HEADER OXIDOREDUCTASE 23-JUL-12 4G8S TITLE CRYSTAL STRUCTURE OF A PUTATIVE NITROREDUCTASE FROM GEOBACTER TITLE 2 SULFURREDUCENS PCA (TARGET PSI-013445) COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITROREDUCTASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACTER SULFURREDUCENS; SOURCE 3 ORGANISM_TAXID: 243231; SOURCE 4 STRAIN: PCA, ATCC 51573; SOURCE 5 GENE: GSU0217; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGC KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS KEYWDS 2 RESEARCH CONSORTIUM (NYSGRC), OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.R.KUMAR,R.BHOSLE,B.HILLERICH,R.SEIDEL,R.TORO,S.C.ALMO,NEW YORK AUTHOR 2 STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 1 08-AUG-12 4G8S 0 JRNL AUTH P.R.KUMAR,M.AHMED,N.BANU,R.BHOSLE,J.BONANNO,S.CHAMALA, JRNL AUTH 2 S.CHOWDHURY,A.GIZZI,S.GLEN,J.HAMMONDS,B.HILLERICH,J.D.LOVE, JRNL AUTH 3 R.SEIDEL,M.STEAD,R.TORO,E.WASHINGTON,S.C.ALMO, JRNL AUTH 4 NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) JRNL TITL CRYSTAL STRUCTURE OF A NITROREDUCTASE FROM GEOBACTER JRNL TITL 2 SULFURREDUCENS PCA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 24421 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.150 REMARK 3 FREE R VALUE TEST SET COUNT : 1990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7435 - 5.2979 0.99 1766 155 0.1849 0.2048 REMARK 3 2 5.2979 - 4.2071 1.00 1670 149 0.1386 0.1628 REMARK 3 3 4.2071 - 3.6758 1.00 1630 145 0.1400 0.1698 REMARK 3 4 3.6758 - 3.3400 1.00 1623 144 0.1499 0.1779 REMARK 3 5 3.3400 - 3.1007 1.00 1611 142 0.1785 0.2078 REMARK 3 6 3.1007 - 2.9180 1.00 1591 141 0.1748 0.2482 REMARK 3 7 2.9180 - 2.7719 1.00 1601 143 0.1702 0.2132 REMARK 3 8 2.7719 - 2.6513 1.00 1581 140 0.1638 0.1951 REMARK 3 9 2.6513 - 2.5492 1.00 1578 140 0.1603 0.2226 REMARK 3 10 2.5492 - 2.4613 0.99 1553 139 0.1660 0.2023 REMARK 3 11 2.4613 - 2.3843 0.99 1566 139 0.1676 0.2346 REMARK 3 12 2.3843 - 2.3162 0.99 1561 140 0.1755 0.2019 REMARK 3 13 2.3162 - 2.2552 0.98 1555 139 0.1799 0.2493 REMARK 3 14 2.2552 - 2.2002 0.98 1545 134 0.1908 0.2227 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.10 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2939 REMARK 3 ANGLE : 1.029 3993 REMARK 3 CHIRALITY : 0.066 437 REMARK 3 PLANARITY : 0.005 515 REMARK 3 DIHEDRAL : 13.494 1088 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: chain 'A' and (resseq 1:98) REMARK 3 ORIGIN FOR THE GROUP (A): 23.1485 7.3636 65.8817 REMARK 3 T TENSOR REMARK 3 T11: 0.2976 T22: 0.0565 REMARK 3 T33: 0.2157 T12: 0.0027 REMARK 3 T13: -0.0331 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 1.7623 L22: 2.4291 REMARK 3 L33: 1.1024 L12: 0.4301 REMARK 3 L13: 0.2000 L23: 0.3935 REMARK 3 S TENSOR REMARK 3 S11: -0.0466 S12: -0.0986 S13: 0.0503 REMARK 3 S21: 0.1848 S22: 0.0770 S23: 0.2353 REMARK 3 S31: -0.1085 S32: -0.0895 S33: -0.0234 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: chain 'A' and (resseq 99:133) REMARK 3 ORIGIN FOR THE GROUP (A): 30.9599 6.5698 59.4582 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 0.0666 REMARK 3 T33: 0.1737 T12: -0.0226 REMARK 3 T13: -0.0381 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 1.5809 L22: 1.6776 REMARK 3 L33: 0.1256 L12: 0.1146 REMARK 3 L13: 0.0186 L23: -0.4558 REMARK 3 S TENSOR REMARK 3 S11: -0.0882 S12: 0.1199 S13: -0.1771 REMARK 3 S21: 0.1587 