HEADER MEMBRANE PROTEIN 20-JUL-12 4G7Y TITLE CRYSTAL STRUCTURE OF VOLTAGE SENSING DOMAIN OF CI-VSP WITH FRAGMENT TITLE 2 ANTIBODY (R217E, 2.8 A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRAGMENT ANTIBODY HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FRAGMENT ANTIBODY LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VOLTAGE-SENSOR CONTAINING PHOSPHATASE; COMPND 11 CHAIN: S; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: 55244; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PHAGEMID CODING FOR BOTH HEAVY CHAIN AND SOURCE 9 LIGHT CHAIN OF THE FRAGMENT ANTIBODY; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: 55244; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PHAGEMID CODING FOR BOTH HEAVY CHAIN AND SOURCE 18 LIGHT CHAIN OF THE FRAGMENT ANTIBODY; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: CIONA INTESTINALIS; SOURCE 21 ORGANISM_COMMON: SEA VASE,YELLOW SEA SQUIRT; SOURCE 22 ORGANISM_TAXID: 7719; SOURCE 23 GENE: CI-VSP; SOURCE 24 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 26 EXPRESSION_SYSTEM_STRAIN: XL10-GOLD; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 28 EXPRESSION_SYSTEM_PLASMID: PQE32 WITH SEQUENCE ENCODING FOR CI-VSD KEYWDS MEMBRANE PROTEIN, ALPHA HELIX, FRAGMENT ANTIBODY, VOLTAGE SENSING KEYWDS 2 DOMAIN, SENSING VOLTAGE EXPDTA X-RAY DIFFRACTION AUTHOR Q.LI REVDAT 4 17-JUL-19 4G7Y 1 REMARK REVDAT 3 13-DEC-17 4G7Y 1 JRNL REVDAT 2 15-NOV-17 4G7Y 1 REMARK REVDAT 1 05-FEB-14 4G7Y 0 JRNL AUTH Q.LI,S.WANDERLING,M.PADUCH,D.MEDOVOY,A.SINGHAROY,R.MCGREEVY, JRNL AUTH 2 C.A.VILLALBA-GALEA,R.E.HULSE,B.ROUX,K.SCHULTEN,A.KOSSIAKOFF, JRNL AUTH 3 E.PEROZO JRNL TITL STRUCTURAL MECHANISM OF VOLTAGE-DEPENDENT GATING IN AN JRNL TITL 2 ISOLATED VOLTAGE-SENSING DOMAIN. JRNL REF NAT. STRUCT. MOL. BIOL. V. 21 244 2014 JRNL REFN ESSN 1545-9985 JRNL PMID 24487958 JRNL DOI 10.1038/NSMB.2768 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 104.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23891 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1285 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1514 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.3380 REMARK 3 BIN FREE R VALUE SET COUNT : 91 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4256 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 35 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.96000 REMARK 3 B22 (A**2) : 0.96000 REMARK 3 B33 (A**2) : -1.44000 REMARK 3 B12 (A**2) : 0.48000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.474 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.316 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.674 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4382 ; 0.014 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4209 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5964 ; 1.634 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9516 ; 0.820 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 552 ; 7.451 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;33.048 ;23.605 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 691 ;15.926 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;21.231 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 680 ; 0.085 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4934 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1004 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4G7Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000073851. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-11; 11-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0; NULL REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 23-ID-B; 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL; NULL REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : MAR 300 CCD; ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24429 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 104.