HEADER TOXIN 03-JUL-12 4FXH TITLE CRYSTAL STRUCTURE OF THE ISOLATED E. COLI RELE TOXIN, P212121 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: MRNA INTERFERASE RELE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RELE; COMPND 5 SYNONYM: ENDORIBONUCLEASE RELE, TOXIN RELE; COMPND 6 EC: 3.1.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B1563, JW1555, RELE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSC2524HE KEYWDS TOXIN/ANTITOXIN SYSTEM, TOXIN, NUCLEASE, TRANSLATIONAL CONTROL, KEYWDS 2 STRESS RESPONSE, RELB, RIBOSOME, B-ME ON CYS50 EXPDTA X-RAY DIFFRACTION AUTHOR D.E.BRODERSEN,A.BOGGILD,N.SOFOS REVDAT 3 13-SEP-23 4FXH 1 REMARK SEQADV LINK REVDAT 2 26-DEC-12 4FXH 1 JRNL REVDAT 1 29-AUG-12 4FXH 0 JRNL AUTH A.BOGGILD,N.SOFOS,K.R.ANDERSEN,A.FEDDERSEN,A.D.EASTER, JRNL AUTH 2 L.A.PASSMORE,D.E.BRODERSEN JRNL TITL THE CRYSTAL STRUCTURE OF THE INTACT E. COLI RELBE JRNL TITL 2 TOXIN-ANTITOXIN COMPLEX PROVIDES THE STRUCTURAL BASIS FOR JRNL TITL 3 CONDITIONAL COOPERATIVITY. JRNL REF STRUCTURE V. 20 1641 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22981948 JRNL DOI 10.1016/J.STR.2012.08.017 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 7220 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6733 - 3.4608 0.93 2321 110 0.2159 0.2366 REMARK 3 2 3.4608 - 2.7472 0.96 2288 121 0.2439 0.3394 REMARK 3 3 2.7472 - 2.4000 0.97 2261 119 0.2864 0.3340 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 50.36 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.58810 REMARK 3 B22 (A**2) : 0.67510 REMARK 3 B33 (A**2) : -2.26320 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1551 REMARK 3 ANGLE : 0.827 2077 REMARK 3 CHIRALITY : 0.057 232 REMARK 3 PLANARITY : 0.004 257 REMARK 3 DIHEDRAL : 20.435 629 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 2:15) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2722 -15.2763 -15.8531 REMARK 3 T TENSOR REMARK 3 T11: 0.4051 T22: 0.1905 REMARK 3 T33: 0.2756 T12: 0.0643 REMARK 3 T13: -0.1591 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 6.1785 L22: 4.7509 REMARK 3 L33: 2.0919 L12: -0.1694 REMARK 3 L13: -1.0164 L23: -1.1970 REMARK 3 S TENSOR REMARK 3 S11: -0.1763 S12: 0.6469 S13: 0.0696 REMARK 3 S21: -0.4352 S22: 0.1090 S23: 0.2948 REMARK 3 S31: -0.0759 S32: -0.1688 S33: 0.0049 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 16:33) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1100 -24.8727 -10.5237 REMARK 3 T TENSOR REMARK 3 T11: 0.5613 T22: 0.6286 REMARK 3 T33: 0.8647 T12: -0.1358 REMARK 3 T13: 0.0916 T23: 0.1627 REMARK 3 L TENSOR REMARK 3 L11: 4.9195 L22: 3.7407 REMARK 3 L33: 7.8105 L12: -2.8466 REMARK 3 L13: 3.8073 L23: -2.4898 REMARK 3 S TENSOR REMARK 3 S11: 0.2948 S12: -0.0030 S13: -1.2397 REMARK 3 S21: -0.2041 S22: 1.1768 S23: 1.3919 REMARK 3 S31: 1.4535 S32: -0.7995 S33: -1.2848 