HEADER TRANSFERASE 13-JUL-12 4G3C TITLE CRYSTAL STRUCTURE OF APO MURINE NF-KAPPAB INDUCING KINASE (NIK) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NF-KAPPA-BETA-INDUCING KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SERINE/THREONINE-PROTEIN KINASE NIK; COMPND 5 EC: 2.7.11.25; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: MAP3K14, NF-KABBAB INDUCING KINASE, NIK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS TRANSFER VECTOR; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PACGP67 KEYWDS NON-RD KINASE, PROTEIN SERINE/THREONINE KINASE, NF-KAPPAB, MAP3K14, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.G.HYMOWITZ,G.DE LEON-BOENIG REVDAT 5 03-APR-24 4G3C 1 REMARK REVDAT 4 28-FEB-24 4G3C 1 REMARK SEQADV REVDAT 3 24-JAN-18 4G3C 1 AUTHOR REVDAT 2 23-JAN-13 4G3C 1 JRNL REVDAT 1 08-AUG-12 4G3C 0 JRNL AUTH G.DE LEON-BOENIG,K.K.BOWMAN,J.A.FENG,T.CRAWFORD,C.EVERETT, JRNL AUTH 2 Y.FRANKE,A.OH,M.STANLEY,S.T.STABEN,M.A.STAROVASNIK, JRNL AUTH 3 H.J.WALLWEBER,J.WU,L.C.WU,A.R.JOHNSON,S.G.HYMOWITZ JRNL TITL THE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF THE JRNL TITL 2 NF-KAPPAB INDUCING KINASE REVEALS A NARROW BUT FLEXIBLE JRNL TITL 3 ACTIVE SITE. JRNL REF STRUCTURE V. 20 1704 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22921830 JRNL DOI 10.1016/J.STR.2012.07.013 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 44453 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.100 REMARK 3 FREE R VALUE TEST SET COUNT : 5003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 25 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2470 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 280 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4990 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 192 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.24000 REMARK 3 B22 (A**2) : -0.24000 REMARK 3 B33 (A**2) : 0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.196 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.173 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.892 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5150 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6972 ; 1.102 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 645 ; 5.378 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 215 ;32.774 ;23.442 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 899 ;13.995 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;19.666 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 755 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3857 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 334 A 472 REMARK 3 ORIGIN FOR THE GROUP (A): 45.6611 39.8679 -3.2365 REMARK 3 T TENSOR REMARK 3 T11: 0.0492 T22: 0.0517 REMARK 3 T33: 0.1295 T12: 0.0468 REMARK 3 T13: 0.0523 T23: 0.0371 REMARK 3 L TENSOR REMARK 3 L11: 1.8312 L22: 2.5824 REMARK 3 L33: 0.8857 L12: -0.1817 REMARK 3 L13: 0.1128 L23: 0.4378 REMARK 3 S TENSOR REMARK 3 S11: 0.0609 S12: 0.0242 S13: 0.2484 REMARK 3 S21: 0.0209 S22: -0.0711 S23: -0.0842 REMARK 3 S31: 0.0201 S32: -0.0113 S33: 0.0102 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 473 A 671 REMARK 3 ORIGIN FOR THE GROUP (A): 52.6668 12.6661 -4.2930 REMARK 3 T TENSOR REMARK 3 T11: 0.1261 T22: 0.0335 REMARK 3 T33: 0.0094 T12: 0.0466 REMARK 3 T13: 0.0202 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.1725 L22: 2.0695 REMARK 3 L33: 1.4715 L12: -0.1094 REMARK 3 L13: -0.4203 L23: -0.8527 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: 0.0980 S13: -0.0630 REMARK 3 S21: -0.0918 S22: -0.0829 S23: -0.0738 REMARK 3 S31: 0.1698 S32: 0.0461 S33: 0.0622 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 334 B 472 REMARK 3 ORIGIN FOR THE GROUP (A): 30.8999 66.9831 2.5281 REMARK 3 T TENSOR REMARK 3 T11: 0.0160 T22: 0.0141 REMARK 3 