data_4GOE # _entry.id 4GOE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GOE pdb_00004goe 10.2210/pdb4goe/pdb RCSB RCSB074437 ? ? WWPDB D_1000074437 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-11-21 2 'Structure model' 1 1 2013-01-02 3 'Structure model' 1 2 2013-01-16 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Source and taxonomy' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' entity_src_gen 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GOE _pdbx_database_status.recvd_initial_deposition_date 2012-08-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4GOC 'Crystal structure of Get5 UBL, the yeast homolog of the SGTA binding partner, Ubl4A' unspecified PDB 4GOD 'Crystal structure of unmodified SGTA' unspecified PDB 4GOF . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chartron, J.W.' 1 'VanderVelde, D.G.' 2 'Clemons Jr., W.M.' 3 # _citation.id primary _citation.title ;Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface. ; _citation.journal_abbrev 'Cell Rep' _citation.journal_volume 2 _citation.page_first 1620 _citation.page_last 1632 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2211-1247 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23142665 _citation.pdbx_database_id_DOI 10.1016/j.celrep.2012.10.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chartron, J.W.' 1 ? primary 'Vandervelde, D.G.' 2 ? primary 'Clemons, W.M.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Small glutamine-rich tetratricopeptide repeat-containing protein alpha' 5738.505 2 ? ? ? ? 2 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 water nat water 18.015 107 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha-SGT, Vpu-binding protein, UBP' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLAL _entity_poly.pdbx_seq_one_letter_code_can MKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLAL _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 BETA-MERCAPTOETHANOL BME 3 'CHLORIDE ION' CL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 LYS n 1 4 ARG n 1 5 LEU n 1 6 ALA n 1 7 TYR n 1 8 ALA n 1 9 ILE n 1 10 ILE n 1 11 GLN n 1 12 PHE n 1 13 LEU n 1 14 HIS n 1 15 ASP n 1 16 GLN n 1 17 LEU n 1 18 ARG n 1 19 HIS n 1 20 GLY n 1 21 GLY n 1 22 LEU n 1 23 SER n 1 24 SER n 1 25 ASP n 1 26 ALA n 1 27 GLN n 1 28 GLU n 1 29 SER n 1 30 LEU n 1 31 GLU n 1 32 VAL n 1 33 ALA n 1 34 ILE n 1 35 GLN n 1 36 CYS n 1 37 LEU n 1 38 GLU n 1 39 THR n 1 40 ALA n 1 41 PHE n 1 42 GLY n 1 43 VAL n 1 44 THR n 1 45 VAL n 1 46 GLU n 1 47 ASP n 1 48 SER n 1 49 ASP n 1 50 LEU n 1 51 ALA n 1 52 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SGT, SGT1, SGTA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'NiCo21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET33b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 3 3 MET MET A . n A 1 2 LYS 2 4 4 LYS LYS A . n A 1 3 LYS 3 5 5 LYS LYS A . n A 1 4 ARG 4 6 6 ARG ARG A . n A 1 5 LEU 5 7 7 LEU LEU A . n A 1 6 ALA 6 8 8 ALA ALA A . n A 1 7 TYR 7 9 9 TYR TYR A . n A 1 8 ALA 8 10 10 ALA ALA A . n A 1 9 ILE 9 11 11 ILE ILE A . n A 1 10 ILE 10 12 12 ILE ILE A . n A 1 11 GLN 11 13 13 GLN GLN A . n A 1 12 PHE 12 14 14 PHE PHE A . n A 1 13 LEU 13 15 15 LEU LEU A . n A 1 14 HIS 14 16 16 HIS HIS A . n A 1 15 ASP 15 17 17 ASP ASP A . n A 1 16 GLN 16 18 18 GLN GLN A . n A 1 17 LEU 17 19 19 LEU LEU A . n A 1 18 ARG 18 20 20 ARG ARG A . n A 1 19 HIS 19 21 21 HIS HIS A . n A 1 20 GLY 20 22 22 GLY GLY A . n A 1 21 GLY 21 23 23 GLY GLY A . n A 1 22 LEU 22 24 24 LEU LEU A . n A 1 23 SER 23 25 25 SER SER A . n A 1 24 SER 24 26 26 SER SER A . n A 1 25 ASP 25 27 27 ASP ASP A . n A 1 26 ALA 26 28 28 ALA ALA A . n A 1 27 GLN 27 29 29 GLN GLN A . n A 1 28 GLU 28 30 30 GLU GLU A . n A 1 29 SER 29 31 31 SER SER A . n A 1 30 LEU 30 32 32 LEU LEU A . n A 1 31 GLU 31 33 33 GLU GLU A . n A 1 32 VAL 32 34 34 VAL VAL A . n A 1 33 ALA 33 35 35 ALA ALA A . n A 1 34 ILE 34 36 36 ILE ILE A . n A 1 35 GLN 35 37 37 GLN GLN A . n A 1 36 CYS 36 38 38 CYS CYS A . n A 1 37 LEU 37 39 39 LEU LEU A . n A 1 38 GLU 38 40 40 GLU GLU A . n A 1 39 THR 39 41 41 THR THR A . n A 1 40 ALA 40 42 42 ALA ALA A . n A 1 41 PHE 41 43 43 PHE PHE A . n A 1 42 GLY 42 44 44 GLY GLY A . n A 1 43 VAL 43 45 45 VAL VAL A . n A 1 44 THR 44 46 46 THR THR A . n A 1 45 VAL 45 47 47 VAL VAL A . n A 1 46 GLU 46 48 48 GLU GLU A . n A 1 47 ASP 47 49 49 ASP ASP A . n A 1 48 SER 48 50 50 SER SER A . n A 1 49 ASP 49 51 51 ASP ASP A . n A 1 50 LEU 50 52 52 LEU LEU A . n A 1 51 ALA 51 53 53 ALA ALA A . n A 1 52 LEU 52 54 54 LEU LEU A . n B 1 1 MET 1 3 3 MET MET B . n B 1 2 LYS 2 4 4 LYS LYS B . n B 1 3 LYS 3 5 5 LYS LYS B . n B 1 4 ARG 4 6 6 ARG ARG B . n B 1 5 LEU 5 7 7 LEU LEU B . n B 1 6 ALA 6 8 8 ALA ALA B . n B 1 7 TYR 7 9 9 TYR TYR B . n B 1 8 ALA 8 10 10 ALA ALA B . n B 1 9 ILE 9 11 11 ILE ILE B . n B 1 10 ILE 10 12 12 ILE ILE B . n B 1 11 GLN 11 13 13 GLN GLN B . n B 1 12 PHE 12 14 14 PHE PHE B . n B 1 13 LEU 13 15 15 LEU LEU B . n B 1 14 HIS 14 16 16 HIS HIS B . n B 1 15 ASP 15 17 17 ASP ASP B . n B 1 16 GLN 16 18 18 GLN GLN B . n B 1 17 LEU 17 19 19 LEU LEU B . n B 1 18 ARG 18 20 20 ARG ARG B . n B 1 19 HIS 19 21 21 HIS HIS B . n B 1 20 GLY 20 22 22 GLY GLY B . n B 1 21 GLY 21 23 23 GLY GLY B . n B 1 22 LEU 22 24 24 LEU LEU B . n B 1 23 SER 23 25 25 SER SER B . n B 1 24 SER 24 26 26 SER SER B . n B 1 25 ASP 25 27 27 ASP ASP B . n B 1 26 ALA 26 28 28 ALA ALA B . n B 1 27 GLN 27 29 29 GLN GLN B . n B 1 28 GLU 28 30 30 GLU GLU B . n B 1 29 SER 29 31 31 SER SER B . n B 1 30 LEU 30 32 32 LEU LEU B . n B 1 31 GLU 31 33 33 GLU GLU B . n B 1 32 VAL 32 34 34 VAL VAL B . n B 1 33 ALA 33 35 35 ALA ALA B . n B 1 34 ILE 34 36 36 ILE ILE B . n B 1 35 GLN 35 37 37 GLN GLN B . n B 1 36 CYS 36 38 38 CYS CYS B . n B 1 37 LEU 37 39 39 LEU LEU B . n B 1 38 GLU 38 40 40 GLU GLU B . n B 1 39 THR 39 41 41 THR THR B . n B 1 40 ALA 40 42 42 ALA ALA B . n B 1 41 PHE 41 43 43 PHE PHE B . n B 1 42 GLY 42 44 44 GLY GLY B . n B 1 43 VAL 43 45 45 VAL VAL B . n B 1 44 THR 44 46 46 THR THR B . n B 1 45 VAL 45 47 47 VAL VAL B . n B 1 46 GLU 46 48 ? ? ? B . n B 1 47 ASP 47 49 ? ? ? B . n B 1 48 SER 48 50 ? ? ? B . n B 1 49 ASP 49 51 ? ? ? B . n B 1 50 LEU 50 52 ? ? ? B . n B 1 51 ALA 51 53 ? ? ? B . n B 1 52 LEU 52 54 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BME 1 101 38 BME BME A . D 3 CL 1 102 1 CL CL A . E 4 HOH 1 201 1 HOH HOH A . E 4 HOH 2 202 2 HOH HOH A . E 4 HOH 3 203 3 HOH HOH A . E 4 HOH 4 204 4 HOH HOH A . E 4 HOH 5 205 5 HOH HOH A . E 4 HOH 6 206 6 HOH HOH A . E 4 HOH 7 207 8 HOH HOH A . E 4 HOH 8 208 9 HOH HOH A . E 4 HOH 9 209 10 HOH HOH A . E 4 HOH 10 210 12 HOH HOH A . E 4 HOH 11 211 13 HOH HOH A . E 4 HOH 12 212 15 HOH HOH A . E 4 HOH 13 213 19 HOH HOH A . E 4 HOH 14 214 20 HOH HOH A . E 4 HOH 15 215 21 HOH HOH A . E 4 HOH 16 216 22 HOH HOH A . E 4 HOH 17 217 25 HOH HOH A . E 4 HOH 18 218 26 HOH HOH A . E 4 HOH 19 219 27 HOH HOH A . E 4 HOH 20 220 29 HOH HOH A . E 4 HOH 21 221 30 HOH HOH A . E 4 HOH 