HEADER LYASE 20-JUL-12 4G7F TITLE CRYSTAL STRUCTURE OF ENOLASE FROM TRYPANOSOMA CRUZI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOLASE; COMPND 3 CHAIN: A; COMPND 4 EC: 4.2.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; SOURCE 3 ORGANISM_TAXID: 353153; SOURCE 4 STRAIN: CL BRENER; SOURCE 5 GENE: TC00.1047053504105.140; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BG1861; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: TRCRA.01024.A.B1 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, ENOLASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.K.CRAIG,T.E.EDWARDS,B.STAKER,SEATTLE STRUCTURAL GENOMICS CENTER FOR AUTHOR 2 INFECTIOUS DISEASE (SSGCID) REVDAT 2 13-SEP-23 4G7F 1 REMARK LINK REVDAT 1 29-AUG-12 4G7F 0 JRNL AUTH T.K.CRAIG,T.E.EDWARDS,B.STAKER, JRNL AUTH 2 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE JRNL AUTH 3 (SSGCID) JRNL TITL CRYSTAL STRUCTURE OF ENOLASE FROM TRYPANOSOMA CRUZI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 19774 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8099 - 4.5749 1.00 2803 145 0.1753 0.2390 REMARK 3 2 4.5749 - 3.6386 1.00 2707 140 0.1639 0.2284 REMARK 3 3 3.6386 - 3.1808 1.00 2655 141 0.2001 0.2592 REMARK 3 4 3.1808 - 2.8909 1.00 2669 151 0.2116 0.2467 REMARK 3 5 2.8909 - 2.6842 1.00 2653 134 0.2164 0.2719 REMARK 3 6 2.6842 - 2.5263 1.00 2631 139 0.2184 0.2879 REMARK 3 7 2.5263 - 2.4000 1.00 2663 143 0.2181 0.3025 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3058 REMARK 3 ANGLE : 1.467 4159 REMARK 3 CHIRALITY : 0.078 483 REMARK 3 PLANARITY : 0.007 554 REMARK 3 DIHEDRAL : 14.381 1065 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.4471 -8.4895 -14.8700 REMARK 3 T TENSOR REMARK 3 T11: 0.1586 T22: 0.2099 REMARK 3 T33: 0.1359 T12: 0.0300 REMARK 3 T13: 0.0406 T23: 0.0362 REMARK 3 L TENSOR REMARK 3 L11: 3.1190 L22: 5.5047 REMARK 3 L33: 3.8459 L12: 1.4273 REMARK 3 L13: 0.8740 L23: 2.4786 REMARK 3 S TENSOR REMARK 3 S11: -0.2611 S12: 0.0335 S13: 0.1571 REMARK 3 S21: 0.1043 S22: 0.2346 S23: 0.3514 REMARK 3 S31: 0.0371 S32: -0.2869 S33: -0.0308 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.5969 -10.4902 -9.1192 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.2398 REMARK 3 T33: 0.1275 T12: -0.0175 REMARK 3 T13: 0.0016 T23: -0.0037 REMARK 3 L TENSOR REMARK 3 L11: 2.9645 L22: 2.7896 REMARK 3 L33: 3.7099 L12: 0.5629 REMARK 3 L13: -0.1513 L23: 0.0481 REMARK 3 S TENSOR REMARK 3 S11: -0.0781 S12: -0.2643 S13: -0.1453 REMARK 3 S21: 0.2212 S22: -0.0439 S23: -0.0861 REMARK 3 S31: 0.2949 S32: 0.0285 S33: 0.0986 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.1884 -5.6045 -8.9338 REMARK 3 T TENSOR REMARK 3 T11: 0.1407 T22: 0.2220 REMARK 3 T33: 0.1830 T12: 0.0148 REMARK 3 T13: 0.0308 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 2.1014 L22: 2.7548 REMARK 3 L33: 7.4325 L12: 0.1766 REMARK 3 L13: -0.0952 L23: -1.0229 REMARK 3 S TENSOR REMARK 3 S11: -0.0301 S12: -0.1846 S13: 0.0417 REMARK 3 S21: 0.2197 S22: -0.0040 S23: 0.1068 REMARK 3 S31: 0.2209 S32: 0.6349 S33: 0.0995 