data_4GGM # _entry.id 4GGM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4GGM RCSB RCSB074157 WWPDB D_1000074157 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4GGI 'D225A mutant' unspecified TargetTrack CSMP-166 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GGM _pdbx_database_status.recvd_initial_deposition_date 2012-08-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Metzger IV, L.E.' 1 'Lee, J.K.' 2 'Finer-Moore, J.S.' 3 'Raetz, C.R.H.' 4 'Stroud, R.M.' 5 'Center for Structures of Membrane Proteins (CSMP)' 6 # _citation.id primary _citation.title 'LpxI structures reveal how a lipid A precursor is synthesized.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 19 _citation.page_first 1132 _citation.page_last 1138 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23042606 _citation.pdbx_database_id_DOI 10.1038/nsmb.2393 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Metzger, L.E.' 1 primary 'Lee, J.K.' 2 primary 'Finer-Moore, J.S.' 3 primary 'Raetz, C.R.' 4 primary 'Stroud, R.M.' 5 # _cell.entry_id 4GGM _cell.length_a 74.286 _cell.length_b 74.286 _cell.length_c 364.644 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GGM _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UDP-2,3-diacylglucosamine pyrophosphatase LpxI' 30376.908 1 3.6.1.54 ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn ;(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE ; 711.861 1 ? ? ? ? 4 water nat water 18.015 7 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)(MSE)RKLGLIAGGGALPVELASHCEAAGRAFAV(MSE)RLRSFADPSLDRYPGADVGIGEFGKIFKALRAEG CDVVCFAGNVSRPDFSAL(MSE)PDARGLKVLPSLIVAARKGDDALLRRVLDEFEKEGFEIEGAHEV(MSE)GE(MSE)T LPRGRLGKVSPAPEH(MSE)ADIDKALDVAREIGRLDIGQGAVVCEGLVLAVEAQEGTDA(MSE)LRRVADLPEAIRGRA ERRLGVLAKAPKPIQETRVDLPTIGVATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDLGLFVLGVDPQERP ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMMRKLGLIAGGGALPVELASHCEAAGRAFAVMRLRSFADPSLDRYPGADVGIGEFGKIFKALRAEGCDVVCFAGNVSR PDFSALMPDARGLKVLPSLIVAARKGDDALLRRVLDEFEKEGFEIEGAHEVMGEMTLPRGRLGKVSPAPEHMADIDKALD VAREIGRLDIGQGAVVCEGLVLAVEAQEGTDAMLRRVADLPEAIRGRAERRLGVLAKAPKPIQETRVDLPTIGVATIHRA ARAGLAGIVGEAGRLLVVDREAVIAAADDLGLFVLGVDPQERP ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier CSMP-166 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 MSE n 1 5 ARG n 1 6 LYS n 1 7 LEU n 1 8 GLY n 1 9 LEU n 1 10 ILE n 1 11 ALA n 1 12 GLY n 1 13 GLY n 1 14 GLY n 1 15 ALA n 1 16 LEU n 1 17 PRO n 1 18 VAL n 1 19 GLU n 1 20 LEU n 1 21 ALA n 1 22 SER n 1 23 HIS n 1 24 CYS n 1 25 GLU n 1 26 ALA n 1 27 ALA n 1 28 GLY n 1 29 ARG n 1 30 ALA n 1 31 PHE n 1 32 ALA n 1 33 VAL n 1 34 MSE n 1 35 ARG n 1 36 LEU n 1 37 ARG n 1 38 SER n 1 39 PHE n 1 40 ALA n 1 41 ASP n 1 42 PRO n 1 43 SER n 1 44 LEU n 1 45 ASP n 1 46 ARG n 1 47 TYR n 1 48 PRO n 1 49 GLY n 1 50 ALA n 1 51 ASP n 1 52 VAL n 1 53 GLY n 1 54 ILE n 1 55 GLY n 1 56 GLU n 1 57 PHE n 1 58 GLY n 1 59 LYS n 1 60 ILE n 1 61 PHE n 1 62 LYS n 1 63 ALA n 1 64 LEU n 1 65 ARG n 1 66 ALA n 1 67 GLU n 1 68 GLY n 1 69 CYS n 1 70 ASP n 1 71 VAL n 1 72 VAL n 1 73 CYS n 1 74 PHE n 1 75 ALA n 1 76 GLY n 1 77 ASN n 1 78 VAL n 1 79 SER n 1 80 ARG n 1 81 PRO n 1 82 ASP n 1 83 PHE n 1 84 SER n 1 85 ALA n 1 86 LEU n 1 87 MSE n 1 88 PRO n 1 89 ASP n 1 90 ALA n 1 91 ARG n 1 92 GLY n 1 93 LEU n 1 94 LYS n 1 95 VAL n 1 96 LEU n 1 97 PRO n 1 98 SER n 1 99 LEU n 1 100 ILE n 1 101 VAL n 1 102 ALA n 1 103 ALA n 1 104 ARG n 1 105 LYS n 1 106 GLY n 1 107 ASP n 1 108 ASP n 1 109 ALA n 1 110 LEU n 1 111 LEU n 1 112 ARG n 1 113 ARG n 1 114 VAL n 1 115 LEU n 1 116 ASP n 1 117 GLU n 1 118 PHE n 1 119 GLU n 1 120 LYS n 1 121 GLU n 1 122 GLY n 1 123 PHE n 1 124 GLU n 1 125 ILE n 1 126 GLU n 1 127 