HEADER HYDROLASE 25-JUL-12 4GAK TITLE CRYSTAL STRUCTURE OF ACYL-ACP THIOESTERASE FROM SPIROSOMA LINGUALE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-ACP THIOESTERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SPIROSOMA LINGUALE; SOURCE 3 ORGANISM_TAXID: 504472; SOURCE 4 STRAIN: ATCC 33905 / DSM 74 / LMG 10896; SOURCE 5 GENE: SLIN_6353; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PMCSG68 KEYWDS MCSG, PSI-BIOLOGY, STRUCTURAL GENOMICS, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CHANG,R.WU,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 1 19-SEP-12 4GAK 0 JRNL AUTH C.CHANG,R.WU,M.ENDRES,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF ACYL-ACP THIOESTERASE FROM SPIROSOMA JRNL TITL 2 LINGUALE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 24327 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1237 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1409 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2008 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 205 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.82000 REMARK 3 B22 (A**2) : -0.82000 REMARK 3 B33 (A**2) : 1.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.136 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.693 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2105 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2866 ; 1.674 ; 1.940 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 257 ; 6.112 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;30.506 ;23.431 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 350 ;14.918 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.114 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 318 ; 0.105 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1618 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 21 REMARK 3 ORIGIN FOR THE GROUP (A): 15.9602 9.4064 71.7498 REMARK 3 T TENSOR REMARK 3 T11: 0.0445 T22: 0.0729 REMARK 3 T33: 0.0718 T12: 0.0074 REMARK 3 T13: 0.0010 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 0.2124 L22: 0.5834 REMARK 3 L33: 2.7867 L12: 0.3118 REMARK 3 L13: -0.5120 L23: -0.4832 REMARK 3 S TENSOR REMARK 3 S11: 0.0890 S12: 0.0027 S13: 0.0401 REMARK 3 S21: 0.1474 S22: -0.0323 S23: 0.0155 REMARK 3 S31: -0.1723 S32: 0.1324 S33: -0.0568 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 22 A 50 REMARK 3 ORIGIN FOR THE GROUP (A): 9.1106 11.0915 64.4679 REMARK 3 T TENSOR REMARK 3 T11: 0.0650 T22: 0.0602 REMARK 3 T33: 0.0728 T12: -0.0007 REMARK 3 T13: 0.0026 T23: 0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.5443 L22: 0.1647 REMARK 3 L33: 0.1551 L12: -0.0532 REMARK 3 L13: -0.0660 L23: -0.1021 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: 0.0545 S13: 0.0653 REMARK 3 S21: 0.0217 S22: -0.0446 S23: -0.0035 REMARK 3 S31: 0.0400 S32: 0.0143 S33: 0.0026 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 51 A 64 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7726 5.3732 57.6450 REMARK 3 T TENSOR REMARK 3 T11: 0.0567 T22: 0.0704 REMARK 3 T33: 0.0451 T12: 0.0213 REMARK 3 T13: -0.0200 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.2135 L22: 0.6312 REMARK 3 L33: 0.4670 L12: -0.2507 REMARK 3 L13: 0.0268 L23: -0.5222 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: 