HEADER METAL BINDING PROTEIN 19-JUN-12 4FNA TITLE STRUCTURE OF UNLIGANDED FHUD2 FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERRIC HYDROXAMATE RECEPTOR 2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 25-302; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: FHUD2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMTS57 KEYWDS CLASS III SOLUTE BINDING PROTEIN, TRANSPORT OF HYDROXAMATE KEYWDS 2 SIDEROPHORES, FHUCBG, MEMBRANE-BOUND, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.H.SHILTON,D.E.HEINRICHS REVDAT 3 13-SEP-23 4FNA 1 REMARK SEQADV REVDAT 2 04-JUN-14 4FNA 1 JRNL REVDAT 1 19-JUN-13 4FNA 0 JRNL AUTH K.J.PODKOWA,L.A.BRIERE,D.E.HEINRICHS,B.H.SHILTON JRNL TITL CRYSTAL AND SOLUTION STRUCTURE ANALYSIS OF FHUD2 FROM JRNL TITL 2 STAPHYLOCOCCUS AUREUS IN MULTIPLE UNLIGANDED CONFORMATIONS JRNL TITL 3 AND BOUND TO FERRIOXAMINE-B. JRNL REF BIOCHEMISTRY V. 53 2017 2014 JRNL REFN ISSN 0006-2960 JRNL PMID 24606332 JRNL DOI 10.1021/BI401349D REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 22125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.7148 - 6.9544 0.99 2775 166 0.1893 0.2269 REMARK 3 2 6.9544 - 5.5403 1.00 2739 115 0.2446 0.3254 REMARK 3 3 5.5403 - 4.8460 0.99 2690 114 0.2210 0.2948 REMARK 3 4 4.8460 - 4.4057 0.98 2619 138 0.2048 0.3066 REMARK 3 5 4.4057 - 4.0914 0.98 2588 131 0.2098 0.2539 REMARK 3 6 4.0914 - 3.8511 0.96 2569 135 0.2332 0.2919 REMARK 3 7 3.8511 - 3.6589 0.96 2530 137 0.2650 0.3760 REMARK 3 8 3.6589 - 3.5001 0.96 2538 141 0.2958 0.3508 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 141.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 124.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -23.41900 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : -23.41900 REMARK 3 B13 (A**2) : 46.83900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 6796 REMARK 3 ANGLE : 1.568 9143 REMARK 3 CHIRALITY : 0.086 971 REMARK 3 PLANARITY : 0.007 1143 REMARK 3 DIHEDRAL : 17.925 2595 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FNA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073112. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22690 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 24.714 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.22200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4FKM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M GLYCINE, 3.5 TO 3.8 M AMMONIUM REMARK 280 SULFATE, PH 3.