T33: 0.1124 T12: 0.0007 REMARK 3 T13: 0.0098 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 2.0351 L22: 2.5433 REMARK 3 L33: 1.5748 L12: 0.5796 REMARK 3 L13: 0.0906 L23: 0.2812 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: -0.0448 S13: 0.0323 REMARK 3 S21: 0.0192 S22: -0.0085 S23: -0.2448 REMARK 3 S31: -0.0211 S32: 0.0478 S33: 0.0158 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 473 B 674 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4444 42.7844 1.0765 REMARK 3 T TENSOR REMARK 3 T11: 0.0459 T22: 0.0792 REMARK 3 T33: 0.0127 T12: -0.0220 REMARK 3 T13: -0.0061 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 1.4675 L22: 2.0214 REMARK 3 L33: 2.4482 L12: 0.0014 REMARK 3 L13: 0.1007 L23: 0.0261 REMARK 3 S TENSOR REMARK 3 S11: 0.1088 S12: -0.0490 S13: -0.0518 REMARK 3 S21: 0.0152 S22: -0.0585 S23: 0.0195 REMARK 3 S31: 0.2715 S32: 0.0106 S33: -0.0503 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4G3C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073685. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97740 REMARK 200 MONOCHROMATOR : SI(220) ASYMMETRIC CUT SINGLE REMARK 200 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49462 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.58400 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: HOMOLOGY MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2UL PROTEIN WITH 2UL WELL SOLUTION OF REMARK 280 0.5 M AMMONIUM SULFATE, 0.9 M LITHIUM SULFATE,0.1M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE , PH 6.2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 276K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.54150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.81225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.27075 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 327 REMARK 465 SER A 328 REMARK 465 ALA A 329 REMARK 465 LEU A 330 REMARK 465 GLU A 331 REMARK 465 LYS A 332 REMARK 465 VAL A 333 REMARK 465 SER A 364 REMARK 465 GLY A 365 REMARK 465 SER A 366 REMARK 465 ALA A 367 REMARK 465 LYS A 368 REMARK 465 LEU A 369 REMARK 465 GLN A 370 REMARK 465 ARG A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 PRO A 374 REMARK 465 GLU A 375 REMARK 465 THR A 376 REMARK 465 GLU A 377 REMARK 465 PRO A 545 REMARK 465 ASP A 546 REMARK 465 GLY A 547 REMARK 465 LEU A 548 REMARK 465 GLY A 549 REMARK 465 LYS A 550 REMARK 465 SER A 551 REMARK 465 LEU A 552 REMARK 465 LEU A 553 REMARK 465 THR A 554 REMARK 465 GLY A 555 REMARK 465 ASP A 556 REMARK 465 TYR A 557 REMARK 465 GLY A 676 REMARK 465 ASN A 677 REMARK 465 SER A 678 REMARK 465 GLY B 327 REMARK 465 SER B 328 REMARK 465 ALA B 329 REMARK 465 LEU B 330 REMARK 465 GLU B 331 REMARK 465 LYS B 332 REMARK 465 VAL B 333 REMARK 465 SER B 364 REMARK 465 GLY B 365 REMARK 465 SER B 366 REMARK 465 ALA B 367 REMARK 465 LYS B 368 REMARK 465 LEU B 369 REMARK 465 GLN B 370 REMARK 465 ARG B 371 REMARK 465 LEU B 372 REMARK 465 GLY B 373 REMARK 465 PRO B 374 REMARK 465 GLU B 375 REMARK 465 THR B 376 REMARK 465 GLU B 377 REMARK 465 ARG B 675 REMARK 465 GLY B 676 REMARK 465 ASN B 677 REMARK 465 SER B 678 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL A 430 CB - CA - C ANGL. DEV. = -11.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 405 -135.86 35.97 REMARK 500 ASP A 517 56.91 -149.07 REMARK 500 ASP A 536 97.29 68.68 REMARK 500 TYR A 601 -29.11 73.19 REMARK 500 PRO A 616 36.27 -73.72 REMARK 500 LYS A 668 -113.80 65.58 REMARK 500 GLU B 398 -0.12 67.12 REMARK 500 GLN B 405 -132.69 34.30 REMARK 500 VAL B 408 -75.94 -103.01 REMARK 500 ARG B 410 -169.21 -123.33 REMARK 500 ASP B 517 55.42 -151.20 REMARK 500 ASP B 536 96.03 66.80 REMARK 500 PRO B 545 -18.25 -47.32 REMARK 500 LEU B 553 48.59 76.41 REMARK 500 ASP B 576 -164.67 -125.01 REMARK 500 PRO B 616 41.24 -75.63 REMARK 500 LYS B 668 -141.65 66.