0.1495 S13: 0.0014 REMARK 3 S21: -0.0244 S22: -0.0172 S23: 0.0052 REMARK 3 S31: 0.0322 S32: -0.0107 S33: 0.0018 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 93 REMARK 3 ORIGIN FOR THE GROUP (A): 16.6033 4.8393 63.1397 REMARK 3 T TENSOR REMARK 3 T11: 0.0324 T22: 0.0689 REMARK 3 T33: 0.0641 T12: -0.0092 REMARK 3 T13: -0.0095 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 0.4076 L22: 0.4121 REMARK 3 L33: 0.8860 L12: -0.3389 REMARK 3 L13: -0.1870 L23: -0.1607 REMARK 3 S TENSOR REMARK 3 S11: 0.0039 S12: 0.0592 S13: 0.0074 REMARK 3 S21: -0.0280 S22: -0.0585 S23: -0.0466 REMARK 3 S31: 0.0694 S32: 0.0116 S33: 0.0546 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 94 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 25.6213 5.3760 69.6540 REMARK 3 T TENSOR REMARK 3 T11: 0.0315 T22: 0.0748 REMARK 3 T33: 0.0798 T12: 0.0185 REMARK 3 T13: -0.0137 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.4643 L22: 0.1987 REMARK 3 L33: 10.8633 L12: 0.3210 REMARK 3 L13: 1.4209 L23: -1.0679 REMARK 3 S TENSOR REMARK 3 S11: -0.2120 S12: -0.0357 S13: 0.3014 REMARK 3 S21: -0.0492 S22: -0.0631 S23: 0.0256 REMARK 3 S31: 0.0380 S32: 0.3933 S33: 0.2751 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2512 2.5147 60.9852 REMARK 3 T TENSOR REMARK 3 T11: 0.0743 T22: 0.0792 REMARK 3 T33: 0.0525 T12: 0.0469 REMARK 3 T13: -0.0006 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.4511 L22: 0.7042 REMARK 3 L33: 0.2465 L12: -0.1215 REMARK 3 L13: -0.2821 L23: 0.2864 REMARK 3 S TENSOR REMARK 3 S11: 0.0221 S12: 0.0513 S13: -0.0103 REMARK 3 S21: -0.0091 S22: -0.0386 S23: 0.0205 REMARK 3 S31: 0.0022 S32: -0.0254 S33: 0.0165 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): -7.5570 9.2020 50.3893 REMARK 3 T TENSOR REMARK 3 T11: 0.0838 T22: 0.1116 REMARK 3 T33: 0.1689 T12: 0.0118 REMARK 3 T13: -0.1035 T23: 0.0527 REMARK 3 L TENSOR REMARK 3 L11: 9.9365 L22: 7.4935 REMARK 3 L33: 2.8226 L12: 2.3227 REMARK 3 L13: 4.2519 L23: -1.6465 REMARK 3 S TENSOR REMARK 3 S11: 0.5057 S12: -0.3424 S13: -0.8648 REMARK 3 S21: -0.3603 S22: 0.1740 S23: 0.6023 REMARK 3 S31: 0.4017 S32: -0.2415 S33: -0.6797 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 136 REMARK 3 ORIGIN FOR THE GROUP (A): 10.2890 12.6582 48.6222 REMARK 3 T TENSOR REMARK 3 T11: 0.1077 T22: 0.1492 REMARK 3 T33: 0.0232 T12: 0.0053 REMARK 3 T13: 0.0238 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 3.8736 L22: 0.2799 REMARK 3 L33: 0.1627 L12: 0.1719 REMARK 3 L13: -0.7795 L23: -0.0639 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: 0.4826 S13: 0.0337 REMARK 3 S21: -0.1520 S22: -0.0468 S23: -0.0623 REMARK 3 S31: 0.0004 S32: -0.0758 S33: 0.0040 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 137 A 146 REMARK 3 ORIGIN FOR THE GROUP (A): 15.6759 -3.0461 53.5568 REMARK 3 T TENSOR REMARK 3 T11: 0.1918 T22: 0.0818 REMARK 3 T33: 0.0852 T12: 0.0902 REMARK 3 T13: 0.0837 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 3.6171 L22: 5.9378 REMARK 3 L33: 0.7228 L12: 3.4004 REMARK 3 L13: 1.3740 L23: 1.5816 REMARK 3 S TENSOR REMARK 3 S11: 0.0105 S12: 0.2555 S13: -0.2002 REMARK 3 S21: -0.1505 S22: -0.0435 S23: -0.0470 REMARK 3 S31: 0.1625 S32: 0.1354 S33: 0.0331 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 