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 103.75350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 81.40850 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 103.75350 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 81.40850 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 103.75350 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 81.40850 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 103.75350 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 81.40850 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 103.75350 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 81.40850 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 103.75350 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 81.40850 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 103.75350 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 81.40850 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 103.75350 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 103.75350 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 81.40850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 23 REMARK 465 SER A 24 REMARK 465 GLY B 23 REMARK 465 SER B 24 REMARK 465 GLY C 23 REMARK 465 SER C 24 REMARK 465 ASN C 25 REMARK 465 ASN C 26 REMARK 465 LYS C 27 REMARK 465 ALA C 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 246 N LYS A 248 2.15 REMARK 500 O GLY C 198 N GLY C 200 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG B 49 O4 SO4 B 410 15454 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 37 -87.14 -126.71 REMARK 500 THR A 40 110.67 -162.47 REMARK 500 ALA A 58 -72.99 -44.08 REMARK 500 LYS A 103 75.01 35.90 REMARK 500 ASP A 115 36.91 -89.57 REMARK 500 LYS A 134 -136.97 -93.19 REMARK 500 LYS A 148 49.14 -79.80 REMARK 500 ASN A 196 26.31 -75.67 REMARK 500 ALA A 223 152.84 176.53 REMARK 500 THR A 250 99.65 42.50 REMARK 500 GLU A 254 -5.72 54.35 REMARK 500 SER A 255 -166.19 57.15 REMARK 500 THR A 256 59.10 -162.68 REMARK 500 ASN A 257 -82.00 -55.22 REMARK 500 HIS A 269 30.28 -92.26 REMARK 500 TYR A 278 38.42 -82.51 REMARK 500 LYS B 27 108.70 -55.02 REMARK 500 ASP B 37 -91.16 -125.54 REMARK 500 LYS B 39 37.17 -98.79 REMARK 500 THR B 40 106.45 -161.34 REMARK 500 ALA B 58 -70.55 -42.23 REMARK 500 LYS B 79 -17.35 -44.00 REMARK 500 LYS B 103 63.57 38.82 REMARK 500 ASP B 115 37.29 -88.35 REMARK 500 LYS B 134 -141.65 -92.08 REMARK 500 LYS B 148 45.96 -80.46 REMARK 500 TRP B 197 -158.52 -48.02 REMARK 500 GLN B 230 -19.54 -49.26 REMARK 500 SER B 245 67.55 77.62 REMARK 500 THR B 250 124.71 -39.10 REMARK 500 THR B 256 97.93 -162.41 REMARK 500 ASN B 257 95.60 -170.24 REMARK 500 MET B 258 -19.79 63.46 REMARK 500 HIS B 269 34.70 -87.11 REMARK 500 TYR B 278 32.08 -77.84 REMARK 500 TRP B 279 30.80 36.94 REMARK 500 THR