HEADER TRANSFERASE/TRANSFERASE INHIBITOR 25-JUN-12 4FQS
TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS THYA IN COMPLEX WITH
TITLE 2 UMP AND PEMETREXED
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: THYMIDYLATE SYNTHASE;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: TS, TSASE;
COMPND 5 EC: 2.1.1.45;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;
SOURCE 3 ORGANISM_TAXID: 83332;
SOURCE 4 GENE: MT2834, MTV002.29C, RV2764C, THYA;
SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28
KEYWDS TRANSFERASE, FOLATE BINDING, TRANSFERASE-TRANSFERASE INHIBITOR
KEYWDS 2 COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR M.C.M.REDDY,J.B.BRUNING,W.HARSHBARGER,J.C.SACCHETTINI
REVDAT 3 28-FEB-24 4FQS 1 REMARK
REVDAT 2 15-NOV-17 4FQS 1 REMARK
REVDAT 1 07-AUG-13 4FQS 0
JRNL AUTH M.C.M.REDDY,J.B.BRUNING,W.HARSHBARGER,J.C.SACCHETTINI
JRNL TITL CRYSTAL STRUCTURE OF BINARY AND TERNARY COMPLEXES OF
JRNL TITL 2 THYMIDYLATE SYNTHASE (THYA) FROM MYCOBACTERIUM TUBERCULOSIS:
JRNL TITL 3 INSIGHTS INTO THE SELECTIVITY AND MODE OF INHIBITION
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.80 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.6.4_486
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : MLHL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.88
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0
REMARK 3 NUMBER OF REFLECTIONS : 55636
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.157
REMARK 3 R VALUE (WORKING SET) : 0.155
REMARK 3 FREE R VALUE : 0.199
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990
REMARK 3 FREE R VALUE TEST SET COUNT : 2775
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 21.8801 - 4.8663 0.98 2735 147 0.1718 0.2015
REMARK 3 2 4.8663 - 3.8695 0.99 2712 124 0.1349 0.1549
REMARK 3 3 3.8695 - 3.3824 0.98 2656 139 0.1516 0.1895
REMARK 3 4 3.3824 - 3.0741 0.98 2683 130 0.1495 0.1817
REMARK 3 5 3.0741 - 2.8542 0.99 2641 169 0.1523 0.2073
REMARK 3 6 2.8542 - 2.6863 0.99 2689 148 0.1575 0.2305
REMARK 3 7 2.6863 - 2.5519 0.99 2685 149 0.1541 0.2085
REMARK 3 8 2.5519 - 2.4410 0.99 2627 165 0.1538 0.1730
REMARK 3 9 2.4410 - 2.3471 0.99 2690 134 0.1570 0.2027
REMARK 3 10 2.3471 - 2.2662 0.99 2627 143 0.1534 0.2238
REMARK 3 11 2.2662 - 2.1954 0.98 2613 134 0.1553 0.1928
REMARK 3 12 2.1954 - 2.1327 0.97 2608 138 0.1544 0.2141
REMARK 3 13 2.1327 - 2.0766 0.98 2661 127 0.1565 0.2243
REMARK 3 14 2.0766 - 2.0260 0.98 2617 142 0.1679 0.2220
REMARK 3 15 2.0260 - 1.9800 0.97 2576 135 0.1579 0.2196
REMARK 3 16 1.9800 - 1.9379 0.97 2654 125 0.1548 0.1936
REMARK 3 17 1.9379 - 1.8991 0.98 2633 119 0.1577 0.2006
REMARK 3 18 1.8991 - 1.8633 0.98 2623 140 0.1782 0.2404
REMARK 3 19 1.8633 - 1.8301 0.98 2646 143 0.1849 0.2520
REMARK 3 20 1.8301 - 1.8000 0.94 2485 124 0.1930 0.2378
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : 0.33
REMARK 3 B_SOL : 55.21
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.090
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.42
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.22350
REMARK 3 B22 (A**2) : 4.44470
REMARK 3 B33 (A**2) : -4.22110
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -0.14960
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.007 4513
REMARK 3 ANGLE : 1.168 6181
REMARK 3 CHIRALITY : 0.078 648
REMARK 3 PLANARITY : 0.007 787
REMARK 3 DIHEDRAL : 14.041 1671
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4FQS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUL-12.
REMARK 100 THE DEPOSITION ID IS D_1000073238.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 05-SEP-10
REMARK 200 TEMPERATURE (KELVIN) : 298.0
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL
REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418
REMARK 200 MONOCHROMATOR : MIRRORS
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55678
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 75.0
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 52.39
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS PH 7.0, 200 MM NACL, AND 30%
REMARK 280 POLYETHYLENE GLYCOL 3K, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 298K, PH 7.5
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.04950
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.52250
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.04950
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.52250
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 19920 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 375
REMARK 375 SPECIAL POSITION
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL
REMARK 375 POSITIONS.