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 34:78) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5281 -14.1397 -7.1067 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.3132 REMARK 3 T33: 0.2146 T12: 0.0857 REMARK 3 T13: 0.0187 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 6.4759 L22: 6.3500 REMARK 3 L33: 6.2504 L12: -0.2729 REMARK 3 L13: 0.8952 L23: 0.8215 REMARK 3 S TENSOR REMARK 3 S11: -0.2854 S12: -0.5454 S13: 0.1894 REMARK 3 S21: 0.5143 S22: 0.3856 S23: -0.6009 REMARK 3 S31: 0.0093 S32: 0.2390 S33: -0.0905 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 79:83) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9152 -31.6435 -16.5502 REMARK 3 T TENSOR REMARK 3 T11: 0.3807 T22: 1.0525 REMARK 3 T33: 0.9571 T12: 0.3438 REMARK 3 T13: 0.2127 T23: -0.4332 REMARK 3 L TENSOR REMARK 3 L11: 4.2331 L22: 7.1769 REMARK 3 L33: 4.5958 L12: -1.3541 REMARK 3 L13: 1.1505 L23: -0.1026 REMARK 3 S TENSOR REMARK 3 S11: 0.9836 S12: 0.2072 S13: -0.5695 REMARK 3 S21: -0.0171 S22: -0.0026 S23: -0.8687 REMARK 3 S31: 0.5029 S32: 0.0989 S33: -0.7463 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 84:95) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5401 -43.1749 -18.7901 REMARK 3 T TENSOR REMARK 3 T11: 0.2794 T22: 0.3108 REMARK 3 T33: 0.4301 T12: -0.0274 REMARK 3 T13: -0.0277 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 2.2074 L22: 4.8489 REMARK 3 L33: 2.1137 L12: -1.2038 REMARK 3 L13: 1.1900 L23: 0.2802 REMARK 3 S TENSOR REMARK 3 S11: -0.2008 S12: 0.2966 S13: 0.2268 REMARK 3 S21: -0.2768 S22: 0.3824 S23: 0.1547 REMARK 3 S31: -0.1044 S32: 0.6195 S33: 0.0284 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 2:8) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5555 -47.7149 -13.1021 REMARK 3 T TENSOR REMARK 3 T11: -0.8467 T22: 0.6087 REMARK 3 T33: 1.7545 T12: 0.7370 REMARK 3 T13: -0.1388 T23: -0.7770 REMARK 3 L TENSOR REMARK 3 L11: 3.7981 L22: 1.9865 REMARK 3 L33: 4.5793 L12: -1.0030 REMARK 3 L13: -1.7698 L23: -2.0802 REMARK 3 S TENSOR REMARK 3 S11: 0.8277 S12: 1.0512 S13: -0.8271 REMARK 3 S21: -0.2441 S22: 0.7939 S23: -0.4677 REMARK 3 S31: 0.3744 S32: 0.3353 S33: -0.6883 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 9:15) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7341 -35.4530 -18.1848 REMARK 3 T TENSOR REMARK 3 T11: 0.7389 T22: 0.4589 REMARK 3 T33: 0.3916 T12: -0.0634 REMARK 3 T13: 0.1263 T23: -0.0577 REMARK 3 L TENSOR REMARK 3 L11: 2.0331 L22: 8.7381 REMARK 3 L33: 2.0281 L12: 6.4303 REMARK 3 L13: 5.3299 L23: 7.6086 REMARK 3 S TENSOR REMARK 3 S11: -0.8199 S12: 0.8979 S13: 0.7391 REMARK 3 S21: -1.5582 S22: 0.3509 S23: 0.5066 REMARK 3 S31: -0.8275 S32: 1.8696 S33: 0.4048 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 16:21) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4571 -30.5592 -10.9531 REMARK 3 T TENSOR REMARK 