S22: -0.0236 S23: 0.1080 REMARK 3 S31: 0.3485 S32: -0.0350 S33: -0.0266 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: chain 'A' and (resseq 134:187) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3169 5.7158 58.3476 REMARK 3 T TENSOR REMARK 3 T11: 0.3103 T22: 0.0728 REMARK 3 T33: 0.2311 T12: -0.0307 REMARK 3 T13: -0.0491 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 0.6690 L22: 1.5495 REMARK 3 L33: 0.4670 L12: -0.2568 REMARK 3 L13: 0.0988 L23: -0.0656 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: 0.1247 S13: 0.0630 REMARK 3 S21: -0.2626 S22: -0.0229 S23: 0.3155 REMARK 3 S31: -0.0298 S32: -0.0165 S33: -0.0635 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: chain 'B' and (resseq 1:98) REMARK 3 ORIGIN FOR THE GROUP (A): 45.9418 9.7506 54.3674 REMARK 3 T TENSOR REMARK 3 T11: 0.2528 T22: 0.2280 REMARK 3 T33: 0.2190 T12: -0.0974 REMARK 3 T13: -0.0364 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.2562 L22: 1.9096 REMARK 3 L33: 2.1119 L12: -0.1984 REMARK 3 L13: 0.2253 L23: 0.3645 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.3140 S13: 0.1741 REMARK 3 S21: -0.1250 S22: 0.0371 S23: -0.2756 REMARK 3 S31: -0.3116 S32: 0.5260 S33: -0.0677 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: chain 'B' and (resseq 99:133) REMARK 3 ORIGIN FOR THE GROUP (A): 37.6597 6.0548 58.5949 REMARK 3 T TENSOR REMARK 3 T11: 0.3304 T22: 0.1196 REMARK 3 T33: 0.1319 T12: -0.0286 REMARK 3 T13: -0.0542 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.2921 L22: 1.6704 REMARK 3 L33: 1.7751 L12: 0.2434 REMARK 3 L13: -0.1578 L23: 0.3419 REMARK 3 S TENSOR REMARK 3 S11: -0.2728 S12: 0.3310 S13: -0.0177 REMARK 3 S21: -0.4089 S22: 0.3364 S23: 0.0243 REMARK 3 S31: -0.0448 S32: 0.2213 S33: 0.0615 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: chain 'B' and (resseq 134:186) REMARK 3 ORIGIN FOR THE GROUP (A): 49.0322 2.1820 57.6976 REMARK 3 T TENSOR REMARK 3 T11: 0.1824 T22: 0.2467 REMARK 3 T33: 0.2088 T12: 0.0188 REMARK 3 T13: -0.0127 T23: -0.0642 REMARK 3 L TENSOR REMARK 3 L11: 3.1022 L22: 3.6406 REMARK 3 L33: 2.8593 L12: 0.2153 REMARK 3 L13: 0.0053 L23: -0.1006 REMARK 3 S TENSOR REMARK 3 S11: -0.0698 S12: 0.1191 S13: -0.1734 REMARK 3 S21: -0.1137 S22: 0.0435 S23: -0.4647 REMARK 3 S31: 0.1717 S32: 0.6224 S33: 0.0535 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-12. REMARK 100 THE RCSB ID CODE IS RCSB073881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45382 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.300 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (20 MM HEPES, PH 7.5, 150 MM REMARK 280 NACL, 10% GLYCEROL, RESERVOIR (0.2M POTASSIUM CHLORIDE, 20% PEG REMARK 280 3350 - MCSG1 #89), CRYOPROTECTION (ETHYLENE GLYCOL), SITTING REMARK 280 DROP, VAPOR DIFFUSION, TEMPERATURE 298K, VAPOR DIFFUSION, SITTING REMARK 280 DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.73600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.87950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.87950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 127.10400 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.87950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.87950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 42.36800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.87950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.87950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 