HEADER TRANSFERASE 07-JUN-12 4FI1 TITLE CRYSTAL STRUCTURE OF SCCK2 ALPHA IN COMPLEX WITH ATP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CASEIN KINASE II SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CK II SUBUNIT ALPHA; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: CKA1, YIL035C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN-ATP COMPLEX, PROTEIN KINASE, PHOSPHORYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,H.WANG,M.TENG,X.LI REVDAT 3 28-FEB-24 4FI1 1 REMARK SEQADV LINK REVDAT 2 15-NOV-17 4FI1 1 REMARK REVDAT 1 19-JUN-13 4FI1 0 JRNL AUTH H.LIU,H.WANG,M.TENG,X.LI JRNL TITL CRYSTAL STRUCTURE OF SCCK2 ALPHA IN COMPLEX WITH ATP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 60.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 27225 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1452 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1774 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3070 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 141 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : 0.58000 REMARK 3 B33 (A**2) : -0.87000 REMARK 3 B12 (A**2) : 0.29000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.211 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.118 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.368 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3229 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4382 ; 1.188 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 374 ; 5.701 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;35.183 ;23.846 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 560 ;13.656 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;15.732 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 468 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2416 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4FI1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000072926. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29501 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 60.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLECULAR REPLACEMENT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4 MM MAGNESIUM CHLORIDE, 200 MM REMARK 280 AMMONIUM SULFATE, 100 MM MES (PH 6.2), 20% W/V POLYETHYLENE REMARK 280 GLYCOL 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.34267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 56.17133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 56.17133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 112.34267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -231.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -56.17133 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 LYS A 372 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CE REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 GLU A 27 OE1 OE2 REMARK 470 ILE A 31 CD1 REMARK 470 THR A 35 OG1 CG2 REMARK 470 ASN A 36 OD1 ND2 REMARK 470 THR A 37 OG1 CG2 REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 GLU A 41 OE1 REMARK 470 ILE A 42 CD1 REMARK 470 GLU A 43 CD OE1 OE2 REMARK 470 ARG A 48 NH1 NH2 REMARK 470 LYS A 50 CD CE NZ REMARK 470 GLU A 53 OE1 REMARK 470 GLN A 56 NE2 REMARK 470 LYS A 59 NZ REMARK 470 LEU A 60 CD2 REMARK 470 ASP A 61 OD1 OD2 