REMARK 375
REMARK 375 ATOM RES CSSEQI
REMARK 375 HOH A 419 LIES ON A SPECIAL POSITION.
REMARK 375 HOH B 442 LIES ON A SPECIAL POSITION.
REMARK 375 HOH B 498 LIES ON A SPECIAL POSITION.
REMARK 375 HOH B 535 LIES ON A SPECIAL POSITION.
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 107 CG CD OE1 OE2
REMARK 470 LYS A 249 CD CE NZ
REMARK 470 SER B 105 OG
REMARK 470 GLU B 107 CG CD OE1 OE2
REMARK 470 ASP B 156 CG OD1 OD2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O GLY A 31 NH2 ARG B 35 2.18
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 SER A 100 52.33 -154.98
REMARK 500 SER B 100 52.22 -154.06
REMARK 500 ASP B 122 63.93 -152.08
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP A 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYA A 302
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP B 301
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LYA B 302
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3QJ7 RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF THE MYCOBACTERIUM TUBERCULOSIS THYMIDYLATE
REMARK 900 SYNTHASE (THYA) BOUND TO DUMP
REMARK 900 RELATED ID: 4FOX RELATED DB: PDB
REMARK 900 'CRYSTAL STRUCTURE OF MTB THYA IN COMPLEX WITH UMP AND RALTITREXED'
REMARK 900 RELATED ID: 4FOG RELATED DB: PDB
REMARK 900 'CRYSTAL STRUCTURE OF MTB THYA IN COMPLEX WITH 5-FLUORO-DUMP AND 5-
REMARK 900 METHYLTETRAHYDROFOLIC ACID'
REMARK 900 RELATED ID: 4FOA RELATED DB: PDB
REMARK 900 'CRYSTAL STRUCTURE OF THE MTB THYA IN COMPLEX WITH 5-FLUORO-DUMP'
DBREF 4FQS A 1 263 UNP P67044 TYSY_MYCTU 1 263
DBREF 4FQS B 1 263 UNP P67044 TYSY_MYCTU 1 263
SEQRES 1 A 263 MET THR PRO TYR GLU ASP LEU LEU ARG PHE VAL LEU GLU
SEQRES 2 A 263 THR GLY THR PRO LYS SER ASP ARG THR GLY THR GLY THR
SEQRES 3 A 263 ARG SER LEU PHE GLY GLN GLN MET ARG TYR ASP LEU SER
SEQRES 4 A 263 ALA GLY PHE PRO LEU LEU THR THR LYS LYS VAL HIS PHE
SEQRES 5 A 263 LYS SER VAL ALA TYR GLU LEU LEU TRP PHE LEU ARG GLY
SEQRES 6 A 263 ASP SER ASN ILE GLY TRP LEU HIS GLU HIS GLY VAL THR
SEQRES 7 A 263 ILE TRP ASP GLU TRP ALA SER ASP THR GLY GLU LEU GLY
SEQRES 8 A 263 PRO ILE TYR GLY VAL GLN TRP ARG SER TRP PRO ALA PRO
SEQRES 9 A 263 SER GLY GLU HIS ILE ASP GLN ILE SER ALA ALA LEU ASP
SEQRES 10 A 263 LEU LEU ARG THR ASP PRO ASP SER ARG ARG ILE ILE VAL
SEQRES 11 A 263 SER ALA TRP ASN VAL GLY GLU ILE GLU ARG MET ALA LEU
SEQRES 12 A 263 PRO PRO CYS HIS ALA PHE PHE GLN PHE TYR VAL ALA ASP
SEQRES 13 A 263 GLY ARG LEU SER CYS GLN LEU TYR GLN ARG SER ALA ASP
SEQRES 14 A 263 LEU PHE LEU GLY VAL PRO PHE ASN ILE ALA SER TYR ALA
SEQRES 15 A 263 LEU LEU THR HIS MET MET ALA ALA GLN ALA GLY LEU SER
SEQRES 16 A 263 VAL GLY GLU PHE ILE TRP THR GLY GLY ASP CYS HIS ILE
