HEADER TRANSFERASE 03-JUL-12 4FXP TITLE CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM TITLE 2 ARABIDOPSIS THALIANA IN COMPLEX WITH SULFATE AND APS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 77-276; COMPND 5 SYNONYM: ATP ADENOSINE-5'-PHOSPHOSULFATE 3'-PHOSPHOTRANSFERASE, COMPND 6 ADENOSINE-5'-PHOSPHOSULFATE KINASE, APS KINASE; COMPND 7 EC: 2.7.1.25; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS,THALE-CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AKN1, AT2G14750, F26C24.11, T6B13.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMANN FOLD, NUCLEOTIDE KINASE, CHLOROPLAST, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.E.RAVILIOUS,J.M.JEZ REVDAT 3 09-OCT-24 4FXP 1 REMARK REVDAT 2 09-JAN-13 4FXP 1 JRNL REVDAT 1 25-JUL-12 4FXP 0 JRNL AUTH G.E.RAVILIOUS,J.M.JEZ JRNL TITL NUCLEOTIDE BINDING SITE COMMUNICATION IN ARABIDOPSIS JRNL TITL 2 THALIANA ADENOSINE 5'-PHOSPHOSULFATE KINASE. JRNL REF J.BIOL.CHEM. V. 287 30385 2012 JRNL REFN ISSN 0021-9258 JRNL PMID 22810229 JRNL DOI 10.1074/JBC.M112.387001 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.6.2_432) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 52723 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2675 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8619 - 4.2067 0.93 4801 276 0.1602 0.1667 REMARK 3 2 4.2067 - 3.3399 0.99 5064 276 0.1493 0.1681 REMARK 3 3 3.3399 - 2.9180 1.00 5037 294 0.1720 0.1993 REMARK 3 4 2.9180 - 2.6513 1.00 5058 279 0.1824 0.2186 REMARK 3 5 2.6513 - 2.4614 1.00 5022 279 0.1807 0.2067 REMARK 3 6 2.4614 - 2.3163 1.00 5061 263 0.1735 0.2172 REMARK 3 7 2.3163 - 2.2003 1.00 5084 260 0.1663 0.1973 REMARK 3 8 2.2003 - 2.1045 1.00 5032 232 0.1607 0.1896 REMARK 3 9 2.1045 - 2.0235 1.00 5055 251 0.1692 0.2062 REMARK 3 10 2.0235 - 1.9537 0.96 4834 265 0.1942 0.2477 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.37 REMARK 3 B_SOL : 45.78 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12210 REMARK 3 B22 (A**2) : 15.77050 REMARK 3 B33 (A**2) : -15.64840 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.55300 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4849 REMARK 3 ANGLE : 0.990 6595 REMARK 3 CHIRALITY : 0.061 723 REMARK 3 PLANARITY : 0.004 862 REMARK 3 DIHEDRAL : 16.776 1929 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -5.2951 0.7867 12.9676 REMARK 3 T TENSOR REMARK 3 T11: 0.1920 T22: 0.2221 REMARK 3 T33: 0.2146 T12: -0.0283 REMARK 3 T13: -0.0243 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.5414 L22: 0.7999 REMARK 3 L33: 1.7234 L12: 0.1599 REMARK 3 L13: -0.3996 L23: 0.2780 REMARK 3 S TENSOR REMARK 3 S11: -0.0024 S12: -0.0486 S13: 0.0029 REMARK 3 S21: 0.1065 S22: -0.0456 S23: -0.0142 REMARK 3 S31: 0.1891 S32: -0.0248 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 11.9433 24.1270 35.4650 REMARK 3 T TENSOR REMARK 3 T11: 0.3012 T22: 0.1941 REMARK 3 T33: 0.2407 T12: -0.1274 REMARK 3 T13: 0.0174 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.8605 L22: 0.5676 REMARK 3 L33: 1.5029 L12: 0.2797 REMARK 3 L13: 0.0351 L23: 