GLY n 1 128 ALA n 1 129 HIS n 1 130 GLU n 1 131 VAL n 1 132 MSE n 1 133 GLY n 1 134 GLU n 1 135 MSE n 1 136 THR n 1 137 LEU n 1 138 PRO n 1 139 ARG n 1 140 GLY n 1 141 ARG n 1 142 LEU n 1 143 GLY n 1 144 LYS n 1 145 VAL n 1 146 SER n 1 147 PRO n 1 148 ALA n 1 149 PRO n 1 150 GLU n 1 151 HIS n 1 152 MSE n 1 153 ALA n 1 154 ASP n 1 155 ILE n 1 156 ASP n 1 157 LYS n 1 158 ALA n 1 159 LEU n 1 160 ASP n 1 161 VAL n 1 162 ALA n 1 163 ARG n 1 164 GLU n 1 165 ILE n 1 166 GLY n 1 167 ARG n 1 168 LEU n 1 169 ASP n 1 170 ILE n 1 171 GLY n 1 172 GLN n 1 173 GLY n 1 174 ALA n 1 175 VAL n 1 176 VAL n 1 177 CYS n 1 178 GLU n 1 179 GLY n 1 180 LEU n 1 181 VAL n 1 182 LEU n 1 183 ALA n 1 184 VAL n 1 185 GLU n 1 186 ALA n 1 187 GLN n 1 188 GLU n 1 189 GLY n 1 190 THR n 1 191 ASP n 1 192 ALA n 1 193 MSE n 1 194 LEU n 1 195 ARG n 1 196 ARG n 1 197 VAL n 1 198 ALA n 1 199 ASP n 1 200 LEU n 1 201 PRO n 1 202 GLU n 1 203 ALA n 1 204 ILE n 1 205 ARG n 1 206 GLY n 1 207 ARG n 1 208 ALA n 1 209 GLU n 1 210 ARG n 1 211 ARG n 1 212 LEU n 1 213 GLY n 1 214 VAL n 1 215 LEU n 1 216 ALA n 1 217 LYS n 1 218 ALA n 1 219 PRO n 1 220 LYS n 1 221 PRO n 1 222 ILE n 1 223 GLN n 1 224 GLU n 1 225 THR n 1 226 ARG n 1 227 VAL n 1 228 ASP n 1 229 LEU n 1 230 PRO n 1 231 THR n 1 232 ILE n 1 233 GLY n 1 234 VAL n 1 235 ALA n 1 236 THR n 1 237 ILE n 1 238 HIS n 1 239 ARG n 1 240 ALA n 1 241 ALA n 1 242 ARG n 1 243 ALA n 1 244 GLY n 1 245 LEU n 1 246 ALA n 1 247 GLY n 1 248 ILE n 1 249 VAL n 1 250 GLY n 1 251 GLU n 1 252 ALA n 1 253 GLY n 1 254 ARG n 1 255 LEU n 1 256 LEU n 1 257 VAL n 1 258 VAL n 1 259 ASP n 1 260 ARG n 1 261 GLU n 1 262 ALA n 1 263 VAL n 1 264 ILE n 1 265 ALA n 1 266 ALA n 1 267 ALA n 1 268 ASP n 1 269 ASP n 1 270 LEU n 1 271 GLY n 1 272 LEU n 1 273 PHE n 1 274 VAL n 1 275 LEU n 1 276 GLY n 1 277 VAL n 1 278 ASP n 1 279 PRO n 1 280 GLN n 1 281 GLU n 1 282 ARG n 1 283 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene '7330127, CCNA_01987, lpxI' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NA1000 / CB15N' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caulobacter crescentus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 565050 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'C41(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B8GWR0_CAUCN _struct_ref.pdbx_db_accession B8GWR0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRKLGLIAGGGALPVELASHCEAAGRAFAVMRLRSFADPSLDRYPGADVGIGEFGKIFKALRAEGCDVVCFAGNVSRPDF SALMPDARGLKVLPSLIVAARKGDDALLRRVLDEFEKEGFEIEGAHEVMGEMTLPRGRLGKVSPAPEHMADIDKALDVAR EIGRLDIGQGAVVCEGLVLAVEAQEGTDAMLRRVADLPEAIRGRAERRLGVLAKAPKPIQETRVDLPTIGVATIHRAARA GLAGIVGEAGRLLVVDREAVIAAADDLGLFVLGVDPQERP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4GGM _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 283 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B8GWR0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 280 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 280 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4GGM GLY X 1 ? UNP B8GWR0 ? ? 'EXPRESSION TAG' -2 1 1 4GGM HIS X 2 ? UNP B8GWR0 ? ? 'EXPRESSION TAG' -1 2 1 4GGM MSE X 3 ? UNP B8GWR0 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LP5 non-polymer . ;(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE ; ? 'C34 H66 N O12 P' 711.861 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GGM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.14 _exptl_crystal.density_percent_sol 70.