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6382 -10.2844 -27.7349 REMARK 3 T TENSOR REMARK 3 T11: 0.2737 T22: 0.4633 REMARK 3 T33: 0.2093 T12: 0.0740 REMARK 3 T13: 0.0144 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 1.1940 L22: 4.9595 REMARK 3 L33: 2.1070 L12: -1.4454 REMARK 3 L13: 0.0558 L23: 2.4532 REMARK 3 S TENSOR REMARK 3 S11: 0.2601 S12: 0.2910 S13: 0.0832 REMARK 3 S21: -0.0213 S22: -0.1880 S23: -0.2684 REMARK 3 S31: 0.2213 S32: 0.6762 S33: 0.0267 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.6338 -33.3115 -32.4780 REMARK 3 T TENSOR REMARK 3 T11: 0.7899 T22: 0.3300 REMARK 3 T33: 0.4056 T12: 0.1866 REMARK 3 T13: 0.0628 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.8363 L22: 2.3833 REMARK 3 L33: 0.5090 L12: -0.9640 REMARK 3 L13: 0.0301 L23: -0.1144 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: 0.0352 S13: -0.4471 REMARK 3 S21: -0.0389 S22: -0.0361 S23: 0.0066 REMARK 3 S31: 1.0365 S32: 0.4081 S33: 0.0601 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1154 -33.5538 -33.2750 REMARK 3 T TENSOR REMARK 3 T11: 0.8440 T22: 0.5617 REMARK 3 T33: 0.4651 T12: 0.3637 REMARK 3 T13: 0.0854 T23: -0.0589 REMARK 3 L TENSOR REMARK 3 L11: 0.2801 L22: 0.8026 REMARK 3 L33: 2.8289 L12: -0.2196 REMARK 3 L13: -0.2650 L23: 1.4834 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: 0.0509 S13: -0.2718 REMARK 3 S21: 0.1176 S22: -0.0345 S23: -0.0424 REMARK 3 S31: 1.0201 S32: 0.3188 S33: 0.1473 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.3809 -42.1104 -16.6692 REMARK 3 T TENSOR REMARK 3 T11: 1.0507 T22: 0.7246 REMARK 3 T33: 0.8257 T12: 0.5368 REMARK 3 T13: -0.0988 T23: 0.1770 REMARK 3 L TENSOR REMARK 3 L11: 0.7289 L22: 1.9548 REMARK 3 L33: 0.9828 L12: 0.3108 REMARK 3 L13: 0.2604 L23: -1.0394 REMARK 3 S TENSOR REMARK 3 S11: 0.0318 S12: -0.2497 S13: -0.5989 REMARK 3 S21: 0.6082 S22: 0.0630 S23: -0.1678 REMARK 3 S31: 0.0740 S32: 0.0441 S33: -0.0366 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8935 -28.0110 -16.0110 REMARK 3 T TENSOR REMARK 3 T11: 0.6260 T22: 0.8377 REMARK 3 T33: 0.4336 T12: 0.4953 REMARK 3 T13: 0.0350 T23: 0.0688 REMARK 3 L TENSOR REMARK 3 L11: 1.4900 L22: 0.9392 REMARK 3 L33: 0.5535 L12: -0.7844 REMARK 3 L13: -0.6254 L23: 0.6752 REMARK 3 S TENSOR REMARK 3 S11: -0.2317 S12: -0.3692 S13: -0.3392 REMARK 3 S21: 0.1551 S22: -0.0120 S23: -0.0129 REMARK 3 S31: 0.4635 S32: 0.4806 S33: -0.0714 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 403 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3535 -16.6955 -20.2911 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.4378 REMARK 3 T33: 0.2647 T12: 0.1688 REMARK 3 T13: 0.0444 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.4271 L22: 1.1985 REMARK 3 L33: 0.3038 L12: -0.1422 REMARK 3 L13: -0.3531 L23: 0.0125 REMARK 3 S TENSOR REMARK 3 S11: -0.0864 S12: -0.0951 S13: -0.2109 REMARK 3 S21: 0.0957 S22: 0.0232 S23: -0.1570 REMARK 3 S31: 0.4586 S32: 0.5905 S33: -0.0002 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 404 THROUGH 429 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6506 -12.7370 -34.5899 REMARK 3 T TENSOR REMARK 3 T11: 0.2328 T22: 0.4953 REMARK 3 T33: 0.2462 T12: 0.0966 REMARK 3 T13: 0.0727 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 4.1676 L22: 3.1775 REMARK 3 L33: 0.2911 L12: -2.6993 REMARK 3 L13: 0.2734 L23: 0.4501 REMARK 3 S TENSOR REMARK 3 S11: 0.0926 S12: 0.1911 S13: 0.1624 REMARK 3 S21: -0.1599 S22: -0.0788 S23: -0.3764 REMARK 3 S31: 0.0624 S32: 0.6293 S33: -0.0410 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G7F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-12. REMARK 100 THE DEPOSITION ID IS D_1000073832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97740 REMARK 200 MONOCHROMATOR : ASYMMETRIC CURVED CRYSTAL REMARK 200 SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19797 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.0 REMARK 200 STARTING MODEL: 1OEP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRCRA.01024.A.B1 PW35751 CR_27 REMARK 280 47.62MG/ML MORPHEUS E12 12.5% W/V PEG 1000, 12.5% W/V PEG 3350, REMARK 280 12.5% V/V MPD, 0.03 M OF EACH ETHYLENE GLYCOL 0.1 M BICINE/ REMARK 280 TRIZMA BASE PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.18000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.18000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.64500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 59.65500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.64500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 59.65500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.18000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.64500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.65500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.18000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.64500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 59.65500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 623 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 661 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 39 REMARK 465 SER A 40 REMARK 465 THR A 41 REMARK 465 GLY A 42 REMARK 465 THR A 260 REMARK 465 PHE A 261 REMARK 465 LYS A 262 REMARK 465 SER A 263 REMARK 465 PRO A 264 REMARK 465 GLU A 265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 43 CG1 CG2 CD1 REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 ARG A 55 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 58 CG CD1 CD2 REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 LYS A 90 CG CD CE NZ REMARK 470 LYS A 103 CG CD CE NZ REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 LEU A 143 CG CD1 CD2 REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 HIS A 156 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 159 CG OD1 ND2 REMARK 470 LEU A 161 CG CD1 CD2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 GLN A 200 CG CD OE1 NE2 REMARK 470 ILE A 215 CG1 CG2 CD1 REMARK 470 ILE A 218 CG1 CG2 CD1 REMARK 470 GLU A 220 CG CD OE1 OE2 REMARK 470 LEU A 222 CG CD1 CD2 REMARK 470 ILE A 224 CG1 CG2 CD1 REMARK 470 GLU A 230 CG CD OE1 OE2 REMARK 470 LYS A 235 CG CD CE NZ REMARK 