127.10400 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.87950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.87950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.36800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.73600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A DIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 GLU A 164 REMARK 465 GLU A 165 REMARK 465 THR A 166 REMARK 465 GLN A 167 REMARK 465 ALA A 168 REMARK 465 LYS A 169 REMARK 465 SER A 170 REMARK 465 GLY A 171 REMARK 465 SER A 188 REMARK 465 MSE B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLU B 164 REMARK 465 GLU B 165 REMARK 465 THR B 166 REMARK 465 GLN B 167 REMARK 465 ALA B 168 REMARK 465 LYS B 169 REMARK 465 LYS B 187 REMARK 465 SER B 188 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG B 75 N CA C O CB CG CD REMARK 480 ARG B 75 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 0 -79.11 -110.14 REMARK 500 LEU A 72 122.64 -39.89 REMARK 500 GLN B 43 70.39 51.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGRC-013445 RELATED DB: TARGETTRACK DBREF 4G8S A 1 188 UNP Q74GM9 Q74GM9_GEOSL 1 188 DBREF 4G8S B 1 188 UNP Q74GM9 Q74GM9_GEOSL 1 188 SEQADV 4G8S MSE A -21 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS A -20 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS A -19 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS A -18 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS A -17 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS A -16 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS A -15 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S SER A -14 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S SER A -13 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLY A -12 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S VAL A -11 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S ASP A -10 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S LEU A -9 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLY A -8 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S THR A -7 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLU A -6 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S ASN A -5 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S LEU A -4 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S TYR A -3 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S PHE A -2 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLN A -1 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S SER A 0 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S MSE B -21 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS B -20 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS B -19 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS B -18 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS B -17 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS B -16 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S HIS B -15 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S SER B -14 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S SER B -13 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLY B -12 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S VAL B -11 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S