3 T11: 1.0038 T22: 1.1928 REMARK 3 T33: 0.6983 T12: 0.3923 REMARK 3 T13: 0.1699 T23: -0.2566 REMARK 3 L TENSOR REMARK 3 L11: 5.5247 L22: 2.7422 REMARK 3 L33: 2.4442 L12: 2.3538 REMARK 3 L13: 2.8594 L23: -0.0880 REMARK 3 S TENSOR REMARK 3 S11: -0.7277 S12: 0.6778 S13: 0.1041 REMARK 3 S21: -0.8619 S22: 0.4300 S23: -0.7898 REMARK 3 S31: 0.0421 S32: 0.7380 S33: -0.0537 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 22:33) REMARK 3 ORIGIN FOR THE GROUP (A): 28.8831 -39.0321 -4.3470 REMARK 3 T TENSOR REMARK 3 T11: 0.7023 T22: 0.5499 REMARK 3 T33: 0.4924 T12: -0.0577 REMARK 3 T13: -0.3375 T23: -0.0797 REMARK 3 L TENSOR REMARK 3 L11: 7.4645 L22: 7.6882 REMARK 3 L33: 3.7355 L12: 1.1032 REMARK 3 L13: -0.5466 L23: 2.2443 REMARK 3 S TENSOR REMARK 3 S11: 0.4118 S12: -0.1224 S13: -1.0898 REMARK 3 S21: 1.3820 S22: 0.7203 S23: -1.9784 REMARK 3 S31: -0.2746 S32: 1.4865 S33: -0.9640 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 34:42) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6732 -46.8890 -1.1686 REMARK 3 T TENSOR REMARK 3 T11: 0.8960 T22: 0.6274 REMARK 3 T33: 0.6290 T12: -0.0522 REMARK 3 T13: -0.2180 T23: 0.1013 REMARK 3 L TENSOR REMARK 3 L11: 6.3248 L22: 2.0460 REMARK 3 L33: 0.8782 L12: 0.7189 REMARK 3 L13: -0.8459 L23: -1.0376 REMARK 3 S TENSOR REMARK 3 S11: 1.3321 S12: -1.7769 S13: -1.4734 REMARK 3 S21: 0.9570 S22: -0.0302 S23: 0.0287 REMARK 3 S31: 0.2678 S32: -0.5525 S33: -0.9039 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 43:51) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5187 -41.2763 -7.2572 REMARK 3 T TENSOR REMARK 3 T11: 0.7086 T22: 0.7084 REMARK 3 T33: 0.4626 T12: 0.1019 REMARK 3 T13: 0.0324 T23: -0.1888 REMARK 3 L TENSOR REMARK 3 L11: 9.6822 L22: 2.1573 REMARK 3 L33: 5.8808 L12: 1.7392 REMARK 3 L13: -3.8859 L23: 0.1792 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: -1.3578 S13: 0.2364 REMARK 3 S21: 0.3915 S22: -0.8171 S23: 1.4313 REMARK 3 S31: -0.7841 S32: -2.9663 S33: 1.2313 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 52:59) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5072 -31.8588 -1.7482 REMARK 3 T TENSOR REMARK 3 T11: 0.4738 T22: 0.5726 REMARK 3 T33: 0.3092 T12: -0.1249 REMARK 3 T13: 0.0934 T23: -0.1645 REMARK 3 L TENSOR REMARK 3 L11: 7.4315 L22: 2.0139 REMARK 3 L33: 3.4841 L12: 7.0699 REMARK 3 L13: 0.3706 L23: -2.9826 REMARK 3 S TENSOR REMARK 3 S11: 1.3328 S12: -0.8984 S13: 0.7813 REMARK 3 S21: 1.9615 S22: -0.2289 S23: 1.2666 REMARK 3 S31: -0.1608 S32: -0.4498 S33: -0.7331 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 60:70) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3374 -43.7751 -10.1267 REMARK 3 T TENSOR REMARK 3 T11: 0.3842 T22: 0.4173 REMARK 3 T33: 0.3467 T12: 0.0455 REMARK 3 T13: -0.1018 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 2.4680 L22: 8.8456 REMARK 3 L33: 5.7393 L12: 