HEADER IMMUNE SYSTEM 16-JUL-12 4G4F TITLE CRYSTAL STRUCTURE OF GITRL FROM BUSHBABY COMPND MOL_ID: 1; COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 18; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OTOLEMUR GARNETTII; SOURCE 3 ORGANISM_TAXID: 30611; SOURCE 4 GENE: GITRL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS GLUCOCORTICOID-INDUCED TNF RECEPTOR LIGAND, IMMUNE SYSTEM, TNFRSF18, KEYWDS 2 STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS KEYWDS 3 RESEARCH CONSORTIUM (NYSGRC), ATOMS-TO-ANIMALS: THE IMMUNE FUNCTION KEYWDS 4 NETWORK, IFN EXPDTA X-RAY DIFFRACTION AUTHOR P.R.KUMAR,R.BHOSLE,S.G.NATHENSON,S.C.ALMO,NEW YORK STRUCTURAL AUTHOR 2 GENOMICS RESEARCH CONSORTIUM (NYSGRC),ATOMS-TO-ANIMALS: THE IMMUNE AUTHOR 3 FUNCTION NETWORK (IFN) REVDAT 2 13-SEP-23 4G4F 1 REMARK REVDAT 1 01-AUG-12 4G4F 0 JRNL AUTH P.R.KUMAR,S.G.NATHENSON,S.C.ALMO, JRNL AUTH 2 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC), JRNL AUTH 3 ATOMS-TO-ANIMALS: THE IMMUNE FUNCTION NETWORK (IFN) JRNL TITL CRYSTAL STRUCTURE OF GITRL FROM OTOLEMUR GARNETTII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 10699 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1575 - 2.9318 1.00 2739 116 0.1938 0.2090 REMARK 3 2 2.9318 - 2.3271 1.00 2528 138 0.2200 0.2468 REMARK 3 3 2.3271 - 2.0330 1.00 2469 140 0.2164 0.2980 REMARK 3 4 2.0330 - 1.8471 0.99 2449 120 0.2429 0.3095 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 936 REMARK 3 ANGLE : 1.121 1269 REMARK 3 CHIRALITY : 0.084 145 REMARK 3 PLANARITY : 0.004 159 REMARK 3 DIHEDRAL : 14.453 343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5400 -3.1185 -9.8091 REMARK 3 T TENSOR REMARK 3 T11: 0.3181 T22: 0.2466 REMARK 3 T33: 0.3685 T12: 0.0418 REMARK 3 T13: 0.0022 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 3.9184 L22: 9.0945 REMARK 3 L33: 6.5613 L12: 0.7735 REMARK 3 L13: 0.3205 L23: -5.2627 REMARK 3 S TENSOR REMARK 3 S11: -0.1171 S12: -0.1681 S13: 0.3925 REMARK 3 S21: 0.4800 S22: 0.0188 S23: 0.3030 REMARK 3 S31: -0.3072 S32: -0.1709 S33: 0.0143 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0328 -9.8625 -13.7410 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.2301 REMARK 3 T33: 0.2849 T12: -0.0046 REMARK 3 T13: 0.0237 T23: -0.0217 REMARK 3 L TENSOR REMARK 3 L11: 4.1499 L22: 2.2601 REMARK 3 L33: 2.3427 L12: 0.5284 REMARK 3 L13: 0.6940 L23: -0.2959 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: -0.0256 S13: 0.1521 REMARK 3 S21: 0.1613 S22: -0.0215 S23: -0.2406 REMARK 3 S31: -0.0820 S32: 0.2681 S33: 0.0667 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0452 -11.5652 -24.9679 REMARK 3 T TENSOR REMARK 3 T11: 0.2750 T22: 0.2769 REMARK 3 T33: 0.3230 T12: -0.0133 REMARK 3 T13: 0.0104 T23: -0.0528 REMARK 3 L TENSOR REMARK 3 L11: 4.3694 L22: 4.8396 REMARK 3 L33: 6.6456 L12: -4.0562 REMARK 3 L13: 4.6882 L23: -4.5454 REMARK 3 S TENSOR REMARK 3 S11: 0.3468 S12: 0.4115 S13: -0.1770 REMARK 3 S21: -0.4514 S22: -0.2160 S23: 0.1309 REMARK 3 S31: 0.4289 S32: 0.2318 S33: -0.1797 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.0415 -5.4672 -20.5477 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.2678 REMARK 3 T33: 0.2735 T12: -0.0539 REMARK 3 T13: -0.0102 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 4.6343 L22: 4.2339 REMARK 3 L33: 3.5491 L12: -0.7453 REMARK 3 L13: 0.8835 L23: 0.1685 REMARK 3 S TENSOR REMARK 3 S11: -0.0854 S12: 0.5184 S13: 0.3879 REMARK 3 S21: -0.5044 S22: -0.0926 S23: -0.3061 REMARK 3 S31: -0.2858 S32: 0.2102 S33: 0.0868 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0750 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10736 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.73100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2Q1M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20 MM