HEADER PROTEIN TRANSPORT 13-AUG-12 4GKY TITLE CRYSTAL STRUCTURE OF A CARBOHYDRATE-BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ERGIC-53; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CARBOHYDRATE RECOGNITION DOMAIN UNP RESIDUES 31-270; COMPND 5 SYNONYM: ER-GOLGI INTERMEDIATE COMPARTMENT 53 KDA PROTEIN, GP58, COMPND 6 INTRACELLULAR MANNOSE-SPECIFIC LECTIN MR60, LECTIN MANNOSE-BINDING 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERGIC53, F5F8D, LMAN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PROTEIN TRANSPORT, ENDOPLASMIC RETICULUM EXPDTA X-RAY DIFFRACTION AUTHOR R.C.PAGE,C.ZHENG,J.C.NIX,S.MISRA,B.ZHANG REVDAT 5 30-OCT-24 4GKY 1 REMARK REVDAT 4 13-SEP-23 4GKY 1 HETSYN REVDAT 3 29-JUL-20 4GKY 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE REVDAT 2 31-JUL-13 4GKY 1 JRNL REVDAT 1 05-JUN-13 4GKY 0 JRNL AUTH C.ZHENG,R.C.PAGE,V.DAS,J.C.NIX,E.WIGREN,S.MISRA,B.ZHANG JRNL TITL STRUCTURAL CHARACTERIZATION OF CARBOHYDRATE BINDING BY LMAN1 JRNL TITL 2 PROTEIN PROVIDES NEW INSIGHT INTO THE ENDOPLASMIC RETICULUM JRNL TITL 3 EXPORT OF FACTORS V (FV) AND VIII (FVIII). JRNL REF J.BIOL.CHEM. V. 288 20499 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23709226 JRNL DOI 10.1074/JBC.M113.461434 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 10427 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1043 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3368 - 4.6272 1.00 1393 156 0.1757 0.1877 REMARK 3 2 4.6272 - 3.6737 1.00 1345 151 0.1603 0.1651 REMARK 3 3 3.6737 - 3.2096 1.00 1340 151 0.1802 0.2096 REMARK 3 4 3.2096 - 2.9162 1.00 1318 144 0.2212 0.2376 REMARK 3 5 2.9162 - 2.7073 1.00 1330 150 0.2272 0.2560 REMARK 3 6 2.7073 - 2.5477 1.00 1319 144 0.2442 0.3006 REMARK 3 7 2.5477 - 2.4201 1.00 1339 147 0.2545 0.2934 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1872 REMARK 3 ANGLE : 0.979 2538 REMARK 3 CHIRALITY : 0.076 264 REMARK 3 PLANARITY : 0.010 335 REMARK 3 DIHEDRAL : 14.526 658 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GKY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074313. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(111) SIDE BOUNCE REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10429 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 47.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 23.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 7.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.8_1069 REMARK 200 STARTING MODEL: PDB ENTRY 3A4U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG 8000, 0.002M CALCIUM CHLORIDE, REMARK 280 0.01M ALPHA-1,2-DIMANNOSE, 0.05M SODIUM CACODYLATE, PH 6.2, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 HIS A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 GLY A 22 REMARK 465 LEU A 23 REMARK 465 VAL A 24 REMARK 465 PRO A 25 REMARK 465 ARG A 26 REMARK 465 GLY A 27 REMARK 465 SER A 28 REMARK 465 HIS A 29 REMARK 465 MET A 30 REMARK 465 ASP A 31 REMARK 465 GLY A 32 REMARK 465 VAL A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 35 REMARK 465 ASP A 36 REMARK 465 PRO A 37 REMARK 465 ALA A 38 REMARK 465 VAL A 39 REMARK 465 ALA A 40 REMARK 465 PRO A 270 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 66 4.28 80.64 REMARK 500 ASN A 218 21.74 -78.