C 30 49.55 -103.38 REMARK 500 ASP C 37 -85.53 -128.54 REMARK 500 LYS C 39 41.86 -104.36 REMARK 500 LYS C 103 78.63 40.55 REMARK 500 ASP C 115 36.00 -89.07 REMARK 500 LYS C 134 -140.42 -78.40 REMARK 500 LYS C 148 45.44 -77.10 REMARK 500 TRP C 197 -83.45 -97.76 REMARK 500 ARG C 199 45.40 -21.41 REMARK 500 TYR C 205 -62.65 -100.49 REMARK 500 SER C 245 64.34 60.65 REMARK 500 THR C 250 144.37 -12.54 REMARK 500 PRO C 251 28.95 -76.71 REMARK 500 GLU C 254 -100.70 63.14 REMARK 500 REMARK 500 THIS ENTRY HAS 57 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4FIL RELATED DB: PDB REMARK 900 STRUCTURE OF FHUD2 FROM STAPHYLOCOCCUS AUREUS WITH BOUND REMARK 900 FERRIOXAMINE B REMARK 900 RELATED ID: 4FKM RELATED DB: PDB REMARK 900 STRUCTURE OF UNLIGANDED AND REDUCTIVELY METHYLATED FHUD2 FROM REMARK 900 STAPHYLOCOCCUS AUREUS DBREF 4FNA A 25 302 UNP Q7BGA5 Q7BGA5_STAAU 25 302 DBREF 4FNA B 25 302 UNP Q7BGA5 Q7BGA5_STAAU 25 302 DBREF 4FNA C 25 302 UNP Q7BGA5 Q7BGA5_STAAU 25 302 SEQADV 4FNA GLY A 23 UNP Q7BGA5 EXPRESSION TAG SEQADV 4FNA SER A 24 UNP Q7BGA5 EXPRESSION TAG SEQADV 4FNA GLY B 23 UNP Q7BGA5 EXPRESSION TAG SEQADV 4FNA SER B 24 UNP Q7BGA5 EXPRESSION TAG SEQADV 4FNA GLY C 23 UNP Q7BGA5 EXPRESSION TAG SEQADV 4FNA SER C 24 UNP Q7BGA5 EXPRESSION TAG SEQRES 1 A 280 GLY SER ASN ASN LYS ALA GLU THR LYS SER TYR LYS MET SEQRES 2 A 280 ASP ASP GLY LYS THR VAL ASP ILE PRO LYS ASP PRO LYS SEQRES 3 A 280 ARG ILE ALA VAL VAL ALA PRO THR TYR ALA GLY GLY LEU SEQRES 4 A 280 LYS LYS LEU GLY ALA ASN ILE VAL ALA VAL ASN GLN GLN SEQRES 5 A 280 VAL ASP GLN SER LYS VAL LEU LYS ASP LYS PHE LYS GLY SEQRES 6 A 280 VAL THR LYS ILE GLY ASP GLY ASP VAL GLU LYS VAL ALA SEQRES 7 A 280 LYS GLU LYS PRO ASP LEU ILE ILE VAL TYR SER THR ASP SEQRES 8 A 280 LYS ASP ILE LYS LYS TYR GLN LYS VAL ALA PRO THR VAL SEQRES 9 A 280 VAL VAL ASP TYR ASN LYS HIS LYS TYR LEU GLU GLN GLN SEQRES 10 A 280 GLU MET LEU GLY LYS ILE VAL GLY LYS GLU ASP LYS VAL SEQRES 11 A 280 LYS ALA TRP LYS LYS ASP TRP GLU GLU THR THR ALA LYS SEQRES 12 A 280 ASP GLY LYS GLU ILE LYS LYS ALA ILE GLY GLN ASP ALA SEQRES 13 A 280 THR VAL SER LEU PHE ASP GLU PHE ASP LYS LYS LEU TYR SEQRES 14 A 280 THR TYR GLY ASP ASN TRP GLY ARG GLY GLY GLU VAL LEU SEQRES 15 A 280 TYR GLN ALA PHE GLY LEU LYS MET GLN PRO GLU GLN GLN SEQRES 16 A 280 LYS LEU THR ALA LYS ALA GLY TRP ALA GLU VAL LYS GLN SEQRES 17 A 280 GLU GLU ILE GLU LYS TYR ALA GLY ASP TYR ILE VAL SER SEQRES 18 A 280 THR SER GLU GLY LYS PRO THR PRO GLY TYR GLU SER THR SEQRES 19 A 280 ASN MET TRP LYS ASN LEU LYS ALA THR LYS GLU GLY HIS SEQRES 20 A 280 ILE VAL LYS VAL ASP ALA GLY THR TYR TRP TYR ASN