470 ASP A 251 CG OD1 OD2 REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 ASN A 253 CG OD1 ND2 REMARK 470 LYS A 254 CG CD CE NZ REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 GLN A 256 CG CD OE1 NE2 REMARK 470 LEU A 259 CG CD1 CD2 REMARK 470 THR A 267 OG1 CG2 REMARK 470 TRP A 268 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 268 CZ3 CH2 REMARK 470 VAL A 269 CG1 CG2 REMARK 470 THR A 270 OG1 CG2 REMARK 470 LYS A 272 CG CD CE NZ REMARK 470 GLN A 273 CG CD OE1 NE2 REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 GLU A 284 CG CD OE1 OE2 REMARK 470 LYS A 310 CG CD CE NZ REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 VAL A 315 CG1 CG2 REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 LYS A 335 CG CD CE NZ REMARK 470 ILE A 347 CG1 CG2 CD1 REMARK 470 GLU A 355 CG CD OE1 OE2 REMARK 470 HIS A 420 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 422 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 15 NE - CZ - NH1 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG A 15 NE - CZ - NH2 ANGL. DEV. = 4.4 DEGREES REMARK 500 ARG A 32 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 32 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 142 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 142 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 204 157.98 -47.68 REMARK 500 ASP A 292 56.28 33.23 REMARK 500 GLN A 296 2.40 -69.94 REMARK 500 ASP A 298 54.98 -93.65 REMARK 500 ASP A 318 -72.15 -121.78 REMARK 500 THR A 395 19.96 -144.82 REMARK 500 ARG A 400 124.88 85.98 REMARK 500 ALA A 421 128.99 -31.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 243 OD2 REMARK 620 2 GLU A 291 OE2 71.4 REMARK 620 3 ASP A 318 OD2 152.9 81.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1OEP RELATED DB: PDB REMARK 900 STRUCTURE USED TO GENERATE MR MODEL REMARK 900 RELATED ID: SSGCID-TRCRA.01024.A RELATED DB: TARGETTRACK DBREF 4G7F A 1 429 UNP Q4DZ98 Q4DZ98_TRYCC 1 429 SEQRES 1 A 429 MET THR ILE GLN LYS VAL HIS GLY ARG GLU ILE LEU ASP SEQRES 2 A 429 SER ARG GLY ASN PRO THR VAL GLU VAL GLU VAL THR THR SEQRES 3 A 429 GLU LEU GLY VAL PHE ARG SER ALA VAL PRO SER GLY ALA SEQRES 4 A 429 SER THR GLY ILE HIS GLU ALA CYS GLU LEU ARG ASP ASP SEQRES 5 A 429 ASP LYS ARG ARG TYR LEU GLY LYS GLY CYS LEU ASN ALA SEQRES 6 A 429 VAL LYS ASN VAL ASN ASP VAL LEU ALA PRO ALA LEU VAL SEQRES 7 A 429 GLY LYS ASP GLU LEU GLN GLN SER THR LEU ASP LYS LEU SEQRES 8 A 429 MET ARG ASP LEU ASP GLY THR PRO ASN LYS SER LYS LEU SEQRES 9 A 429 GLY ALA ASN ALA ILE LEU GLY CYS SER MET ALA ILE SER SEQRES 10 A 429 LYS ALA ALA ALA ALA ARG LYS GLY VAL PRO LEU TYR ARG SEQRES 11 A 429 TYR LEU ALA GLU LEU ALA GLY THR LYS GLU VAL ARG LEU SEQRES 12 A 429 PRO VAL PRO CYS PHE ASN VAL ILE ASN GLY GLY LYS HIS SEQRES 13 A 429 ALA GLY ASN ALA LEU PRO PHE GLN GLU PHE MET ILE ALA SEQRES 14 A 429 PRO VAL LYS ALA GLY SER PHE ASN GLU ALA LEU ARG MET SEQRES 15 A 429 GLY ALA GLU VAL TYR HIS SER LEU LYS SER ILE ILE LYS SEQRES 16 A 429 LYS LYS TYR GLY GLN ASP ALA VAL ASN VAL GLY ASP GLU SEQRES 17 A 429 GLY GLY PHE