REMARK 470 LYS A 63 CE NZ REMARK 470 LYS A 75 CE NZ REMARK 470 LYS A 76 CD CE NZ REMARK 470 LYS A 78 NZ REMARK 470 LYS A 111 CD CE NZ REMARK 470 GLU A 112 OE1 OE2 REMARK 470 ILE A 139 CD1 REMARK 470 PRO A 143 CG CD REMARK 470 ILE A 144 CG1 CG2 CD1 REMARK 470 LYS A 146 CG CD CE NZ REMARK 470 LYS A 206 NZ REMARK 470 LYS A 208 NZ REMARK 470 MET A 225 CE REMARK 470 ARG A 230 CZ NH1 NH2 REMARK 470 LYS A 286 CD CE NZ REMARK 470 ARG A 321 CZ NH1 NH2 REMARK 470 LYS A 328 CE NZ REMARK 470 GLN A 369 NE2 REMARK 470 GLU A 371 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 28 44.72 -100.22 REMARK 500 GLU A 43 -140.51 -99.43 REMARK 500 TYR A 106 -62.00 -99.87 REMARK 500 ASN A 128 30.34 -97.61 REMARK 500 LYS A 146 16.57 57.47 REMARK 500 ASP A 195 43.55 -146.20 REMARK 500 ASP A 214 79.18 60.19 REMARK 500 ALA A 232 -165.68 60.75 REMARK 500 MET A 247 55.58 -91.85 REMARK 500 ASP A 249 -158.77 -151.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 200 OD1 REMARK 620 2 ASP A 214 OD2 87.8 REMARK 620 3 ATP A 403 O3B 174.0 88.5 REMARK 620 4 ATP A 403 O1A 91.5 96.8 93.6 REMARK 620 5 ATP A 403 O3G 93.8 85.1 81.2 174.4 REMARK 620 6 HOH A 622 O 88.9 174.1 94.4 88.1 90.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 523 O REMARK 620 2 HOH A 554 O 137.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FI0 RELATED DB: PDB REMARK 900 RELATED ID: 4FI1 RELATED DB: PDB DBREF 4FI1 A 1 372 UNP P15790 CSK21_YEAST 1 372 SEQADV 4FI1 GLY A -1 UNP P15790 EXPRESSION TAG SEQADV 4FI1 HIS A 0 UNP P15790 EXPRESSION TAG SEQRES 1 A 374 GLY HIS MET LYS CYS ARG VAL TRP SER GLU ALA ARG VAL SEQRES 2 A 374 TYR THR ASN ILE ASN LYS GLN ARG THR GLU GLU TYR TRP SEQRES 3 A 374 ASP TYR GLU ASN THR VAL ILE ASP TRP SER THR ASN THR SEQRES 4 A 374 LYS ASP TYR GLU ILE GLU ASN LYS VAL GLY ARG GLY LYS SEQRES 5 A 374 TYR SER GLU VAL PHE GLN GLY VAL LYS LEU ASP SER LYS SEQRES 6 A 374 VAL LYS ILE VAL ILE LYS MET LEU LYS PRO VAL LYS LYS SEQRES 7 A 374 LYS LYS ILE LYS ARG GLU ILE LYS ILE LEU THR ASP LEU SEQRES 8 A 374 SER ASN GLU LYS VAL PRO PRO THR THR LEU PRO PHE GLN SEQRES 9 A 374 LYS ASP GLN TYR TYR THR ASN GLN LYS GLU ASP VAL LEU SEQRES 10 A 374 LYS PHE ILE ARG PRO TYR ILE PHE ASP GLN PRO HIS ASN SEQRES 11 A 374 GLY HIS ALA ASN ILE ILE HIS LEU PHE ASP ILE ILE LYS SEQRES 12 A 374 ASP PRO ILE SER LYS THR PRO ALA LEU VAL PHE GLU TYR SEQRES 13 A 374 VAL ASP ASN VAL ASP PHE ARG ILE LEU TYR PRO LYS LEU SEQRES 14 A 374 THR ASP LEU GLU ILE ARG PHE TYR MET PHE GLU LEU LEU SEQRES 15 A 374 LYS ALA LEU ASP TYR CYS HIS SER MET GLY ILE MET HIS SEQRES 16 A 374 ARG ASP VAL LYS PRO HIS ASN VAL MET ILE ASP HIS LYS SEQRES 17 A 374 ASN LYS LYS LEU ARG LEU ILE ASP TRP GLY LEU ALA GLU SEQRES 18 A 374 PHE TYR HIS VAL ASN MET GLU TYR ASN VAL ARG VAL ALA SEQRES 19 A 374 SER ARG PHE PHE LYS GLY PRO GLU LEU LEU VAL ASP TYR SEQRES 20 A 374 ARG MET TYR ASP TYR SER LEU ASP LEU TRP SER PHE GLY SEQRES 21 A 374 THR MET LEU ALA SER MET ILE PHE LYS ARG GLU PRO PHE SEQRES 22 A 374 PHE HIS GLY THR SER ASN THR ASP GLN LEU VAL LYS ILE SEQRES 23 A 374 VAL LYS VAL LEU GLY THR SER ASP PHE GLU LYS TYR LEU SEQRES 24 A 374 LEU LYS TYR GLU ILE THR LEU PRO ARG GLU PHE TYR ASP SEQRES 25 A 374 MET ASP GLN TYR ILE ARG LYS PRO TRP HIS ARG PHE ILE SEQRES 26 A 374 ASN ASP GLY ASN LYS HIS LEU SER GLY ASN ASP GLU