0.2508 REMARK 3 S TENSOR REMARK 3 S11: -0.0813 S12: 0.0662 S13: -0.0990 REMARK 3 S21: -0.0947 S22: 0.1359 S23: -0.0428 REMARK 3 S31: -0.2960 S32: 0.2112 S33: -0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): 2.7919 23.0199 61.1345 REMARK 3 T TENSOR REMARK 3 T11: 0.2708 T22: 0.3143 REMARK 3 T33: 0.2595 T12: -0.0912 REMARK 3 T13: -0.0010 T23: -0.0229 REMARK 3 L TENSOR REMARK 3 L11: 1.0664 L22: 0.6745 REMARK 3 L33: 1.3926 L12: 0.0484 REMARK 3 L13: -0.5821 L23: 0.0382 REMARK 3 S TENSOR REMARK 3 S11: 0.1167 S12: -0.3556 S13: 0.0146 REMARK 3 S21: 0.1148 S22: -0.0825 S23: -0.0081 REMARK 3 S31: -0.2112 S32: 0.2410 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4FXP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073482. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SAGITTAL FOCUSING SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52723 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 33.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 200 MM MAGNESIUM REMARK 280 CHLORIDE, 15 % PEG 2000, PH 7.25, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.47400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.17400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.47400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 46.17400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 77 REMARK 465 SER A 78 REMARK 465 THR A 79 REMARK 465 ASN A 80 REMARK 465 ILE A 81 REMARK 465 LYS A 82 REMARK 465 TRP A 83 REMARK 465 HIS A 84 REMARK 465 ASN C 77 REMARK 465 SER C 78 REMARK 465 THR C 79 REMARK 465 ASN C 80 REMARK 465 ILE C 81 REMARK 465 LYS C 82 REMARK 465 TRP C 83 REMARK 465 HIS C 84 REMARK 465 GLU C 85 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 78 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY C 253 N THR C 255 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 532 O HOH B 532 2556 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 149 -162.49 -100.03 REMARK 500 ASP A 216 69.62 24.30 REMARK 500 ILE A 235 -66.60 -100.21 REMARK 500 ASN A 244 60.50 -152.66 REMARK 500 SER B 149 -148.21 -99.12 REMARK 500 ASN B 244 55.33 -152.25 REMARK 500 ASN B 244 55.23 -152.25 REMARK 500 SER C 149 -153.69 -107.85 REMARK 500 ASN C 244 72.46 -155.07 REMARK 500 GLU C 252 142.21 179.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADX A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADX B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADX C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3UIE RELATED DB: PDB DBREF 4FXP A 77 276 UNP Q43295 KAP1_ARATH 77 276 DBREF 4FXP B 77 276 UNP Q43295 KAP1_ARATH 77 276 DBREF 4FXP C 77 276 UNP Q43295 KAP1_ARATH 77 276 SEQRES 1 A 200 ASN SER THR ASN ILE LYS TRP HIS GLU CYS SER VAL GLU SEQRES 2 A 200 LYS VAL ASP ARG GLN ARG LEU LEU ASP GLN LYS GLY CYS SEQRES 3 A 200 VAL ILE TRP VAL THR GLY LEU SER GLY SER GLY LYS SER SEQRES 4 A 200 THR LEU ALA CYS ALA LEU ASN GLN MET LEU TYR GLN LYS SEQRES 5 A 200 GLY LYS LEU CYS TYR ILE LEU ASP GLY ASP ASN VAL ARG SEQRES 6 A 200 HIS GLY LEU ASN ARG ASP LEU SER PHE LYS