ALA PRO PRO ILE THR ASP ILE ASN GLU PRO SEQRES 18 A 429 LEU PRO ILE LEU MET GLU ALA ILE GLU GLN ALA GLY HIS SEQRES 19 A 429 LYS GLY ARG PHE ALA ILE CYS MET ASP SER ALA ALA SER SEQRES 20 A 429 GLU THR TYR ASP GLU ASN LYS LYS GLN TYR ASN LEU THR SEQRES 21 A 429 PHE LYS SER PRO GLU ALA THR TRP VAL THR ALA LYS GLN SEQRES 22 A 429 LEU ALA GLU THR TYR ALA LYS TRP VAL SER GLU TYR PRO SEQRES 23 A 429 ILE VAL SER LEU GLU ASP PRO TYR ASP GLN ASP ASP PHE SEQRES 24 A 429 ASP GLY PHE ALA GLY ILE THR GLU ALA LEU LYS GLY LYS SEQRES 25 A 429 ALA GLN VAL VAL GLY ASP ASP LEU THR VAL THR ASN VAL SEQRES 26 A 429 SER ARG ILE LYS THR ALA ILE GLU LYS LYS ALA CYS ASN SEQRES 27 A 429 SER LEU LEU LEU LYS ILE ASN GLN ILE GLY THR ILE THR SEQRES 28 A 429 GLU ALA ILE GLU ALA SER LYS PHE CYS MET SER ASN GLY SEQRES 29 A 429 TRP SER VAL MET VAL SER HIS ARG SER GLY GLU THR GLU SEQRES 30 A 429 ASP THR TYR ILE ALA ASP LEU VAL VAL GLY LEU GLY THR SEQRES 31 A 429 GLY GLN ILE LYS THR GLY ALA PRO CYS ARG GLY GLU ARG SEQRES 32 A 429 THR ALA LYS LEU ASN GLN LEU LEU ARG ILE GLU GLU GLU SEQRES 33 A 429 LEU GLY ALA HIS ALA LYS PHE GLY PHE PRO ALA TRP SER HET MG A 501 1 HET EDO A 502 10 HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 MG MG 2+ FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *89(H2 O) HELIX 1 1 ARG A 56 LYS A 60 5 5 HELIX 2 2 CYS A 62 VAL A 72 1 11 HELIX 3 3 VAL A 72 VAL A 78 1 7 HELIX 4 4 GLN A 84 GLY A 97 1 14 HELIX 5 5 GLY A 105 GLY A 125 1 21 HELIX 6 6 PRO A 127 GLY A 137 1 11 HELIX 7 7 SER A 175 GLY A 199 1 25 HELIX 8 8 GLN A 200 ASN A 204 5 5 HELIX 9 9 GLU A 220 GLY A 233 1 14 HELIX 10 10 ALA A 245 TYR A 250 5 6 HELIX 11 11 THR A 270 TYR A 285 1 16 HELIX 12 12 ASP A 298 LEU A 309 1 12 HELIX 13 13 ASN A 324 LYS A 334 1 11 HELIX 14 14 LYS A 343 GLY A 348 1 6 HELIX 15 15 THR A 349 ASN A 363 1 15 HELIX 16 16 THR A 379 GLY A 389 1 11 HELIX 17 17 ARG A 400 GLY A 418 1 19 HELIX 18 18 PHE A 425 SER A 429 5 5 SHEET 1 A 3 LYS A 5 LEU A 12 0 SHEET 2 A 3 PRO A 18 THR A 26 -1 O THR A 25 N LYS A 5 SHEET 3 A 3 GLY A 29 ALA A 34 -1 O SER A 33 N VAL A 22 SHEET 1 B 9 VAL A 145 PRO A 146 0 SHEET 2 B 9 GLN A 392 LYS A 394 1 O ILE A 393 N VAL A 145 SHEET 3 B 9 SER A 366 SER A 370 1 N VAL A 369 O LYS A 394 SHEET 4 B 9 SER A 339 LEU A 342 1 N LEU A 342 O MET A 368 SHEET 5 B 9 GLN A 314 GLY A 317 1 N GLY A 317 O SER A 339 SHEET 6 B 9 ILE A 287 GLU A 291 1 N LEU A 290 O VAL A 316 SHEET 7 B 9 ALA A 239 ASP A 243 1 N MET A 242 O SER A 289 SHEET 8 B 9 GLU A 165 ALA A 169 -1 N ALA A 169 O ALA A 239 SHEET 9 B 9 PHE A 148 ASN A 152 -1 N PHE A 148 O ILE A 168 SHEET 1 C 2 TYR A 257 ASN A 258 0 SHEET 2 C 2 TRP A 268 VAL A 269 -1 O VAL A 269 N TYR A 257 LINK OD2 ASP A 243 MG MG A 501 1555 1555 2.27 LINK OE2 GLU A 291 MG MG A 501 1555 1555 2.34 LINK OD2 ASP A 318 MG MG A 501 1555 1555 2.24 SITE 1 AC1 3 ASP A 243 GLU A 291 ASP A 318 SITE 1 AC2 4 GLN A 409 ILE A 413 GLU A 416 HOH A 610 CRYST1 75.290 119.310 110.360 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013282 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009061 0.00000