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 mM MES pH 5.7, 3-7% w/v PEG 6000, 2.5% v/v glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2009-10-16 _diffrn_detector.details 'Double Crystals Si111' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator DoubleCrystalSi111 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.11 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4GGM _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 45 _reflns.d_resolution_high 2.9 _reflns.number_obs 11932 _reflns.number_all 11975 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.8971 _reflns_shell.d_res_low 3.1886 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4GGM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11932 _refine.ls_number_reflns_all 11975 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.513 _refine.ls_d_res_high 2.897 _refine.ls_percent_reflns_obs 99.64 _refine.ls_R_factor_obs 0.2186 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2159 _refine.ls_R_factor_R_free 0.2716 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.79 _refine.ls_number_reflns_R_free 571 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 15.6372 _refine.aniso_B[2][2] 15.6372 _refine.aniso_B[3][3] -31.2744 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.333 _refine.solvent_model_param_bsol 58.217 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.41 _refine.pdbx_overall_phase_error 32.06 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2044 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 49 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 2100 _refine_hist.d_res_high 2.897 _refine_hist.d_res_low 45.513 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.008 ? ? 2167 'X-RAY DIFFRACTION' ? f_angle_d 1.312 ? ? 2915 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 19.062 ? ? 854 'X-RAY DIFFRACTION' ? f_chiral_restr 0.079 ? ? 335 'X-RAY DIFFRACTION' ? f_plane_restr 0.005 ? ? 379 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.8971 3.1886 2760 0.3300 100.00 0.4480 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.1886 3.6498 2771 0.2599 100.00 0.3176 . . 149 . . . . 'X-RAY DIFFRACTION' . 3.6498 4.5976 2822 0.1839 100.00 0.2670 . . 146 . . . . 'X-RAY DIFFRACTION' . 4.5976 45.5187 3008 0.1996 99.00 0.2269 . . 138 . . . . # _struct.entry_id 4GGM _struct.title 'Structure of LpxI' _struct.pdbx_descriptor 'UDP-2,3-diacylglucosamine pyrophosphatase LpxI' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GGM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Structural Genomics, PSI-Biology, Protein Structure Initiative, Center for Structures of Membrane Proteins, CSMP, lipid binding, HYDROLASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ;Biochemical, analytical, and mass spec data suggests dimer, which is noted in the manuscript, but it can also be monomer based on crystallographic results. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 15 ? ALA A 27 ? ALA X 12 ALA X 24 1 ? 13 HELX_P HELX_P2 2 ASP A 41 ? ASP A 45 ? ASP X 38 ASP X 42 5 ? 5 HELX_P HELX_P3 3 GLU A 56 ? GLU A 67 ? GLU X 53 GLU X 64 1 ? 12 HELX_P HELX_P4 4 VAL A 95 ? ARG A 104 ? VAL X 92 ARG X 101 1 ? 10 HELX_P HELX_P5 5 GLY A 106 ? GLY A 122 ? GLY X 103 GLY X 119 1 ? 17 HELX_P HELX_P6 6 GLY A 127 ? GLU A 134 ? GLY X 124 GLU X 131 1 ? 8 HELX_P HELX_P7 7 ALA A 148 ? LEU A 168 ? ALA X 145 LEU X 165 1 ? 21 HELX_P HELX_P8 8 GLY A 189 ? ASP A 199 ? GLY X 186 ASP X 196 1 ? 11 HELX_P HELX_P9 9 PRO A 201 ? ARG A 205 ? PRO X 198 ARG X 202 5 ? 5 HELX_P HELX_P10 10 GLY A 233 ? ALA A 243 ? GLY X 230 ALA X 240 1 ? 11 HELX_P HELX_P11 11 ASP A 259 ? GLY A 271 ? ASP X 256 GLY X 268 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 4 C ? ? ? 1_555 A ARG 5 N ? ? X MSE 1 X ARG 2 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? A VAL 33 C ? ? ? 1_555 A MSE 34 N ? ? X VAL 30 X MSE 31 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A MSE 34 C ? ? ? 