SEQRES 17 A 263 TYR ASP ASN HIS VAL GLU GLN VAL ARG LEU GLN LEU SER
SEQRES 18 A 263 ARG GLU PRO ARG PRO TYR PRO LYS LEU LEU LEU ALA ASP
SEQRES 19 A 263 ARG ASP SER ILE PHE GLU TYR THR TYR GLU ASP ILE VAL
SEQRES 20 A 263 VAL LYS ASN TYR ASP PRO HIS PRO ALA ILE LYS ALA PRO
SEQRES 21 A 263 VAL ALA VAL
SEQRES 1 B 263 MET THR PRO TYR GLU ASP LEU LEU ARG PHE VAL LEU GLU
SEQRES 2 B 263 THR GLY THR PRO LYS SER ASP ARG THR GLY THR GLY THR
SEQRES 3 B 263 ARG SER LEU PHE GLY GLN GLN MET ARG TYR ASP LEU SER
SEQRES 4 B 263 ALA GLY PHE PRO LEU LEU THR THR LYS LYS VAL HIS PHE
SEQRES 5 B 263 LYS SER VAL ALA TYR GLU LEU LEU TRP PHE LEU ARG GLY
SEQRES 6 B 263 ASP SER ASN ILE GLY TRP LEU HIS GLU HIS GLY VAL THR
SEQRES 7 B 263 ILE TRP ASP GLU TRP ALA SER ASP THR GLY GLU LEU GLY
SEQRES 8 B 263 PRO ILE TYR GLY VAL GLN TRP ARG SER TRP PRO ALA PRO
SEQRES 9 B 263 SER GLY GLU HIS ILE ASP GLN ILE SER ALA ALA LEU ASP
SEQRES 10 B 263 LEU LEU ARG THR ASP PRO ASP SER ARG ARG ILE ILE VAL
SEQRES 11 B 263 SER ALA TRP ASN VAL GLY GLU ILE GLU ARG MET ALA LEU
SEQRES 12 B 263 PRO PRO CYS HIS ALA PHE PHE GLN PHE TYR VAL ALA ASP
SEQRES 13 B 263 GLY ARG LEU SER CYS GLN LEU TYR GLN ARG SER ALA ASP
SEQRES 14 B 263 LEU PHE LEU GLY VAL PRO PHE ASN ILE ALA SER TYR ALA
SEQRES 15 B 263 LEU LEU THR HIS MET MET ALA ALA GLN ALA GLY LEU SER
SEQRES 16 B 263 VAL GLY GLU PHE ILE TRP THR GLY GLY ASP CYS HIS ILE
SEQRES 17 B 263 TYR ASP ASN HIS VAL GLU GLN VAL ARG LEU GLN LEU SER
SEQRES 18 B 263 ARG GLU PRO ARG PRO TYR PRO LYS LEU LEU LEU ALA ASP
SEQRES 19 B 263 ARG ASP SER ILE PHE GLU TYR THR TYR GLU ASP ILE VAL
SEQRES 20 B 263 VAL LYS ASN TYR ASP PRO HIS PRO ALA ILE LYS ALA PRO
SEQRES 21 B 263 VAL ALA VAL
HET UMP A 301 20
HET LYA A 302 31
HET UMP B 301 20
HET LYA B 302 31
HETNAM UMP 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
HETNAM LYA 2-{4-[2-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-
HETNAM 2 LYA D]PYRIMIDIN-5-YL)-ETHYL]-BENZOYLAMINO}-PENTANEDIOIC
HETNAM 3 LYA ACID
HETSYN UMP DUMP
HETSYN LYA LY231514
FORMUL 3 UMP 2(C9 H13 N2 O8 P)
FORMUL 4 LYA 2(C20 H21 N5 O6)
FORMUL 7 HOH *1032(H2 O)
HELIX 1 1 THR A 2 GLY A 15 1 14
HELIX 2 2 SER A 39 GLY A 41 5 3
HELIX 3 3 HIS A 51 GLY A 65 1 15
HELIX 4 4 ILE A 69 HIS A 75 1 7
HELIX 5 5 TRP A 80 ALA A 84 5 5
HELIX 6 6 ILE A 93 SER A 100 1 8
HELIX 7 7 ASP A 110 ASP A 122 1 13
HELIX 8 8 GLU A 137 MET A 141 5 5
HELIX 9 9 LEU A 172 GLY A 193 1 22
HELIX 10 10 HIS A 212 SER A 221 1 10
HELIX 11 11 SER A 237 TYR A 241 5 5
HELIX 12 12 THR A 242 GLU A 244 5 3
HELIX 13 13 THR B 2 GLY B 15 1 14
HELIX 14 14 SER B 39 GLY B 41 5 3
HELIX 15 15 HIS B 51 ARG B 64 1 14
HELIX 16 16 ILE B 69 HIS B 75 1 7
