HEADER TRANSFERASE/TRANSFERASE INHIBITOR 18-JUL-12 4G5P TITLE CRYSTAL STRUCTURE OF EGFR KINASE T790M IN COMPLEX WITH BIBW2992 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: KINASE DOMAIN, UNP RESIDUES 696-1022; COMPND 5 SYNONYM: PROTO-ONCOGENE C-ERBB-1, RECEPTOR TYROSINE-PROTEIN KINASE COMPND 6 ERBB-1; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS EGF RECEPTOR KINASE MUTANT T790M, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.SOLCA,G.DAHL,A.ZOEPHEL,G.BADER,M.SANDERSON,C.KLEIN,O.KRAEMER, AUTHOR 2 F.HIMMELSBACH,E.HAAKSMA,G.R.ADOLF REVDAT 2 31-OCT-12 4G5P 1 JRNL REVDAT 1 29-AUG-12 4G5P 0 JRNL AUTH F.SOLCA,G.DAHL,A.ZOEPHEL,G.BADER,M.SANDERSON,C.KLEIN, JRNL AUTH 2 O.KRAEMER,F.HIMMELSBACH,E.HAAKSMA,G.R.ADOLF JRNL TITL TARGET BINDING PROPERTIES AND CELLULAR ACTIVITY OF AFATINIB JRNL TITL 2 (BIBW 2992), AN IRREVERSIBLE ERBB FAMILY BLOCKER. JRNL REF J.PHARMACOL.EXP.THER. V. 343 342 2012 JRNL REFN ISSN 0022-3565 JRNL PMID 22888144 JRNL DOI 10.1124/JPET.112.197756 REMARK 2 REMARK 2 RESOLUTION. 3.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 88.6 REMARK 3 NUMBER OF REFLECTIONS : 11432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.323 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.000 REMARK 3 FREE R VALUE TEST SET COUNT : 472 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.17 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 748 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE SET COUNT : 28 REMARK 3 BIN FREE R VALUE : 0.3980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4830 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 38 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.04000 REMARK 3 B22 (A**2) : -1.20000 REMARK 3 B33 (A**2) : -2.84000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.707 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.568 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 35.154 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.858 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.733 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4969 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4643 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6719 ; 1.065 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10814 ; 0.718 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 594 ; 6.550 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 211 ;33.618 ;24.028 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 915 ;15.659 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;13.601 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 750 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5338 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 955 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1314 ; 0.226 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5161 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2390 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2905 ; 0.081 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 142 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.040 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.121 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 57 ; 0.178 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.010 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3903 ; 1.434 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1211 ; 0.187 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4863 ; 1.792 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2361 ; 2.363 ; 4.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1856 ; 3.528 ; 6.