOH HOH L . J 7 HOH 53 453 134 HOH HOH L . J 7 HOH 54 454 135 HOH HOH L . J 7 HOH 55 455 136 HOH HOH L . K 7 HOH 1 301 1 HOH HOH H . K 7 HOH 2 302 2 HOH HOH H . K 7 HOH 3 303 8 HOH HOH H . K 7 HOH 4 304 11 HOH HOH H . K 7 HOH 5 305 13 HOH HOH H . K 7 HOH 6 306 14 HOH HOH H . K 7 HOH 7 307 15 HOH HOH H . K 7 HOH 8 308 18 HOH HOH H . K 7 HOH 9 309 25 HOH HOH H . K 7 HOH 10 310 30 HOH HOH H . K 7 HOH 11 311 34 HOH HOH H . K 7 HOH 12 312 37 HOH HOH H . K 7 HOH 13 313 40 HOH HOH H . K 7 HOH 14 314 42 HOH HOH H . K 7 HOH 15 315 43 HOH HOH H . K 7 HOH 16 316 46 HOH HOH H . K 7 HOH 17 317 48 HOH HOH H . K 7 HOH 18 318 49 HOH HOH H . K 7 HOH 19 319 51 HOH HOH H . K 7 HOH 20 320 52 HOH HOH H . K 7 HOH 21 321 58 HOH HOH H . K 7 HOH 22 322 62 HOH HOH H . K 7 HOH 23 323 63 HOH HOH H . K 7 HOH 24 324 69 HOH HOH H . K 7 HOH 25 325 71 HOH HOH H . K 7 HOH 26 326 72 HOH HOH H . K 7 HOH 27 327 76 HOH HOH H . K 7 HOH 28 328 77 HOH HOH H . K 7 HOH 29 329 78 HOH HOH H . K 7 HOH 30 330 82 HOH HOH H . K 7 HOH 31 331 83 HOH HOH H . K 7 HOH 32 332 86 HOH HOH H . K 7 HOH 33 333 91 HOH HOH H . K 7 HOH 34 334 94 HOH HOH H . K 7 HOH 35 335 96 HOH HOH H . K 7 HOH 36 336 103 HOH HOH H . K 7 HOH 37 337 104 HOH HOH H . K 7 HOH 38 338 113 HOH HOH H . K 7 HOH 39 339 114 HOH HOH H . K 7 HOH 40 340 117 HOH HOH H . K 7 HOH 41 341 121 HOH HOH H . K 7 HOH 42 342 124 HOH HOH H . K 7 HOH 43 343 129 HOH HOH H . K 7 HOH 44 344 133 HOH HOH H . K 7 HOH 45 345 138 HOH HOH H . L 7 HOH 1 401 4 HOH HOH A . L 7 HOH 2 402 6 HOH HOH A . L 7 HOH 3 403 9 HOH HOH A . L 7 HOH 4 404 16 HOH HOH A . L 7 HOH 5 405 26 HOH HOH A . L 7 HOH 6 406 28 HOH HOH A . L 7 HOH 7 407 32 HOH HOH A . L 7 HOH 8 408 38 HOH HOH A . L 7 HOH 9 409 44 HOH HOH A . L 7 HOH 10 410 47 HOH HOH A . L 7 HOH 11 411 50 HOH HOH A . L 7 HOH 12 412 54 HOH HOH A . L 7 HOH 13 413 55 HOH HOH A . L 7 HOH 14 414 56 HOH HOH A . L 7 HOH 15 415 60 HOH HOH A . L 7 HOH 16 416 61 HOH HOH A . L 7 HOH 17 417 64 HOH HOH A . L 7 HOH 18 418 68 HOH HOH A . L 7 HOH 19 419 70 HOH HOH A . L 7 HOH 20 420 73 HOH HOH A . L 7 HOH 21 421 79 HOH HOH A . L 7 HOH 22 422 87 HOH HOH A . L 7 HOH 23 423 89 HOH HOH A . L 7 HOH 24 424 90 HOH HOH A . L 7 HOH 25 425 92 HOH HOH A . L 7 HOH 26 426 93 HOH HOH A . L 7 HOH 27 427 99 HOH HOH A . L 7 HOH 28 428 100 HOH HOH A . L 7 HOH 29 429 105 HOH HOH A . L 7 HOH 30 430 112 HOH HOH A . L 7 HOH 31 431 119 HOH HOH A . L 7 HOH 32 432 120 HOH HOH A . L 7 HOH 33 433 125 HOH HOH A . L 7 HOH 34 434 128 HOH HOH A . L 7 HOH 35 435 131 HOH HOH A . L 7 HOH 36 436 132 HOH HOH A . L 7 HOH 37 437 137 HOH HOH A . L 7 HOH 38 438 139 HOH HOH A . #