HELIX 17 17 TRP B 80 ALA B 84 5 5
HELIX 18 18 ILE B 93 SER B 100 1 8
HELIX 19 19 ASP B 110 ASP B 122 1 13
HELIX 20 20 ASN B 134 MET B 141 5 8
HELIX 21 21 LEU B 172 GLY B 193 1 22
HELIX 22 22 HIS B 212 SER B 221 1 10
HELIX 23 23 SER B 237 TYR B 241 5 5
HELIX 24 24 THR B 242 GLU B 244 5 3
SHEET 1 A 6 THR A 16 LYS A 18 0
SHEET 2 A 6 THR A 26 ASP A 37 -1 O THR A 26 N LYS A 18
SHEET 3 A 6 SER A 195 TYR A 209 -1 O GLY A 203 N GLN A 32
SHEET 4 A 6 ARG A 158 ASP A 169 1 N LEU A 159 O SER A 195
SHEET 5 A 6 HIS A 147 ALA A 155 -1 N PHE A 149 O TYR A 164
SHEET 6 A 6 ILE A 129 SER A 131 -1 N VAL A 130 O PHE A 150
SHEET 1 B 2 TRP A 101 PRO A 102 0
SHEET 2 B 2 HIS A 108 ILE A 109 -1 O ILE A 109 N TRP A 101
SHEET 1 C 2 LYS A 229 LEU A 232 0
SHEET 2 C 2 ILE A 246 LYS A 249 -1 O LYS A 249 N LYS A 229
SHEET 1 D 6 THR B 16 LYS B 18 0
SHEET 2 D 6 THR B 26 ASP B 37 -1 O THR B 26 N LYS B 18
SHEET 3 D 6 SER B 195 TYR B 209 -1 O CYS B 206 N LEU B 29
SHEET 4 D 6 ARG B 158 ASP B 169 1 N LEU B 159 O SER B 195
SHEET 5 D 6 HIS B 147 ALA B 155 -1 N PHE B 149 O TYR B 164
SHEET 6 D 6 ILE B 129 SER B 131 -1 N VAL B 130 O PHE B 150
SHEET 1 E 2 TRP B 101 PRO B 102 0
SHEET 2 E 2 HIS B 108 ILE B 109 -1 O ILE B 109 N TRP B 101
SHEET 1 F 2 LYS B 229 LEU B 232 0
SHEET 2 F 2 ILE B 246 LYS B 249 -1 O LYS B 249 N LYS B 229
SITE 1 AC1 17 ARG A 21 TYR A 94 CYS A 146 HIS A 147
SITE 2 AC1 17 GLN A 165 ARG A 166 SER A 167 ALA A 168
SITE 3 AC1 17 ASP A 169 ASN A 177 HIS A 207 TYR A 209
SITE 4 AC1 17 LYA A 302 HOH A 405 HOH A 407 ARG B 126
SITE 5 AC1 17 ARG B 127
SITE 1 AC2 24 GLU A 58 ILE A 79 TRP A 80 TRP A 83
SITE 2 AC2 24 LEU A 143 ASP A 169 LEU A 172 GLY A 173
SITE 3 AC2 24 PHE A 176 VAL A 261 ALA A 262 UMP A 301
SITE 4 AC2 24 HOH A 404 HOH A 413 HOH A 426 HOH A 429
SITE 5 AC2 24 HOH A 433 HOH A 436 HOH A 443 HOH A 469
SITE 6 AC2 24 HOH A 541 HOH A 805 HOH A 867 HOH A 880
SITE 1 AC3 17 ARG A 126 ARG A 127 ARG B 21 TYR B 94
SITE 2 AC3 17 CYS B 146 HIS B 147 GLN B 165 ARG B 166
SITE 3 AC3 17 SER B 167 ALA B 168 ASP B 169 ASN B 177
SITE 4 AC3 17 HIS B 207 TYR B 209 LYA B 302 HOH B 411
SITE 5 AC3 17 HOH B 430
SITE 1 AC4 25 GLU B 58 ILE B 79 TRP B 80 TRP B 83
SITE 2 AC4 25 LEU B 143 ASP B 169 LEU B 172 GLY B 173
SITE 3 AC4 25 PHE B 176 TYR B 209 VAL B 261 ALA B 262
SITE 4 AC4 25 UMP B 301 HOH B 416 HOH B 420 HOH B 424
SITE 5 AC4 25 HOH B 426 HOH B 428 HOH B 433 HOH B 454
SITE 6 AC4 25 HOH B 455 HOH B 468 HOH B 540 HOH B 636
SITE 7 AC4 25 HOH B 842
CRYST1 100.099 57.045 113.694 90.00 107.95 90.00 C 1 2 1 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.009990 0.000000 0.003236 0.00000
SCALE2 0.000000 0.017530 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009245 0.00000