6.0852 REMARK 3 L13: 0.5275 L23: -0.7750 REMARK 3 S TENSOR REMARK 3 S11: 0.3721 S12: -0.0924 S13: -0.7712 REMARK 3 S21: -0.4614 S22: -0.3975 S23: -0.5534 REMARK 3 S31: 0.6811 S32: -0.6187 S33: 0.0626 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 71:84) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5365 -35.5908 -12.1892 REMARK 3 T TENSOR REMARK 3 T11: 0.2583 T22: 0.3083 REMARK 3 T33: 0.1943 T12: 0.0803 REMARK 3 T13: -0.0235 T23: -0.0730 REMARK 3 L TENSOR REMARK 3 L11: 4.9630 L22: 7.9377 REMARK 3 L33: 4.8832 L12: -1.1264 REMARK 3 L13: 0.4625 L23: 2.6036 REMARK 3 S TENSOR REMARK 3 S11: 0.0313 S12: 0.0467 S13: 0.3292 REMARK 3 S21: -0.6932 S22: 0.1842 S23: -0.7660 REMARK 3 S31: -0.1572 S32: -0.3936 S33: -0.0545 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 85:95) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7825 -17.6509 -18.1793 REMARK 3 T TENSOR REMARK 3 T11: 0.3674 T22: 0.6511 REMARK 3 T33: 0.2503 T12: 0.1711 REMARK 3 T13: 0.0029 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 6.6561 L22: 2.0360 REMARK 3 L33: 6.9735 L12: 5.6108 REMARK 3 L13: -0.3603 L23: -6.2845 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: 0.7685 S13: -0.4186 REMARK 3 S21: -0.1454 S22: -0.6416 S23: -1.1925 REMARK 3 S31: 0.1578 S32: 0.3001 S33: 0.5034 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FXH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91838 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8223 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 44.291 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : 18.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.15100 REMARK 200 R SYM FOR SHELL (I) : 0.15100 REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3KHA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES, 0.2 M AMMONIUM SULPHATE, REMARK 280 30% PEG 5000 MME, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.31550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.95200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.72150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 31.95200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.31550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.72150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 55 REMARK 465 ARG A 56 REMARK 465 SER A 57 REMARK 465 SER A 58 REMARK 465 GLY A 59 REMARK 465 TYR A 60 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP B 8 O HOH B 235 2.16 REMARK 500 OH TYR B 3 OD1 ASP B 68 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 23 8.30 -61.26 REMARK 500 SER A 36 87.76 -151.55 REMARK 500 LYS B 17 -156.29 -107.61 REMARK 500 LEU B 18 86.45 -69.12 REMARK 500 SER B 20 -71.64 -40.77 REMARK 500 LYS B 70 3.30 -157.18 REMARK 500 VAL B 71 45.99 38.