147 A 165 REMARK 3 ORIGIN FOR THE GROUP (A): -2.2614 -11.4234 65.2607 REMARK 3 T TENSOR REMARK 3 T11: 0.0441 T22: 0.2014 REMARK 3 T33: 0.1292 T12: -0.0757 REMARK 3 T13: -0.0140 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 1.4458 L22: 2.5090 REMARK 3 L33: 0.7459 L12: -0.6869 REMARK 3 L13: -0.3077 L23: -0.2036 REMARK 3 S TENSOR REMARK 3 S11: 0.0382 S12: 0.1933 S13: -0.2845 REMARK 3 S21: -0.1218 S22: 0.0246 S23: 0.1992 REMARK 3 S31: 0.1438 S32: -0.3816 S33: -0.0629 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 166 A 187 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2419 0.9197 69.9103 REMARK 3 T TENSOR REMARK 3 T11: 0.0542 T22: 0.0685 REMARK 3 T33: 0.0453 T12: -0.0203 REMARK 3 T13: -0.0250 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.7583 L22: 3.9124 REMARK 3 L33: 0.2429 L12: -0.8487 REMARK 3 L13: -0.0078 L23: -0.8360 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: 0.0346 S13: -0.0751 REMARK 3 S21: -0.0352 S22: -0.0101 S23: 0.0691 REMARK 3 S31: 0.0115 S32: -0.0196 S33: 0.0000 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 188 A 206 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5560 -10.6777 69.3720 REMARK 3 T TENSOR REMARK 3 T11: 0.0534 T22: 0.0156 REMARK 3 T33: 0.1193 T12: 0.0123 REMARK 3 T13: 0.0010 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 0.1331 L22: 1.1388 REMARK 3 L33: 1.3126 L12: 0.3845 REMARK 3 L13: 0.2352 L23: 0.5527 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: 0.0138 S13: -0.0468 REMARK 3 S21: -0.0579 S22: 0.0389 S23: -0.1125 REMARK 3 S31: 0.1258 S32: -0.0036 S33: -0.0252 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 207 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): -10.1349 2.1414 66.7911 REMARK 3 T TENSOR REMARK 3 T11: 0.0531 T22: 0.0489 REMARK 3 T33: 0.0757 T12: -0.0338 REMARK 3 T13: -0.0091 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.6704 L22: 8.6462 REMARK 3 L33: 16.3077 L12: -1.1673 REMARK 3 L13: -2.6334 L23: -1.6907 REMARK 3 S TENSOR REMARK 3 S11: 0.1195 S12: 0.0210 S13: -0.0095 REMARK 3 S21: -0.2794 S22: 0.1972 S23: 0.3986 REMARK 3 S31: -0.3431 S32: -0.3163 S33: -0.3167 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 212 A 233 REMARK 3 ORIGIN FOR THE GROUP (A): 0.8388 -13.5054 66.1678 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: 0.0376 REMARK 3 T33: 0.1299 T12: -0.0473 REMARK 3 T13: -0.0071 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 1.9643 L22: 1.8145 REMARK 3 L33: 0.1848 L12: -0.2412 REMARK 3 L13: -0.4934 L23: -0.2274 REMARK 3 S TENSOR REMARK 3 S11: -0.1260 S12: 0.1822 S13: -0.2354 REMARK 3 S21: 0.0308 S22: 0.0724 S23: 0.0857 REMARK 3 S31: 0.0765 S32: -0.0736 S33: 0.0536 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 234 A 247 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0821 -10.4150 63.8874 REMARK 3 T TENSOR REMARK 3 T11: 0.1552 T22: 0.0246 REMARK 3 T33: 0.1508 T12: -0.0206 REMARK 3 T13: 0.0380 T23: -0.0367 REMARK 3 L TENSOR REMARK 3 L11: 5.2178 L22: 0.1784 REMARK 3 L33: 1.1265 L12: 0.0886 REMARK 3 L13: 1.1598 L23: 0.1166 REMARK 3 S TENSOR REMARK 3 S11: -0.2055 S12: 0.1549 S13: -0.0628 REMARK 3 S21: -0.0327 S22: -0.0417 S23: 0.0058 REMARK 3 S31: 0.2247 S32: -0.0699 S33: 0.2471 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4GAK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JUL-12. REMARK 100 THE RCSB ID CODE IS RCSB073945. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI(111) DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24494 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.000 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.61900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE, DM, SHELXDE, ARP/WARP, RESOLVE, REMARK 200 COOT REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 1.26M AMMONIUM SULFATE, PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.97250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.82850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.82850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.98625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.82850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.82850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.95875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.82850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.82850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.98625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.82850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.82850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 116.95875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.97250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 155.94500 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 211 CG HIS A 211 CD2 0.058 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 247 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 247 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 85 -164.46 -126.65 REMARK 500 ASP A 99 -31.29 -39.43 REMARK 500 ARG A 205 -97.61 -114.78 REMARK 500 HIS A 211 -6.83 81.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC103790 RELATED DB: TARGETTRACK DBREF 4GAK A 1 247 UNP D2QU30 D2QU30_SPILD 1 247 SEQADV 4GAK SER A -2 UNP D2QU30 EXPRESSION TAG SEQADV 4GAK ASN A -1 UNP D2QU30 EXPRESSION TAG SEQADV 4GAK ALA A 0 UNP D2QU30 EXPRESSION TAG SEQRES 1 A 250 SER ASN ALA MSE ALA PHE ILE GLN THR ASP THR PHE THR SEQRES 2 A 250 LEU ARG GLY TYR GLU CYS ASP ALA PHE GLY ARG MSE SER SEQRES 3 A 250 ILE PRO ALA LEU MSE ASN LEU MSE GLN GLU SER ALA ASN SEQRES 4 A 250 ARG ASN ALA ILE ASP TYR GLY ILE GLY ILE ALA ASP LEU SEQRES 5 A 250 ALA GLN LYS GLY VAL GLY TRP MSE LEU MSE ARG PHE CYS SEQRES 6 A 250 LEU ARG ILE HIS GLN TYR PRO ARG TYR GLY ASP THR ILE SEQRES 7 A 250 GLN LEU MSE THR TYR PRO THR THR VAL ASP LYS TYR PHE SEQRES 8 A 250 ILE HIS ARG ASP PHE ARG VAL LEU ALA THR ASP GLY THR SEQRES 9 A 250 LEU LEU ALA ASP ALA ARG SER THR TRP LEU VAL PHE SER SEQRES 10 A 250 MSE GLU LYS ARG SER MSE VAL PRO LEU PRO ASP PHE ILE SEQRES 11 A 250 ARG GLN LEU SER PRO PRO ALA ASN VAL ASP PRO LEU PRO SEQRES 12 A 250 ALA LEU PRO LEU LYS PRO ASP PHE GLN THR ALA SER PHE SEQRES 13 A 250 ALA THR ALA ALA SER LYS SER VAL GLN VAL GLY TRP LEU SEQRES 14 A 250 ASN ILE ASP GLN ASN GLN HIS VAL ASN ASN VAL ALA TYR SEQRES 15 A 250 VAL GLN TRP LEU LEU GLU GLY VAL ASP SER GLU ILE VAL SEQRES 16 A 250 GLN THR ARG GLU ILE ALA GLU ILE ASP LEU VAL TYR ARG SEQRES 17 A 250 THR GLU SER HIS TRP HIS ASP TRP LEU SER VAL GLN SER SEQRES 18 A 250 VAL THR GLU