HEADER HYDROLASE 20-JUN-12 4FOL TITLE S-FORMYLGLUTATHIONE HYDROLASE VARIANT H160I COMPND MOL_ID: 1; COMPND 2 MOLECULE: S-FORMYLGLUTATHIONE HYDROLASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: FGH; COMPND 5 EC: 3.1.2.12; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: YJL068C, HRE299, J1102; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS D-TYPE ESTERASE, OXIDATION SENSOR MOTIF, ESTERASE ACTIVITY KEYWDS 2 ACTIVATION, ESTERASE ACTIVITY INHIBITION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.M.LEGLER,C.B.MILLARD REVDAT 3 13-SEP-23 4FOL 1 SEQADV REVDAT 2 03-OCT-12 4FOL 1 JRNL REVDAT 1 05-SEP-12 4FOL 0 JRNL AUTH P.M.LEGLER,D.H.LEARY,W.J.HERVEY,C.B.MILLARD JRNL TITL A ROLE FOR HIS-160 IN PEROXIDE INHIBITION OF S. CEREVISIAE JRNL TITL 2 S-FORMYLGLUTATHIONE HYDROLASE: EVIDENCE FOR AN OXIDATION JRNL TITL 3 SENSITIVE MOTIF. JRNL REF ARCH.BIOCHEM.BIOPHYS. V. 528 7 2012 JRNL REFN ISSN 0003-9861 JRNL PMID 22906720 JRNL DOI 10.1016/J.ABB.2012.08.001 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 61.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 71543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.283 REMARK 3 R VALUE (WORKING SET) : 0.281 REMARK 3 FREE R VALUE : 0.327 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3777 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2907 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 51.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.4150 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9060 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 183 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.316 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.255 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.825 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.770 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9340 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12666 ; 1.319 ; 1.937 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1116 ; 6.499 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 455 ;33.313 ;24.154 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1458 ;16.882 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;16.089 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1299 ; 0.110 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7287 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4FOL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1000073159. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75437 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 69.