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 152 OD2 REMARK 620 2 ASP A 152 OD1 49.0 REMARK 620 3 PHE A 154 O 103.5 72.6 REMARK 620 4 ASN A 156 OD1 161.3 148.7 91.6 REMARK 620 5 ASP A 181 OD1 81.9 115.3 84.4 88.9 REMARK 620 6 HOH A 442 O 98.8 59.0 84.4 93.4 168.6 REMARK 620 7 HOH A 443 O 83.4 117.2 170.1 80.4 89.6 101.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 155 OD1 REMARK 620 2 ASP A 157 OD1 65.3 REMARK 620 3 ASP A 157 OD2 93.4 47.1 REMARK 620 4 ASN A 161 OD1 86.9 91.4 131.9 REMARK 620 5 ASN A 162 OD1 89.1 148.4 160.1 67.9 REMARK 620 6 ASP A 181 OD2 87.4 104.0 68.0 159.6 92.4 REMARK 620 7 HOH A 444 O 150.2 144.4 108.2 93.2 63.7 82.2 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3A4U RELATED DB: PDB REMARK 900 IDENTICAL PROTEIN IN THE CALCIUM-BOUND STATE, WITHOUT ALPHA-1,2- REMARK 900 DIMANNOSE AND IN COMPLEX WITH MCDF2 REMARK 900 RELATED ID: 3LCP RELATED DB: PDB REMARK 900 IDENTICAL PROTEIN IN THE CALCIUM-BOUND STATE, WITHOUT ALPHA-1,2- REMARK 900 DIMANNOSE AND IN COMPLEX WITH MCDF2 DBREF 4GKY A 31 270 UNP P49257 LMAN1_HUMAN 31 270 SEQADV 4GKY MET A 10 UNP P49257 EXPRESSION TAG SEQADV 4GKY GLY A 11 UNP P49257 EXPRESSION TAG SEQADV 4GKY SER A 12 UNP P49257 EXPRESSION TAG SEQADV 4GKY SER A 13 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 14 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 15 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 16 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 17 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 18 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 19 UNP P49257 EXPRESSION TAG SEQADV 4GKY SER A 20 UNP P49257 EXPRESSION TAG SEQADV 4GKY SER A 21 UNP P49257 EXPRESSION TAG SEQADV 4GKY GLY A 22 UNP P49257 EXPRESSION TAG SEQADV 4GKY LEU A 23 UNP P49257 EXPRESSION TAG SEQADV 4GKY VAL A 24 UNP P49257 EXPRESSION TAG SEQADV 4GKY PRO A 25 UNP P49257 EXPRESSION TAG SEQADV 4GKY ARG A 26 UNP P49257 EXPRESSION TAG SEQADV 4GKY GLY A 27 UNP P49257 EXPRESSION TAG SEQADV 4GKY SER A 28 UNP P49257 EXPRESSION TAG SEQADV 4GKY HIS A 29 UNP P49257 EXPRESSION TAG SEQADV 4GKY MET A 30 UNP P49257 EXPRESSION TAG SEQRES 1 A 261 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 261 LEU VAL PRO ARG GLY SER HIS MET ASP GLY VAL GLY GLY SEQRES 3 A 261 ASP PRO ALA VAL ALA LEU PRO HIS ARG ARG PHE GLU TYR SEQRES 4 A 261 LYS TYR SER PHE LYS GLY PRO HIS LEU VAL GLN SER ASP SEQRES 5 A 261 GLY THR VAL PRO PHE TRP ALA HIS ALA GLY ASN ALA ILE SEQRES 6 A 261 PRO SER SER ASP GLN ILE ARG VAL ALA PRO SER LEU LYS SEQRES 7 A 261 SER GLN ARG GLY SER VAL TRP THR LYS THR LYS ALA ALA SEQRES 8 A 261 PHE GLU ASN TRP GLU VAL GLU VAL THR PHE ARG VAL THR SEQRES 9 A 261 GLY ARG GLY ARG ILE GLY ALA ASP GLY LEU ALA ILE TRP SEQRES 10 A 261 TYR ALA GLU ASN GLN GLY