data_4G5I # _entry.id 4G5I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4G5I RCSB RCSB073763 WWPDB D_1000073763 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4G5I _pdbx_database_status.recvd_initial_deposition_date 2012-07-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Prasanth, G.K.' 1 'Naveen, C.D.' 2 'Mandal, P.K.' 3 'Karthe, P.' 4 'Haridas, M.' 5 'Sadasivan, C.' 6 # _citation.id primary _citation.title 'Crystal Structure of Porcine pancreatic PlA2 in complex with DBP' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Prasanth, G.K.' 1 primary 'Naveen, C.D.' 2 primary 'Mandal, P.K.' 3 primary 'Karthe, P.' 4 primary 'Haridas, M.' 5 primary 'Sadasivan, C.' 6 # _cell.entry_id 4G5I _cell.length_a 68.860 _cell.length_b 68.860 _cell.length_c 70.180 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4G5I _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Phospholipase A2, major isoenzyme' 14009.714 1 3.1.1.4 ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn 'dibutyl benzene-1,2-dicarboxylate' 278.343 1 ? ? ? ? 5 water nat water 18.015 83 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Group IB phospholipase A2, Phosphatidylcholine 2-acylhydrolase 1B' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNT EITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC ; _entity_poly.pdbx_seq_one_letter_code_can ;ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNT EITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LEU n 1 3 TRP n 1 4 GLN n 1 5 PHE n 1 6 ARG n 1 7 SER n 1 8 MET n 1 9 ILE n 1 10 LYS n 1 11 CYS n 1 12 ALA n 1 13 ILE n 1 14 PRO n 1 15 GLY n 1 16 SER n 1 17 HIS n 1 18 PRO n 1 19 LEU n 1 20 MET n 1 21 ASP n 1 22 PHE n 1 23 ASN n 1 24 ASN n 1 25 TYR n 1 26 GLY n 1 27 CYS n 1 28 TYR n 1 29 CYS n 1 30 GLY n 1 31 LEU n 1 32 GLY n 1 33 GLY n 1 34 SER n 1 35 GLY n 1 36 THR n 1 37 PRO n 1 38 VAL n 1 39 ASP n 1 40 GLU n 1 41 LEU n 1 42 ASP n 1 43 ARG n 1 44 CYS n 1 45 CYS n 1 46 GLU n 1 47 THR n 1 48 HIS n 1 49 ASP n 1 50 ASN n 1 51 CYS n 1 52 TYR n 1 53 ARG n 1 54 ASP n 1 55 ALA n 1 56 LYS n 1 57 ASN n 1 58 LEU n 1 59 ASP n 1 60 SER n 1 61 CYS n 1 62 LYS n 1 63 PHE n 1 64 LEU n 1 65 VAL n 1 66 ASP n 1 67 ASN n 1 68 PRO n 1 69 TYR n 1 70 THR n 1 71 GLU n 1 72 SER n 1 73 TYR n 1 74 SER n 1 75 TYR n 1 76 SER n 1 77 CYS n 1 78 SER n 1 79 ASN n 1 80 THR n 1 81 GLU n 1 82 ILE n 1 83 THR n 1 84 CYS n 1 85 ASN n 1 86 SER n 1 87 LYS n 1 88 ASN n 1 89 ASN n 1 90 ALA n 1 91 CYS n 1 92 GLU n 1 93 ALA n 1 94 PHE n 1 95 ILE n 1 96 CYS n 1 97 ASN n 1 98 CYS n 1 99 ASP n 1 100 ARG n 1 101 ASN n 1 102 ALA n 1 103 ALA n 1 104 ILE n 1 105 CYS n 1 106 PHE n 1 107 SER n 1 108 LYS n 1 109 ALA n 1 110 PRO n 1 111 TYR n 1 112 ASN n 1 113 LYS n 1 114 GLU n 1 115 HIS n 1 116 LYS n 1 117 ASN n 1 118 LEU n 1 119 ASP n 1 120 THR n 1 121 LYS n 1 122 LYS n 1 123 TYR n 1 124 CYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name pigs _entity_src_nat.pdbx_organism_scientific 'Sus scrofa' _entity_src_nat.pdbx_ncbi_taxonomy_id 9823 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PA21B_PIG _struct_ref.pdbx_db_accession P00592 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNT EITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC ; _struct_ref.pdbx_align_begin 23 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4G5I _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 124 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00592 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 146 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 124 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DB7 non-polymer . 'dibutyl benzene-1,2-dicarboxylate' 'Dibutyl phthalate' 'C16 H22 O4' 278.343 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4G5I _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.43 _exptl_crystal.density_percent_sol 64.