HEADER PROTEIN BINDING/TRANSFERASE 11-JUN-12 4FJ3 TITLE 14-3-3 ISOFORM ZETA IN COMPLEX WITH A DIPHOYPHORYLATED C-RAF PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN ZETA/DELTA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 1-230; COMPND 5 SYNONYM: PROTEIN KINASE C INHIBITOR PROTEIN 1, KCIP-1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RAF PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE; COMPND 9 CHAIN: P; COMPND 10 FRAGMENT: UNP RESIDUES 229-264; COMPND 11 SYNONYM: PROTO-ONCOGENE C-RAF, CRAF, RAF-1; COMPND 12 EC: 2.7.11.1; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YWHAZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 OTHER_DETAILS: SYNTHETIC PEPTIDE KEYWDS 14-3-3 FOLD, ALL ALPHA-HELICAL, ADAPTER PROTEIN, PROTEIN BINDING- KEYWDS 2 TRANSFERASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.OTTMANN,M.MOLZAN REVDAT 2 10-JUL-13 4FJ3 1 JRNL REVDAT 1 05-SEP-12 4FJ3 0 JRNL AUTH M.MOLZAN,C.OTTMANN JRNL TITL SYNERGISTIC BINDING OF THE PHOSPHORYLATED S233- AND JRNL TITL 2 S259-BINDING SITES OF C-RAF TO ONE 14-3-3ZETA DIMER JRNL REF J.MOL.BIOL. V. 423 486 2012 JRNL REFN ISSN 0022-2836 JRNL PMID 22922483 JRNL DOI 10.1016/J.JMB.2012.08.009 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0093 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 4.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 61868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3094 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4009 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.1430 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.1990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3609 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 587 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 1.03000 REMARK 3 B33 (A**2) : -0.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.150 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.113 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.167 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3860 ; 0.026 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5241 ; 1.724 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 503 ; 4.946 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 197 ;38.333 ;24.924 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;15.049 ;15.041 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;16.485 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 585 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2919 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10953 ; 4.498 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 588 ;18.412 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3784 ;13.826 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 300 5 REMARK 3 1 B 1 B 300 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 849 ; 0.200 ; 0.500 REMARK 3 LOOSE POSITIONAL 1 A (A): 786 ; 0.530 ; 5.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 849 ; 3.380 ; 2.000 REMARK 3 LOOSE THERMAL 1 A (A**2): 786 ; 4.970 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4FJ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-12. REMARK 100 THE RCSB ID CODE IS RCSB072961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9778 REMARK 200 MONOCHROMATOR : AL2/AL2 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61869 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.43600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.310 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-ACETATE PH 7.0, 0.8 M NAH2PO4 REMARK 280 AND 1.2 M K2HPO4 , VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.07000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.94500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.21500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 