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 4.110 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.21080 REMARK 200 FOR THE DATA SET : 5.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1PV1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.17 M AMMONIUM ACETATE, 0.085 M REMARK 280 SODIUM ACETATE TRIHYDRATE, PH 4.6, 25.5% PEG4000, 15% GLYCEROL, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.15000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.60000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.87000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.60000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.15000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.87000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 42 REMARK 465 PHE A 43 REMARK 465 PRO A 44 REMARK 465 ARG A 45 REMARK 465 ASN A 46 REMARK 465 LYS A 47 REMARK 465 LYS A 143 REMARK 465 ASN A 144 REMARK 465 GLY A 145 REMARK 465 ASP A 146 REMARK 465 VAL A 147 REMARK 465 GLU A 208 REMARK 465 GLU A 209 REMARK 465 LYS A 210 REMARK 465 ALA A 211 REMARK 465 GLN A 212 REMARK 465 GLN B 41 REMARK 465 ASP B 42 REMARK 465 PHE B 43 REMARK 465 PRO B 44 REMARK 465 ARG B 45 REMARK 465 ASN B 46 REMARK 465 LYS B 47 REMARK 465 LYS B 143 REMARK 465 ASN B 144 REMARK 465 GLY B 145 REMARK 465 ASP B 146 REMARK 465 VAL B 147 REMARK 465 GLU B 209 REMARK 465 LYS B 210 REMARK 465 ALA B 211 REMARK 465 GLN B 212 REMARK 465 ASP C 42 REMARK 465 PHE C 43 REMARK 465 PRO C 44 REMARK 465 ARG C 45 REMARK 465 ASN C 46 REMARK 465 LYS C 47 REMARK 465 LYS C 143 REMARK 465 ASN C 144 REMARK 465 GLY C 145 REMARK 465 ASP C 146 REMARK 465 VAL C 147 REMARK 465 LYS C 148 REMARK 465 GLU C 208 REMARK 465 GLU C 209 REMARK 465 LYS C 210 REMARK 465 ALA C 211 REMARK 465 GLN C 212 REMARK 465 GLN D 41 REMARK 465 ASP D 42 REMARK 465 PHE D 43 REMARK 465 PRO D 44 REMARK 465 ARG D 45 REMARK 465 ASN D 46 REMARK 465 LYS D 47 REMARK 465 ARG D 48 REMARK 465 LYS D 143 REMARK 465 ASN D 144 REMARK 465 GLY D 145 REMARK 465 ASP D 146 REMARK 465 VAL D 147 REMARK 465 GLU D 209 REMARK 465 LYS D 210 REMARK 465 ALA D 211 REMARK 465 GLN D 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS B 227 NE2 HIS B 227 CD2 -0.089 REMARK 500 TRP D 262 NE1 TRP D 262 CE2 -0.086 REMARK 500 ASP D 275 CB ASP D 275 CG -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 10 -131.90 47.39 REMARK 500 THR A 59 -10.56 67.60 REMARK 500 ALA A 108 46.32 -159.16 REMARK 500 GLN A 124 50.79 -103.96 REMARK 500 LYS A 131 -64.72 -108.51 REMARK 500 ASP A 153 -78.19 -99.93 REMARK 500 SER A 161 -111.26 57.52 REMARK 500 ASP A 231 132.99 -39.67 REMARK 500 LEU A 248 -67.44 -104.69 REMARK 500 LYS B 5 139.00 -177.06 REMARK 500 CYS B 10 -129.45 44.62 REMARK 500 THR B 59 -19.88 70.83 REMARK 500 SER B 88 166.14 179.48 REMARK 500 ALA B 108 50.12 -152.44 REMARK 500 PHE B 110 17.58 46.53 REMARK 500 GLN B 124 57.43 -101.44 REMARK 500 LEU B 152 -40.97 -132.71 REMARK 500 ASP B 153 -63.35 -94.53 REMARK 500 SER B 161 -112.64 54.23 REMARK 500 ALA B 187 56.85 34.75 REMARK 500 LEU B 248 -68.50 -108.81 REMARK 500 ASP B 264 6.33 83.43 REMARK 500 CYS C 10 -133.67 51.01 REMARK 500 THR C 59 -16.68 78.09 REMARK 500 ALA C 108 53.01 -157.84 REMARK 500 HIS C 122 -31.25 -142.44 REMARK 500 GLN C 124 55.38 -101.26 REMARK 500 LYS C 131 -48.44 -134.28 REMARK 500 ASP C 153 -80.60 -101.52 REMARK 500 SER C 161 -105.43 56.61 REMARK 500 ALA C 187 55.74 36.16 REMARK 500 ASN C 191 79.66 -119.48 REMARK 500 GLU C 245 -39.74 91.47 REMARK 500 LYS D 5 148.11 -174.36 REMARK 500 CYS D 10 -125.34 44.15 REMARK 500 THR D 59 -12.91 72.76 REMARK 500 ALA D 108 55.68 -153.28 REMARK 500 GLN D 124 58.27 -104.54 REMARK 500 LYS D 131 -64.93 -106.99 REMARK 500 ASP D 153 -87.03 -104.00 REMARK 500 SER D 161 -103.79 55.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN D 116 GLU D 117 -143.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PV1 RELATED DB: PDB REMARK 900 S-FORMYLGLUTATHIONE HYDROLASE REMARK 900 RELATED ID: 3C6B RELATED DB: PDB REMARK 900 S-FORMYLGLUTATHIONE HYDROLASE W197I VARIANT INHIBITED WITH PARAOXON REMARK 900 RELATED ID: 4FLM RELATED DB: PDB REMARK 900 S-FORMYLGLUTATHIONE HYDROLASE W197I VARIANT INHIBITED WITH PARAOXON REMARK 900 AND COPPER DBREF 4FOL A 1 299 UNP P40363 SFGH_YEAST 1 299 DBREF 4FOL B 1 299 UNP P40363 SFGH_YEAST 1 299 DBREF 4FOL C 1 299 UNP P40363 SFGH_YEAST 1 299 DBREF 4FOL D 1 299 UNP P40363 SFGH_YEAST 1 299 SEQADV 4FOL ILE A 160 UNP P40363 HIS 160 ENGINEERED MUTATION SEQADV 4FOL ILE B 160 UNP P40363 HIS 160 ENGINEERED MUTATION SEQADV 4FOL ILE C 160 UNP P40363 HIS 160 ENGINEERED MUTATION SEQADV 4FOL ILE D 160 UNP P40363 HIS 160 ENGINEERED MUTATION SEQRES 1 A 299 MET LYS VAL VAL LYS GLU PHE SER VAL CYS GLY GLY ARG SEQRES 2 A 299 LEU ILE LYS LEU SER HIS ASN SER ASN SER THR LYS THR SEQRES 3 A 299 SER MET ASN VAL ASN ILE TYR LEU PRO LYS HIS TYR TYR SEQRES 4 A 299 ALA GLN ASP PHE PRO ARG ASN LYS ARG ILE PRO THR VAL SEQRES 5 A 299 PHE TYR LEU SER GLY LEU THR CYS THR PRO ASP ASN ALA SEQRES 6 A 299 SER GLU LYS ALA PHE TRP GLN PHE GLN ALA ASP LYS TYR SEQRES 7 A 299 GLY PHE ALA ILE