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;0.05M Tris maleate buffer, 5mM Calcium chloride, 16% MPD, VAPOR DIFFUSION, HANGING DROP, temperature 290K , pH 7.2, temperature 298.15K ; # _diffrn.id 1 _diffrn.ambient_temp 200.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2009-03-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4G5I _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 29.82 _reflns.d_resolution_high 2.4 _reflns.number_obs 6808 _reflns.number_all ? _reflns.percent_possible_obs 92.49 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.46 _reflns_shell.percent_possible_all 92.49 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4G5I _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6808 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 9.94 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 92.49 _refine.ls_R_factor_obs 0.18511 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18241 _refine.ls_R_factor_R_free 0.24293 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 326 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.906 _refine.B_iso_mean 49.539 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.300 _refine.pdbx_overall_ESU_R_Free 0.242 _refine.overall_SU_ML 0.154 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 6.701 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 971 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 1078 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 9.94 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.022 ? 1020 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.984 1.961 ? 1380 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.093 5.000 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 40.961 25.000 ? 50 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.260 15.000 ? 163 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.902 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.124 0.200 ? 138 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 795 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.136 1.500 ? 619 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.177 2.000 ? 993 'X-RAY DIFFRACTION' ? r_scbond_it 3.203 3.000 ? 401 'X-RAY DIFFRACTION' ? r_scangle_it 5.259 4.500 ? 387 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.459 _refine_ls_shell.number_reflns_R_work 520 _refine_ls_shell.R_factor_R_work 0.222 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.331 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4G5I _struct.title 'Crystal Structure of Porcine pancreatic PlA2 in complex with DBP' _struct.pdbx_descriptor 'Phospholipase A2, major isoenzyme (E.C.3.1.1.4)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4G5I _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PHOSPHOLIPASE A2, DISULFIDE BOND, HYDROLASE, 2 LIPID DEGRADATION, LIPOPROTEIN, METAL-BINDING, PALMITATE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 1 ? ILE A 13 ? ALA A 1 ILE A 13 1 ? 13 HELX_P HELX_P2 2 HIS A 17 ? ASN A 23 ? HIS A 17 ASN A 23 1 ? 7 HELX_P HELX_P3 3 ASP A 39 ? ASN A 57 ? ASP A 39 ASN A 57 1 ? 19 HELX_P HELX_P4 4 PHE A 63 ? GLU A 71 ? PHE A 63 GLU A 71 5 ? 9 HELX_P HELX_P5 5 ASN A 89 ? ALA A 109 ? ASN A 89 ALA A 109 1 ? 21 HELX_P HELX_P6 6 ASN A 112 ? LYS A 116 ? ASN A 112 LYS A 116 5 ? 5 HELX_P HELX_P7 7 ASP A 119 ? CYS A 124 ? ASP A 119 CYS A 124 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 77 SG ? ? A CYS 11 A CYS 77 1_555 ? ? ? ? ? ? ? 2.073 ? disulf2 disulf ? ? A CYS 27 SG ? ? ? 1_555 A CYS 124 SG ? ? A CYS 27 A CYS 124 1_555 ? ? ? ? ? ? ? 2.013 ? disulf3 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 45 SG ? ? A CYS 29 A CYS 45 1_555 ? ? ? ? ? ? ? 1.997 ? disulf4 disulf ? ? A CYS 44 SG ? ? ? 