HEADER TRANSPORT PROTEIN 10-JUL-12 4G0S TITLE CRYSTAL STRUCTURE OF EPIPHYAS POSTVITTANA TAKEOUT 1 EXPRESSED IN SF9 TITLE 2 CELLS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAKEOUT-LIKE PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EPIPHYAS POSTVITTANA; SOURCE 3 ORGANISM_COMMON: LIGHT BROWN APPLE MOTH; SOURCE 4 ORGANISM_TAXID: 65032; SOURCE 5 GENE: TAKEOUT 1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST8 KEYWDS TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.HAMIAUX,E.N.BAKER,R.D.NEWCOMB REVDAT 3 13-SEP-23 4G0S 1 REMARK REVDAT 2 12-JUN-13 4G0S 1 JRNL REVDAT 1 01-MAY-13 4G0S 0 JRNL AUTH C.HAMIAUX,L.BASTEN,D.R.GREENWOOD,E.N.BAKER,R.D.NEWCOMB JRNL TITL LIGAND PROMISCUITY WITHIN THE INTERNAL CAVITY OF EPIPHYAS JRNL TITL 2 POSTVITTANA TAKEOUT 1 PROTEIN. JRNL REF J.STRUCT.BIOL. V. 182 259 2013 JRNL REFN ISSN 1047-8477 JRNL PMID 23563188 JRNL DOI 10.1016/J.JSB.2013.03.013 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH C.HAMIAUX,D.STANLEY,D.R.GREENWOOD,E.N.BAKER,R.D.NEWCOMB REMARK 1 TITL CRYSTAL STRUCTURE OF EPIPHYAS POSTVITTANA TAKEOUT 1 WITH REMARK 1 TITL 2 BOUND UBIQUINONE SUPPORTS A ROLE AS LIGAND CARRIERS FOR REMARK 1 TITL 3 TAKEOUT PROTEINS IN INSECTS. REMARK 1 REF J.BIOL.CHEM. V. 284 3496 2009 REMARK 1 REFN ISSN 0021-9258 REMARK 1 PMID 19073605 REMARK 1 DOI 10.1074/JBC.M807467200 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 22345 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1051 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1291 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.4540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3438 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -21.62000 REMARK 3 B22 (A**2) : -21.37000 REMARK 3 B33 (A**2) : 42.98000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.24000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.067 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.054 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.145 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.732 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3566 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4790 ; 1.853 ; 1.973 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 436 ; 8.260 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 152 ;39.785 ;26.316 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 654 ;19.982 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;13.730 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 542 ; 0.113 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2578 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 220 4 REMARK 3 1 B 2 B 220 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1719 ; 0.300 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1719 ; 1.920 ; 2.000 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.546 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : H,-K,-L REMARK 3 TWIN FRACTION : 0.454 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 220 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3480 -6.4430 13.6250 REMARK 3 T TENSOR REMARK 3 T11: 0.1308 T22: 0.0983 REMARK 3 T33: 0.0292 T12: 0.0054 REMARK 3 T13: -0.0337 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.4670 L22: 0.9399 REMARK 3 L33: 0.3498 L12: -0.2251 REMARK 3 L13: -0.1030 L23: 0.4266 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.0419 S13: 0.0825 REMARK 3 S21: -0.0363 S22: 0.0055 S23: -0.0095 REMARK 3 S31: 0.0573 S32: 0.0371 S33: 0.0051 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 220 