ASP B -10 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S LEU B -9 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLY B -8 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S THR B -7 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLU B -6 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S ASN B -5 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S LEU B -4 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S TYR B -3 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S PHE B -2 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S GLN B -1 UNP Q74GM9 EXPRESSION TAG SEQADV 4G8S SER B 0 UNP Q74GM9 EXPRESSION TAG SEQRES 1 A 210 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 210 GLY THR GLU ASN LEU TYR PHE GLN SER MSE ASP THR LEU SEQRES 3 A 210 GLU ALA ILE ARG THR ARG ARG SER VAL ARG ALA PHE SER SEQRES 4 A 210 ASP ARG PRO VAL GLU PRO GLU LYS LEU GLN MSE VAL LEU SEQRES 5 A 210 GLU ALA ALA ARG GLN ALA PRO SER TRP ALA ASN MSE GLN SEQRES 6 A 210 CYS SER ARG PHE VAL VAL VAL GLN ASP ALA GLU VAL LYS SEQRES 7 A 210 ALA LYS ILE SER GLU LEU SER PHE VAL GLU ALA PHE PHE SEQRES 8 A 210 ALA PRO LEU GLY TYR ARG THR ASN PRO ALA GLN LYS ALA SEQRES 9 A 210 LEU ALA GLU ALA PRO VAL VAL ILE VAL ALA CYS GLY VAL SEQRES 10 A 210 PRO GLY GLU SER GLY ASP LEU ARG GLY GLN GLN TYR TYR SEQRES 11 A 210 MSE THR ASP VAL GLY ILE ALA THR GLU ASN LEU MSE LEU SEQRES 12 A 210 ALA ALA HIS ALA VAL GLY LEU GLY SER VAL PHE VAL GLY SEQRES 13 A 210 VAL PHE GLY GLU GLU GLN LEU GLY ASP LEU LEU ASP ILE SEQRES 14 A 210 PRO PRO GLU ILE ARG ILE VAL GLY LEU PHE PRO LEU GLY SEQRES 15 A 210 TYR PRO ARG GLU GLU THR GLN ALA LYS SER GLY PRO ALA SEQRES 16 A 210 ARG LYS PRO LEU ASP GLU ILE VAL PHE GLN GLY LYS TRP SEQRES 17 A 210 LYS SER SEQRES 1 B 210 MSE HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 210 GLY THR GLU ASN LEU TYR PHE GLN SER MSE ASP THR LEU SEQRES 3 B 210 GLU ALA ILE ARG THR ARG ARG SER VAL ARG ALA PHE SER SEQRES 4 B 210 ASP ARG PRO VAL GLU PRO GLU LYS LEU GLN MSE VAL LEU SEQRES 5 B 210 GLU ALA ALA ARG GLN ALA PRO SER TRP ALA ASN MSE GLN SEQRES 6 B 210 CYS SER ARG PHE VAL VAL VAL GLN ASP ALA GLU VAL LYS SEQRES 7 B 210 ALA LYS ILE SER GLU LEU SER PHE VAL GLU ALA PHE PHE SEQRES 8 B 210 ALA PRO LEU GLY TYR ARG THR ASN PRO ALA GLN LYS ALA SEQRES 9 B 210 LEU ALA GLU ALA PRO VAL VAL ILE VAL ALA CYS GLY VAL SEQRES 10 B 210 PRO GLY GLU SER GLY ASP LEU ARG GLY GLN GLN TYR TYR SEQRES 11 B 210 MSE THR ASP VAL GLY ILE ALA THR GLU ASN LEU MSE LEU SEQRES 12 B 210 ALA ALA HIS ALA VAL GLY LEU GLY SER VAL PHE VAL GLY SEQRES 13 B 210 VAL PHE GLY GLU GLU GLN LEU GLY ASP LEU LEU ASP ILE SEQRES 14 B 210 PRO PRO GLU ILE ARG ILE VAL GLY LEU PHE PRO LEU GLY SEQRES 15 B 210 TYR PRO ARG GLU GLU THR GLN ALA LYS SER GLY PRO ALA SEQRES 16 B 210 ARG LYS PRO LEU ASP GLU ILE VAL PHE GLN GLY LYS TRP SEQRES 17 B 210 LYS SER MODRES 4G8S MSE A 1 MET SELENOMETHIONINE MODRES 4G8S MSE A 28 MET SELENOMETHIONINE MODRES 4G8S MSE A 42 MET SELENOMETHIONINE MODRES 4G8S MSE A 109 MET SELENOMETHIONINE MODRES 4G8S MSE A 120 MET SELENOMETHIONINE MODRES 4G8S MSE B 1 MET SELENOMETHIONINE MODRES 4G8S MSE B 28 MET SELENOMETHIONINE MODRES 4G8S MSE B 42 MET SELENOMETHIONINE MODRES 4G8S MSE B 109 MET SELENOMETHIONINE MODRES 4G8S MSE B 120 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 28 8 HET MSE A 42 8 HET MSE A 109 