1_555 A CYS 105 SG ? ? A CYS 44 A CYS 105 1_555 ? ? ? ? ? ? ? 1.973 ? disulf5 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 98 SG ? ? A CYS 51 A CYS 98 1_555 ? ? ? ? ? ? ? 2.047 ? disulf6 disulf ? ? A CYS 61 SG ? ? ? 1_555 A CYS 91 SG ? ? A CYS 61 A CYS 91 1_555 ? ? ? ? ? ? ? 1.995 ? disulf7 disulf ? ? A CYS 84 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 84 A CYS 96 1_555 ? ? ? ? ? ? ? 2.021 ? metalc1 metalc ? ? A TYR 28 O ? ? ? 1_555 B CA . CA ? ? A TYR 28 A CA 201 1_555 ? ? ? ? ? ? ? 2.265 ? metalc2 metalc ? ? A GLY 30 O ? ? ? 1_555 B CA . CA ? ? A GLY 30 A CA 201 1_555 ? ? ? ? ? ? ? 2.273 ? metalc3 metalc ? ? A ASP 49 OD1 ? ? ? 1_555 B CA . CA ? ? A ASP 49 A CA 201 1_555 ? ? ? ? ? ? ? 2.311 ? metalc4 metalc ? ? A GLU 92 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 92 A CA 202 1_555 ? ? ? ? ? ? ? 2.335 ? metalc5 metalc ? ? A ASP 49 OD2 ? ? ? 1_555 B CA . CA ? ? A ASP 49 A CA 201 1_555 ? ? ? ? ? ? ? 2.337 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 201 A HOH 301 1_555 ? ? ? ? ? ? ? 2.388 ? metalc7 metalc ? ? A GLY 32 O ? ? ? 1_555 B CA . CA ? ? A GLY 32 A CA 201 1_555 ? ? ? ? ? ? ? 2.464 ? metalc8 metalc ? ? A GLU 71 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 71 A CA 202 1_555 ? ? ? ? ? ? ? 2.545 ? metalc9 metalc ? ? B CA . CA ? ? ? 1_555 G HOH . O ? ? A CA 201 A HOH 335 1_555 ? ? ? ? ? ? ? 2.554 ? metalc10 metalc ? ? A SER 72 O ? ? ? 1_555 C CA . CA ? ? A SER 72 A CA 202 1_555 ? ? ? ? ? ? ? 2.638 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 75 ? SER A 78 ? TYR A 75 SER A 78 A 2 GLU A 81 ? CYS A 84 ? GLU A 81 CYS A 84 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 76 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 76 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id THR _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 83 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id THR _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 83 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 201' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A 202' AC3 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CA A 203' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CL A 204' AC5 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE DB7 A 205' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 TYR A 28 ? TYR A 28 . ? 1_555 ? 2 AC1 6 GLY A 30 ? GLY A 30 . ? 1_555 ? 3 AC1 6 GLY A 32 ? GLY A 32 . ? 1_555 ? 4 AC1 6 ASP A 49 ? ASP A 49 . ? 1_555 ? 5 AC1 6 HOH G . ? HOH A 301 . ? 1_555 ? 6 AC1 6 HOH G . ? HOH A 335 . ? 1_555 ? 7 AC2 6 GLU A 71 ? GLU A 71 . ? 1_555 ? 8 AC2 6 GLU A 71 ? GLU A 71 . ? 5_555 ? 9 AC2 6 SER A 72 ? SER A 72 . ? 5_555 ? 10 AC2 6 SER A 72 ? SER A 72 . ? 1_555 ? 11 AC2 6 GLU A 92 ? GLU A 92 . ? 1_555 ? 12 AC2 6 GLU A 92 ? GLU A 92 . ? 5_555 ? 13 AC3 1 CL E . ? CL A 204 . ? 1_555 ? 14 AC4 1 CA D . ? CA A 203 . ? 1_555 ? 15 AC5 8 GLY A 30 ? GLY A 30 . ? 1_555 ? 16 AC5 8 LEU A 31 ? LEU A 31 . ? 1_555 ? 17 AC5 8 GLY A 32 ? GLY A 32 . ? 1_555 ? 18 AC5 8 VAL A 38 ? VAL A 38 . ? 2_545 ? 19 AC5 8 ASN A 67 ? ASN A 67 . ? 1_555 ? 20 AC5 8 TYR A 69 ? TYR A 69 . ? 1_555 ? 21 AC5 8 HOH G . ? HOH A 301 . ? 1_555 ? 22 AC5 8 HOH G . ? HOH A 381 . ? 1_555 ? # _database_PDB_matrix.entry_id 4G5I _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4G5I _atom_sites.fract_transf_matrix[1][1] 0.014522 _atom_sites.fract_transf_matrix[1][2] 0.008384 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016769 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014249 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 TRP 3 3 3 TRP TRP A . n A 1 4 GLN 4 4 4 GLN GLN A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 CYS 29 29 29 CYS CYS A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 CYS 61 61 61 CYS CYS