VAL PHE PRO ASP THR SER PRO ARG GLY SEQRES 8 A 299 ASP GLU VAL ALA ASN ASP PRO GLU GLY SER TRP ASP PHE SEQRES 9 A 299 GLY GLN GLY ALA GLY PHE TYR LEU ASN ALA THR GLN GLU SEQRES 10 A 299 PRO TYR ALA GLN HIS TYR GLN MET TYR ASP TYR ILE HIS SEQRES 11 A 299 LYS GLU LEU PRO GLN THR LEU ASP SER HIS PHE ASN LYS SEQRES 12 A 299 ASN GLY ASP VAL LYS LEU ASP PHE LEU ASP ASN VAL ALA SEQRES 13 A 299 ILE THR GLY ILE SER MET GLY GLY TYR GLY ALA ILE CYS SEQRES 14 A 299 GLY TYR LEU LYS GLY TYR SER GLY LYS ARG TYR LYS SER SEQRES 15 A 299 CYS SER ALA PHE ALA PRO ILE VAL ASN PRO SER ASN VAL SEQRES 16 A 299 PRO TRP GLY GLN LYS ALA PHE LYS GLY TYR LEU GLY GLU SEQRES 17 A 299 GLU LYS ALA GLN TRP GLU ALA TYR ASP PRO CYS LEU LEU SEQRES 18 A 299 ILE LYS ASN ILE ARG HIS VAL GLY ASP ASP ARG ILE LEU SEQRES 19 A 299 ILE HIS VAL GLY ASP SER ASP PRO PHE LEU GLU GLU HIS SEQRES 20 A 299 LEU LYS PRO GLU LEU LEU LEU GLU ALA VAL LYS ALA THR SEQRES 21 A 299 SER TRP GLN ASP TYR VAL GLU ILE LYS LYS VAL HIS GLY SEQRES 22 A 299 PHE ASP HIS SER TYR TYR PHE VAL SER THR PHE VAL PRO SEQRES 23 A 299 GLU HIS ALA GLU PHE HIS ALA ARG ASN LEU GLY LEU ILE SEQRES 1 B 299 MET LYS VAL VAL LYS GLU PHE SER VAL CYS GLY GLY ARG SEQRES 2 B 299 LEU ILE LYS LEU SER HIS ASN SER ASN SER THR LYS THR SEQRES 3 B 299 SER MET ASN VAL ASN ILE TYR LEU PRO LYS HIS TYR TYR SEQRES 4 B 299 ALA GLN ASP PHE PRO ARG ASN LYS ARG ILE PRO THR VAL SEQRES 5 B 299 PHE TYR LEU SER GLY LEU THR CYS THR PRO ASP ASN ALA SEQRES 6 B 299 SER GLU LYS ALA PHE TRP GLN PHE GLN ALA ASP LYS TYR SEQRES 7 B 299 GLY PHE ALA ILE VAL PHE PRO ASP THR SER PRO ARG GLY SEQRES 8 B 299 ASP GLU VAL ALA ASN ASP PRO GLU GLY SER TRP ASP PHE SEQRES 9 B 299 GLY GLN GLY ALA GLY PHE TYR LEU ASN ALA THR GLN GLU SEQRES 10 B 299 PRO TYR ALA GLN HIS TYR GLN MET TYR ASP TYR ILE HIS SEQRES 11 B 299 LYS GLU LEU PRO GLN THR LEU ASP SER HIS PHE ASN LYS SEQRES 12 B 299 ASN GLY ASP VAL LYS LEU ASP PHE LEU ASP ASN VAL ALA SEQRES 13 B 299 ILE THR GLY ILE SER MET GLY GLY TYR GLY ALA ILE CYS SEQRES 14 B 299 GLY TYR LEU LYS GLY TYR SER GLY LYS ARG TYR LYS SER SEQRES 15 B 299 CYS SER ALA PHE ALA PRO ILE VAL ASN PRO SER ASN VAL SEQRES 16 B 299 PRO TRP GLY GLN LYS ALA PHE LYS GLY TYR LEU GLY GLU SEQRES 17 B 299 GLU LYS ALA GLN TRP GLU ALA TYR ASP PRO CYS LEU LEU SEQRES 18 B 299 ILE LYS ASN ILE ARG HIS VAL GLY ASP ASP ARG ILE LEU SEQRES 19 B 299 ILE HIS VAL GLY ASP SER ASP PRO PHE LEU GLU GLU HIS SEQRES 20 B 299 LEU LYS PRO GLU LEU LEU LEU GLU ALA VAL LYS ALA THR SEQRES 21 B 299 SER TRP GLN ASP TYR VAL GLU ILE LYS LYS VAL HIS GLY