8 HET MSE A 120 8 HET MSE B 1 8 HET MSE B 28 8 HET MSE B 42 8 HET MSE B 109 8 HET MSE B 120 8 HET FMN A 300 31 HET FMN B 201 31 HET GOL B 202 6 HETNAM MSE SELENOMETHIONINE HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM GOL GLYCEROL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *109(H2 O) HELIX 1 1 ASP A 2 ARG A 10 1 9 HELIX 2 2 GLU A 22 GLN A 35 1 14 HELIX 3 3 SER A 38 MSE A 42 5 5 HELIX 4 4 ASP A 52 SER A 63 1 12 HELIX 5 5 GLU A 66 ALA A 70 5 5 HELIX 6 6 ALA A 79 ALA A 86 1 8 HELIX 7 7 PRO A 96 SER A 99 5 4 HELIX 8 8 TYR A 107 VAL A 126 1 20 HELIX 9 9 GLY A 137 ASP A 146 1 10 HELIX 10 10 PRO A 176 ILE A 180 1 5 HELIX 11 11 ASP B 2 ARG B 10 1 9 HELIX 12 12 GLU B 22 GLN B 35 1 14 HELIX 13 13 SER B 38 MSE B 42 5 5 HELIX 14 14 ASP B 52 LEU B 62 1 11 HELIX 15 15 GLU B 66 ALA B 70 5 5 HELIX 16 16 ALA B 79 ALA B 86 1 8 HELIX 17 17 PRO B 96 SER B 99 5 4 HELIX 18 18 TYR B 107 VAL B 126 1 20 HELIX 19 19 GLY B 137 ASP B 146 1 10 HELIX 20 20 PRO B 176 GLU B 179 5 4 SHEET 1 A 5 GLY A 129 SER A 130 0 SHEET 2 A 5 ARG A 152 GLY A 160 -1 O GLY A 160 N GLY A 129 SHEET 3 A 5 VAL A 88 GLY A 94 -1 N ALA A 92 O GLY A 155 SHEET 4 A 5 SER A 45 VAL A 50 -1 N ARG A 46 O CYS A 93 SHEET 5 A 5 VAL A 181 GLN A 183 1 O PHE A 182 N VAL A 49 SHEET 1 B 2 ASP A 101 LEU A 102 0 SHEET 2 B 2 GLN A 105 GLN A 106 -1 O GLN A 105 N LEU A 102 SHEET 1 C 5 GLY B 129 SER B 130 0 SHEET 2 C 5 ARG B 152 GLY B 160 -1 O GLY B 160 N GLY B 129 SHEET 3 C 5 VAL B 88 GLY B 94 -1 N VAL B 88 O LEU B 159 SHEET 4 C 5 SER B 45 VAL B 50 -1 N ARG B 46 O CYS B 93 SHEET 5 C 5 VAL B 181 GLN B 183 1 O PHE B 182 N PHE B 47 SHEET 1 D 2 ASP B 101 LEU B 102 0 SHEET 2 D 2 GLN B 105 GLN B 106 -1 O GLN B 105 N LEU B 102 LINK C SER A 0 N MSE A 1 1555 1555 1.32 LINK C MSE A 1 N ASP A 2 1555 1555 1.32 LINK C GLN A 27 N MSE A 28 1555 1555 1.33 LINK C MSE A 28 N VAL A 29 1555 1555 1.32 LINK C ASN A 41 N MSE A 42 1555 1555 1.33 LINK C MSE A 42 N GLN A 43 1555 1555 1.33 LINK C TYR A 108 N MSE A 109 1555 1555 1.33 LINK C MSE A 109 N THR A 110 1555 1555 1.33 LINK C LEU A 119 N MSE A 120 1555 1555 1.33 LINK C MSE A 120 N LEU A 121 1555 1555 1.33 LINK C SER B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ASP B 2 1555 1555 1.33 LINK C GLN B 27 N MSE B 28 1555 1555 1.33 LINK C MSE B 28 N VAL B 29 1555 1555 1.32 LINK C ASN B 41 N MSE B 42 1555 1555 1.33 LINK C MSE B 42 N GLN B 43 1555 1555 1.33 LINK C TYR B 108 N MSE B 109 1555 1555 1.33 LINK C MSE B 109 N THR B 110 1555 1555 1.32 LINK C LEU B 119 N MSE B 120 1555 1555 1.32 LINK C MSE B 120 N LEU B 121 1555 1555 1.33 SITE 1 AC1 23 ARG A 10 ARG A 11 SER A 12 ARG A 14 SITE 2 AC1 23 TYR A 74 ASN A 77 PRO A 78 ALA A 79 SITE 3 AC1 23 PHE A 132 VAL A 133 GLY A 134 VAL A 135 SITE 4 AC1 23 HOH A 430 HOH A 442 PRO B 37 SER B 38 SITE 5 AC1 23 TRP B 39 ASN B 41 PHE B 68 ASP B 111 SITE 6 AC1 23 ILE B 114 PRO B 172 ARG B 174 SITE 1 AC2 20 PRO A 37 SER A 38 TRP A 39 ASN A 41 SITE 2 AC2 20 ASP A 111 PRO A 172 ARG A 174 ARG B 10 SITE 3 AC2 20 ARG B 11 SER B 12 ARG B 14 TYR B 74 SITE 4 AC2 20 ASN B 77 PRO B 78 ALA B 79 PHE B 132 SITE 5 AC2 20 VAL B 133 GLY B 134 VAL B 135 HOH B 328 SITE 1 AC3 5 VAL B 95 PRO B 96 GLY B 97 GLU B 150 SITE 2 AC3 5 ILE B 151 CRYST1 73.759 73.759 169.472 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013558 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005901 0.00000