A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 TYR 75 75 75 TYR TYR A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 CYS 84 84 84 CYS CYS A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 CYS 91 91 91 CYS CYS A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 PHE 94 94 94 PHE PHE A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 CYS 96 96 96 CYS CYS A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 CYS 98 98 98 CYS CYS A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 ARG 100 100 100 ARG ARG A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 CYS 105 105 105 CYS CYS A . n A 1 106 PHE 106 106 106 PHE PHE A . n A 1 107 SER 107 107 107 SER SER A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 HIS 115 115 115 HIS HIS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 LYS 122 122 122 LYS LYS A . n A 1 123 TYR 123 123 123 TYR TYR A . n A 1 124 CYS 124 124 124 CYS CYS A . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G 2 1,2 A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 2350 ? 2 MORE -125 ? 2 'SSA (A^2)' 12750 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 46.7866666667 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A TYR 28 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 30 ? A GLY 30 ? 1_555 92.1 ? 2 O ? A TYR 28 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 97.7 ? 3 O ? A GLY 30 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 158.4 ? 4 O ? A TYR 28 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 106.7 ? 5 O ? A GLY 30 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 139.0 ? 6 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 55.6 ? 7 O ? A TYR 28 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 173.9 ? 8 O ? A GLY 30 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 81.9 ? 9 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 88.2 ? 10 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 301 ? 1_555 77.9 ? 11 O ? A TYR 28 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 32 ? A GLY 32 ? 1_555 88.0 ? 12 O ? A GLY 30 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 32 ? A GLY 32 ? 1_555 78.6 ? 13 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 32 ? A GLY 32 ? 1_555 82.5 ? 14 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 32 ? A GLY 32 ? 1_555 136.5 ? 15 O ? G HOH . ? A HOH 301 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? A GLY 32 ? A GLY 32 ? 1_555 91.2 ? 16 O ? A TYR 28 ? A TYR 28 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 335 ? 1_555 78.9 ? 17 O ? A GLY 30 ? A GLY 30 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 335 ? 1_555 71.6 ? 18 OD1 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 335 ? 1_555 129.2 ? 19 OD2 ? A ASP 49 ? A ASP 49 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 335 ? 1_555 76.7 ? 20 O ? G HOH . ? A HOH 301 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 335 ? 1_555 98.7 ? 21 O ? A GLY 32 ? A GLY 32 ? 1_555 CA ? B CA . ? A CA 201 ? 1_555 O ? G HOH . ? A HOH 335 ? 1_555 146.8 ? 22 OE2 ? A GLU 92 ? A GLU 92 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 OE1 ? A GLU 71 ? A GLU 71 ? 1_555 94.7 ? 23 OE2 ? A GLU 92 ? A GLU 92 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? A SER 72 ? A SER 72 ? 1_555 79.7 ? 24 OE1 ? A GLU 71 ? A GLU 71 ? 1_555 CA ? C CA . ? A CA 202 ? 1_555 O ? A SER 72 ? A SER 72 ? 