HEADER TRANSCRIPTION/DNA 23-JUL-12 4G92 TITLE CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS WITH DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HAPB PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 231-293; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: TRANSCRIPTION FACTOR HAPC (EUROFUNG); COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 42-132; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HAPE; COMPND 13 CHAIN: C; COMPND 14 FRAGMENT: UNP RESIDUES 47-164; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: DNA; COMPND 18 CHAIN: D; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: DNA; COMPND 22 CHAIN: E; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS; SOURCE 3 ORGANISM_TAXID: 162425; SOURCE 4 GENE: HAPB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS; SOURCE 9 ORGANISM_TAXID: 227321; SOURCE 10 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 11 GENE: AN4034.2, ANIA_04034; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS; SOURCE 16 ORGANISM_TAXID: 227321; SOURCE 17 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 18 GENE: AN6492.2; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 SYNTHETIC: YES; SOURCE 23 MOL_ID: 5; SOURCE 24 SYNTHETIC: YES KEYWDS TRANSCRIPTION FACTOR, NUCLEOSOME, MINOR GROOVE BINDING, CCAAT-BINDING KEYWDS 2 COMPLEX, HISTONE FOLD MOTIF, SPECIFIC BINDING TO THE CCAAT-BOX, DNA, KEYWDS 3 NUCLEUS, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.M.HUBER,D.H.SCHARF,P.HORTSCHANSKY,M.GROLL,A.A.BRAKHAGE REVDAT 2 13-SEP-23 4G92 1 REMARK SEQADV REVDAT 1 31-OCT-12 4G92 0 JRNL AUTH E.M.HUBER,D.H.SCHARF,P.HORTSCHANSKY,M.GROLL,A.A.BRAKHAGE JRNL TITL DNA MINOR GROOVE SENSING AND WIDENING BY THE CCAAT-BINDING JRNL TITL 2 COMPLEX. JRNL REF STRUCTURE V. 20 1757 2012 JRNL REFN ISSN 0969-2126 JRNL PMID 22902862 JRNL DOI 10.1016/J.STR.2012.07.012 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0119 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 49104 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2728 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3512 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.08 REMARK 3 BIN R VALUE (WORKING SET) : 0.2200 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.2600 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2192 REMARK 3 NUCLEIC ACID ATOMS : 1025 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 533 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.58000 REMARK 3 B22 (A**2) : -1.57000 REMARK 3 B33 (A**2) : 0.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.956 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3389 ; 0.006 ; 0.017 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4779 ; 1.093 ; 1.744 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 267 ; 4.248 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;30.422 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 429 ;13.148 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;15.848 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 478 ; 0.071 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2186 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3389 ; 2.638 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 124 ;31.457 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3637 ;14.754 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 232 A 292 REMARK 3 ORIGIN FOR THE GROUP (A): 38.0164 -41.7644 -42.7549 REMARK 3 T TENSOR REMARK 3 T11: 0.0154 T22: 0.0104 REMARK 3 T33: 0.0428 T12: -0.0045 REMARK 3 T13: -0.0065 