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4G5P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUL-12. REMARK 100 THE RCSB ID CODE IS RCSB073770. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11931 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.170 REMARK 200 RESOLUTION RANGE LOW (A) : 82.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13000 REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.35500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.61500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.34000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.71500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.34000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.61500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.71500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 693 REMARK 465 SER A 694 REMARK 465 MET A 695 REMARK 465 MET A 987 REMARK 465 HIS A 988 REMARK 465 LEU A 989 REMARK 465 PRO A 990 REMARK 465 SER A 991 REMARK 465 PRO A 992 REMARK 465 THR A 993 REMARK 465 ASP A 994 REMARK 465 SER A 995 REMARK 465 ASN A 996 REMARK 465 PHE A 997 REMARK 465 TYR A 998 REMARK 465 ARG A 999 REMARK 465 ALA A 1000 REMARK 465 LEU A 1001 REMARK 465 MET A 1002 REMARK 465 ASP A 1003 REMARK 465 GLU A 1004 REMARK 465 GLU A 1005 REMARK 465 ASP A 1006 REMARK 465 MET A 1007 REMARK 465 ASP A 1008 REMARK 465 LEU A 1017 REMARK 465 ILE A 1018 REMARK 465 PRO A 1019 REMARK 465 GLN A 1020 REMARK 465 GLN A 1021 REMARK 465 GLY A 1022 REMARK 465 GLY B 693 REMARK 465 SER B 694 REMARK 465 MET B 695 REMARK 465 GLY B 696 REMARK 465 LEU B 862 REMARK 465 GLY B 863 REMARK 465 ALA B 864 REMARK 465 GLU B 865 REMARK 465 GLU B 866 REMARK 465 GLU B 872 REMARK 465 GLY B 873 REMARK 465 GLY B 874 REMARK 465 ARG B 986 REMARK 465 MET B 987 REMARK 465 HIS B 988 REMARK 465 SER B 991 REMARK 465 PRO B 992 REMARK 465 GLU B 1004 REMARK 465 GLU B 1005 REMARK 465 ASP B 1006 REMARK 465 MET B 1007 REMARK 465 ASP B 1008 REMARK 465 ASP B 1009 REMARK 465 PRO B 1019 REMARK 465 GLN B 1020 REMARK 465 GLN B 1021 REMARK 465 GLY B 1022 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 697 CG CD OE1 OE2 REMARK 480 LYS A 737 CG CD CE NZ REMARK 480 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 480 SER A 752 OG REMARK 480 LYS A 754 CG CD CE NZ REMARK 480 ILE A 759 CD1 REMARK 480 LEU A 782 CD1 CD2 REMARK 480 ARG A 831 NE CZ NH1 NH2 REMARK 480 VAL A 1011 CG1 CG2 REMARK 480 LYS B 867 CD CE NZ REMARK 480 LYS B 875 CG CD CE NZ REMARK 480 LEU B 1001 CG CD1 CD2 REMARK 480 ASP B 1003 CG OD1 OD2 REMARK 480 ILE B 1018 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 701 12.81 55.29 REMARK 500 LYS A 728 -87.52 -83.86 REMARK 500 PRO A 733 137.46 -39.76 REMARK 500 PRO A 772 -36.11 -39.93 REMARK 500 GLU A 804 -73.24 -80.46 REMARK 500 ARG A 832 10.09 55.95 REMARK 500 ASP A 837 59.79 -152.87 REMARK 500 ALA A 839 143.96 156.37 REMARK 500 ARG A 841 -70.75 -16.70 REMARK 500 PRO A 848 -22.67 -38.39 REMARK 500 HIS A 850 124.32 -173.84 REMARK 500 ASP A 855 83.84 77.97 REMARK 500 LYS A 879 45.37 -75.71 REMARK 500 TRP A 880 -52.64 -155.57 REMARK 500 TRP A 898 -59.64 -25.18 REMARK 500 PHE A 910 35.58 80.74 REMARK 500 SER A 912 125.65 10.22 REMARK 500 GLU A 922 12.78 -142.28 REMARK 500 GLN A 982 133.87 -37.08 REMARK 500 GLU A 985 44.32 -91.94 REMARK 500 ALA A1013 -24.12 100.18 REMARK 500 GLU A1015 57.82 -158.27 REMARK 500 ALA B 750 -6.27 75.77 REMARK 500 ASP B 770 81.84 -156.64 REMARK 500 VAL B 786 116.78 -37.97 REMARK 500 LYS B 806 -46.52 -22.96 REMARK 500 ARG B 831 40.41 -96.25 REMARK 500 ARG B 836 -67.24 75.01 REMARK 500 ASP B 837 66.84 -103.01 REMARK 500 PRO B 848 -14.84 -43.20 REMARK 500 HIS B 888 24.27 -149.40 REMARK 500 ARG B 889 43.64 34.32 REMARK 500 TRP B 951 34.59 -99.03 REMARK 500 ASP B 984 50.67 -159.36 REMARK 500 MET B1002 -69.84 -105.