1_555 83.3 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-11-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 33.3384 _pdbx_refine_tls.origin_y -14.3396 _pdbx_refine_tls.origin_z 14.1777 _pdbx_refine_tls.T[1][1] 0.0602 _pdbx_refine_tls.T[2][2] 0.1356 _pdbx_refine_tls.T[3][3] 0.0667 _pdbx_refine_tls.T[1][2] 0.0586 _pdbx_refine_tls.T[1][3] 0.0180 _pdbx_refine_tls.T[2][3] 0.0148 _pdbx_refine_tls.L[1][1] 0.7757 _pdbx_refine_tls.L[2][2] 9.2526 _pdbx_refine_tls.L[3][3] 3.0232 _pdbx_refine_tls.L[1][2] -1.3383 _pdbx_refine_tls.L[1][3] -0.7365 _pdbx_refine_tls.L[2][3] 2.9899 _pdbx_refine_tls.S[1][1] 0.0196 _pdbx_refine_tls.S[1][2] 0.0416 _pdbx_refine_tls.S[1][3] -0.2095 _pdbx_refine_tls.S[2][1] -0.0736 _pdbx_refine_tls.S[2][2] -0.2957 _pdbx_refine_tls.S[2][3] 0.3233 _pdbx_refine_tls.S[3][1] 0.1818 _pdbx_refine_tls.S[3][2] -0.1488 _pdbx_refine_tls.S[3][3] 0.2761 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 124 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345dtb 'data collection' . ? 1 AMoRE phasing . ? 2 REFMAC refinement 5.5.0110 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 N _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 80 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 373 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id THR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 80 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 77.59 _pdbx_validate_torsion.psi -12.89 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 'CHLORIDE ION' CL 4 'dibutyl benzene-1,2-dicarboxylate' DB7 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 201 1 CA CA A . C 2 CA 1 202 1 CA CA A . D 2 CA 1 203 1 CA CA A . E 3 CL 1 204 1 CL CL A . F 4 DB7 1 205 1 DB7 MOL A . G 5 HOH 1 301 1 HOH HOH A . G 5 HOH 2 302 2 HOH HOH A . G 5 HOH 3 303 3 HOH HOH A . G 5 HOH 4 304 4 HOH HOH A . G 5 HOH 5 305 5 HOH HOH A . G 5 HOH 6 306 6 HOH HOH A . G 5 HOH 7 307 7 HOH HOH A . G 5 HOH 8 308 8 HOH HOH A . G 5 HOH 9 309 9 HOH HOH A . G 5 HOH 10 310 10 HOH HOH A . G 5 HOH 11 311 11 HOH HOH A . G 5 HOH 12 312 12 HOH HOH A . G 5 HOH 13 313 13 HOH HOH A . G 5 HOH 14 314 14 HOH HOH A . G 5 HOH 15 315 15 HOH HOH A . G 5 HOH 16 316 16 HOH HOH A . G 5 HOH 17 317 17 HOH HOH A . G 5 HOH 18 318 18 HOH HOH A . G 5 HOH 19 319 19 HOH HOH A . G 5 HOH 20 320 20 HOH HOH A . G 5 HOH 21 321 21 HOH HOH A . G 5 HOH 22 322 22 HOH HOH A . G 5 HOH 23 323 23 HOH HOH A . G 5 HOH 24 324 24 HOH HOH A . G 5 HOH 25 325 25 HOH HOH A . G 5 HOH 26 326 26 HOH HOH A . G 5 HOH 27 327 27 HOH HOH A . G 5 HOH 28 328 28 HOH HOH A . G 5 HOH 29 329 29 HOH HOH A . G 5 HOH 30 330 30 HOH HOH A . G 5 HOH 31 331 31 HOH HOH A . G 5 HOH 32 332 32 HOH HOH A . G 5 HOH 33 333 33 HOH HOH A . G 5 HOH 34 334 34 HOH HOH A . G 5 HOH 35 335 35 HOH HOH A . G 5 HOH 36 336 36 HOH HOH A . G 5 HOH 37 337 37 HOH HOH A . G 5 HOH 38 338 38 HOH HOH A . G 5 HOH 39 339 39 HOH HOH A . G 5 HOH 40 340 40 HOH HOH A . G 5 HOH 41 341 41 HOH HOH A . G 5 HOH 42 342 42 HOH HOH A . G 5 HOH 43 343 43 HOH HOH A . G 5 HOH 44 344 44 HOH HOH A . G 5 HOH 45 345 45 HOH HOH A . G 5 HOH 46 346 46 HOH HOH A . G 5 HOH 47 347 47 HOH HOH A . G 5 HOH 48 348 48 HOH HOH A . G 5 HOH 49 349 49 HOH HOH A . G 5 HOH 50 350 50 HOH HOH A . G 5 HOH 51 351 51 HOH HOH A . G 5 HOH 52 352 52 HOH HOH A . G 5 HOH 53 353 53 HOH HOH A . G 5 HOH 54 354 54 HOH HOH A . G 5 HOH 55 355 55 HOH HOH A . G 5 HOH 56 356 56 HOH HOH A . G 5 HOH 57 357 57 HOH HOH A . G 5 HOH 58 358 58 HOH HOH A . G 5 HOH 59 359 59 HOH HOH A . G 5 HOH 60 360 60 HOH HOH A . G 5 HOH 61 361 61 HOH HOH A . G 5 HOH 62 362 62 HOH HOH A . G 5 HOH 63 363 63 HOH HOH A . G 5 HOH 64 364 64 HOH HOH A . G 5 HOH 65 365 65 HOH HOH A . G 5 HOH 66 366 66 HOH HOH A . G 5 HOH 67 367 67 HOH HOH A . G 5 HOH 68 368 68 HOH HOH A . G 5 HOH 69 369 69 HOH HOH A . G 5 HOH 70 370 70 HOH HOH A . G 5 HOH 71 371 71 HOH HOH A . G 5 HOH 72 372 72 HOH HOH A . G 5 HOH 73 373 73 HOH HOH A . G 5 HOH 74 374 74 HOH HOH A . G 5 HOH 75 375 75 HOH HOH A . G 5 HOH 76 376 76 HOH HOH A . G 5 HOH 77 377 77 HOH HOH A . G 5 HOH 78 378 78 HOH HOH A . G 5 HOH 79 379 79 HOH HOH A . G 5 HOH 80 380 80 HOH HOH A . G 5 HOH 81 381 81 HOH HOH A . G 5 HOH 82 382 82 HOH HOH A . G 5 HOH 83 383 83 HOH HOH A . #