HEADER CELL ADHESION/CELL INVASION 06-JUN-12 4FHO TITLE CRYSTAL STRUCTURE OF AN INTERNALIN C2 (INLC2) FROM LISTERIA TITLE 2 MONOCYTOGENES STR. 4B F2365 AT 1.90 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERNALIN C2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 30-260; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES SEROTYPE 4B STR. F2365; SOURCE 3 ORGANISM_TAXID: 265669; SOURCE 4 STRAIN: F2365; SOURCE 5 GENE: INLC2, LMOF2365_0281; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS LEUCINE RICH REPEAT, N DOMAIN, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, CELL ADHESION/CELL INVASION, CELL ADHESION-CELL INVASION KEYWDS 4 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 20-SEP-23 4FHO 1 REMARK REVDAT 3 01-FEB-23 4FHO 1 REMARK SEQADV REVDAT 2 15-NOV-17 4FHO 1 REMARK REVDAT 1 11-JUL-12 4FHO 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF AN INTERNALIN C2 (INLC2) FROM LISTERIA JRNL TITL 2 MONOCYTOGENES STR. 4B F2365 AT 1.90 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 3 NUMBER OF REFLECTIONS : 42189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2136 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2825 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.3350 REMARK 3 BIN FREE R VALUE SET COUNT : 148 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3375 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 143 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.62000 REMARK 3 B22 (A**2) : -1.62000 REMARK 3 B33 (A**2) : 2.43000 REMARK 3 B12 (A**2) : -0.81000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.134 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.802 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3453 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2123 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4750 ; 1.622 ; 2.003 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5380 ; 1.503 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 465 ; 5.967 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;49.808 ;28.594 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 599 ;12.726 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ; 7.341 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 635 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3798 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 500 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 260 REMARK 3 ORIGIN FOR THE GROUP (A): -14.6220 43.4480 0.0780 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.1768 REMARK 3 T33: 0.2832 T12: -0.0109 REMARK 3 T13: 0.0821 T23: -0.1775 REMARK 3 L TENSOR REMARK 3 L11: 2.5799 L22: 3.6141 REMARK 3 L33: 1.3381 L12: -0.2478 REMARK 3 L13: -0.6373 L23: -0.2768 REMARK 3 S TENSOR REMARK 3 S11: 0.1502 S12: -0.4820 S13: 0.5786 REMARK 3 S21: 0.4616 S22: 0.2383 S23: -0.1190 REMARK 3 S31: 0.0355 S32: 0.2075 S33: -0.3885 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 260 REMARK 3 ORIGIN FOR THE GROUP (A): -26.8640 37.3260 -24.5450 REMARK 3 T TENSOR REMARK 3 T11: 0.1961 T22: 0.2318 REMARK 3 T33: 0.2356 T12: -0.0251 REMARK 3 T13: -0.0949 T23: 0.1725 REMARK 3 L TENSOR REMARK 3 L11: 2.5790 L22: 3.6323 REMARK 3 L33: 1.0004 L12: 0.4114 REMARK 3 L13: -0.6087 L23: -0.7554 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: 0.5456 S13: 0.4000 REMARK 3 S21: -0.6065 S22: 0.3117 S23: 0.4893 REMARK 3 S31: 0.1861 S32: -0.1296 S33: -0.3978 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. SULFATE ION (SO4) FROM THE CRYSTALLIZATION REMARK 3 SOLUTION ARE MODELED. REMARK 4 REMARK 4 4FHO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072913. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98086 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42655 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 61.036 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.0 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.49700 REMARK 200 R SYM FOR SHELL (I) : 0.49700 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: 1H6U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.00M AMMONIUM SULFATE, 0.1M TRIS REMARK 280 HYDROCHLORIDE PH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.64233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.28467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.46350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 64.10583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 12.82117 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 31 REMARK 465 GLU A 32 REMARK 465 VAL A 33 REMARK 465 ARG A 34 REMARK 465 GLY B 0 REMARK 465 ALA B 31 REMARK 465 GLU B 32 REMARK 465 VAL B 33 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 34 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU B 166 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 83 47.41 -145.83 REMARK 500 LYS A 133 -41.73 77.63 REMARK 500 ASN A 174 -160.45 -122.82 REMARK 500 ASN A 196 -158.61 -130.16 REMARK 500 ALA A 215 33.54 -140.67 REMARK 500 ASP A 217 71.75 68.41 REMARK 500 ALA B 83 47.76 -144.98 REMARK 500 LYS B 133 -44.88 77.93 REMARK 500 ASN B 174 -160.40 -122.94 REMARK 500 ASN B 196 -159.44 -131.44 REMARK 500 ALA B 215 33.03 -141.79 REMARK 500 ASP B 217 71.01 67.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-423603 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 31-260 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4FHO A 31 260 UNP Q724E3 Q724E3_LISMF 31 260 DBREF 4FHO B 31 260 UNP Q724E3 Q724E3_LISMF 31 260 SEQADV 4FHO GLY A 0 UNP Q724E3 EXPRESSION TAG SEQADV 4FHO GLY B 0 UNP Q724E3 EXPRESSION TAG SEQRES 1 A 231 GLY ALA GLU VAL ARG ALA GLU SER ILE ALA GLN PRO THR SEQRES 2 A 231 PRO ILE ASN VAL ILE PHE PRO ASP PRO ALA LEU ALA ASN SEQRES 3 A 231 ALA VAL LYS THR ALA THR GLY LYS SER ASN VAL THR ASP SEQRES 4 A 231 ALA VAL THR GLN ALA ASP LEU ASP GLY ILE ALA THR LEU SEQRES 5 A 231 SER ALA PHE ASN THR GLY VAL THR THR ILE GLU GLY ILE SEQRES 6 A 231 GLN TYR LEU ASN ASN LEU ILE GLY LEU GLU LEU LYS ASP SEQRES 7 A 231 ASN GLN ILE THR ASP LEU THR PRO LEU LYS ASN LEU THR SEQRES 8 A 231 LYS ILE THR GLU LEU GLU LEU SER GLY ASN PRO LEU LYS SEQRES 9 A 231 ASN VAL SER ALA ILE ALA GLY LEU GLN SER ILE LYS THR SEQRES 10 A 231 LEU ASP LEU THR SER THR GLN ILE THR ASP VAL THR PRO SEQRES 11 A 231 LEU ALA GLY LEU SER ASN LEU GLN VAL LEU TYR LEU ASP SEQRES 12 A 231 LEU ASN GLN ILE THR ASN ILE SER PRO LEU ALA GLY LEU SEQRES 13 A 231 THR ASN LEU GLN TYR LEU SER ILE GLY ASN ASN GLN VAL SEQRES 14 A 231 ASN ASP LEU THR PRO LEU ALA ASN LEU SER LYS LEU THR SEQRES 15 A 231 THR LEU ARG ALA ASP ASP ASN LYS ILE SER ASP ILE SER SEQRES 16 A 231 PRO LEU ALA SER LEU PRO ASN LEU ILE GLU VAL HIS LEU SEQRES 17 A 231 LYS ASP ASN GLN ILE SER ASP VAL SER PRO LEU ALA ASN SEQRES 18 A 231 LEU SER ASN LEU PHE ILE VAL THR LEU THR SEQRES 1 B 231 GLY ALA GLU VAL ARG ALA