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1113 DISTANCE = 5.21 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 0WN A 1101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4G5J RELATED DB: PDB DBREF 4G5P A 696 1022 UNP P00533 EGFR_HUMAN 696 1022 DBREF 4G5P B 696 1022 UNP P00533 EGFR_HUMAN 696 1022 SEQADV 4G5P GLY A 693 UNP P00533 EXPRESSION TAG SEQADV 4G5P SER A 694 UNP P00533 EXPRESSION TAG SEQADV 4G5P MET A 695 UNP P00533 EXPRESSION TAG SEQADV 4G5P MET A 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQADV 4G5P GLY B 693 UNP P00533 EXPRESSION TAG SEQADV 4G5P SER B 694 UNP P00533 EXPRESSION TAG SEQADV 4G5P MET B 695 UNP P00533 EXPRESSION TAG SEQADV 4G5P MET B 790 UNP P00533 THR 790 ENGINEERED MUTATION SEQRES 1 A 330 GLY SER MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG SEQRES 2 A 330 ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU SEQRES 3 A 330 GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP SEQRES 4 A 330 ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE SEQRES 5 A 330 LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS SEQRES 6 A 330 GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP SEQRES 7 A 330 ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SEQRES 8 A 330 SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE GLY SEQRES 9 A 330 CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE SEQRES 10 A 330 GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA SEQRES 11 A 330 LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS SEQRES 12 A 330 ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO SEQRES 13 A 330 GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS LEU SEQRES 14 A 330 LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY SEQRES 15 A 330 LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU SEQRES 16 A 330 HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 17 A 330 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS SEQRES 18 A 330 PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE SEQRES 19 A 330 LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS SEQRES 20 A 330 THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET SEQRES 21 A 330 ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE SEQRES 22 A 330 ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR SEQRES 23 A 330 LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER SEQRES 24 A 330 PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU SEQRES 25 A 330 GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU SEQRES 26 A 330 ILE PRO GLN GLN GLY SEQRES 1 B 330 GLY SER MET GLY GLU ALA PRO ASN GLN ALA LEU LEU ARG SEQRES 2 B 330 ILE LEU LYS GLU THR GLU PHE LYS LYS ILE LYS VAL LEU SEQRES 3 B 330 GLY SER GLY ALA PHE GLY THR VAL TYR LYS GLY LEU TRP SEQRES 4 B 330 ILE PRO GLU GLY GLU LYS VAL LYS ILE PRO VAL ALA ILE SEQRES 5 B 330 LYS GLU LEU ARG GLU ALA THR SER PRO LYS ALA ASN LYS SEQRES 6 B 330 GLU ILE LEU ASP GLU ALA TYR VAL MET ALA SER VAL ASP SEQRES 7 B 330 ASN PRO HIS VAL CYS ARG LEU LEU GLY ILE CYS LEU THR SEQRES 8 B 330 SER THR VAL GLN LEU ILE MET GLN LEU MET PRO PHE GLY SEQRES 9 B 330 CYS LEU LEU ASP TYR VAL ARG GLU HIS LYS ASP ASN ILE SEQRES 10 B 330 GLY SER GLN TYR LEU LEU ASN TRP CYS VAL GLN ILE ALA SEQRES 11 B 330 LYS GLY MET ASN TYR LEU GLU ASP ARG ARG LEU VAL HIS SEQRES 12 B 330 ARG ASP LEU ALA ALA ARG ASN VAL LEU VAL LYS THR PRO SEQRES 13 B 330 GLN HIS VAL LYS ILE THR ASP PHE GLY LEU ALA LYS LEU SEQRES 14 B 330 LEU GLY ALA GLU GLU LYS GLU TYR HIS ALA GLU GLY GLY SEQRES 15 B 330 LYS VAL PRO ILE LYS TRP MET ALA LEU GLU SER ILE LEU