56.94500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.07000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.21500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 ALA A -3 REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 70 REMARK 465 GLY A 71 REMARK 465 ALA A 72 REMARK 465 ASP A 204 REMARK 465 THR A 205 REMARK 465 LEU A 206 REMARK 465 SER A 207 REMARK 465 GLU A 208 REMARK 465 GLU A 209 REMARK 465 GLY B -4 REMARK 465 ALA B -3 REMARK 465 MET B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 70 REMARK 465 GLY B 71 REMARK 465 ALA B 134 REMARK 465 GLY B 135 REMARK 465 ASP B 136 REMARK 465 ASP B 204 REMARK 465 THR B 205 REMARK 465 GLN P 229 REMARK 465 HIS P 236 REMARK 465 ALA P 237 REMARK 465 PHE P 238 REMARK 465 THR P 239 REMARK 465 PHE P 240 REMARK 465 ASN P 241 REMARK 465 THR P 242 REMARK 465 SER P 243 REMARK 465 SER P 244 REMARK 465 PRO P 245 REMARK 465 SER P 246 REMARK 465 SER P 247 REMARK 465 GLU P 248 REMARK 465 GLY P 249 REMARK 465 SER P 250 REMARK 465 LEU P 251 REMARK 465 SER P 252 REMARK 465 GLN P 253 REMARK 465 ARG P 254 REMARK 465 GLN P 255 REMARK 465 HIS P 264 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 3 NZ REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 GLU A 73 CG CD OE1 OE2 REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 LYS A 75 CD CE NZ REMARK 470 GLN A 76 CG CD OE1 NE2 REMARK 470 LYS A 103 NZ REMARK 470 LYS A 139 CD CE NZ REMARK 470 LYS A 158 NZ REMARK 470 GLU A 202 CG CD OE1 OE2 REMARK 470 LYS A 212 CE NZ REMARK 470 GLU B 5 CD OE1 OE2 REMARK 470 LYS B 68 CE NZ REMARK 470 GLU B 73 CG CD OE1 OE2 REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 LYS B 75 CE NZ REMARK 470 LYS B 103 CD CE REMARK 470 ASP B 137 CG OD1 OD2 REMARK 470 LYS B 157 NZ REMARK 470 GLU B 202 CG CD OE1 OE2 REMARK 470 GLU B 208 CG CD OE1 OE2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 LYS B 212 CG CD CE NZ REMARK 470 SER B 230 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 15 O HOH B 566 2.06 REMARK 500 CD1 LEU A 216 O HOH A 389 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 27 CE LYS A 27 NZ -0.161 REMARK 500 PHE A 174 CZ PHE A 174 CE2 0.130 REMARK 500 LYS B 27 CE LYS B 27 NZ -0.163 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 203 CB - CG - CD2 ANGL. DEV. = -11.1 DEGREES REMARK 500 ARG B 83 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 LEU B 90 CB - CG - CD1 ANGL. DEV. = 10.3 DEGREES REMARK 500 LEU B 90 CB - CG - CD2 ANGL. DEV. = -13.7 DEGREES REMARK 500 ARG B 167 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 137 36.12 -92.84 REMARK 500 SER A 184 72.18 -119.97 REMARK 500 PHE B 104 -53.75 -128.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3IQJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN 14-3-3 SIGMA IN COMPLEX WITH REMARK 900 RAF1 PEPTIDE (10MER) REMARK 900 RELATED ID: 3NKX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN 14-3-3 ZETA IN COMPLEX WITH RAF1 REMARK 900 PEPTIDE (10MER) REMARK 900 RELATED ID: 1A4O RELATED DB: PDB REMARK 900 14-3-3 PROTEIN ZETA ISOFORM DBREF 4FJ3 A 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 4FJ3 B 1 230 UNP P63104 1433Z_HUMAN 1 230 DBREF 4FJ3 P 229 264 UNP P04049 RAF1_HUMAN 229 264 SEQADV 4FJ3 GLY A -4 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 ALA A -3 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 MET A -2 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 GLY A -1 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 SER A 0 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 GLY B -4 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 ALA B -3 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 MET B -2 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 GLY B -1 UNP P63104 EXPRESSION TAG SEQADV 4FJ3 SER B 0 UNP P63104 EXPRESSION TAG SEQRES 1 A 235 GLY ALA MET GLY SER MET ASP LYS ASN GLU LEU VAL GLN SEQRES 2 A 235 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP SEQRES 3 A 235 MET ALA ALA