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.0915 L22: 0.2360 REMARK 3 L33: 0.0515 L12: -0.0558 REMARK 3 L13: -0.0674 L23: 0.0567 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.0134 S13: -0.0091 REMARK 3 S21: -0.0353 S22: -0.0016 S23: -0.0134 REMARK 3 S31: 0.0011 S32: -0.0111 S33: 0.0038 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 41 B 132 REMARK 3 ORIGIN FOR THE GROUP (A): 48.7101 -39.6426 -30.7600 REMARK 3 T TENSOR REMARK 3 T11: 0.0231 T22: 0.0119 REMARK 3 T33: 0.0469 T12: 0.0018 REMARK 3 T13: -0.0060 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.1153 L22: 0.2605 REMARK 3 L33: 0.0768 L12: 0.0073 REMARK 3 L13: -0.0462 L23: -0.0761 REMARK 3 S TENSOR REMARK 3 S11: 0.0074 S12: -0.0021 S13: -0.0197 REMARK 3 S21: 0.0196 S22: -0.0091 S23: -0.0360 REMARK 3 S31: -0.0227 S32: -0.0147 S33: 0.0017 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 47 C 163 REMARK 3 ORIGIN FOR THE GROUP (A): 54.0021 -35.6625 -35.4832 REMARK 3 T TENSOR REMARK 3 T11: 0.0166 T22: 0.0068 REMARK 3 T33: 0.0426 T12: -0.0006 REMARK 3 T13: 0.0046 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 0.1376 L22: 0.2114 REMARK 3 L33: 0.1154 L12: 0.0201 REMARK 3 L13: 0.0185 L23: -0.0606 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: -0.0025 S13: -0.0079 REMARK 3 S21: 0.0074 S22: -0.0068 S23: -0.0601 REMARK 3 S31: -0.0100 S32: -0.0223 S33: 0.0100 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 25 REMARK 3 ORIGIN FOR THE GROUP (A): 33.5699 -30.7684 -31.1856 REMARK 3 T TENSOR REMARK 3 T11: 0.0174 T22: 0.0149 REMARK 3 T33: 0.0262 T12: 0.0025 REMARK 3 T13: -0.0025 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.0787 L22: 0.1922 REMARK 3 L33: 0.4963 L12: -0.0796 REMARK 3 L13: -0.0336 L23: -0.1866 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: -0.0054 S13: -0.0109 REMARK 3 S21: 0.0186 S22: 0.0155 S23: 0.0164 REMARK 3 S31: -0.0486 S32: -0.0213 S33: -0.0276 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 25 REMARK 3 ORIGIN FOR THE GROUP (A): 33.5259 -31.0419 -36.2197 REMARK 3 T TENSOR REMARK 3 T11: 0.0261 T22: 0.0168 REMARK 3 T33: 0.0329 T12: 0.0074 REMARK 3 T13: 0.0059 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.1296 L22: 0.1499 REMARK 3 L33: 0.0189 L12: -0.0327 REMARK 3 L13: 0.0469 L23: -0.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: -0.0161 S13: -0.0019 REMARK 3 S21: -0.0001 S22: 0.0071 S23: 0.0208 REMARK 3 S31: 0.0023 S32: -0.0060 S33: -0.0111 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4G92 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000073891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JAN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : LN2 COOLED FIXED-EXIT. SI(111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54543 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4G91 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 0.2 M (NH4)2SO4, 25% REMARK 280 PEG3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.52000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.94500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.44500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.94500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.52000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.44500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -138.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 230 REMARK 465 GLU A 231 REMARK 465 GLU A 293 REMARK 465 MET C 46 REMARK 465 ARG C 164 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 55 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 DC D 13 C3' - O3' - P ANGL. DEV. = 10.1 DEGREES REMARK 500 DT E 12 O5' - P - OP2 ANGL. DEV. = -7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 237 111.03 -34.47 REMARK 500 LYS A 263 45.42 -97.56 REMARK 500 LYS C 103 -82.76 -98.