LEU GLU GLY PRO VAL PHE GLY SEQRES 11 A 261 SER ALA ASP LEU TRP ASN GLY VAL GLY ILE PHE PHE ASP SEQRES 12 A 261 SER PHE ASP ASN ASP GLY LYS LYS ASN ASN PRO ALA ILE SEQRES 13 A 261 VAL ILE ILE GLY ASN ASN GLY GLN ILE HIS TYR ASP HIS SEQRES 14 A 261 GLN ASN ASP GLY ALA SER GLN ALA LEU ALA SER CYS GLN SEQRES 15 A 261 ARG ASP PHE ARG ASN LYS PRO TYR PRO VAL ARG ALA LYS SEQRES 16 A 261 ILE THR TYR TYR GLN ASN THR LEU THR VAL MET ILE ASN SEQRES 17 A 261 ASN GLY PHE THR PRO ASP LYS ASN ASP TYR GLU PHE CYS SEQRES 18 A 261 ALA LYS VAL GLU ASN MET ILE ILE PRO ALA GLN GLY HIS SEQRES 19 A 261 PHE GLY ILE SER ALA ALA THR GLY GLY LEU ALA ASP ASP SEQRES 20 A 261 HIS ASP VAL LEU SER PHE LEU THR PHE GLN LEU THR GLU SEQRES 21 A 261 PRO HET CA A 301 1 HET CA A 302 1 HET MAN A 303 24 HET GOL A 304 6 HET GOL A 305 6 HETNAM CA CALCIUM ION HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GOL GLYCEROL HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA 2(CA 2+) FORMUL 4 MAN C6 H12 O6 FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *88(H2 O) HELIX 1 1 TYR A 48 SER A 51 5 4 SHEET 1 A 4 HIS A 43 PHE A 46 0 SHEET 2 A 4 ASP A 256 THR A 268 -1 O GLN A 266 N ARG A 45 SHEET 3 A 4 ILE A 80 ALA A 83 -1 N ALA A 83 O HIS A 257 SHEET 4 A 4 ILE A 74 PRO A 75 -1 N ILE A 74 O ARG A 81 SHEET 1 B 6 PHE A 52 LYS A 53 0 SHEET 2 B 6 ASP A 256 THR A 268 -1 O PHE A 262 N PHE A 52 SHEET 3 B 6 TRP A 104 THR A 113 -1 N GLU A 105 O PHE A 265 SHEET 4 B 6 VAL A 201 TYR A 208 -1 O TYR A 207 N TRP A 104 SHEET 5 B 6 THR A 211 ASN A 217 -1 O ASN A 217 N ARG A 202 SHEET 6 B 6 GLU A 228 VAL A 233 -1 O VAL A 233 N LEU A 212 SHEET 1 C 7 TRP A 67 GLY A 71 0 SHEET 2 C 7 ARG A 90 THR A 95 -1 O TRP A 94 N ALA A 68 SHEET 3 C 7 HIS A 243 ALA A 249 -1 O ILE A 246 N VAL A 93 SHEET 4 C 7 GLY A 122 ALA A 128 -1 N TRP A 126 O GLY A 245 SHEET 5 C 7 ASN A 145 ASP A 152 -1 O PHE A 151 N LEU A 123 SHEET 6 C 7 ALA A 164 ASN A 171 -1 O VAL A 166 N PHE A 150 SHEET 7 C 7 ALA A 188 GLN A 191 -1 O CYS A 190 N ILE A 165 SSBOND 1 CYS A 190 CYS A 230 1555 1555 2.10 LINK OD2 ASP A 152 CA CA A 301 1555 1555 2.57 LINK OD1 ASP A 152 CA CA A 301 1555 1555 2.67 LINK O PHE A 154 CA CA A 301 1555 1555 2.50 LINK OD1 ASP A 155 CA CA A 302 1555 1555 2.60 LINK OD1 ASN A 156 CA CA A 301 1555 1555 2.89 LINK OD1 ASP A 157 CA CA A 302 1555 1555 2.56 LINK OD2 ASP A 157 CA CA A 302 1555 1555 2.87 LINK OD1 ASN A 161 CA CA A 302 1555 1555 2.30 LINK OD1 ASN A 162 CA CA A 302 1555 1555 2.48 LINK OD1 ASP A 181 CA CA A 301 1555 1555 2.29 LINK OD2 ASP A 181 CA CA A 302 1555 1555 2.40 LINK CA CA A 301 O HOH A 442 1555 1555 2.60 LINK CA CA A 301 O HOH A 443 1555 1555 2.59 LINK CA CA A 302 O HOH A 444 1555 1555 2.66 CISPEP 1 GLY A 54 PRO A 55 0 15.03 CISPEP 2 ALA A 120 ASP A 121 0 -9.55 CISPEP 3 ASN A 162 PRO A 163 0 0.93 CRYST1 110.263 110.263 38.332 90.00 90.00 120.00 P 6 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009069 0.005236 0.000000 0.00000 SCALE2 0.000000 0.010472 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026088 0.00000