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 703 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4G3D RELATED DB: PDB REMARK 900 RELATED ID: 4G3E RELATED DB: PDB REMARK 900 RELATED ID: 4G3F RELATED DB: PDB REMARK 900 RELATED ID: 4G3G RELATED DB: PDB DBREF 4G3C A 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 DBREF 4G3C B 329 675 UNP Q9WUL6 M3K14_MOUSE 329 675 SEQADV 4G3C GLY A 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C SER A 328 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C GLY A 676 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C ASN A 677 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C SER A 678 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C GLY B 327 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C SER B 328 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C GLY B 676 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C ASN B 677 UNP Q9WUL6 EXPRESSION TAG SEQADV 4G3C SER B 678 UNP Q9WUL6 EXPRESSION TAG SEQRES 1 A 352 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 A 352 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 A 352 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 A 352 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 A 352 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 A 352 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 A 352 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 A 352 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 A 352 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 A 352 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 A 352 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 A 352 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 A 352 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 A 352 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 A 352 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 A 352 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 A 352 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 A 352 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 A 352 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 A 352 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 A 352 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 A 352 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 A 352 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 A 352 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 A 352 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 A 352 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 A 352 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG GLY ASN SEQRES 28 A 352 SER SEQRES 1 B 352 GLY SER ALA LEU GLU LYS VAL PRO VAL GLU GLU TYR LEU SEQRES 2 B 352 VAL HIS ALA LEU GLN GLY SER VAL SER SER GLY GLN ALA SEQRES 3 B 352 HIS SER LEU ALA SER LEU ALA LYS THR TRP SER SER GLY SEQRES 4 B 352 SER ALA LYS LEU GLN ARG LEU GLY PRO GLU THR GLU ASP SEQRES 5 B 352 ASN GLU GLY VAL LEU LEU THR GLU LYS LEU LYS PRO VAL SEQRES 6 B 352 ASP TYR GLU TYR ARG GLU GLU VAL HIS TRP MET THR HIS SEQRES 7 B 352 GLN PRO ARG VAL GLY ARG GLY SER PHE GLY GLU VAL HIS SEQRES 8 B 352 ARG MET LYS ASP LYS GLN THR GLY PHE GLN CYS ALA VAL SEQRES 9 B 352 LYS LYS VAL ARG LEU GLU VAL PHE ARG VAL GLU GLU LEU SEQRES 10 B 352 VAL ALA CYS ALA GLY LEU SER SER PRO ARG ILE VAL PRO SEQRES 11 B 352 LEU TYR GLY ALA VAL ARG GLU GLY PRO TRP VAL ASN ILE SEQRES 12 B 352 PHE MET GLU LEU LEU GLU GLY GLY SER LEU GLY GLN LEU SEQRES 13 B 352 ILE LYS GLN MET GLY CYS LEU PRO GLU ASP ARG ALA LEU SEQRES 14 B 352 TYR TYR LEU GLY GLN ALA LEU GLU GLY LEU GLU TYR LEU SEQRES 15 B 352 HIS THR ARG ARG ILE LEU HIS GLY ASP VAL LYS ALA ASP SEQRES 16 B 352 ASN VAL LEU LEU SER SER ASP GLY SER ARG ALA ALA LEU SEQRES 17 B 352 CYS ASP PHE GLY HIS ALA LEU CYS LEU GLN PRO ASP