GLU SER ILE ALA GLN PRO THR SEQRES 2 B 231 PRO ILE ASN VAL ILE PHE PRO ASP PRO ALA LEU ALA ASN SEQRES 3 B 231 ALA VAL LYS THR ALA THR GLY LYS SER ASN VAL THR ASP SEQRES 4 B 231 ALA VAL THR GLN ALA ASP LEU ASP GLY ILE ALA THR LEU SEQRES 5 B 231 SER ALA PHE ASN THR GLY VAL THR THR ILE GLU GLY ILE SEQRES 6 B 231 GLN TYR LEU ASN ASN LEU ILE GLY LEU GLU LEU LYS ASP SEQRES 7 B 231 ASN GLN ILE THR ASP LEU THR PRO LEU LYS ASN LEU THR SEQRES 8 B 231 LYS ILE THR GLU LEU GLU LEU SER GLY ASN PRO LEU LYS SEQRES 9 B 231 ASN VAL SER ALA ILE ALA GLY LEU GLN SER ILE LYS THR SEQRES 10 B 231 LEU ASP LEU THR SER THR GLN ILE THR ASP VAL THR PRO SEQRES 11 B 231 LEU ALA GLY LEU SER ASN LEU GLN VAL LEU TYR LEU ASP SEQRES 12 B 231 LEU ASN GLN ILE THR ASN ILE SER PRO LEU ALA GLY LEU SEQRES 13 B 231 THR ASN LEU GLN TYR LEU SER ILE GLY ASN ASN GLN VAL SEQRES 14 B 231 ASN ASP LEU THR PRO LEU ALA ASN LEU SER LYS LEU THR SEQRES 15 B 231 THR LEU ARG ALA ASP ASP ASN LYS ILE SER ASP ILE SER SEQRES 16 B 231 PRO LEU ALA SER LEU PRO ASN LEU ILE GLU VAL HIS LEU SEQRES 17 B 231 LYS ASP ASN GLN ILE SER ASP VAL SER PRO LEU ALA ASN SEQRES 18 B 231 LEU SER ASN LEU PHE ILE VAL THR LEU THR HET SO4 A 600 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *143(H2 O) HELIX 1 1 ILE A 44 PHE A 48 1 5 HELIX 2 2 ASP A 50 THR A 61 1 12 HELIX 3 3 THR A 71 GLY A 77 1 7 HELIX 4 4 GLY A 93 LEU A 97 5 5 HELIX 5 5 LEU A 113 LYS A 117 5 5 HELIX 6 6 VAL A 135 ALA A 139 5 5 HELIX 7 7 VAL A 157 LEU A 163 5 7 HELIX 8 8 ILE A 179 ALA A 183 5 5 HELIX 9 9 LEU A 201 ALA A 205 5 5 HELIX 10 10 ILE A 223 LEU A 229 5 7 HELIX 11 11 VAL A 245 ALA A 249 5 5 HELIX 12 12 ILE B 44 PHE B 48 1 5 HELIX 13 13 ASP B 50 THR B 61 1 12 HELIX 14 14 THR B 71 GLY B 77 1 7 HELIX 15 15 GLY B 93 LEU B 97 5 5 HELIX 16 16 LEU B 113 LYS B 117 5 5 HELIX 17 17 VAL B 135 ALA B 139 5 5 HELIX 18 18 VAL B 157 LEU B 163 5 7 HELIX 19 19 ILE B 179 ALA B 183 5 5 HELIX 20 20 LEU B 201 ALA B 205 5 5 HELIX 21 21 ILE B 223 LEU B 229 5 7 HELIX 22 22 VAL B 245 ALA B 249 5 5 SHEET 1 A 2 THR A 42 PRO A 43 0 SHEET 2 A 2 ALA A 69 VAL A 70 -1 O VAL A 70 N THR A 42 SHEET 1 B 9 THR A 80 SER A 82 0 SHEET 2 B 9 GLY A 102 GLU A 104 1 O GLU A 104 N LEU A 81 SHEET 3 B 9 GLU A 124 GLU A 126 1 O GLU A 126 N LEU A 103 SHEET 4 B 9 THR A 146 ASP A 148 1 O THR A 146 N LEU A 125 SHEET 5 B 9 VAL A 168 TYR A 170 1 O VAL A 168 N LEU A 147 SHEET 6 B 9 TYR A 190 SER A 192 1 O TYR A 190 N LEU A 169 SHEET 7 B 9 THR A 212 ARG A 214 1 O THR A 212 N LEU A 191 SHEET 8 B 9 GLU A 234 HIS A 236 1 O HIS A 236 N LEU A 213 SHEET 9 B 9 ILE A 256 THR A 258 1 O ILE A 256 N VAL A 235 SHEET 1 C 2 THR B 42 PRO B 43 0 SHEET 2 C 2 ALA B 69 VAL B 70 -1 O VAL B 70 N THR B 42 SHEET 1 D 9 THR B 80 SER B 82 0 SHEET 2 D 9 GLY B 102 GLU B 104 1 O GLU B 104 N LEU B 81 SHEET 3 D 9 GLU B 124 GLU B 126 1 O GLU B 126 N LEU B 103 SHEET 4 D 9 THR B 146 ASP B 148 1 O THR B 146 N LEU B 125 SHEET 5 D 9 VAL B 168 TYR B 170 1 O VAL B 168 N LEU B 147 SHEET 6 D 9 TYR B 190 SER B 192 1 O TYR B 190 N LEU B 169 SHEET 7 D 9 THR B 212 ARG B 214 1 O THR B 212 N LEU B 191 SHEET 8 D 9 GLU B 234 HIS B 236 1 O HIS B 236 N LEU B 213 SHEET 9 D 9 ILE B 256 THR B 258 1 O ILE B 256 N VAL B 235 SITE 1 AC1 1 ARG A 214 CRYST1 115.795 115.795 76.927 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008636 0.004986 0.000000 0.00000 SCALE2 0.000000 0.009972 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012999 0.00000