SEQRES 22 B 299 PHE ASP HIS SER TYR TYR PHE VAL SER THR PHE VAL PRO SEQRES 23 B 299 GLU HIS ALA GLU PHE HIS ALA ARG ASN LEU GLY LEU ILE SEQRES 1 C 299 MET LYS VAL VAL LYS GLU PHE SER VAL CYS GLY GLY ARG SEQRES 2 C 299 LEU ILE LYS LEU SER HIS ASN SER ASN SER THR LYS THR SEQRES 3 C 299 SER MET ASN VAL ASN ILE TYR LEU PRO LYS HIS TYR TYR SEQRES 4 C 299 ALA GLN ASP PHE PRO ARG ASN LYS ARG ILE PRO THR VAL SEQRES 5 C 299 PHE TYR LEU SER GLY LEU THR CYS THR PRO ASP ASN ALA SEQRES 6 C 299 SER GLU LYS ALA PHE TRP GLN PHE GLN ALA ASP LYS TYR SEQRES 7 C 299 GLY PHE ALA ILE VAL PHE PRO ASP THR SER PRO ARG GLY SEQRES 8 C 299 ASP GLU VAL ALA ASN ASP PRO GLU GLY SER TRP ASP PHE SEQRES 9 C 299 GLY GLN GLY ALA GLY PHE TYR LEU ASN ALA THR GLN GLU SEQRES 10 C 299 PRO TYR ALA GLN HIS TYR GLN MET TYR ASP TYR ILE HIS SEQRES 11 C 299 LYS GLU LEU PRO GLN THR LEU ASP SER HIS PHE ASN LYS SEQRES 12 C 299 ASN GLY ASP VAL LYS LEU ASP PHE LEU ASP ASN VAL ALA SEQRES 13 C 299 ILE THR GLY ILE SER MET GLY GLY TYR GLY ALA ILE CYS SEQRES 14 C 299 GLY TYR LEU LYS GLY TYR SER GLY LYS ARG TYR LYS SER SEQRES 15 C 299 CYS SER ALA PHE ALA PRO ILE VAL ASN PRO SER ASN VAL SEQRES 16 C 299 PRO TRP GLY GLN LYS ALA PHE LYS GLY TYR LEU GLY GLU SEQRES 17 C 299 GLU LYS ALA GLN TRP GLU ALA TYR ASP PRO CYS LEU LEU SEQRES 18 C 299 ILE LYS ASN ILE ARG HIS VAL GLY ASP ASP ARG ILE LEU SEQRES 19 C 299 ILE HIS VAL GLY ASP SER ASP PRO PHE LEU GLU GLU HIS SEQRES 20 C 299 LEU LYS PRO GLU LEU LEU LEU GLU ALA VAL LYS ALA THR SEQRES 21 C 299 SER TRP GLN ASP TYR VAL GLU ILE LYS LYS VAL HIS GLY SEQRES 22 C 299 PHE ASP HIS SER TYR TYR PHE VAL SER THR PHE VAL PRO SEQRES 23 C 299 GLU HIS ALA GLU PHE HIS ALA ARG ASN LEU GLY LEU ILE SEQRES 1 D 299 MET LYS VAL VAL LYS GLU PHE SER VAL CYS GLY GLY ARG SEQRES 2 D 299 LEU ILE LYS LEU SER HIS ASN SER ASN SER THR LYS THR SEQRES 3 D 299 SER MET ASN VAL ASN ILE TYR LEU PRO LYS HIS TYR TYR SEQRES 4 D 299 ALA GLN ASP PHE PRO ARG ASN LYS ARG ILE PRO THR VAL SEQRES 5 D 299 PHE TYR LEU SER GLY LEU THR CYS THR PRO ASP ASN ALA SEQRES 6 D 299 SER GLU LYS ALA PHE TRP GLN PHE GLN ALA ASP LYS TYR SEQRES 7 D 299 GLY PHE ALA ILE VAL PHE PRO ASP THR SER PRO ARG GLY SEQRES 8 D 299 ASP GLU VAL ALA ASN ASP PRO GLU GLY SER TRP ASP PHE SEQRES 9 D 299 GLY GLN GLY ALA GLY PHE TYR LEU ASN ALA THR GLN GLU SEQRES 10 D 299 PRO TYR ALA GLN HIS TYR GLN MET TYR ASP TYR ILE HIS SEQRES 11 D 299 LYS GLU LEU PRO GLN THR LEU ASP SER HIS PHE ASN LYS SEQRES 12 D 299 ASN GLY ASP VAL LYS LEU ASP PHE LEU ASP ASN VAL ALA SEQRES 13 D 299 ILE THR GLY ILE SER MET GLY