ASP SEQRES 21 A 280 PRO TYR THR LEU ASP PHE MET ARG LYS ASP LEU LYS GLU SEQRES 22 A 280 LYS LEU ILE LYS ALA ALA LYS SEQRES 1 B 280 GLY SER ASN ASN LYS ALA GLU THR LYS SER TYR LYS MET SEQRES 2 B 280 ASP ASP GLY LYS THR VAL ASP ILE PRO LYS ASP PRO LYS SEQRES 3 B 280 ARG ILE ALA VAL VAL ALA PRO THR TYR ALA GLY GLY LEU SEQRES 4 B 280 LYS LYS LEU GLY ALA ASN ILE VAL ALA VAL ASN GLN GLN SEQRES 5 B 280 VAL ASP GLN SER LYS VAL LEU LYS ASP LYS PHE LYS GLY SEQRES 6 B 280 VAL THR LYS ILE GLY ASP GLY ASP VAL GLU LYS VAL ALA SEQRES 7 B 280 LYS GLU LYS PRO ASP LEU ILE ILE VAL TYR SER THR ASP SEQRES 8 B 280 LYS ASP ILE LYS LYS TYR GLN LYS VAL ALA PRO THR VAL SEQRES 9 B 280 VAL VAL ASP TYR ASN LYS HIS LYS TYR LEU GLU GLN GLN SEQRES 10 B 280 GLU MET LEU GLY LYS ILE VAL GLY LYS GLU ASP LYS VAL SEQRES 11 B 280 LYS ALA TRP LYS LYS ASP TRP GLU GLU THR THR ALA LYS SEQRES 12 B 280 ASP GLY LYS GLU ILE LYS LYS ALA ILE GLY GLN ASP ALA SEQRES 13 B 280 THR VAL SER LEU PHE ASP GLU PHE ASP LYS LYS LEU TYR SEQRES 14 B 280 THR TYR GLY ASP ASN TRP GLY ARG GLY GLY GLU VAL LEU SEQRES 15 B 280 TYR GLN ALA PHE GLY LEU LYS MET GLN PRO GLU GLN GLN SEQRES 16 B 280 LYS LEU THR ALA LYS ALA GLY TRP ALA GLU VAL LYS GLN SEQRES 17 B 280 GLU GLU ILE GLU LYS TYR ALA GLY ASP TYR ILE VAL SER SEQRES 18 B 280 THR SER GLU GLY LYS PRO THR PRO GLY TYR GLU SER THR SEQRES 19 B 280 ASN MET TRP LYS ASN LEU LYS ALA THR LYS GLU GLY HIS SEQRES 20 B 280 ILE VAL LYS VAL ASP ALA GLY THR TYR TRP TYR ASN ASP SEQRES 21 B 280 PRO TYR THR LEU ASP PHE MET ARG LYS ASP LEU LYS GLU SEQRES 22 B 280 LYS LEU ILE LYS ALA ALA LYS SEQRES 1 C 280 GLY SER ASN ASN LYS ALA GLU THR LYS SER TYR LYS MET SEQRES 2 C 280 ASP ASP GLY LYS THR VAL ASP ILE PRO LYS ASP PRO LYS SEQRES 3 C 280 ARG ILE ALA VAL VAL ALA PRO THR TYR ALA GLY GLY LEU SEQRES 4 C 280 LYS LYS LEU GLY ALA ASN ILE VAL ALA VAL ASN GLN GLN SEQRES 5 C 280 VAL ASP GLN SER LYS VAL LEU LYS ASP LYS PHE LYS GLY SEQRES 6 C 280 VAL THR LYS ILE GLY ASP GLY ASP VAL GLU LYS VAL ALA SEQRES 7 C 280 LYS GLU LYS PRO ASP LEU ILE ILE VAL TYR SER THR ASP SEQRES 8 C 280 LYS ASP ILE LYS LYS TYR GLN LYS VAL ALA PRO THR VAL SEQRES 9 C 280 VAL VAL ASP TYR ASN LYS HIS LYS TYR LEU GLU GLN GLN SEQRES 10 C 280 GLU MET LEU GLY LYS ILE VAL GLY LYS GLU ASP LYS VAL SEQRES 11 C 280 LYS ALA TRP LYS LYS ASP TRP GLU GLU THR THR ALA LYS SEQRES 12 C 280 ASP GLY LYS GLU ILE LYS LYS ALA ILE GLY GLN ASP ALA SEQRES 13 C 280 THR VAL SER LEU PHE ASP GLU PHE ASP LYS LYS LEU TYR SEQRES 14 C 280 THR TYR GLY ASP ASN TRP GLY ARG GLY GLY GLU VAL LEU SEQRES 15 C 280 TYR GLN ALA PHE GLY LEU LYS MET GLN PRO GLU GLN GLN SEQRES 16 C 280 LYS LEU