ALA GLU ASP SEQRES 7 A 200 ARG ALA GLU ASN ILE ARG ARG VAL GLY GLU VAL ALA LYS SEQRES 8 A 200 LEU PHE ALA ASP ALA GLY ILE ILE CYS ILE ALA SER LEU SEQRES 9 A 200 ILE SER PRO TYR ARG THR ASP ARG ASP ALA CYS ARG SER SEQRES 10 A 200 LEU LEU PRO GLU GLY ASP PHE VAL GLU VAL PHE MET ASP SEQRES 11 A 200 VAL PRO LEU SER VAL CYS GLU ALA ARG ASP PRO LYS GLY SEQRES 12 A 200 LEU TYR LYS LEU ALA ARG ALA GLY LYS ILE LYS GLY PHE SEQRES 13 A 200 THR GLY ILE ASP ASP PRO TYR GLU PRO PRO LEU ASN CYS SEQRES 14 A 200 GLU ILE SER LEU GLY ARG GLU GLY GLY THR SER PRO ILE SEQRES 15 A 200 GLU MET ALA GLU LYS VAL VAL GLY TYR LEU ASP ASN LYS SEQRES 16 A 200 GLY TYR LEU GLN ALA SEQRES 1 B 200 ASN SER THR ASN ILE LYS TRP HIS GLU CYS SER VAL GLU SEQRES 2 B 200 LYS VAL ASP ARG GLN ARG LEU LEU ASP GLN LYS GLY CYS SEQRES 3 B 200 VAL ILE TRP VAL THR GLY LEU SER GLY SER GLY LYS SER SEQRES 4 B 200 THR LEU ALA CYS ALA LEU ASN GLN MET LEU TYR GLN LYS SEQRES 5 B 200 GLY LYS LEU CYS TYR ILE LEU ASP GLY ASP ASN VAL ARG SEQRES 6 B 200 HIS GLY LEU ASN ARG ASP LEU SER PHE LYS ALA GLU ASP SEQRES 7 B 200 ARG ALA GLU ASN ILE ARG ARG VAL GLY GLU VAL ALA LYS SEQRES 8 B 200 LEU PHE ALA ASP ALA GLY ILE ILE CYS ILE ALA SER LEU SEQRES 9 B 200 ILE SER PRO TYR ARG THR ASP ARG ASP ALA CYS ARG SER SEQRES 10 B 200 LEU LEU PRO GLU GLY ASP PHE VAL GLU VAL PHE MET ASP SEQRES 11 B 200 VAL PRO LEU SER VAL CYS GLU ALA ARG ASP PRO LYS GLY SEQRES 12 B 200 LEU TYR LYS LEU ALA ARG ALA GLY LYS ILE LYS GLY PHE SEQRES 13 B 200 THR GLY ILE ASP ASP PRO TYR GLU PRO PRO LEU ASN CYS SEQRES 14 B 200 GLU ILE SER LEU GLY ARG GLU GLY GLY THR SER PRO ILE SEQRES 15 B 200 GLU MET ALA GLU LYS VAL VAL GLY TYR LEU ASP ASN LYS SEQRES 16 B 200 GLY TYR LEU GLN ALA SEQRES 1 C 200 ASN SER THR ASN ILE LYS TRP HIS GLU CYS SER VAL GLU SEQRES 2 C 200 LYS VAL ASP ARG GLN ARG LEU LEU ASP GLN LYS GLY CYS SEQRES 3 C 200 VAL ILE TRP VAL THR GLY LEU SER GLY SER GLY LYS SER SEQRES 4 C 200 THR LEU ALA CYS ALA LEU ASN GLN MET LEU TYR GLN LYS SEQRES 5 C 200 GLY LYS LEU CYS TYR ILE LEU ASP GLY ASP ASN VAL ARG SEQRES 6 C 200 HIS GLY LEU ASN ARG ASP LEU SER PHE LYS ALA GLU ASP SEQRES 7 C 200 ARG ALA GLU ASN ILE ARG ARG VAL GLY GLU VAL ALA LYS SEQRES 8 C 200 LEU PHE ALA ASP ALA GLY ILE ILE CYS ILE ALA SER LEU SEQRES 9 C 200 ILE SER PRO TYR ARG THR ASP ARG ASP ALA CYS ARG SER SEQRES 10 C 200 LEU LEU PRO GLU GLY ASP PHE VAL GLU VAL PHE MET ASP SEQRES 11 C 200 VAL PRO LEU SER VAL CYS GLU ALA ARG ASP PRO LYS GLY SEQRES 12 C 200 LEU TYR LYS LEU ALA ARG ALA GLY LYS ILE LYS GLY PHE SEQRES 13 C 200 THR GLY ILE ASP ASP PRO TYR GLU PRO PRO LEU ASN CYS SEQRES 14 C 200 GLU ILE SER LEU GLY ARG GLU GLY GLY THR SER PRO ILE SEQRES 15 C 200 GLU MET ALA GLU LYS VAL VAL GLY TYR LEU ASP ASN LYS SEQRES 16 C 200 GLY TYR LEU GLN ALA HET ADX A 301 27 HET SO4 A 302 5 HET ADX B 301 27 HET SO4 B 302 5 HET ADX C 301 27 HET SO4 C 302 5 HETNAM ADX ADENOSINE-5'-PHOSPHOSULFATE HETNAM SO4 SULFATE ION FORMUL 4 ADX 3(C10 H14 N5 O10 P S) FORMUL 5 SO4 3(O4 S 2-) FORMUL 10 HOH *391(H2 O) HELIX 1 1 GLU A 89 ASP A 98 1 10 HELIX 2 2 