1_555 A ARG 35 N ? ? X MSE 31 X ARG 32 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A VAL 131 C ? ? ? 1_555 A MSE 132 N ? ? X VAL 128 X MSE 129 1_555 ? ? ? ? ? ? ? 1.326 ? covale5 covale ? ? A MSE 132 C ? ? ? 1_555 A GLY 133 N ? ? X MSE 129 X GLY 130 1_555 ? ? ? ? ? ? ? 1.329 ? covale6 covale ? ? A GLU 134 C ? ? ? 1_555 A MSE 135 N ? ? X GLU 131 X MSE 132 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? A MSE 135 C ? ? ? 1_555 A THR 136 N ? ? X MSE 132 X THR 133 1_555 ? ? ? ? ? ? ? 1.321 ? covale8 covale ? ? A HIS 151 C ? ? ? 1_555 A MSE 152 N ? ? X HIS 148 X MSE 149 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? A MSE 152 C ? ? ? 1_555 A ALA 153 N ? ? X MSE 149 X ALA 150 1_555 ? ? ? ? ? ? ? 1.332 ? covale10 covale ? ? A ALA 192 C ? ? ? 1_555 A MSE 193 N ? ? X ALA 189 X MSE 190 1_555 ? ? ? ? ? ? ? 1.334 ? covale11 covale ? ? A MSE 193 C ? ? ? 1_555 A LEU 194 N ? ? X MSE 190 X LEU 191 1_555 ? ? ? ? ? ? ? 1.330 ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? X MG 301 X HOH 405 1_555 ? ? ? ? ? ? ? 2.662 ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? X MG 301 X HOH 404 1_555 ? ? ? ? ? ? ? 2.699 ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 D HOH . O ? ? X MG 301 X HOH 407 1_555 ? ? ? ? ? ? ? 2.754 ? covale12 covale ? ? A LEU 86 C ? ? ? 1_555 A MSE 87 N ? ? X LEU 83 X MSE 84 1_555 ? ? ? ? ? ? ? 1.331 ? covale13 covale ? ? A MSE 87 C ? ? ? 1_555 A PRO 88 N ? ? X MSE 84 X PRO 85 1_555 ? ? ? ? ? ? ? 1.344 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ILE 54 A . ? ILE 51 X GLY 55 A ? GLY 52 X 1 -2.38 2 ARG 91 A . ? ARG 88 X GLY 92 A ? GLY 89 X 1 21.92 3 GLU 121 A . ? GLU 118 X GLY 122 A ? GLY 119 X 1 16.80 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 6 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 49 ? VAL A 52 ? GLY X 46 VAL X 49 A 2 PHE A 31 ? LEU A 36 ? PHE X 28 LEU X 33 A 3 LEU A 7 ? ALA A 11 ? LEU X 4 ALA X 8 A 4 VAL A 71 ? ALA A 75 ? VAL X 68 ALA X 72 A 5 GLU A 124 ? GLU A 126 ? GLU X 121 GLU X 123 B 1 GLY A 140 ? ARG A 141 ? GLY X 137 ARG X 138 B 2 PHE A 273 ? VAL A 277 ? PHE X 270 VAL X 274 B 3 GLY A 247 ? GLU A 251 ? GLY X 244 GLU X 248 B 4 VAL A 214 ? LYS A 217 ? VAL X 211 LYS X 214 B 5 GLY A 173 ? CYS A 177 ? GLY X 170 CYS X 174 B 6 LEU A 180 ? VAL A 184 ? LEU X 177 VAL X 181 C 1 THR A 231 ? ILE A 232 ? THR X 228 ILE X 229 C 2 LEU A 256 ? VAL A 257 ? LEU X 253 VAL X 254 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 50 ? O ALA X 47 N ARG A 35 ? N ARG X 32 A 2 3 O MSE A 34 ? O MSE X 31 N LEU A 9 ? N LEU X 6 A 3 4 N ILE A 10 ? N ILE X 7 O CYS A 73 ? O CYS X 70 A 4 5 N VAL A 72 ? N VAL X 69 O GLU A 126 ? O GLU X 123 B 1 2 N GLY A 140 ? N GLY X 137 O GLY A 276 ? O GLY X 273 B 2 3 O LEU A 275 ? O LEU X 272 N ILE A 248 ? N ILE X 245 B 3 4 O VAL A 249 ? O VAL X 246 N LEU A 215 ? N LEU X 212 B 4 5 O VAL A 214 ? O VAL X 211 N VAL A 176 ? N VAL X 173 B 5 6 N VAL A 175 ? N VAL X 172 O LEU A 182 ? O LEU X 179 C 1 2 N ILE A 232 ? N ILE X 229 O LEU A 256 ? O LEU X 253 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG X 301' AC2 Software ? ? ? ? 14 'BINDING SITE FOR RESIDUE LP5 X 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 127 ? GLY X 124 . ? 1_555 ? 2 AC1 4 HOH D . ? HOH X 404 . ? 1_555 ? 3 AC1 4 HOH D . ? HOH X 405 . ? 1_555 ? 4 AC1 4 HOH D . ? HOH X 407 . ? 1_555 ? 5 AC2 14 GLY A 53 ? GLY X 50 . ? 1_555 ? 6 AC2 14 ILE A 54 ? ILE X 51 . ? 1_555 ? 7 AC2 14 GLU A 56 ? GLU X 53 . ? 1_555 ? 8 AC2 14 PHE A 74 ? PHE X 71 . ? 1_555 ? 9 AC2 14 GLY A 76 ? GLY X 73 . ? 1_555 ? 10 AC2 14 VAL A 78 ? VAL X 75 . ? 1_555 ? 11 AC2 14 SER A 79 ? SER X 76 . ? 1_555 ? 12 AC2 14 ARG A 80 ? ARG X 77 . ? 1_555 ? 13 AC2 14 LEU A 99 ? LEU X 96 . ? 