REMARK 3 ORIGIN FOR THE GROUP (A): 31.3170 -20.8730 30.7530 REMARK 3 T TENSOR REMARK 3 T11: 0.1317 T22: 0.1024 REMARK 3 T33: 0.0187 T12: 0.0089 REMARK 3 T13: -0.0370 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 0.3475 L22: 0.8336 REMARK 3 L33: 0.2362 L12: 0.1444 REMARK 3 L13: 0.0928 L23: 0.3620 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.0199 S13: -0.0432 REMARK 3 S21: -0.0007 S22: 0.0059 S23: -0.0115 REMARK 3 S31: -0.0327 S32: 0.0018 S33: 0.0066 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4G0S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95468 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22359 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.191 REMARK 200 RESOLUTION RANGE LOW (A) : 45.835 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : 0.13000 REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.34900 REMARK 200 R SYM FOR SHELL (I) : 0.34900 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 3E8T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 26-31% PEG 3000, PH 6.0, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.59200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 76 CE2 TRP A 76 CD2 0.074 REMARK 500 HIS A 207 CG HIS A 207 CD2 0.057 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 40 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 LEU A 116 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 34 -155.55 -94.78 REMARK 500 GLU A 60 60.04 32.78 REMARK 500 LYS A 81 56.35 36.14 REMARK 500 LEU A 104 -109.45 57.86 REMARK 500 ASP A 134 -153.37 -96.00 REMARK 500 ASP A 151 96.04 -173.41 REMARK 500 PHE A 164 42.27 35.14 REMARK 500 ASN A 181 46.31 -95.93 REMARK 500 ASN A 219 83.52 -69.00 REMARK 500 ASP B 40 112.62 -160.71 REMARK 500 ALA B 48 133.63 -173.32 REMARK 500 LYS B 81 65.17 63.01 REMARK 500 LEU B 104 -124.29 48.89 REMARK 500 ASP B 111 95.59 -162.05 REMARK 500 LYS B 144 -58.11 -125.18 REMARK 500 ASN B 155 146.07 -173.26 REMARK 500 ASN B 181 40.88 -105.44 REMARK 500 ALA B 218 -164.75 -172.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYR A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYR A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYR B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MYR B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3E8T RELATED DB: PDB REMARK 900 SAME PROTEIN, EXPRESSED IN E.COLI REMARK 900 RELATED ID: 3E8W RELATED DB: PDB REMARK 900 SAME PROTEIN, EXPRESSED IN E.COLI DBREF 4G0S A 1 220 UNP B5ABT1 B5ABT1_EPIPO 21 240 DBREF 4G0S B 1 220 UNP B5ABT1 B5ABT1_EPIPO 21 240 SEQRES 1 A 220 GLY VAL LEU PRO VAL GLU LYS CYS ASN LEU GLU ASP SER SEQRES 2 A 220 ALA CYS MET THR SER ALA PHE GLN GLN ALA LEU PRO THR SEQRES 3 A 220 PHE VAL ALA GLY LEU PRO ASP HIS GLY VAL GLU VAL MET SEQRES 4 A 220 ASP VAL LEU ASP LEU ASP ASP PHE ALA PHE ASP LEU SER SEQRES 5 A 220 GLY LEU GLN PHE THR LEU LYS GLU GLY LYS LEU LYS GLY SEQRES 6 A 220 LEU LYS GLY ALA VAL ILE ASP ASN VAL LYS TRP ASP LEU SEQRES 7 A 220 LYS LYS LYS ASN ILE GLU VAL ASP PHE HIS LEU ASP ALA SEQRES 8 A 220 THR VAL LYS GLY HIS TYR THR ALA GLY GLY ARG ILE LEU SEQRES 9 A 220 ILE LEU PRO ILE THR GLY ASP GLY GLN MET LYS LEU LYS SEQRES 10 A 220 LEU LYS ASN ILE HIS ILE HIS LEU VAL VAL SER TYR GLU SEQRES 11 A 220 MET GLU LYS ASP ALA GLU GLY VAL ASP HIS VAL ILE PHE SEQRES 12 A 220 LYS LYS TYR THR VAL THR PHE ASP VAL LYS ASP ASN ALA SEQRES 13 A 220 GLN PHE GLY LEU THR ASN LEU PHE ASN GLY ASN LYS GLU SEQRES 14 A 220 LEU SER ASP THR MET LEU THR PHE LEU ASN GLN ASN TRP SEQRES 15 A 220 LYS GLN VAL SER GLU GLU PHE GLY