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3KHA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RELE REMARK 900 RELATED ID: 2KC8 RELATED DB: PDB REMARK 900 NMR STRUCTURE OF RELE MONOMER REMARK 900 RELATED ID: 2KC9 RELATED DB: PDB REMARK 900 NMR STRUCTURE OF RELE BOUND TO A FRAGMENT OF RELB DBREF 4FXH A 1 95 UNP P0C077 RELE_ECOLI 1 95 DBREF 4FXH B 1 95 UNP P0C077 RELE_ECOLI 1 95 SEQADV 4FXH ALA A 81 UNP P0C077 ARG 81 ENGINEERED MUTATION SEQADV 4FXH ALA B 81 UNP P0C077 ARG 81 ENGINEERED MUTATION SEQRES 1 A 95 MET ALA TYR PHE LEU ASP PHE ASP GLU ARG ALA LEU LYS SEQRES 2 A 95 GLU TRP ARG LYS LEU GLY SER THR VAL ARG GLU GLN LEU SEQRES 3 A 95 LYS LYS LYS LEU VAL GLU VAL LEU GLU SER PRO ARG ILE SEQRES 4 A 95 GLU ALA ASN LYS LEU ARG GLY MET PRO ASP CME TYR LYS SEQRES 5 A 95 ILE LYS LEU ARG SER SER GLY TYR ARG LEU VAL TYR GLN SEQRES 6 A 95 VAL ILE ASP GLU LYS VAL VAL VAL PHE VAL ILE SER VAL SEQRES 7 A 95 GLY LYS ALA GLU ARG SER GLU VAL TYR SER GLU ALA VAL SEQRES 8 A 95 LYS ARG ILE LEU SEQRES 1 B 95 MET ALA TYR PHE LEU ASP PHE ASP GLU ARG ALA LEU LYS SEQRES 2 B 95 GLU TRP ARG LYS LEU GLY SER THR VAL ARG GLU GLN LEU SEQRES 3 B 95 LYS LYS LYS LEU VAL GLU VAL LEU GLU SER PRO ARG ILE SEQRES 4 B 95 GLU ALA ASN LYS LEU ARG GLY MET PRO ASP CME TYR LYS SEQRES 5 B 95 ILE LYS LEU ARG SER SER GLY TYR ARG LEU VAL TYR GLN SEQRES 6 B 95 VAL ILE ASP GLU LYS VAL VAL VAL PHE VAL ILE SER VAL SEQRES 7 B 95 GLY LYS ALA GLU ARG SER GLU VAL TYR SER GLU ALA VAL SEQRES 8 B 95 LYS ARG ILE LEU MODRES 4FXH CME A 50 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE MODRES 4FXH CME B 50 CYS S,S-(2-HYDROXYETHYL)THIOCYSTEINE HET CME A 50 10 HET CME B 50 10 HET SO4 B 101 5 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM SO4 SULFATE ION FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *194(H2 O) HELIX 1 1 ASP A 8 ARG A 16 1 9 HELIX 2 2 THR A 21 LEU A 34 1 14 HELIX 3 3 ILE A 39 LYS A 43 5 5 HELIX 4 4 ARG A 83 ILE A 94 1 12 HELIX 5 5 ASP B 8 ARG B 16 1 9 HELIX 6 6 THR B 21 LEU B 34 1 14 HELIX 7 7 ILE B 39 LYS B 43 5 5 HELIX 8 8 SER B 84 LEU B 95 1 12 SHEET 1 A 4 PHE A 4 PHE A 7 0 SHEET 2 A 4 VAL A 72 VAL A 78 1 O VAL A 73 N PHE A 4 SHEET 3 A 4 LEU A 62 ILE A 67 -1 N VAL A 63 O SER A 77 SHEET 4 A 4 CME A 50 ILE A 53 -1 N ILE A 53 O LEU A 62 SHEET 1 B 4 PHE B 4 PHE B 7 0 SHEET 2 B 4 VAL B 72 LYS B 80 1 O VAL B 73 N PHE B 4 SHEET 3 B 4 TYR B 60 ILE B 67 -1 N ARG B 61 O GLY B 79 SHEET 4 B 4 CME B 50 LEU B 55 -1 N ILE B 53 O LEU B 62 LINK C ASP A 49 N CME A 50 1555 1555 1.33 LINK C CME A 50 N TYR A 51 1555 1555 1.33 LINK C ASP B 49 N CME B 50 1555 1555 1.32 LINK C CME B 50 N TYR B 51 1555 1555 1.32 SITE 1 AC1 6 LYS A 17 LYS B 29 LYS B 54 LEU B 55 SITE 2 AC1 6 ARG B 56 HOH B 222 CRYST1 46.631 61.443 63.904 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021445 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016275 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015649 0.00000