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, 0.3 M MGCL2, 24% PEG REMARK 280 2000, 10% GLYCEROL, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 153.04667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 76.52333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 114.78500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 38.26167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 191.30833 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 153.04667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 76.52333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 38.26167 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 114.78500 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 191.30833 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, S REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL L 301 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 133 REMARK 465 SER H 134 REMARK 465 LYS H 135 REMARK 465 SER H 136 REMARK 465 THR H 137 REMARK 465 SER H 138 REMARK 465 GLY H 139 REMARK 465 MET S 79 REMARK 465 ARG S 80 REMARK 465 GLY S 81 REMARK 465 SER S 82 REMARK 465 HIS S 83 REMARK 465 HIS S 84 REMARK 465 HIS S 85 REMARK 465 HIS S 86 REMARK 465 HIS S 87 REMARK 465 HIS S 88 REMARK 465 GLY S 89 REMARK 465 VAL S 90 REMARK 465 ASP S 91 REMARK 465 ASP S 92 REMARK 465 GLY S 93 REMARK 465 ARG S 94 REMARK 465 MET S 95 REMARK 465 GLU S 96 REMARK 465 ILE S 97 REMARK 465 PRO S 98 REMARK 465 THR S 99 REMARK 465 THR S 100 REMARK 465 GLY S 101 REMARK 465 VAL S 102 REMARK 465 GLY S 103 REMARK 465 TYR S 235 REMARK 465 SER S 236 REMARK 465 HIS S 237 REMARK 465 GLN S 238 REMARK 465 GLN S 239 REMARK 465 MET S 240 REMARK 465 LYS S 241 REMARK 465 ALA S 242 REMARK 465 SER S 243 REMARK 465 SER S 244 REMARK 465 ARG S 245 REMARK 465 ARG S 246 REMARK 465 THR S 247 REMARK 465 ILE S 248 REMARK 465 SER S 249 REMARK 465 GLN S 250 REMARK 465 ASN S 251 REMARK 465 LYS S 252 REMARK 465 ARG S 253 REMARK 465 ARG S 254 REMARK 465 TYR S 255 REMARK 465 ARG S 256 REMARK 465 LYS S 257 REMARK 465 ASP S 258 REMARK 465 GLY S 259 REMARK 465 PHE S 260 REMARK 465 LYS S 261 REMARK 465 LEU S 262 REMARK 465 ASN S 263 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 304 O HOH H 305 1.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG L 211 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 150 78.32 57.02 REMARK 500 THR H 166 -36.99 -132.76 REMARK 500 ASN H 205 117.83 -161.80 REMARK 500 PRO H 208 -4.64 -58.88 REMARK 500 ASN H 210 13.72 52.14 REMARK 500 SER L 30 -138.09 59.71 REMARK 500 ALA L 51 -43.65 73.23 REMARK 500 SER L 52 12.63 -144.57 REMARK 500 ALA L 84 179.52 178.72 REMARK 500 LYS L 126 11.51 -67.77 REMARK 500 ASN L 138 78.22 46.00 REMARK 500 ASN L 152 -3.74 61.26 REMARK 500 ASP S 114 29.90 -70.87 REMARK 500 LEU S 116 85.37 83.47 REMARK 500 ASP S 164 -31.78 -33.84 REMARK 500 ARG S 168 -2.01 -58.68 REMARK 500 VAL S 202 -52.00 -140.79 REMARK 500 GLU S 205 71.67 -108.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG L 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH H 305 O REMARK 620 2 HOH H 302 O 103.3 REMARK 620 3 HOH H 304 O 44.9 78.7 REMARK 620 4 HOH L 410 O 116.4 83.9 148.6 REMARK 620 5 HOH H 303 O 57.7 56.5 70.1 78.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LDA S 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4G7V RELATED DB: PDB REMARK 900 RELATED ID: 4G80 RELATED DB: PDB DBREF 4G7Y S 89 260 UNP Q4W8A1 Q4W8A1_CIOIN 89 260 DBREF 4G7Y H 1 219 PDB 4G7Y 4G7Y 1 219 DBREF 4G7Y L 1 211 PDB 4G7Y 4G7Y 1 211 SEQADV 4G7Y MET S 79 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y ARG S 80 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y GLY S 81 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y SER S 82 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y HIS S 83 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y HIS S 84 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y HIS S 85 