22 222 31 HOH HOH A . E 4 HOH 23 223 32 HOH HOH A . E 4 HOH 24 224 33 HOH HOH A . E 4 HOH 25 225 34 HOH HOH A . E 4 HOH 26 226 35 HOH HOH A . E 4 HOH 27 227 37 HOH HOH A . E 4 HOH 28 228 38 HOH HOH A . E 4 HOH 29 229 39 HOH HOH A . E 4 HOH 30 230 42 HOH HOH A . E 4 HOH 31 231 43 HOH HOH A . E 4 HOH 32 232 44 HOH HOH A . E 4 HOH 33 233 47 HOH HOH A . E 4 HOH 34 234 49 HOH HOH A . E 4 HOH 35 235 51 HOH HOH A . E 4 HOH 36 236 55 HOH HOH A . E 4 HOH 37 237 56 HOH HOH A . E 4 HOH 38 238 57 HOH HOH A . E 4 HOH 39 239 59 HOH HOH A . E 4 HOH 40 240 61 HOH HOH A . E 4 HOH 41 241 62 HOH HOH A . E 4 HOH 42 242 64 HOH HOH A . E 4 HOH 43 243 65 HOH HOH A . E 4 HOH 44 244 70 HOH HOH A . E 4 HOH 45 245 72 HOH HOH A . E 4 HOH 46 246 74 HOH HOH A . E 4 HOH 47 247 75 HOH HOH A . E 4 HOH 48 248 78 HOH HOH A . E 4 HOH 49 249 79 HOH HOH A . E 4 HOH 50 250 82 HOH HOH A . E 4 HOH 51 251 83 HOH HOH A . E 4 HOH 52 252 85 HOH HOH A . E 4 HOH 53 253 86 HOH HOH A . E 4 HOH 54 254 88 HOH HOH A . E 4 HOH 55 255 90 HOH HOH A . E 4 HOH 56 256 91 HOH HOH A . E 4 HOH 57 257 93 HOH HOH A . E 4 HOH 58 258 100 HOH HOH A . E 4 HOH 59 259 101 HOH HOH A . E 4 HOH 60 260 104 HOH HOH A . E 4 HOH 61 261 106 HOH HOH A . F 4 HOH 1 101 7 HOH HOH B . F 4 HOH 2 102 11 HOH HOH B . F 4 HOH 3 103 14 HOH HOH B . F 4 HOH 4 104 16 HOH HOH B . F 4 HOH 5 105 17 HOH HOH B . F 4 HOH 6 106 18 HOH HOH B . F 4 HOH 7 107 23 HOH HOH B . F 4 HOH 8 108 24 HOH HOH B . F 4 HOH 9 109 28 HOH HOH B . F 4 HOH 10 110 36 HOH HOH B . F 4 HOH 11 111 40 HOH HOH B . F 4 HOH 12 112 41 HOH HOH B . F 4 HOH 13 113 45 HOH HOH B . F 4 HOH 14 114 46 HOH HOH B . F 4 HOH 15 115 48 HOH HOH B . F 4 HOH 16 116 50 HOH HOH B . F 4 HOH 17 117 52 HOH HOH B . F 4 HOH 18 118 53 HOH HOH B . F 4 HOH 19 119 54 HOH HOH B . F 4 HOH 20 120 58 HOH HOH B . F 4 HOH 21 121 60 HOH HOH B . F 4 HOH 22 122 63 HOH HOH B . F 4 HOH 23 123 66 HOH HOH B . F 4 HOH 24 124 67 HOH HOH B . F 4 HOH 25 125 68 HOH HOH B . F 4 HOH 26 126 69 HOH HOH B . F 4 HOH 27 127 71 HOH HOH B . F 4 HOH 28 128 73 HOH HOH B . F 4 HOH 29 129 76 HOH HOH B . F 4 HOH 30 130 77 HOH HOH B . F 4 HOH 31 131 80 HOH HOH B . F 4 HOH 32 132 81 HOH HOH B . F 4 HOH 33 133 84 HOH HOH B . F 4 HOH 34 134 87 HOH HOH B . F 4 HOH 35 135 89 HOH HOH B . F 4 HOH 36 136 92 HOH HOH B . F 4 HOH 37 137 94 HOH HOH B . F 4 HOH 38 138 95 HOH HOH B . F 4 HOH 39 139 96 HOH HOH B . F 4 HOH 40 140 97 HOH HOH B . F 4 HOH 41 141 98 HOH HOH B . F 4 HOH 42 142 99 HOH HOH B . F 4 HOH 43 143 102 HOH HOH B . F 4 HOH 44 144 103 HOH HOH B . F 4 HOH 45 145 105 HOH HOH B . F 4 HOH 46 146 107 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8_1069)' ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # _cell.entry_id 4GOE _cell.length_a 29.726 _cell.length_b 44.132 _cell.length_c 63.975 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GOE _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4GOE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.72 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details '10% 2-propanol, 0.1 M sodium citrate, 26% PEG 400, 10 mM 2-mercaptoethanol, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2012-01-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Liquid nitrogen-cooled double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0000 # _reflns.entry_id 4GOE _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 29.73 _reflns.d_resolution_high 1.45 _reflns.number_obs 15303 _reflns.number_all ? _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.47 