THR ALA LYS ALA GLY TRP ALA GLU VAL LYS GLN SEQRES 17 C 280 GLU GLU ILE GLU LYS TYR ALA GLY ASP TYR ILE VAL SER SEQRES 18 C 280 THR SER GLU GLY LYS PRO THR PRO GLY TYR GLU SER THR SEQRES 19 C 280 ASN MET TRP LYS ASN LEU LYS ALA THR LYS GLU GLY HIS SEQRES 20 C 280 ILE VAL LYS VAL ASP ALA GLY THR TYR TRP TYR ASN ASP SEQRES 21 C 280 PRO TYR THR LEU ASP PHE MET ARG LYS ASP LEU LYS GLU SEQRES 22 C 280 LYS LEU ILE LYS ALA ALA LYS HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 B 401 5 HET SO4 B 402 5 HET SO4 B 403 5 HET SO4 B 404 5 HET SO4 B 405 5 HET SO4 B 406 5 HET SO4 B 407 5 HET SO4 B 408 5 HET SO4 B 409 5 HET SO4 B 410 5 HET SO4 C 401 5 HETNAM SO4 SULFATE ION FORMUL 4 SO4 13(O4 S 2-) HELIX 1 1 ALA A 54 GLY A 65 1 12 HELIX 2 2 GLN A 74 GLN A 77 5 4 HELIX 3 3 SER A 78 PHE A 85 1 8 HELIX 4 4 ASP A 95 LYS A 101 1 7 HELIX 5 5 ASP A 115 ALA A 123 1 9 HELIX 6 6 ASP A 129 HIS A 133 5 5 HELIX 7 7 LEU A 136 VAL A 146 1 11 HELIX 8 8 LYS A 148 GLY A 175 1 28 HELIX 9 9 GLY A 200 TYR A 205 1 6 HELIX 10 10 GLN A 213 LYS A 218 1 6 HELIX 11 11 GLU A 232 ALA A 237 1 6 HELIX 12 12 LEU A 262 GLU A 267 1 6 HELIX 13 13 ASP A 274 TYR A 278 5 5 HELIX 14 14 ASP A 282 ALA A 301 1 20 HELIX 15 15 TYR B 57 GLY B 65 1 9 HELIX 16 16 GLN B 74 SER B 78 5 5 HELIX 17 17 LYS B 82 LYS B 86 5 5 HELIX 18 18 ASP B 95 LYS B 101 1 7 HELIX 19 19 ASP B 115 ALA B 123 1 9 HELIX 20 20 ASP B 129 HIS B 133 5 5 HELIX 21 21 LYS B 134 VAL B 146 1 13 HELIX 22 22 LYS B 148 GLY B 175 1 28 HELIX 23 23 ARG B 199 TYR B 205 1 7 HELIX 24 24 GLN B 213 LYS B 218 1 6 HELIX 25 25 LEU B 219 ALA B 221 5 3 HELIX 26 26 GLU B 232 ALA B 237 1 6 HELIX 27 27 MET B 258 ASN B 261 5 4 HELIX 28 28 LEU B 262 GLY B 268 1 7 HELIX 29 29 ASP B 282 ALA B 301 1 20 HELIX 30 30 TYR C 57 LEU C 64 1 8 HELIX 31 31 GLN C 74 SER C 78 5 5 HELIX 32 32 VAL C 80 PHE C 85 1 6 HELIX 33 33 ASP C 95 LYS C 101 1 7 HELIX 34 34 ASP C 115 ALA C 123 1 9 HELIX 35 35 ASP C 129 HIS C 133 5 5 HELIX 36 36 LEU C 136 VAL C 146 1 11 HELIX 37 37 LYS C 148 GLY C 175 1 28 HELIX 38 38 GLY C 200 TYR C 205 1 6 HELIX 39 39 GLN C 213 LYS C 218 1 6 HELIX 40 40 LEU C 219 ALA C 221 5 3 HELIX 41 41 LEU C 262 GLU C 267 1 6 HELIX 42 42 ASP C 282 ALA C 301 1 20 SHEET 1 A 2 THR A 30 TYR A 33 0 SHEET 2 A 2 VAL A 41 PRO A 44 -1 O VAL A 41 N TYR A 33 SHEET 1 B 5 THR A 89 ILE A 91 0 SHEET 2 B 5 ILE A 68 ASN A 72 1 N VAL A 71 O ILE A 91 SHEET 3 B 5 ILE A 50 VAL A 52 1 N VAL A 52 O ALA A 70 SHEET 4 B 5 LEU A 106 TYR A 110 1 O ILE A 108 N ALA A 51 SHEET 5 B 5 THR A 125 VAL A 128 1 O VAL A 128 N VAL A 109 SHEET 1 C 5 GLU A 227 VAL A 228 0 SHEET 2 C 5 LYS A 189 THR A 192 -1 N LEU A 190 O