CYS MET LYS SER VAL THR GLU GLN GLY ALA SEQRES 4 A 235 GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 A 235 TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP ARG SEQRES 6 A 235 VAL VAL SER SER ILE GLU GLN LYS THR GLU GLY ALA GLU SEQRES 7 A 235 LYS LYS GLN GLN MET ALA ARG GLU TYR ARG GLU LYS ILE SEQRES 8 A 235 GLU THR GLU LEU ARG ASP ILE CYS ASN ASP VAL LEU SER SEQRES 9 A 235 LEU LEU GLU LYS PHE LEU ILE PRO ASN ALA SER GLN ALA SEQRES 10 A 235 GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP TYR SEQRES 11 A 235 TYR ARG TYR LEU ALA GLU VAL ALA ALA GLY ASP ASP LYS SEQRES 12 A 235 LYS GLY ILE VAL ASP GLN SER GLN GLN ALA TYR GLN GLU SEQRES 13 A 235 ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR HIS SEQRES 14 A 235 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 A 235 TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SER SEQRES 16 A 235 LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU LEU SEQRES 17 A 235 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 A 235 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 A 235 SER SEQRES 1 B 235 GLY ALA MET GLY SER MET ASP LYS ASN GLU LEU VAL GLN SEQRES 2 B 235 LYS ALA LYS LEU ALA GLU GLN ALA GLU ARG TYR ASP ASP SEQRES 3 B 235 MET ALA ALA CYS MET LYS SER VAL THR GLU GLN GLY ALA SEQRES 4 B 235 GLU LEU SER ASN GLU GLU ARG ASN LEU LEU SER VAL ALA SEQRES 5 B 235 TYR LYS ASN VAL VAL GLY ALA ARG ARG SER SER TRP ARG SEQRES 6 B 235 VAL VAL SER SER ILE GLU GLN LYS THR GLU GLY ALA GLU SEQRES 7 B 235 LYS LYS GLN GLN MET ALA ARG GLU TYR ARG GLU LYS ILE SEQRES 8 B 235 GLU THR GLU LEU ARG ASP ILE CYS ASN ASP VAL LEU SER SEQRES 9 B 235 LEU LEU GLU LYS PHE LEU ILE PRO ASN ALA SER GLN ALA SEQRES 10 B 235 GLU SER LYS VAL PHE TYR LEU LYS MET LYS GLY ASP TYR SEQRES 11 B 235 TYR ARG TYR LEU ALA GLU VAL ALA ALA GLY ASP ASP LYS SEQRES 12 B 235 LYS GLY ILE VAL ASP GLN SER GLN GLN ALA TYR GLN GLU SEQRES 13 B 235 ALA PHE GLU ILE SER LYS LYS GLU MET GLN PRO THR HIS SEQRES 14 B 235 PRO ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE SEQRES 15 B 235 TYR TYR GLU ILE LEU ASN SER PRO GLU LYS ALA CYS SER SEQRES 16 B 235 LEU ALA LYS THR ALA PHE ASP GLU ALA ILE ALA GLU LEU SEQRES 17 B 235 ASP THR LEU SER GLU GLU SER TYR LYS ASP SER THR LEU SEQRES 18 B 235 ILE MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR SEQRES 19 B 235 SER SEQRES 1 P 36 GLN HIS ARG TYR SEP THR PRO HIS ALA PHE THR PHE ASN SEQRES 2 P 36 THR SER SER PRO SER SER GLU GLY SER LEU SER GLN ARG SEQRES 3 P 36 GLN ARG SER THR SEP THR PRO ASN VAL HIS MODRES 4FJ3 SEP P 233 SER PHOSPHOSERINE MODRES 4FJ3 SEP P 259 SER PHOSPHOSERINE HET SEP P 233 10 HET SEP P 259 10 HETNAM SEP PHOSPHOSERINE HETSYN SEP PHOSPHONOSERINE FORMUL 3 SEP 2(C3 H8 N O6 P) FORMUL 4 HOH *587(H2 O) HELIX 1 1 ASP A 2 ALA A 16 1 15 HELIX 2 2 ARG A 18 GLU A 31 1 14 HELIX 3 3 SER A 37 LYS A 68 1 32 HELIX 4 4 LYS A 74 PHE A 104 1 31 HELIX 5 5 PHE A 104 ALA A 109 1 6 HELIX 6 6 GLN A 111 VAL A 132 1 22 HELIX 7 7 LYS A 138 MET A 160 1 23 HELIX 8 8 HIS A 164 ILE A 181 1 18 HELIX 9 9 SER A 184 GLU A 202 1 19 HELIX 10 10 TYR A 211 SER A 230 1 20 HELIX 11 11 LYS B 3 ALA B 16 1 14 HELIX 12 12 ARG B 18 GLN B 32 1 15 HELIX 13 13 SER B 37 THR B 69 1 33 HELIX 14 14 GLU B 73 PHE B 104 1 32 HELIX 15 15 PHE B 104 ALA B 109 1 6 HELIX 16 16 GLN B 111 VAL B 132 1 22 HELIX 17 17 LYS B 138 MET B 160 1 23 HELIX 18 18 HIS B 164 ILE B 181 1 18 HELIX 19 19 SER B 184 GLU B 202 1 19 HELIX 20 20 SER B 207 GLU B 209 5 3 HELIX 21 21 SER B 210 SER B 230 1 21 LINK C TYR P 232 N SEP P 233 1555 1555 1.33 LINK C SEP P 233 N THR P 234 1555 1555 1.34 LINK C THR P 258 N SEP P 259 1555 1555 1.33 LINK C SEP P 259 N THR P 260 1555 1555 1.34 CRYST1 72.140 102.430 113.890 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013862 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009763 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008780 0.00000