ILE SEQRES 27 A 374 ILE ASP LEU ILE ASP ASN LEU LEU ARG TYR ASP HIS GLN SEQRES 28 A 374 GLU ARG LEU THR ALA LYS GLU ALA MET GLY HIS PRO TRP SEQRES 29 A 374 PHE ALA PRO ILE ARG GLU GLN ILE GLU LYS HET MG A 401 1 HET MG A 402 1 HET ATP A 403 31 HET SO4 A 404 5 HET SO4 A 405 5 HET SO4 A 406 5 HET SO4 A 407 5 HET SO4 A 408 5 HET SO4 A 409 5 HETNAM MG MAGNESIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM SO4 SULFATE ION FORMUL 2 MG 2(MG 2+) FORMUL 4 ATP C10 H16 N5 O13 P3 FORMUL 5 SO4 6(O4 S 2-) FORMUL 11 HOH *141(H2 O) HELIX 1 1 ASN A 14 ARG A 19 1 6 HELIX 2 2 THR A 20 ASP A 25 1 6 HELIX 3 3 TYR A 26 THR A 29 5 4 HELIX 4 4 LYS A 75 GLU A 92 1 18 HELIX 5 5 PRO A 95 LEU A 99 5 5 HELIX 6 6 GLN A 102 TYR A 107 1 6 HELIX 7 7 LYS A 111 LYS A 116 1 6 HELIX 8 8 ASN A 128 ILE A 133 5 6 HELIX 9 9 ASP A 159 TYR A 164 1 6 HELIX 10 10 PRO A 165 LEU A 167 5 3 HELIX 11 11 THR A 168 MET A 189 1 22 HELIX 12 12 LYS A 197 HIS A 199 5 3 HELIX 13 13 HIS A 205 LYS A 208 5 4 HELIX 14 14 SER A 233 LYS A 237 5 5 HELIX 15 15 GLY A 238 VAL A 243 1 6 HELIX 16 16 TYR A 250 LYS A 267 1 18 HELIX 17 17 SER A 276 GLY A 289 1 14 HELIX 18 18 GLY A 289 TYR A 300 1 12 HELIX 19 19 PRO A 305 MET A 311 5 7 HELIX 20 20 PRO A 318 ILE A 323 5 6 HELIX 21 21 ASN A 327 GLY A 332 1 6 HELIX 22 22 ASN A 333 LEU A 344 1 12 HELIX 23 23 ASP A 347 ARG A 351 5 5 HELIX 24 24 THR A 353 GLY A 359 1 7 HELIX 25 25 HIS A 360 TRP A 362 5 3 HELIX 26 26 PHE A 363 GLN A 369 1 7 SHEET 1 A 5 TYR A 40 GLY A 49 0 SHEET 2 A 5 SER A 52 LYS A 59 -1 O GLN A 56 N ASN A 44 SHEET 3 A 5 VAL A 64 LEU A 71 -1 O VAL A 64 N LYS A 59 SHEET 4 A 5 PRO A 148 GLU A 153 -1 O LEU A 150 N LYS A 69 SHEET 5 A 5 LEU A 136 LYS A 141 -1 N PHE A 137 O VAL A 151 SHEET 1 B 2 ILE A 191 MET A 192 0 SHEET 2 B 2 GLU A 219 PHE A 220 -1 O GLU A 219 N MET A 192 SHEET 1 C 2 VAL A 201 ASP A 204 0 SHEET 2 C 2 LYS A 209 LEU A 212 -1 O ARG A 211 N MET A 202 LINK OD1 ASN A 200 MG MG A 401 1555 1555 2.20 LINK OD2 ASP A 214 MG MG A 401 1555 1555 2.07 LINK MG MG A 401 O3B ATP A 403 1555 1555 1.92 LINK MG MG A 401 O1A ATP A 403 1555 1555 1.95 LINK MG MG A 401 O3G ATP A 403 1555 1555 2.04 LINK MG MG A 401 O HOH A 622 1555 1555 2.06 LINK MG MG A 402 O HOH A 523 1555 1555 2.83 LINK MG MG A 402 O HOH A 554 1555 1555 2.95 CISPEP 1 GLU A 269 PRO A 270 0 -10.32 SITE 1 AC1 4 ASN A 200 ASP A 214 ATP A 403 HOH A 622 SITE 1 AC2 4 HIS A 187 ALA A 354 HOH A 523 HOH A 554 SITE 1 AC3 23 ARG A 48 GLY A 49 LYS A 50 TYR A 51 SITE 2 AC3 23 SER A 52 VAL A 54 VAL A 67 LYS A 69 SITE 3 AC3 23 ILE A 134 GLU A 153 VAL A 155 ASP A 195 SITE 4 AC3 23 HIS A 199 ASN A 200 MET A 202 ILE A 213 SITE 5 AC3 23 ASP A 214 MG A 401 SO4 A 407 HOH A 507 SITE 6 AC3 23 HOH A 548 HOH A 563 HOH A 622 SITE 1 AC4 5 ARG A 268 LYS A 317 ARG A 321 ASN A 324 SITE 2 AC4 5 ASP A 325 SITE 1 AC5 3 ARG A 161 LYS A 166 HOH A 613 SITE 1 AC6 5 ARG A 81 ARG A 194 ASN A 228 VAL A 231 SITE 2 AC6 5 HOH A 513 SITE 1 AC7 5 LYS A 197 HIS A 199 ATP A 403 HOH A 622 SITE 2 AC7 5 HOH A 632 SITE 1 AC8 3 ARG A 234 ASN A 277 HOH A 589 SITE 1 AC9 4 ARG A 316 PRO A 318 TRP A 319 HIS A 320 CRYST1 69.773 69.773 168.514 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014332 0.008275 0.000000 0.00000 SCALE2 0.000000 0.016549 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005934 0.00000