HEPES, PH 7.5, 150 MM REMARK 280 NACL, 10% GLYCEROL, RESERVOIR (0.1M BIS-TRIS-HCL PH 5.5, 0.2M REMARK 280 SODIUM CHLORIDE, 25%(W/V) PEG3350), CRYOPROTECTION (RESERVOIR + REMARK 280 20% MPD), TEMPERATURE 298K, VAPOR DIFFUSION, SITTING DROP, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.36000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.36000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.36000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 72.36000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.36000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.36000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TRIMER GENERATED FROM THE REMARK 300 MONOMER IN THE ASYMMETRIC UNIT BY CRYSTALLOGRAPHIC SYMMETRY REMARK 300 OPERATIONS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -52.19400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -26.09700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -45.20133 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -52.19400 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -26.09700 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -45.20133 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 -26.09700 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 -45.20133 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -72.36000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 -52.19400 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 -72.36000 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 -72.36000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 231 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 264 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 THR A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 THR A 53 REMARK 465 ALA A 54 REMARK 465 TYR A 55 REMARK 465 LYS A 56 REMARK 465 GLY A 57 REMARK 465 VAL A 58 REMARK 465 ALA A 59 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 220 O HOH A 263 1.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 68 -120.95 52.78 REMARK 500 ASP A 102 114.74 -170.61 REMARK 500 ASP A 102 115.06 -170.61 REMARK 500 LEU A 121 58.91 -106.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-011107 RELATED DB: TARGETTRACK DBREF 4G4F A -1 124 PDB 4G4F 4G4F -1 124 SEQRES 1 A 126 GLY HIS THR ALA ASN LYS PRO CYS LEU ALA LYS PHE GLU SEQRES 2 A 126 LEU LEU THR SER LYS TRP GLN MET THR SER ARG LYS PRO SEQRES 3 A 126 PRO CYS VAL ASN SER LEU PRO GLU GLY LYS LEU LYS ILE SEQRES 4 A 126 LEU GLN ASP GLY LEU TYR LEU ILE TYR GLY GLN VAL ALA SEQRES 5 A 126 PRO SER THR ALA TYR LYS GLY VAL ALA PRO PHE ALA VAL SEQRES 6 A 126 GLN LEU ARG LYS ASN GLU ALA MET LEU GLN THR LEU THR SEQRES 7 A 126 SER ASN SER THR ILE TYR ASP VAL GLY GLY THR TYR GLU SEQRES 8 A 126 PHE HIS ALA GLY ASP ILE ILE ASP LEU ILE PHE ASP ASP SEQRES 9 A 126 GLU HIS GLN VAL LEU LYS ASN ASN THR TYR TRP GLY ILE SEQRES 10 A 126 VAL LEU LEU ALA ASN LEU PHE ILE SER FORMUL 2 HOH *73(H2 O) HELIX 1 1 ASP A 102 VAL A 106 5 5 HELIX 2 2 LEU A 107 ASN A 110 5 4 SHEET 1 A 5 LYS A 16 MET A 19 0 SHEET 2 A 5 LEU A 7 GLU A 11 -1 N LYS A 9 O GLN A 18 SHEET 3 A 5 TYR A 112 ASN A 120 -1 O TRP A 113 N PHE A 10 SHEET 4 A 5 GLY A 41 GLN A 48 -1 N LEU A 42 O ALA A 119 SHEET 5 A 5 GLY A 86 PHE A 90 -1 O GLY A 86 N ILE A 45 SHEET 1 B 5 VAL A 27 SER A 29 0 SHEET 2 B 5 LYS A 34 ILE A 37 -1 O LYS A 36 N ASN A 28 SHEET 3 B 5 ILE A 95 PHE A 100 -1 O ILE A 96 N LEU A 35 SHEET 4 B 5 PHE A 61 LYS A 67 -1 N ARG A 66 O ASP A 97 SHEET 5 B 5 ALA A 70 SER A 77 -1 O ALA A 70 N LYS A 67 SSBOND 1 CYS A 6 CYS A 26 1555 1555 2.03 CISPEP 1 LYS A 23 PRO A 24 0 -7.73 CRYST1 52.194 52.194 144.720 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019159 0.011062 0.000000 0.00000 SCALE2 0.000000 0.022123 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006910 0.00000