1_555 ? 14 AC2 14 ASP A 108 ? ASP X 105 . ? 1_555 ? 15 AC2 14 LEU A 111 ? LEU X 108 . ? 1_555 ? 16 AC2 14 VAL A 114 ? VAL X 111 . ? 1_555 ? 17 AC2 14 HOH D . ? HOH X 402 . ? 1_555 ? 18 AC2 14 HOH D . ? HOH X 404 . ? 1_555 ? # _database_PDB_matrix.entry_id 4GGM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GGM _atom_sites.fract_transf_matrix[1][1] 0.013461 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013461 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.002742 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? X . n A 1 2 HIS 2 -1 ? ? ? X . n A 1 3 MSE 3 0 ? ? ? X . n A 1 4 MSE 4 1 1 MSE MSE X . n A 1 5 ARG 5 2 2 ARG ARG X . n A 1 6 LYS 6 3 3 LYS LYS X . n A 1 7 LEU 7 4 4 LEU LEU X . n A 1 8 GLY 8 5 5 GLY GLY X . n A 1 9 LEU 9 6 6 LEU LEU X . n A 1 10 ILE 10 7 7 ILE ILE X . n A 1 11 ALA 11 8 8 ALA ALA X . n A 1 12 GLY 12 9 9 GLY GLY X . n A 1 13 GLY 13 10 10 GLY GLY X . n A 1 14 GLY 14 11 11 GLY GLY X . n A 1 15 ALA 15 12 12 ALA ALA X . n A 1 16 LEU 16 13 13 LEU LEU X . n A 1 17 PRO 17 14 14 PRO PRO X . n A 1 18 VAL 18 15 15 VAL VAL X . n A 1 19 GLU 19 16 16 GLU GLU X . n A 1 20 LEU 20 17 17 LEU LEU X . n A 1 21 ALA 21 18 18 ALA ALA X . n A 1 22 SER 22 19 19 SER SER X . n A 1 23 HIS 23 20 20 HIS HIS X . n A 1 24 CYS 24 21 21 CYS CYS X . n A 1 25 GLU 25 22 22 GLU GLU X . n A 1 26 ALA 26 23 23 ALA ALA X . n A 1 27 ALA 27 24 24 ALA ALA X . n A 1 28 GLY 28 25 25 GLY GLY X . n A 1 29 ARG 29 26 26 ARG ARG X . n A 1 30 ALA 30 27 27 ALA ALA X . n A 1 31 PHE 31 28 28 PHE PHE X . n A 1 32 ALA 32 29 29 ALA ALA X . n A 1 33 VAL 33 30 30 VAL VAL X . n A 1 34 MSE 34 31 31 MSE MSE X . n A 1 35 ARG 35 32 32 ARG ARG X . n A 1 36 LEU 36 33 33 LEU LEU X . n A 1 37 ARG 37 34 34 ARG ARG X . n A 1 38 SER 38 35 35 SER SER X . n A 1 39 PHE 39 36 36 PHE PHE X . n A 1 40 ALA 40 37 37 ALA ALA X . n A 1 41 ASP 41 38 38 ASP ASP X . n A 1 42 PRO 42 39 39 PRO PRO X . n A 1 43 SER 43 40 40 SER SER X . n A 1 44 LEU 44 41 41 LEU LEU X . n A 1 45 ASP 45 42 42 ASP ASP X . n A 1 46 ARG 46 43 43 ARG ARG X . n A 1 47 TYR 47 44 44 TYR TYR X . n A 1 48 PRO 48 45 45 PRO PRO X . n A 1 49 GLY 49 46 46 GLY GLY X . n A 1 50 ALA 50 47 47 ALA ALA X . n A 1 51 ASP 51 48 48 ASP ASP X . n A 1 52 VAL 52 49 49 VAL VAL X . n A 1 53 GLY 53 50 50 GLY GLY X . n A 1 54 ILE 54 51 51 ILE ILE X . n A 1 55 GLY 55 52 52 GLY GLY X . n A 1 56 GLU 56 53 53 GLU GLU X . n A 1 57 PHE 57 54 54 PHE PHE X . n A 1 58 GLY 58 55 55 GLY GLY X . n A 1 59 LYS 59 56 56 LYS LYS X . n A 1 60 ILE 60 57 57 ILE ILE X . n A 1 61 PHE 61 58 58 PHE PHE X . n A 1 62 LYS 62 59 59 LYS LYS X . n A 1 63 ALA 63 60 60 ALA ALA X . n A 1 64 LEU 64 61 61 LEU LEU X . n A 1 65 ARG 65 62 62 ARG ARG X . n A 1 66 ALA 66 63 63 ALA ALA X . n A 1 67 GLU 67 64 64 GLU GLU X . n A 1 68 GLY 68 65 65 GLY GLY X . n A 1 69 CYS 69 66 66 CYS CYS X . n A 1 70 ASP 70 67 67 ASP ASP X . n A 1 71 VAL 71 68 68 VAL VAL X . n A 1 72 VAL 72 69 69 VAL VAL X . n A 1 73 CYS 73 70 70 CYS CYS X . n A 1 74 PHE 74 71 71 PHE PHE X . n A 1 75 ALA 75 72 72 ALA ALA X . n A 1 76 GLY 76 73 73 GLY GLY X . n A 1 77 ASN 77 74 74 ASN ASN X . n A 1 78 VAL 78 75 75 VAL VAL X . n A 1 79 SER 79 76 76 SER SER X . n A 1 80 ARG 80 77 77 ARG ARG X . n A 1 81 PRO 81 78 78 PRO PRO X . n A 1 82 ASP 82 79 79 ASP ASP X . n A 1 83 PHE 83 80 80 PHE PHE X . n A 1 84 SER 84 81 81 SER SER X . n A 1 85 ALA 85 82 82 ALA ALA X . n A 1 86 LEU 86 83 83 LEU LEU X . n A 1 87 MSE 87 84 84 MSE MET X . n A 1 88 PRO 88 85 85 PRO PRO X . n A 1 89 ASP 89 86 86 ASP ASP X . n A 1 90 ALA 90 87 87 ALA ALA X . n A 1 91 ARG 91 88 88 ARG ARG X . n A 1 92 GLY 92 89 89 GLY GLY X . n A 1 93 LEU 93 90 90 LEU LEU X . n A 1 94 LYS 94 91 91 LYS LYS X . n A 1 95 