GLY SEQRES 18 B 352 LEU GLY LYS SER LEU LEU THR GLY ASP TYR ILE PRO GLY SEQRES 19 B 352 THR GLU THR HIS MET ALA PRO GLU VAL VAL MET GLY LYS SEQRES 20 B 352 PRO CYS ASP ALA LYS VAL ASP ILE TRP SER SER CYS CYS SEQRES 21 B 352 MET MET LEU HIS MET LEU ASN GLY CYS HIS PRO TRP THR SEQRES 22 B 352 GLN TYR PHE ARG GLY PRO LEU CYS LEU LYS ILE ALA SER SEQRES 23 B 352 GLU PRO PRO PRO ILE ARG GLU ILE PRO PRO SER CYS ALA SEQRES 24 B 352 PRO LEU THR ALA GLN ALA ILE GLN GLU GLY LEU ARG LYS SEQRES 25 B 352 GLU PRO VAL HIS ARG ALA SER ALA MET GLU LEU ARG ARG SEQRES 26 B 352 LYS VAL GLY LYS ALA LEU GLN GLU VAL GLY GLY LEU LYS SEQRES 27 B 352 SER PRO TRP LYS GLY GLU TYR LYS GLU PRO ARG GLY ASN SEQRES 28 B 352 SER HET SO4 A 701 5 HET SO4 A 702 5 HET SO4 A 703 5 HET SO4 B 701 5 HET SO4 B 702 5 HET SO4 B 703 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 6(O4 S 2-) FORMUL 9 HOH *192(H2 O) HELIX 1 1 PRO A 334 GLN A 344 1 11 HELIX 2 2 GLN A 351 LYS A 360 1 10 HELIX 3 3 THR A 361 SER A 363 5 3 HELIX 4 4 GLU A 436 ARG A 439 5 4 HELIX 5 5 VAL A 440 ALA A 445 1 6 HELIX 6 6 LEU A 479 GLY A 487 1 9 HELIX 7 7 PRO A 490 ARG A 511 1 22 HELIX 8 8 LYS A 519 ASP A 521 5 3 HELIX 9 9 THR A 561 MET A 565 5 5 HELIX 10 10 ALA A 566 MET A 571 1 6 HELIX 11 11 ALA A 577 GLY A 594 1 18 HELIX 12 12 PRO A 605 GLU A 613 1 9 HELIX 13 13 PRO A 615 ILE A 620 5 6 HELIX 14 14 ALA A 625 LEU A 636 1 12 HELIX 15 15 GLU A 639 ARG A 643 5 5 HELIX 16 16 SER A 645 VAL A 660 1 16 HELIX 17 17 VAL B 335 GLN B 344 1 10 HELIX 18 18 GLN B 351 LYS B 360 1 10 HELIX 19 19 THR B 361 SER B 363 5 3 HELIX 20 20 GLU B 436 ARG B 439 5 4 HELIX 21 21 VAL B 440 ALA B 445 1 6 HELIX 22 22 SER B 478 GLY B 487 1 10 HELIX 23 23 PRO B 490 ARG B 511 1 22 HELIX 24 24 LYS B 519 ASP B 521 5 3 HELIX 25 25 THR B 561 MET B 565 5 5 HELIX 26 26 ALA B 566 MET B 571 1 6 HELIX 27 27 ALA B 577 GLY B 594 1 18 HELIX 28 28 PRO B 605 GLU B 613 1 9 HELIX 29 29 PRO B 616 ILE B 620 5 5 HELIX 30 30 ALA B 625 LEU B 636 1 12 HELIX 31 31 SER B 645 VAL B 660 1 16 SHEET 1 A 7 VAL A 347 SER A 349 0 SHEET 2 A 7 ASN A 379 LEU A 383 1 O LEU A 383 N SER A 348 SHEET 3 A 7 LEU A 457 GLU A 463 -1 O ARG A 462 N GLU A 380 SHEET 4 A 7 TRP A 466 MET A 471 -1 O ASN A 468 N VAL A 461 SHEET 5 A 7 GLN A 427 ARG A 434 -1 N VAL A 433 O VAL A 467 SHEET 6 A 7 VAL A 416 ASP A 421 -1 N MET A 419 O CYS A 428 SHEET 7 A 7 TRP A 401 THR A 403 -1 N MET A 402 O LYS A 420 SHEET 1 B 3 GLY A 477 SER A 478 0 SHEET 2 B 3 VAL A 523 LEU A 525 -1 O LEU A 525 N GLY A 477 SHEET 3 B 3 ALA A 532 LEU A 534 -1 O ALA A 533 N LEU A 524 SHEET 1 C 2 ILE A 513 LEU A 514 0 SHEET 2 C 2 LEU A 541 CYS A 542 -1 O LEU A 541 N LEU A 514 SHEET 1 D 7 VAL B 347 SER B 349 0 SHEET 2 D 7 ASN B 379 LEU B 383 1 O LEU B 383 N SER B 348 SHEET 3 D 7 LEU B 457 GLU B 463 -1 O ARG B 462 N GLU B 380 SHEET 4 D 7 TRP B 466 MET B 471 -1 O PHE B 470 N TYR B 458 SHEET 5 D 7 GLN B 427 ARG B 434 -1 N LYS B 431 O ILE B 469 SHEET 6 D 7 VAL B 416 ASP B 421 -1 N MET B 419 O CYS B 428 SHEET 7 D 7 TRP B 401 THR B 403 -1 N MET B 402 O LYS B 420 SHEET 1 E 2 ILE B 513 LEU B 514 0 SHEET 2 E 2 LEU B 541 CYS B 542 -1 O LEU B 541 N LEU B 514 SHEET 1 F 2 VAL B 523 LEU B 525 0 SHEET 2 F 2 ALA B 532 LEU B 534 -1 O ALA B 533 N LEU B 524 SITE 1 AC1 8 CYS A 446 VAL A 455 MET A 471 LEU A 534 SITE 2 AC1 8 CYS A 535 ASP A 536 PHE A 537 HOH A 873 SITE 1 AC2 2 ARG A 650 ARG A 651 SITE 1 AC3 4 ARG A 637 LYS A 638 GLU A 639 HIS A 642 SITE 1 AC4 8 CYS B 446 VAL B 455 MET B 471 LEU B 534 SITE 2 AC4 8 CYS B 535 ASP B 536 PHE B 537 HOH B 883 SITE 1 AC5 2 TYR B 507 ARG B 511 SITE 1 AC6 4 ARG B 637 LYS B 638 GLU B 639 HIS B 642 CRYST1 142.211 142.211 45.083 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007032 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007032 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022181 0.00000