GLY TYR GLY ALA ILE CYS SEQRES 14 D 299 GLY TYR LEU LYS GLY TYR SER GLY LYS ARG TYR LYS SER SEQRES 15 D 299 CYS SER ALA PHE ALA PRO ILE VAL ASN PRO SER ASN VAL SEQRES 16 D 299 PRO TRP GLY GLN LYS ALA PHE LYS GLY TYR LEU GLY GLU SEQRES 17 D 299 GLU LYS ALA GLN TRP GLU ALA TYR ASP PRO CYS LEU LEU SEQRES 18 D 299 ILE LYS ASN ILE ARG HIS VAL GLY ASP ASP ARG ILE LEU SEQRES 19 D 299 ILE HIS VAL GLY ASP SER ASP PRO PHE LEU GLU GLU HIS SEQRES 20 D 299 LEU LYS PRO GLU LEU LEU LEU GLU ALA VAL LYS ALA THR SEQRES 21 D 299 SER TRP GLN ASP TYR VAL GLU ILE LYS LYS VAL HIS GLY SEQRES 22 D 299 PHE ASP HIS SER TYR TYR PHE VAL SER THR PHE VAL PRO SEQRES 23 D 299 GLU HIS ALA GLU PHE HIS ALA ARG ASN LEU GLY LEU ILE FORMUL 5 HOH *183(H2 O) HELIX 1 1 PRO A 35 ALA A 40 5 6 HELIX 2 2 THR A 61 ALA A 69 1 9 HELIX 3 3 PHE A 70 GLY A 79 1 10 HELIX 4 4 GLN A 116 GLN A 121 1 6 HELIX 5 5 GLN A 124 LYS A 131 1 8 HELIX 6 6 LYS A 131 ASN A 142 1 12 HELIX 7 7 SER A 161 GLY A 174 1 14 HELIX 8 8 TYR A 175 LYS A 178 5 4 HELIX 9 9 ASN A 191 ASN A 194 5 4 HELIX 10 10 VAL A 195 LEU A 206 1 12 HELIX 11 11 TRP A 213 TYR A 216 5 4 HELIX 12 12 ASP A 217 ILE A 222 1 6 HELIX 13 13 LYS A 223 ILE A 225 5 3 HELIX 14 14 PHE A 243 LEU A 248 1 6 HELIX 15 15 PRO A 250 LYS A 258 1 9 HELIX 16 16 SER A 277 LEU A 296 1 20 HELIX 17 17 PRO B 35 ALA B 40 5 6 HELIX 18 18 PRO B 62 ALA B 69 1 8 HELIX 19 19 PHE B 70 GLY B 79 1 10 HELIX 20 20 GLN B 116 GLN B 121 1 6 HELIX 21 21 GLN B 124 LYS B 131 1 8 HELIX 22 22 GLU B 132 ASN B 142 1 11 HELIX 23 23 SER B 161 GLY B 174 1 14 HELIX 24 24 ASN B 191 ASN B 194 5 4 HELIX 25 25 VAL B 195 GLY B 207 1 13 HELIX 26 26 TRP B 213 TYR B 216 5 4 HELIX 27 27 ASP B 217 ILE B 222 1 6 HELIX 28 28 LYS B 223 ILE B 225 5 3 HELIX 29 29 PHE B 243 LEU B 248 1 6 HELIX 30 30 PRO B 250 VAL B 257 1 8 HELIX 31 31 LYS B 258 THR B 260 5 3 HELIX 32 32 SER B 277 LEU B 296 1 20 HELIX 33 33 PRO C 35 ALA C 40 5 6 HELIX 34 34 PRO C 62 ALA C 69 1 8 HELIX 35 35 PHE C 70 GLY C 79 1 10 HELIX 36 36 PRO C 118 HIS C 122 5 5 HELIX 37 37 GLN C 124 LYS C 131 1 8 HELIX 38 38 GLU C 132 ASN C 142 1 11 HELIX 39 39 SER C 161 GLY C 174 1 14 HELIX 40 40 TYR C 175 LYS C 178 5 4 HELIX 41 41 ASN C 191 ASN C 194 5 4 HELIX 42 42 VAL C 195 LEU C 206 1 12 HELIX 43 43 TRP C 213 TYR C 216 5 4 HELIX 44 44 ASP C 217 ILE C 222 1 6 HELIX 45 45 LYS C 223 ILE C 225 5 3 HELIX 46 46 PRO C 250 LYS C 258 1 9 HELIX 47 47 SER C 277 LEU C 296 1 20 HELIX 48 48 PRO D 35 ALA D 40 5 6 HELIX 49 49 PRO D 62 ALA D 69 1 8 HELIX 50 50 PHE D 70 GLY D 79 1 10 HELIX 51 51 GLN D 116 GLN D 121 1 6 HELIX 