VAL 95 92 92 VAL VAL X . n A 1 96 LEU 96 93 93 LEU LEU X . n A 1 97 PRO 97 94 94 PRO PRO X . n A 1 98 SER 98 95 95 SER SER X . n A 1 99 LEU 99 96 96 LEU LEU X . n A 1 100 ILE 100 97 97 ILE ILE X . n A 1 101 VAL 101 98 98 VAL VAL X . n A 1 102 ALA 102 99 99 ALA ALA X . n A 1 103 ALA 103 100 100 ALA ALA X . n A 1 104 ARG 104 101 101 ARG ARG X . n A 1 105 LYS 105 102 102 LYS LYS X . n A 1 106 GLY 106 103 103 GLY GLY X . n A 1 107 ASP 107 104 104 ASP ASP X . n A 1 108 ASP 108 105 105 ASP ASP X . n A 1 109 ALA 109 106 106 ALA ALA X . n A 1 110 LEU 110 107 107 LEU LEU X . n A 1 111 LEU 111 108 108 LEU LEU X . n A 1 112 ARG 112 109 109 ARG ARG X . n A 1 113 ARG 113 110 110 ARG ARG X . n A 1 114 VAL 114 111 111 VAL VAL X . n A 1 115 LEU 115 112 112 LEU LEU X . n A 1 116 ASP 116 113 113 ASP ASP X . n A 1 117 GLU 117 114 114 GLU GLU X . n A 1 118 PHE 118 115 115 PHE PHE X . n A 1 119 GLU 119 116 116 GLU GLU X . n A 1 120 LYS 120 117 117 LYS LYS X . n A 1 121 GLU 121 118 118 GLU GLU X . n A 1 122 GLY 122 119 119 GLY GLY X . n A 1 123 PHE 123 120 120 PHE PHE X . n A 1 124 GLU 124 121 121 GLU GLU X . n A 1 125 ILE 125 122 122 ILE ILE X . n A 1 126 GLU 126 123 123 GLU GLU X . n A 1 127 GLY 127 124 124 GLY GLY X . n A 1 128 ALA 128 125 125 ALA ALA X . n A 1 129 HIS 129 126 126 HIS HIS X . n A 1 130 GLU 130 127 127 GLU GLU X . n A 1 131 VAL 131 128 128 VAL VAL X . n A 1 132 MSE 132 129 129 MSE MSE X . n A 1 133 GLY 133 130 130 GLY GLY X . n A 1 134 GLU 134 131 131 GLU GLU X . n A 1 135 MSE 135 132 132 MSE MSE X . n A 1 136 THR 136 133 133 THR THR X . n A 1 137 LEU 137 134 134 LEU LEU X . n A 1 138 PRO 138 135 135 PRO PRO X . n A 1 139 ARG 139 136 136 ARG ARG X . n A 1 140 GLY 140 137 137 GLY GLY X . n A 1 141 ARG 141 138 138 ARG ARG X . n A 1 142 LEU 142 139 139 LEU LEU X . n A 1 143 GLY 143 140 140 GLY GLY X . n A 1 144 LYS 144 141 141 LYS LYS X . n A 1 145 VAL 145 142 142 VAL VAL X . n A 1 146 SER 146 143 143 SER SER X . n A 1 147 PRO 147 144 144 PRO PRO X . n A 1 148 ALA 148 145 145 ALA ALA X . n A 1 149 PRO 149 146 146 PRO PRO X . n A 1 150 GLU 150 147 147 GLU GLU X . n A 1 151 HIS 151 148 148 HIS HIS X . n A 1 152 MSE 152 149 149 MSE MSE X . n A 1 153 ALA 153 150 150 ALA ALA X . n A 1 154 ASP 154 151 151 ASP ASP X . n A 1 155 ILE 155 152 152 ILE ILE X . n A 1 156 ASP 156 153 153 ASP ASP X . n A 1 157 LYS 157 154 154 LYS LYS X . n A 1 158 ALA 158 155 155 ALA ALA X . n A 1 159 LEU 159 156 156 LEU LEU X . n A 1 160 ASP 160 157 157 ASP ASP X . n A 1 161 VAL 161 158 158 VAL VAL X . n A 1 162 ALA 162 159 159 ALA ALA X . n A 1 163 ARG 163 160 160 ARG ARG X . n A 1 164 GLU 164 161 161 GLU GLU X . n A 1 165 ILE 165 162 162 ILE ILE X . n A 1 166 GLY 166 163 163 GLY GLY X . n A 1 167 ARG 167 164 164 ARG ARG X . n A 1 168 LEU 168 165 165 LEU LEU X . n A 1 169 ASP 169 166 166 ASP ASP X . n A 1 170 ILE 170 167 167 ILE ILE X . n A 1 171 GLY 171 168 168 GLY GLY X . n A 1 172 GLN 172 169 169 GLN GLN X . n A 1 173 GLY 173 170 170 GLY GLY X . n A 1 174 ALA 174 171 171 ALA ALA X . n A 1 175 VAL 175 172 172 VAL VAL X . n A 1 176 VAL 176 173 173 VAL VAL X . n A 1 177 CYS 177 174 174 CYS CYS X . n A 1 178 GLU 178 175 175 GLU GLU X . n A 1 179 GLY 179 176 176 GLY GLY X . n A 1 180 LEU 180 177 177 LEU LEU X . n A 1 181 VAL 181 178 178 VAL VAL X . n A 1 182 LEU 182 179 179 LEU LEU X . n A 1 183 ALA 183 180 180 ALA ALA X . n A 1 184 VAL 184 181 181 VAL VAL X . n A 1 185 GLU 185 182 182 GLU GLU X . n A 1 186 ALA 186 183 183 ALA ALA X . n A 1 187 GLN 187 184 184 GLN GLN X . n A 1 188 GLU 188 185 185 GLU GLU X . n A 1 189 GLY 189 186 186 GLY GLY X . n A 1 190 THR 190 187 187 THR THR X . n A 1 191 ASP 191 188 188 ASP ASP X . n A 1 192 ALA 192 189 189 ALA