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1N1J RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE NF-YB/NF-YC HISTONE PAIR REMARK 900 RELATED ID: 4G91 RELATED DB: PDB REMARK 900 CCAAT-BINDING COMPLEX FROM ASPERGILLUS NIDULANS DBREF 4G92 A 231 293 UNP P87249 P87249_EMEND 231 293 DBREF 4G92 B 42 132 UNP Q5B5Z6 Q5B5Z6_EMENI 42 132 DBREF 4G92 C 47 164 UNP Q5AYY8 Q5AYY8_EMENI 47 164 DBREF 4G92 D 1 25 PDB 4G92 4G92 1 25 DBREF 4G92 E 1 25 PDB 4G92 4G92 1 25 SEQADV 4G92 MET A 230 UNP P87249 INITIATING METHIONINE SEQADV 4G92 MET B 41 UNP Q5B5Z6 INITIATING METHIONINE SEQADV 4G92 MET C 46 UNP Q5AYY8 INITIATING METHIONINE SEQRES 1 A 64 MET GLU SER PRO LEU TYR VAL ASN ALA LYS GLN PHE HIS SEQRES 2 A 64 ARG ILE LEU LYS ARG ARG VAL ALA ARG GLN LYS LEU GLU SEQRES 3 A 64 GLU GLN LEU ARG LEU THR SER LYS GLY ARG LYS PRO TYR SEQRES 4 A 64 LEU HIS GLU SER ARG HIS ASN HIS ALA MET ARG ARG PRO SEQRES 5 A 64 ARG GLY PRO GLY GLY ARG PHE LEU THR ALA ASP GLU SEQRES 1 B 92 MET LYS GLU GLN ASP ARG TRP LEU PRO ILE ALA ASN VAL SEQRES 2 B 92 ALA ARG ILE MET LYS LEU ALA LEU PRO GLU ASN ALA LYS SEQRES 3 B 92 ILE ALA LYS GLU ALA LYS GLU CYS MET GLN GLU CYS VAL SEQRES 4 B 92 SER GLU PHE ILE SER PHE ILE THR SER GLU ALA SER GLU SEQRES 5 B 92 LYS CYS GLN GLN GLU LYS ARG LYS THR VAL ASN GLY GLU SEQRES 6 B 92 ASP ILE LEU PHE ALA MET THR SER LEU GLY PHE GLU ASN SEQRES 7 B 92 TYR ALA GLU ALA LEU LYS ILE TYR LEU SER LYS TYR ARG SEQRES 8 B 92 GLU SEQRES 1 C 119 MET GLY THR TRP ALA ASN VAL ASN GLN GLY LEU GLN GLY SEQRES 2 C 119 THR ALA ARG ASP ILE LEU THR THR TYR TRP GLN HIS VAL SEQRES 3 C 119 ILE ASN HIS LEU GLU SER ASP ASN HIS ASP TYR LYS ILE SEQRES 4 C 119 HIS GLN LEU PRO LEU ALA ARG ILE LYS LYS VAL MET LYS SEQRES 5 C 119 ALA ASP PRO GLU VAL LYS MET ILE SER ALA GLU ALA PRO SEQRES 6 C 119 ILE LEU PHE ALA LYS GLY CYS ASP VAL PHE ILE THR GLU SEQRES 7 C 119 LEU THR MET ARG ALA TRP ILE HIS ALA GLU ASP ASN LYS SEQRES 8 C 119 ARG ARG THR LEU GLN ARG SER ASP ILE ALA ALA ALA LEU SEQRES 9 C 119 SER LYS SER ASP MET PHE ASP PHE LEU ILE ASP ILE VAL SEQRES 10 C 119 PRO ARG SEQRES 1 D 25 DT DT DC DA DT DC DC DT DA DC DC DT DC SEQRES 2 D 25 DT DG DA DT DT DG DG DT DC DA DA DT SEQRES 1 E 25 DA DA DA DT DT DG DA DC DC DA DA DT DC SEQRES 2 E 25 DA DG DA DG DG DT DA DG DG DA DT DG HET SO4 B 201 5 HET SO4 C 201 5 HETNAM SO4 SULFATE ION FORMUL 6 SO4 2(O4 S 2-) FORMUL 8 HOH *533(H2 O) HELIX 1 1 GLN A 240 LEU A 258 1 19 HELIX 2 2 HIS A 270 ARG A 280 1 11 HELIX 3 3 LYS B 42 TRP B 47 5 6 HELIX 4 4 PRO B 49 ALA B 60 1 12 HELIX 5 5 ALA B 68 GLU B 97 1 30 HELIX 6 6 ASN B 103 LEU B 114 1 12 HELIX 7 7 PHE B 116 GLU B 132 1 17 HELIX 8 8 TRP C 49 GLN C 54 1 6 HELIX 9 9 GLY C 58 GLU C 76 1 19 HELIX 10 10 PRO C 88 ALA C 98 1 11 HELIX 11 11 ALA C 107 ASN C 135 1 29 HELIX 12 12 GLN C 141 SER C 150 1 10 HELIX 13 13 LYS C 151 ILE C 159 5 9 SHEET 1 A 2 LYS B 66 ILE B 67 0 SHEET 2 A 2 THR C 139 LEU C 140 1 O LEU C 140 N LYS B 66 SHEET 1 B 2 THR B 101 VAL B 102 0 SHEET 2 B 2 MET C 104 ILE C 105 1 O MET C 104 N VAL B 102 SITE 1 AC1 4 ARG B 99 LYS B 100 THR B 101 HOH B 339 SITE 1 AC2 7 ARG C 137 ARG C 138 THR C 139 HOH C 387 SITE 2 AC2 7 HOH C 391 HOH C 406 DT D 25 CRYST1 57.040 72.890 145.890 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017532 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006854 0.00000