52 52 GLN D 124 LYS D 131 1 8 HELIX 53 53 LYS D 131 ASN D 142 1 12 HELIX 54 54 SER D 161 GLY D 174 1 14 HELIX 55 55 TYR D 175 LYS D 178 5 4 HELIX 56 56 ASN D 191 ASN D 194 5 4 HELIX 57 57 VAL D 195 LEU D 206 1 12 HELIX 58 58 TRP D 213 TYR D 216 5 4 HELIX 59 59 ASP D 217 ILE D 222 1 6 HELIX 60 60 PRO D 250 VAL D 257 1 8 HELIX 61 61 SER D 277 LEU D 296 1 20 SHEET 1 A 9 LYS A 2 VAL A 9 0 SHEET 2 A 9 GLY A 12 ASN A 20 -1 O LEU A 14 N PHE A 7 SHEET 3 A 9 SER A 27 LEU A 34 -1 O VAL A 30 N LEU A 17 SHEET 4 A 9 ALA A 81 PRO A 85 -1 O PHE A 84 N ASN A 31 SHEET 5 A 9 THR A 51 LEU A 55 1 N TYR A 54 O VAL A 83 SHEET 6 A 9 VAL A 155 GLY A 159 1 O ALA A 156 N THR A 51 SHEET 7 A 9 SER A 182 PHE A 186 1 O PHE A 186 N GLY A 159 SHEET 8 A 9 ILE A 233 GLY A 238 1 O HIS A 236 N ALA A 185 SHEET 9 A 9 VAL A 266 VAL A 271 1 O VAL A 271 N VAL A 237 SHEET 1 B 6 LYS B 2 VAL B 9 0 SHEET 2 B 6 GLY B 12 SER B 21 -1 O LYS B 16 N LYS B 5 SHEET 3 B 6 THR B 26 LEU B 34 -1 O VAL B 30 N LEU B 17 SHEET 4 B 6 ALA B 81 PRO B 85 -1 O PHE B 84 N ASN B 31 SHEET 5 B 6 ILE B 49 LEU B 55 1 N VAL B 52 O VAL B 83 SHEET 6 B 6 LEU B 149 GLY B 159 1 O ASP B 150 N ILE B 49 SHEET 1 C 3 CYS B 183 PHE B 186 0 SHEET 2 C 3 ILE B 233 GLY B 238 1 O HIS B 236 N ALA B 185 SHEET 3 C 3 VAL B 266 VAL B 271 1 O LYS B 269 N ILE B 235 SHEET 1 D 9 LYS C 2 VAL C 9 0 SHEET 2 D 9 GLY C 12 ASN C 20 -1 O LYS C 16 N VAL C 4 SHEET 3 D 9 SER C 27 LEU C 34 -1 O LEU C 34 N ARG C 13 SHEET 4 D 9 ALA C 81 PRO C 85 -1 O PHE C 84 N ASN C 31 SHEET 5 D 9 THR C 51 LEU C 55 1 N VAL C 52 O ALA C 81 SHEET 6 D 9 VAL C 155 GLY C 159 1 O ALA C 156 N PHE C 53 SHEET 7 D 9 SER C 182 PHE C 186 1 O PHE C 186 N GLY C 159 SHEET 8 D 9 ILE C 233 GLY C 238 1 O HIS C 236 N ALA C 185 SHEET 9 D 9 VAL C 266 VAL C 271 1 O LYS C 269 N ILE C 235 SHEET 1 E 9 LYS D 2 VAL D 9 0 SHEET 2 E 9 GLY D 12 ASN D 20 -1 O SER D 18 N LYS D 2 SHEET 3 E 9 SER D 27 LEU D 34 -1 O VAL D 30 N LEU D 17 SHEET 4 E 9 ALA D 81 PHE D 84 -1 O PHE D 84 N ASN D 31 SHEET 5 E 9 PRO D 50 LEU D 55 1 N TYR D 54 O VAL D 83 SHEET 6 E 9 ASP D 150 GLY D 159 1 O ALA D 156 N PHE D 53 SHEET 7 E 9 SER D 182 PHE D 186 1 O SER D 182 N ILE D 157 SHEET 8 E 9 ILE D 233 GLY D 238 1 O LEU D 234 N ALA D 185 SHEET 9 E 9 VAL D 266 VAL D 271 1 O LYS D 269 N ILE D 235 CISPEP 1 GLU C 117 PRO C 118 0 16.76 CISPEP 2 LYS D 173 GLY D 174 0 15.96 CRYST1 66.300 119.740 169.200 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015083 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008351 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005910 0.00000