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y HIS S 86 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y HIS S 87 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y HIS S 88 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y GLU S 217 UNP Q4W8A1 ARG 217 ENGINEERED MUTATION SEQADV 4G7Y LYS S 261 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y LEU S 262 UNP Q4W8A1 EXPRESSION TAG SEQADV 4G7Y ASN S 263 UNP Q4W8A1 EXPRESSION TAG SEQRES 1 H 219 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 219 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 219 PHE ASN VAL SER SER SER SER ILE HIS TRP VAL ARG GLN SEQRES 4 H 219 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SER ILE SER SEQRES 5 H 219 SER TYR TYR GLY TYR THR SER TYR ALA ASP SER VAL LYS SEQRES 6 H 219 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 H 219 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 219 ALA VAL TYR TYR CYS ALA ARG SER TYR SER TRP SER TYR SEQRES 9 H 219 ALA ILE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 H 219 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 H 219 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 H 219 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 H 219 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 H 219 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 H 219 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 H 219 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 H 219 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 1 L 211 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 211 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 211 GLN SER VAL SER SER ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 L 211 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 L 211 SER LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 211 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 211 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 L 211 PHE TYR TRP PRO ILE THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 L 211 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 211 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 211 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 211 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN ALA SEQRES 13 L 211 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 211 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 211 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 211 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 211 PHE ASN ARG SEQRES 1 S 185 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY VAL ASP SEQRES 2 S 185 ASP GLY ARG MET GLU ILE PRO THR THR GLY VAL GLY ARG SEQRES 3 S 185 VAL GLN PHE ARG VAL ARG ALA VAL ILE ASP HIS LEU GLY SEQRES 4 S 185 MET ARG VAL PHE GLY VAL PHE LEU ILE PHE LEU ASP ILE SEQRES 5 S 185 ILE LEU MET ILE ILE ASP LEU SER LEU PRO GLY LYS SER SEQRES 6 S 185 GLU SER SER GLN SER PHE TYR ASP GLY MET ALA LEU ALA SEQRES 7 S 185 LEU SER CYS TYR PHE MET LEU ASP LEU GLY LEU ARG ILE SEQRES 8 S 185 PHE ALA TYR GLY PRO LYS ASN PHE PHE THR ASN PRO TRP SEQRES 9 S 185 GLU VAL ALA ASP GLY LEU ILE ILE VAL VAL THR PHE VAL SEQRES 10 S 185 VAL THR ILE PHE TYR THR VAL LEU ASP GLU TYR VAL GLN SEQRES 11 S 185 GLU THR GLY ALA ASP GLY LEU GLY GLU LEU VAL VAL LEU SEQRES 12 S 185 ALA ARG LEU LEU ARG VAL VAL ARG LEU ALA ARG ILE PHE SEQRES 13 S 185 TYR SER HIS GLN GLN MET LYS ALA SER SER ARG ARG THR SEQRES 14 S 185 ILE SER GLN ASN LYS ARG ARG TYR ARG LYS ASP GLY PHE SEQRES 15 S 185 LYS LEU ASN HET CL L 301 1 HET MG L 302 1 HET LDA S 301 16 HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM LDA LAURYL DIMETHYLAMINE-N-OXIDE FORMUL 4 CL CL 1- FORMUL 5 MG MG 2+ FORMUL 6 LDA C14 H31 N O FORMUL 7 HOH *35(H2 O) HELIX 1 1 ASN H 28 SER H 32 5 5 HELIX 2 2 SER H 53 GLY H 56 5 4 HELIX 3 3 ARG H 87 THR H 91 5 5 HELIX 4 4 SER H 193 LEU H 195 5 3 HELIX 5 5 LYS H 207 ASN H 210 5 4 HELIX 