GLY A 113 LYS A 128 1 16 HELIX 3 3 GLY A 137 ARG A 141 1 5 HELIX 4 4 LYS A 151 ALA A 172 1 22 HELIX 5 5 TYR A 184 LEU A 194 1 11 HELIX 6 6 PRO A 208 ASP A 216 1 9 HELIX 7 7 GLY A 219 ALA A 226 1 8 HELIX 8 8 SER A 256 GLY A 272 1 17 HELIX 9 9 GLU B 89 ASP B 98 1 10 HELIX 10 10 GLY B 113 LYS B 128 1 16 HELIX 11 11 GLY B 137 ARG B 141 1 5 HELIX 12 12 LYS B 151 ALA B 172 1 22 HELIX 13 13 TYR B 184 LEU B 194 1 11 HELIX 14 14 PRO B 208 ASP B 216 1 9 HELIX 15 15 GLY B 219 ALA B 226 1 8 HELIX 16 16 SER B 256 LYS B 271 1 16 HELIX 17 17 GLU C 89 ASP C 98 1 10 HELIX 18 18 GLY C 113 LYS C 128 1 16 HELIX 19 19 GLY C 137 ARG C 141 1 5 HELIX 20 20 LYS C 151 ALA C 172 1 22 HELIX 21 21 TYR C 184 LEU C 195 1 12 HELIX 22 22 PRO C 208 ASP C 216 1 9 HELIX 23 23 GLY C 219 ALA C 226 1 8 HELIX 24 24 SER C 256 LYS C 271 1 16 SHEET 1 A 5 CYS A 132 ASP A 136 0 SHEET 2 A 5 ILE A 175 SER A 179 1 O SER A 179 N LEU A 135 SHEET 3 A 5 CYS A 102 THR A 107 1 N VAL A 106 O ALA A 178 SHEET 4 A 5 PHE A 200 MET A 205 1 O VAL A 203 N TRP A 105 SHEET 5 A 5 ILE A 247 LEU A 249 1 O LEU A 249 N PHE A 204 SHEET 1 B 5 CYS B 132 ASP B 136 0 SHEET 2 B 5 ILE B 175 SER B 179 1 O ILE B 177 N LEU B 135 SHEET 3 B 5 CYS B 102 THR B 107 1 N ILE B 104 O CYS B 176 SHEET 4 B 5 PHE B 200 MET B 205 1 O VAL B 203 N TRP B 105 SHEET 5 B 5 ILE B 247 LEU B 249 1 O LEU B 249 N PHE B 204 SHEET 1 C 5 CYS C 132 ASP C 136 0 SHEET 2 C 5 ILE C 175 SER C 179 1 O ILE C 177 N LEU C 135 SHEET 3 C 5 CYS C 102 THR C 107 1 N VAL C 106 O ALA C 178 SHEET 4 C 5 PHE C 200 MET C 205 1 O VAL C 203 N TRP C 105 SHEET 5 C 5 ILE C 247 LEU C 249 1 O LEU C 249 N PHE C 204 SSBOND 1 CYS A 86 CYS A 119 1555 2555 2.04 CISPEP 1 GLY B 253 GLY B 254 0 4.95 SITE 1 AC1 19 GLY A 137 ASP A 138 ARG A 141 PHE A 150 SITE 2 AC1 19 ARG A 155 ASN A 158 ILE A 159 LEU A 180 SITE 3 AC1 19 ILE A 181 SER A 182 PRO A 183 LYS A 218 SITE 4 AC1 19 ILE A 229 GLY A 231 PHE A 232 THR A 233 SITE 5 AC1 19 HOH A 406 HOH A 534 HOH A 549 SITE 1 AC2 9 LEU A 109 SER A 110 GLY A 111 SER A 112 SITE 2 AC2 9 GLY A 113 LYS A 114 SER A 115 HOH A 424 SITE 3 AC2 9 HOH A 452 SITE 1 AC3 18 GLY B 137 ASP B 138 ARG B 141 PHE B 150 SITE 2 AC3 18 ARG B 155 ASN B 158 LEU B 180 ILE B 181 SITE 3 AC3 18 SER B 182 PRO B 183 LYS B 218 LEU B 220 SITE 4 AC3 18 LYS B 230 GLY B 231 PHE B 232 THR B 233 SITE 5 AC3 18 HOH B 439 HOH B 452 SITE 1 AC4 8 LEU B 109 GLY B 111 SER B 112 GLY B 113 SITE 2 AC4 8 LYS B 114 SER B 115 HOH B 411 HOH B 484 SITE 1 AC5 21 THR B 79 ASN B 80 ILE B 81 GLY C 137 SITE 2 AC5 21 ASP C 138 ARG C 141 PHE C 150 ARG C 155 SITE 3 AC5 21 ASN C 158 LEU C 180 ILE C 181 SER C 182 SITE 4 AC5 21 PRO C 183 LYS C 218 LYS C 230 GLY C 231 SITE 5 AC5 21 PHE C 232 THR C 233 HOH C 405 HOH C 419 SITE 6 AC5 21 HOH C 425 SITE 1 AC6 7 LEU C 109 GLY C 111 SER C 112 GLY C 113 SITE 2 AC6 7 LYS C 114 SER C 115 HOH C 450 CRYST1 120.948 92.348 73.183 90.00 113.52 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008268 0.000000 0.003598 0.00000 SCALE2 0.000000 0.010829 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014902 0.00000