LYS PRO VAL MET GLU SEQRES 16 A 220 ALA ALA ALA LYS LYS ILE PHE LYS ASN ILE LYS HIS PHE SEQRES 17 A 220 LEU ALA LYS VAL PRO ILE ALA GLU ILE ALA ASN VAL SEQRES 1 B 220 GLY VAL LEU PRO VAL GLU LYS CYS ASN LEU GLU ASP SER SEQRES 2 B 220 ALA CYS MET THR SER ALA PHE GLN GLN ALA LEU PRO THR SEQRES 3 B 220 PHE VAL ALA GLY LEU PRO ASP HIS GLY VAL GLU VAL MET SEQRES 4 B 220 ASP VAL LEU ASP LEU ASP ASP PHE ALA PHE ASP LEU SER SEQRES 5 B 220 GLY LEU GLN PHE THR LEU LYS GLU GLY LYS LEU LYS GLY SEQRES 6 B 220 LEU LYS GLY ALA VAL ILE ASP ASN VAL LYS TRP ASP LEU SEQRES 7 B 220 LYS LYS LYS ASN ILE GLU VAL ASP PHE HIS LEU ASP ALA SEQRES 8 B 220 THR VAL LYS GLY HIS TYR THR ALA GLY GLY ARG ILE LEU SEQRES 9 B 220 ILE LEU PRO ILE THR GLY ASP GLY GLN MET LYS LEU LYS SEQRES 10 B 220 LEU LYS ASN ILE HIS ILE HIS LEU VAL VAL SER TYR GLU SEQRES 11 B 220 MET GLU LYS ASP ALA GLU GLY VAL ASP HIS VAL ILE PHE SEQRES 12 B 220 LYS LYS TYR THR VAL THR PHE ASP VAL LYS ASP ASN ALA SEQRES 13 B 220 GLN PHE GLY LEU THR ASN LEU PHE ASN GLY ASN LYS GLU SEQRES 14 B 220 LEU SER ASP THR MET LEU THR PHE LEU ASN GLN ASN TRP SEQRES 15 B 220 LYS GLN VAL SER GLU GLU PHE GLY LYS PRO VAL MET GLU SEQRES 16 B 220 ALA ALA ALA LYS LYS ILE PHE LYS ASN ILE LYS HIS PHE SEQRES 17 B 220 LEU ALA LYS VAL PRO ILE ALA GLU ILE ALA ASN VAL HET MYR A 300 16 HET MYR A 301 16 HET MYR B 300 16 HET MYR B 301 16 HETNAM MYR MYRISTIC ACID FORMUL 3 MYR 4(C14 H28 O2) FORMUL 7 HOH *103(H2 O) HELIX 1 1 ASP A 12 VAL A 28 1 17 HELIX 2 2 GLY A 65 ALA A 69 5 5 HELIX 3 3 ASN A 162 GLY A 166 5 5 HELIX 4 4 ASN A 167 ASN A 181 1 15 HELIX 5 5 ASN A 181 GLY A 190 1 10 HELIX 6 6 GLY A 190 VAL A 212 1 23 HELIX 7 7 PRO A 213 ALA A 218 1 6 HELIX 8 8 ASP B 12 GLY B 30 1 19 HELIX 9 9 GLY B 65 ALA B 69 5 5 HELIX 10 10 ASN B 162 GLY B 166 5 5 HELIX 11 11 ASN B 167 ASN B 181 1 15 HELIX 12 12 ASN B 181 VAL B 212 1 32 HELIX 13 13 ILE B 214 ALA B 218 5 5 SHEET 1 A 6 LEU A 106 PRO A 107 0 SHEET 2 A 6 ASN A 82 ILE A 103 -1 N ILE A 103 O LEU A 106 SHEET 3 A 6 LEU A 54 LYS A 64 -1 N LYS A 59 O HIS A 96 SHEET 4 A 6 PHE A 47 LEU A 51 -1 N PHE A 49 O PHE A 56 SHEET 5 A 6 LEU A 54 LYS A 64 -1 O PHE A 56 N PHE A 49 SHEET 6 A 6 LEU A 42 LEU A 44 -1 N LEU A 44 O GLY A 61 SHEET 1 B 4 ASP A 139 LEU A 160 0 SHEET 2 B 4 GLY A 110 LYS A 133 -1 N HIS A 122 O ASP A 151 SHEET 3 B 4 ASN A 82 ILE A 103 -1 N VAL A 85 O LEU A 125 SHEET 4 B 4 VAL A 70 ASP A 77 -1 N VAL A 70 O HIS A 88 SHEET 1 C 4 LEU B 42 LEU B 44 0 SHEET 2 C 4 LEU B 54 LYS B 64 -1 O LEU B 63 N LEU B 42 SHEET 3 C 4 ASN B 82 ILE B 103 -1 O HIS B 96 N LYS B 59 SHEET 4 C 4 VAL B 70 ASP B 77 -1 N VAL B 70 O HIS B 88 SHEET 1 D 5 PHE B 47 LEU B 51 0 SHEET 2 D 5 LEU B 54 LYS B 64 -1 O LEU B 54 N LEU B 51 SHEET 3 D 5 ASN B 82 ILE B 103 -1 O HIS B 96 N LYS B 59 SHEET 4 D 5 LEU B 106 LYS B 133 -1 O LEU B 116 N VAL B 93 SHEET 5 D 5 ASP B 139 LEU B 160 -1 O ILE B 142 N GLU B 130 SSBOND 1 CYS A 8 CYS A 15 1555 1555 2.03 SSBOND 2 CYS B 8 CYS B 15 1555 1555 2.03 CISPEP 1 ASP A 40 VAL A 41 0 9.33 CISPEP 2 ASP B 40 VAL B 41 0 -6.90 SITE 1 AC1 5 CYS A 8 MET A 16 LEU A 24 PHE A 27 SITE 2 AC1 5 ILE A 217 SITE 1 AC2 5 LEU A 116 LEU A 118 ILE A 121 GLY A 190 SITE 2 AC2 5 MET A 194 SITE 1 AC3 6 GLU B 6 LYS B 7 CYS B 8 ALA B 19 SITE 2 AC3 6 PHE B 27 ILE B 217 SITE 1 AC4 6 PHE B 56 ILE B 103 LEU B 116 GLY B 190 SITE 2 AC4 6 VAL B 193 MET B 194 CRYST1 45.835 55.184 87.279 90.00 90.22 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021817 0.000000 0.000086 0.00000 SCALE2 0.000000 0.018121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011458 0.00000