6 6 GLN L 79 PHE L 83 5 5 HELIX 7 7 SER L 121 LYS L 126 1 6 HELIX 8 8 LYS L 183 HIS L 189 1 7 HELIX 9 9 GLN S 106 ASP S 114 1 9 HELIX 10 10 GLY S 117 LEU S 139 1 23 HELIX 11 11 SER S 143 GLY S 166 1 24 HELIX 12 12 GLY S 173 ASN S 180 1 8 HELIX 13 13 ASN S 180 VAL S 202 1 23 HELIX 14 14 TYR S 206 GLY S 211 5 6 HELIX 15 15 GLY S 214 ILE S 233 1 20 SHEET 1 A 4 GLN H 3 SER H 7 0 SHEET 2 A 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 A 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 A 4 PHE H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 B 6 GLY H 10 VAL H 12 0 SHEET 2 B 6 THR H 113 VAL H 117 1 O THR H 116 N GLY H 10 SHEET 3 B 6 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 115 SHEET 4 B 6 SER H 33 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 B 6 GLU H 46 SER H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 B 6 TYR H 57 TYR H 60 -1 O TYR H 57 N SER H 52 SHEET 1 C 4 GLY H 10 VAL H 12 0 SHEET 2 C 4 THR H 113 VAL H 117 1 O THR H 116 N GLY H 10 SHEET 3 C 4 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 115 SHEET 4 C 4 ILE H 106 TRP H 109 -1 O ASP H 107 N ARG H 98 SHEET 1 D 4 SER H 126 LEU H 130 0 SHEET 2 D 4 THR H 141 TYR H 151 -1 O LYS H 149 N SER H 126 SHEET 3 D 4 TYR H 182 PRO H 191 -1 O VAL H 190 N ALA H 142 SHEET 4 D 4 HIS H 170 THR H 171 -1 N HIS H 170 O VAL H 187 SHEET 1 E 4 SER H 126 LEU H 130 0 SHEET 2 E 4 THR H 141 TYR H 151 -1 O LYS H 149 N SER H 126 SHEET 3 E 4 TYR H 182 PRO H 191 -1 O VAL H 190 N ALA H 142 SHEET 4 E 4 VAL H 175 LEU H 176 -1 N VAL H 175 O SER H 183 SHEET 1 F 3 SER H 159 TRP H 160 0 SHEET 2 F 3 TYR H 200 HIS H 206 -1 O ASN H 203 N SER H 159 SHEET 3 F 3 THR H 211 VAL H 217 -1 O THR H 211 N HIS H 206 SHEET 1 G 4 MET L 4 SER L 7 0 SHEET 2 G 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 G 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 G 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 H 6 SER L 10 SER L 14 0 SHEET 2 H 6 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 H 6 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 H 6 VAL L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 H 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 H 6 SER L 53 LEU L 54 -1 O SER L 53 N TYR L 49 SHEET 1 I 4 SER L 10 SER L 14 0 SHEET 2 I 4 THR L 102 LYS L 107 1 O LYS L 107 N ALA L 13 SHEET 3 I 4 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 I 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 J 4 SER L 114 PHE L 118 0 SHEET 2 J 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 J 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 J 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 K 4 ALA L 153 GLN L 155 0 SHEET 2 K 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 K 4 VAL L 191 THR L 197 -1 O THR L 197 N LYS L 145 SHEET 4 K 4 VAL L 205 ASN L 210 -1 O PHE L 209 N TYR L 192 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.08 SSBOND 2 CYS H 146 CYS H 202 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.10 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.09 LINK MG MG L 302 O HOH H 305 1555 1555 2.37 LINK MG MG L 302 O HOH H 302 1555 1555 2.43 LINK MG MG L 302 O HOH H 304 1555 1555 2.58 LINK MG MG L 302 O HOH L 410 1555 1555 2.61 LINK MG MG L 302 O HOH H 303 1555 1555 2.67 CISPEP 1 PHE H 152 PRO H 153 0 -9.95 CISPEP 2 GLU H 154 PRO H 155 0 -0.25 CISPEP 3 SER L 7 PRO L 8 0 -8.85 CISPEP 4 TRP L 94 PRO L 95 0 2.47 CISPEP 5 TYR L 140 PRO L 141 0 -2.63 CISPEP 6 LEU S 116 GLY S 117 0 -4.23 CISPEP 7 ASP S 204 GLU S 205 0 7.09 SITE 1 AC1 2 PRO L 59 ARG L 61 SITE 1 AC2 6 HOH H 302 HOH H 303 HOH H 304 HOH H 305 SITE 2 AC2 6 ASP L 167 HOH L 410 SITE 1 AC3 6 SER L 28 PHE L 92 TYR L 93 VAL S 196 SITE 2 AC3 6 PHE S 199 ASP S 204 CRYST1 121.010 121.010 229.570 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008264 0.004771 0.000000 0.00000 SCALE2 0.000000 0.009542 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004356 0.00000