THR ASP ASN SER VAL LEU HIS ARG ILE SER SEQRES 19 A 250 GLN THR GLU SER GLY LYS ASP VAL LEU LEU ALA ARG SER SEQRES 20 A 250 ARG TRP ARG MODRES 4GAK MSE A 1 MET SELENOMETHIONINE MODRES 4GAK MSE A 22 MET SELENOMETHIONINE MODRES 4GAK MSE A 28 MET SELENOMETHIONINE MODRES 4GAK MSE A 31 MET SELENOMETHIONINE MODRES 4GAK MSE A 57 MET SELENOMETHIONINE MODRES 4GAK MSE A 59 MET SELENOMETHIONINE MODRES 4GAK MSE A 78 MET SELENOMETHIONINE MODRES 4GAK MSE A 115 MET SELENOMETHIONINE MODRES 4GAK MSE A 120 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 22 8 HET MSE A 28 8 HET MSE A 31 8 HET MSE A 57 16 HET MSE A 59 16 HET MSE A 78 8 HET MSE A 115 8 HET MSE A 120 8 HET GOL A 301 6 HET GOL A 302 6 HET CL A 303 1 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 CL CL 1- FORMUL 5 HOH *205(H2 O) HELIX 1 1 ARG A 12 CYS A 16 5 5 HELIX 2 2 SER A 23 TYR A 42 1 20 HELIX 3 3 GLY A 45 GLN A 51 1 7 HELIX 4 4 PRO A 124 GLN A 129 1 6 HELIX 5 5 PRO A 146 ALA A 151 5 6 HELIX 6 6 GLY A 164 ILE A 168 5 5 HELIX 7 7 ASN A 175 GLY A 186 1 12 HELIX 8 8 ASP A 188 ARG A 195 1 8 SHEET 1 A 5 GLN A 5 THR A 10 0 SHEET 2 A 5 THR A 74 VAL A 84 -1 O ILE A 75 N PHE A 9 SHEET 3 A 5 PHE A 88 ALA A 97 -1 O ARG A 94 N MSE A 78 SHEET 4 A 5 LEU A 102 SER A 114 -1 O TRP A 110 N ILE A 89 SHEET 5 A 5 SER A 119 VAL A 121 -1 O SER A 119 N SER A 114 SHEET 1 B10 GLN A 5 THR A 10 0 SHEET 2 B10 THR A 74 VAL A 84 -1 O ILE A 75 N PHE A 9 SHEET 3 B10 PHE A 88 ALA A 97 -1 O ARG A 94 N MSE A 78 SHEET 4 B10 LEU A 102 SER A 114 -1 O TRP A 110 N ILE A 89 SHEET 5 B10 VAL A 54 ILE A 65 -1 N ARG A 64 O ASP A 105 SHEET 6 B10 ILE A 197 TYR A 204 -1 O LEU A 202 N PHE A 61 SHEET 7 B10 ASP A 238 TRP A 246 -1 O ARG A 245 N ALA A 198 SHEET 8 B10 SER A 225 GLN A 232 -1 N ILE A 230 O VAL A 239 SHEET 9 B10 TRP A 213 THR A 222 -1 N GLN A 217 O ARG A 229 SHEET 10 B10 LYS A 159 GLN A 162 -1 N VAL A 161 O LEU A 214 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ALA A 2 1555 1555 1.33 LINK C AARG A 21 N MSE A 22 1555 1555 1.33 LINK C BARG A 21 N MSE A 22 1555 1555 1.34 LINK C MSE A 22 N SER A 23 1555 1555 1.34 LINK C LEU A 27 N MSE A 28 1555 1555 1.32 LINK C MSE A 28 N ASN A 29 1555 1555 1.32 LINK C LEU A 30 N MSE A 31 1555 1555 1.33 LINK C MSE A 31 N GLN A 32 1555 1555 1.34 LINK C TRP A 56 N AMSE A 57 1555 1555 1.33 LINK C TRP A 56 N BMSE A 57 1555 1555 1.33 LINK C AMSE A 57 N LEU A 58 1555 1555 1.33 LINK C BMSE A 57 N LEU A 58 1555 1555 1.33 LINK C LEU A 58 N AMSE A 59 1555 1555 1.33 LINK C LEU A 58 N BMSE A 59 1555 1555 1.33 LINK C AMSE A 59 N ARG A 60 1555 1555 1.33 LINK C BMSE A 59 N ARG A 60 1555 1555 1.33 LINK C LEU A 77 N MSE A 78 1555 1555 1.35 LINK C MSE A 78 N THR A 79 1555 1555 1.32 LINK C SER A 114 N MSE A 115 1555 1555 1.33 LINK C MSE A 115 N GLU A 116 1555 1555 1.33 LINK C SER A 119 N MSE A 120 1555 1555 1.33 LINK C MSE A 120 N VAL A 121 1555 1555 1.33 SITE 1 AC1 5 PHE A 9 THR A 10 ARG A 12 HOH A 502 SITE 2 AC1 5 HOH A 553 SITE 1 AC2 6 ALA A 35 ASN A 36 ALA A 39 TRP A 56 SITE 2 AC2 6 ARG A 91 HOH A 433 SITE 1 AC3 2 ASP A 147 ARG A 243 CRYST1 61.657 61.657 155.945 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016219 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016219 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006413 0.00000