SEQRES 16 B 330 HIS ARG ILE TYR THR HIS GLN SER ASP VAL TRP SER TYR SEQRES 17 B 330 GLY VAL THR VAL TRP GLU LEU MET THR PHE GLY SER LYS SEQRES 18 B 330 PRO TYR ASP GLY ILE PRO ALA SER GLU ILE SER SER ILE SEQRES 19 B 330 LEU GLU LYS GLY GLU ARG LEU PRO GLN PRO PRO ILE CYS SEQRES 20 B 330 THR ILE ASP VAL TYR MET ILE MET VAL LYS CYS TRP MET SEQRES 21 B 330 ILE ASP ALA ASP SER ARG PRO LYS PHE ARG GLU LEU ILE SEQRES 22 B 330 ILE GLU PHE SER LYS MET ALA ARG ASP PRO GLN ARG TYR SEQRES 23 B 330 LEU VAL ILE GLN GLY ASP GLU ARG MET HIS LEU PRO SER SEQRES 24 B 330 PRO THR ASP SER ASN PHE TYR ARG ALA LEU MET ASP GLU SEQRES 25 B 330 GLU ASP MET ASP ASP VAL VAL ASP ALA ASP GLU TYR LEU SEQRES 26 B 330 ILE PRO GLN GLN GLY HET 0WN A1101 34 HETNAM 0WN N-{4-[(3-CHLORO-4-FLUOROPHENYL)AMINO]-7-[(3S)- HETNAM 2 0WN TETRAHYDROFURAN-3-YLOXY]QUINAZOLIN-6-YL}-4- HETNAM 3 0WN (DIMETHYLAMINO)BUTANAMIDE HETSYN 0WN AFATINIB, BOUND FORM FORMUL 3 0WN C24 H27 CL F N5 O3 FORMUL 4 HOH *38(H2 O) HELIX 1 1 SER A 752 VAL A 769 1 18 HELIX 2 2 LEU A 798 LYS A 806 1 9 HELIX 3 3 GLY A 810 ARG A 831 1 22 HELIX 4 4 ALA A 839 ARG A 841 5 3 HELIX 5 5 ALA A 882 HIS A 888 1 7 HELIX 6 6 THR A 892 PHE A 910 1 19 HELIX 7 7 PRO A 919 SER A 921 5 3 HELIX 8 8 GLU A 922 GLY A 930 1 9 HELIX 9 9 THR A 940 CYS A 950 1 11 HELIX 10 10 LYS A 960 ASP A 974 1 15 HELIX 11 11 PRO A 975 TYR A 978 5 4 HELIX 12 12 LYS B 708 THR B 710 5 3 HELIX 13 13 SER B 752 VAL B 769 1 18 HELIX 14 14 CYS B 797 HIS B 805 1 9 HELIX 15 15 LYS B 806 ILE B 809 5 4 HELIX 16 16 GLY B 810 ARG B 831 1 22 HELIX 17 17 ALA B 839 ARG B 841 5 3 HELIX 18 18 PRO B 877 ALA B 882 5 6 HELIX 19 19 LEU B 883 HIS B 888 1 6 HELIX 20 20 THR B 892 THR B 909 1 18 HELIX 21 21 PRO B 919 GLY B 930 1 12 HELIX 22 22 THR B 940 TRP B 951 1 12 HELIX 23 23 LYS B 960 ASP B 974 1 15 HELIX 24 24 ASP B 974 LEU B 979 1 6 HELIX 25 25 SER B 995 ASP B 1003 1 9 SHEET 1 A 5 PHE A 712 LYS A 713 0 SHEET 2 A 5 LEU A 730 TRP A 731 -1 O LEU A 730 N LYS A 713 SHEET 3 A 5 ILE A 740 LEU A 747 -1 O ILE A 740 N TRP A 731 SHEET 4 A 5 GLY A 724 TYR A 727 -1 N TYR A 727 O ILE A 744 SHEET 5 A 5 VAL A 717 SER A 720 -1 N GLY A 719 O VAL A 726 SHEET 1 B 5 PHE A 712 LYS A 713 0 SHEET 2 B 5 LEU A 730 TRP A 731 -1 O LEU A 730 N LYS A 713 SHEET 3 B 5 ILE A 740 LEU A 747 -1 O ILE A 740 N TRP A 731 SHEET 4 B 5 GLN A 787 GLN A 791 -1 O MET A 790 N ALA A 743 SHEET 5 B 5 LEU A 777 CYS A 781 -1 N CYS A 781 O GLN A 787 SHEET 1 C 3 GLY A 796 CYS A 797 0 SHEET 2 C 3 VAL A 843 THR A 847 -1 O VAL A 845 N GLY A 796 SHEET 3 C 3 HIS A 850 ILE A 853 -1 O LYS A 852 N LEU A 844 SHEET 1 D 2 LEU A 833 VAL A 834 0 SHEET 2 D 2 LYS A 860 LEU A 861 -1 O LYS A 860 N VAL A 834 SHEET 1 E 2 TYR A 869 HIS A 870 0 SHEET 2 E 2 ILE A 890 TYR A 891 -1 O TYR A 891 N TYR A 869 SHEET 1 F 5 PHE B 712 SER B 720 0 SHEET 2 F 5 THR B 725 TRP B 731 -1 O LYS B 728 N LYS B 716 SHEET 3 F 5 ILE B 740 GLU B 746 -1 O ILE B 740 N TRP B 731 SHEET 4 F 5 GLN B 787 GLN B 791 -1 O MET B 790 N ALA B 743 SHEET 5 F 5 LEU B 777 CYS B 781 -1 N GLY B 779 O ILE B 789 SHEET 1 G 2 VAL B 843 THR B 847 0 SHEET 2 G 2 HIS B 850 ILE B 853 -1 O LYS B 852 N LEU B 844 SHEET 1 H 2 TYR B 869 HIS B 870 0 SHEET 2 H 2 ILE B 890 TYR B 891 -1 O TYR B 891 N TYR B 869 LINK SG CYS A 797 C30 0WN A1101 1555 1555 1.83 SITE 1 AC1 14 LEU A 718 ALA A 743 LYS A 745 GLU A 762 SITE 2 AC1 14 MET A 790 GLN A 791 LEU A 792 MET A 793 SITE 3 AC1 14 PRO A 794 GLY A 796 CYS A 797 ASP A 800 SITE 4 AC1 14 LEU A 844 ASP A 855 CRYST1 51.230 89.430 164.680 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019520 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011182 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006072 0.00000