VAL A 228 SHEET 3 C 5 VAL A 180 PHE A 186 -1 N ASP A 184 O TYR A 191 SHEET 4 C 5 TYR A 240 THR A 244 1 O THR A 244 N PHE A 183 SHEET 5 C 5 ILE A 270 LYS A 272 1 O VAL A 271 N ILE A 241 SHEET 1 D 2 THR B 30 TYR B 33 0 SHEET 2 D 2 VAL B 41 PRO B 44 -1 O ILE B 43 N LYS B 31 SHEET 1 E 5 THR B 89 ILE B 91 0 SHEET 2 E 5 ILE B 68 ASN B 72 1 N VAL B 71 O ILE B 91 SHEET 3 E 5 ILE B 50 VAL B 52 1 N VAL B 52 O ALA B 70 SHEET 4 E 5 LEU B 106 TYR B 110 1 O LEU B 106 N ALA B 51 SHEET 5 E 5 THR B 125 VAL B 128 1 O VAL B 126 N ILE B 107 SHEET 1 F 4 LYS B 211 MET B 212 0 SHEET 2 F 4 THR B 179 PHE B 186 1 N VAL B 180 O LYS B 211 SHEET 3 F 4 LYS B 189 THR B 192 -1 O TYR B 191 N ASP B 184 SHEET 4 F 4 ALA B 226 VAL B 228 -1 O ALA B 226 N THR B 192 SHEET 1 G 4 LYS B 211 MET B 212 0 SHEET 2 G 4 THR B 179 PHE B 186 1 N VAL B 180 O LYS B 211 SHEET 3 G 4 TYR B 240 THR B 244 1 O TYR B 240 N SER B 181 SHEET 4 G 4 ILE B 270 LYS B 272 1 O VAL B 271 N SER B 243 SHEET 1 H 2 LYS C 31 TYR C 33 0 SHEET 2 H 2 VAL C 41 ILE C 43 -1 O VAL C 41 N TYR C 33 SHEET 1 I 5 THR C 89 ILE C 91 0 SHEET 2 I 5 ILE C 68 ASN C 72 1 N VAL C 71 O ILE C 91 SHEET 3 I 5 ILE C 50 VAL C 52 1 N VAL C 52 O ALA C 70 SHEET 4 I 5 LEU C 106 TYR C 110 1 O LEU C 106 N ALA C 51 SHEET 5 I 5 THR C 125 VAL C 128 1 O VAL C 126 N ILE C 107 SHEET 1 J 4 LYS C 211 MET C 212 0 SHEET 2 J 4 THR C 179 PHE C 186 1 N VAL C 180 O LYS C 211 SHEET 3 J 4 LYS C 189 THR C 192 -1 O TYR C 191 N ASP C 184 SHEET 4 J 4 ALA C 226 VAL C 228 -1 O VAL C 228 N LEU C 190 SHEET 1 K 4 LYS C 211 MET C 212 0 SHEET 2 K 4 THR C 179 PHE C 186 1 N VAL C 180 O LYS C 211 SHEET 3 K 4 TYR C 240 THR C 244 1 O THR C 244 N PHE C 183 SHEET 4 K 4 ILE C 270 LYS C 272 1 O VAL C 271 N ILE C 241 CISPEP 1 ALA A 221 LYS A 222 0 -23.51 SITE 1 AC1 4 LYS A 218 LYS B 218 GLU C 215 LYS C 218 SITE 1 AC2 3 ARG A 290 LYS A 291 LYS A 294 SITE 1 AC3 5 ASN B 72 GLN B 73 GLN B 74 GLY B 92 SITE 2 AC3 5 ASP B 93 SITE 1 AC4 3 LYS A 168 LYS B 168 LYS C 168 SITE 1 AC5 3 LYS A 211 LYS B 211 LYS C 211 SITE 1 AC6 3 LYS B 171 GLN B 176 LYS C 171 SITE 1 AC7 2 LYS B 222 ALA B 223 SITE 1 AC8 4 LYS A 263 GLU A 267 LYS B 134 GLN B 206 SITE 1 AC9 1 ARG B 290 SITE 1 BC1 5 TRP B 225 ALA B 226 GLU B 227 LYS C 189 SITE 2 BC1 5 GLU C 227 SITE 1 BC2 3 GLY B 87 LYS B 90 LYS C 82 SITE 1 BC3 2 ARG B 49 GLU B 102 SITE 1 BC4 5 THR C 179 GLN C 213 ALA C 237 GLY C 238 SITE 2 BC4 5 ASP C 239 CRYST1 207.507 207.507 162.817 90.00 90.00 90.00 I 4 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004819 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004819 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006142 0.00000