ALA X . n A 1 193 MSE 193 190 190 MSE MSE X . n A 1 194 LEU 194 191 191 LEU LEU X . n A 1 195 ARG 195 192 192 ARG ARG X . n A 1 196 ARG 196 193 193 ARG ARG X . n A 1 197 VAL 197 194 194 VAL VAL X . n A 1 198 ALA 198 195 195 ALA ALA X . n A 1 199 ASP 199 196 196 ASP ASP X . n A 1 200 LEU 200 197 197 LEU LEU X . n A 1 201 PRO 201 198 198 PRO PRO X . n A 1 202 GLU 202 199 199 GLU GLU X . n A 1 203 ALA 203 200 200 ALA ALA X . n A 1 204 ILE 204 201 201 ILE ILE X . n A 1 205 ARG 205 202 202 ARG ARG X . n A 1 206 GLY 206 203 203 GLY GLY X . n A 1 207 ARG 207 204 204 ARG ARG X . n A 1 208 ALA 208 205 205 ALA ALA X . n A 1 209 GLU 209 206 206 GLU GLU X . n A 1 210 ARG 210 207 207 ARG ARG X . n A 1 211 ARG 211 208 208 ARG ARG X . n A 1 212 LEU 212 209 209 LEU LEU X . n A 1 213 GLY 213 210 210 GLY GLY X . n A 1 214 VAL 214 211 211 VAL VAL X . n A 1 215 LEU 215 212 212 LEU LEU X . n A 1 216 ALA 216 213 213 ALA ALA X . n A 1 217 LYS 217 214 214 LYS LYS X . n A 1 218 ALA 218 215 215 ALA ALA X . n A 1 219 PRO 219 216 216 PRO PRO X . n A 1 220 LYS 220 217 217 LYS LYS X . n A 1 221 PRO 221 218 218 PRO PRO X . n A 1 222 ILE 222 219 219 ILE ILE X . n A 1 223 GLN 223 220 220 GLN GLN X . n A 1 224 GLU 224 221 221 GLU GLN X . n A 1 225 THR 225 222 222 THR THR X . n A 1 226 ARG 226 223 223 ARG ARG X . n A 1 227 VAL 227 224 224 VAL VAL X . n A 1 228 ASP 228 225 225 ASP ASP X . n A 1 229 LEU 229 226 226 LEU LEU X . n A 1 230 PRO 230 227 227 PRO PRO X . n A 1 231 THR 231 228 228 THR THR X . n A 1 232 ILE 232 229 229 ILE ILE X . n A 1 233 GLY 233 230 230 GLY GLY X . n A 1 234 VAL 234 231 231 VAL VAL X . n A 1 235 ALA 235 232 232 ALA ALA X . n A 1 236 THR 236 233 233 THR THR X . n A 1 237 ILE 237 234 234 ILE ILE X . n A 1 238 HIS 238 235 235 HIS HIS X . n A 1 239 ARG 239 236 236 ARG ARG X . n A 1 240 ALA 240 237 237 ALA ALA X . n A 1 241 ALA 241 238 238 ALA ALA X . n A 1 242 ARG 242 239 239 ARG ARG X . n A 1 243 ALA 243 240 240 ALA ALA X . n A 1 244 GLY 244 241 241 GLY GLY X . n A 1 245 LEU 245 242 242 LEU LEU X . n A 1 246 ALA 246 243 243 ALA ALA X . n A 1 247 GLY 247 244 244 GLY GLY X . n A 1 248 ILE 248 245 245 ILE ILE X . n A 1 249 VAL 249 246 246 VAL VAL X . n A 1 250 GLY 250 247 247 GLY GLY X . n A 1 251 GLU 251 248 248 GLU GLU X . n A 1 252 ALA 252 249 249 ALA ALA X . n A 1 253 GLY 253 250 250 GLY GLY X . n A 1 254 ARG 254 251 251 ARG ARG X . n A 1 255 LEU 255 252 252 LEU LEU X . n A 1 256 LEU 256 253 253 LEU LEU X . n A 1 257 VAL 257 254 254 VAL VAL X . n A 1 258 VAL 258 255 255 VAL VAL X . n A 1 259 ASP 259 256 256 ASP ASP X . n A 1 260 ARG 260 257 257 ARG ARG X . n A 1 261 GLU 261 258 258 GLU GLU X . n A 1 262 ALA 262 259 259 ALA ALA X . n A 1 263 VAL 263 260 260 VAL VAL X . n A 1 264 ILE 264 261 261 ILE ILE X . n A 1 265 ALA 265 262 262 ALA ALA X . n A 1 266 ALA 266 263 263 ALA ALA X . n A 1 267 ALA 267 264 264 ALA ALA X . n A 1 268 ASP 268 265 265 ASP ASP X . n A 1 269 ASP 269 266 266 ASP ASP X . n A 1 270 LEU 270 267 267 LEU LEU X . n A 1 271 GLY 271 268 268 GLY GLY X . n A 1 272 LEU 272 269 269 LEU LEU X . n A 1 273 PHE 273 270 270 PHE PHE X . n A 1 274 VAL 274 271 271 VAL VAL X . n A 1 275 LEU 275 272 272 LEU LEU X . n A 1 276 GLY 276 273 273 GLY GLY X . n A 1 277 VAL 277 274 274 VAL VAL X . n A 1 278 ASP 278 275 275 ASP ASP X . n A 1 279 PRO 279 276 276 PRO PRO X . n A 1 280 GLN 280 277 277 GLN GLN X . n A 1 281 GLU 281 278 ? ? ? X . n A 1 282 ARG 282 279 ? ? ? X . n A 1 283 PRO 283 280 ? ? ? X . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Center for Structures of Membrane Proteins' _pdbx_SG_project.initial_of_center CSMP # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 1 MG MG X . C 3 LP5 1 302 1 LP5 UDG X . D 4 HOH 1 401 1 HOH HOH X . D 4 HOH 2 402 4 HOH HOH X . D 4 HOH 3 403 5 HOH HOH X . D 4 HOH 4 404 6 HOH HOH X . D 4 HOH 5 405 7 HOH HOH X . D 4 HOH 6 406 8 HOH HOH X . D 4 HOH 7 407 9 HOH HOH X . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 X MSE 1 ? MET SELENOMETHIONINE 2 A MSE 34 X MSE 31 ? MET SELENOMETHIONINE 3 A MSE 87 X MSE 84 ? MET SELENOMETHIONINE 4 A MSE 132 X MSE 129 ? MET SELENOMETHIONINE 5 A MSE 135 X MSE 132 ? MET SELENOMETHIONINE 6 A MSE 152 X MSE 149 ? MET SELENOMETHIONINE 7 A MSE 193 X MSE 190 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D 2 1 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_545 x,-y-1/2,-z+1/4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -37.1430000000 0.0000000000 0.0000000000 -1.0000000000 91.1610000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? D HOH . ? X HOH 405 ? 1_555 MG ? B MG . ? X MG 301 ? 1_555 O ? D HOH . ? X HOH 404 ? 1_555 102.3 ? 2 O ? D HOH . ? X HOH 405 ? 1_555 MG ? B MG . ? X MG 301 ? 1_555 O ? D HOH . ? X HOH 407 ? 1_555 81.3 ? 3 O ? D HOH . ? X HOH 404 ? 1_555 MG ? B MG . ? X MG 301 ? 1_555 O ? D HOH . ? X HOH 407 ? 1_555 91.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-03 2 'Structure model' 1 1 2012-11-14 3 'Structure model' 1 2 2012-11-21 4 'Structure model' 1 3 2013-04-17 5 'Structure model' 1 4 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Author supporting evidence' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category pdbx_struct_assembly_auth_evidence # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 19.5091 _pdbx_refine_tls.origin_y -34.0188 _pdbx_refine_tls.origin_z 22.8347 _pdbx_refine_tls.T[1][1] 0.5872 _pdbx_refine_tls.T[2][2] 0.6146 _pdbx_refine_tls.T[3][3] 0.6129 _pdbx_refine_tls.T[1][2] -0.0947 _pdbx_refine_tls.T[1][3] 0.0256 _pdbx_refine_tls.T[2][3] 0.0329 _pdbx_refine_tls.L[1][1] 1.3720 _pdbx_refine_tls.L[2][2] 0.3138 _pdbx_refine_tls.L[3][3] 3.5262 _pdbx_refine_tls.L[1][2] -0.3719 _pdbx_refine_tls.L[1][3] 1.2975 _pdbx_refine_tls.L[2][3] 0.3656 _pdbx_refine_tls.S[1][1] -0.0234 _pdbx_refine_tls.S[1][2] 0.0875 _pdbx_refine_tls.S[1][3] -0.1730 _pdbx_refine_tls.S[2][1] 0.0677 _pdbx_refine_tls.S[2][2] -0.1084 _pdbx_refine_tls.S[2][3] 0.0847 _pdbx_refine_tls.S[3][1] 0.0850 _pdbx_refine_tls.S[3][2] -0.3108 _pdbx_refine_tls.S[3][3] 0.1508 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement 1.7.3_928 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 X _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 221 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 X _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 221 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.333 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.081 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER X 35 ? ? 74.23 -4.65 2 1 MSE X 84 ? ? -114.68 74.35 3 1 ALA X 150 ? ? -34.85 -71.33 4 1 ILE X 167 ? ? -106.18 -93.28 5 1 ALA X 183 ? ? -169.95 100.61 6 1 GLN X 184 ? ? 79.38 -5.62 7 1 GLU X 206 ? ? -58.81 -73.54 8 1 ARG X 251 ? ? -93.01 37.20 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X ARG 223 ? CG ? A ARG 226 CG 2 1 Y 1 X ARG 223 ? CD ? A ARG 226 CD 3 1 Y 1 X ARG 223 ? NE ? A ARG 226 NE 4 1 Y 1 X ARG 223 ? CZ ? A ARG 226 CZ 5 1 Y 1 X ARG 223 ? NH1 ? A ARG 226 NH1 6 1 Y 1 X ARG 223 ? NH2 ? A ARG 226 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X GLY -2 ? A GLY 1 2 1 Y 1 X HIS -1 ? A HIS 2 3 1 Y 1 X MSE 0 ? A MSE 3 4 1 Y 1 X GLU 278 ? A GLU 281 5 1 Y 1 X ARG 279 ? A ARG 282 6 1 Y 1 X PRO 280 ? A PRO 283 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 ;(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE ; LP5 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? #