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs 0.728 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 767 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4GOE _refine.ls_number_reflns_obs 15276 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.55 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.726 _refine.ls_d_res_high 1.450 _refine.ls_percent_reflns_obs 98.31 _refine.ls_R_factor_obs 0.1824 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1808 _refine.ls_R_factor_R_free 0.2030 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.16 _refine.ls_number_reflns_R_free 1093 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.12 _refine.pdbx_overall_phase_error 18.68 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 751 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 107 _refine_hist.number_atoms_total 863 _refine_hist.d_res_high 1.450 _refine_hist.d_res_low 29.726 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 763 ? 'X-RAY DIFFRACTION' f_angle_d 0.976 ? ? 1025 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 17.166 ? ? 283 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.066 ? ? 120 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 131 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.4500 1.5160 1764 0.2335 99.00 0.2513 . . 131 . . . . 'X-RAY DIFFRACTION' . 1.5160 1.5959 1763 0.2284 99.00 0.2507 . . 118 . . . . 'X-RAY DIFFRACTION' . 1.5959 1.6959 1744 0.2002 99.00 0.2525 . . 134 . . . . 'X-RAY DIFFRACTION' . 1.6959 1.8268 1752 0.1973 99.00 0.2379 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.8268 2.0106 1751 0.1750 99.00 0.2328 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.0106 2.3015 1764 0.1518 98.00 0.1667 . . 153 . . . . 'X-RAY DIFFRACTION' . 2.3015 2.8992 1791 0.1776 99.00 0.1896 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.8992 29.7322 1854 0.1734 95.00 0.1871 . . 128 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4GOE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4GOE _struct.title 'Crystal structure of the SGTA homodimerization domain with a covalent modification of a single C38' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GOE _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Four-helix bundle, Protein-protein interaction, Ubl4A ubiquitin-like domain, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SGTA_HUMAN _struct_ref.pdbx_db_accession O43765 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLAL _struct_ref.pdbx_align_begin 4 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4GOE A 2 ? 52 ? O43765 4 ? 54 ? 4 54 2 1 4GOE B 2 ? 52 ? O43765 4 ? 54 ? 4 54 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4GOE MET A 1 ? UNP O43765 ? ? 'expression tag' 3 1 2 4GOE MET B 1 ? UNP O43765 ? ? 'expression tag' 3 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1540 ? 1 MORE -20 ? 1 'SSA (A^2)' 5720 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 2 ? GLY A 20 ? LYS A 4 GLY A 22 1 ? 19 HELX_P HELX_P2 2 SER A 23 ? GLY A 42 ? SER A 25 GLY A 44 1 ? 20 HELX_P HELX_P3 3 LYS B 2 ? GLY B 20 ? LYS B 4 GLY B 22 1 ? 19 HELX_P HELX_P4 4 SER B 23 ? GLY B 42 ? SER B 25 GLY B 44 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 36 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id S2 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 38 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.014 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BME 101 ? 5 'BINDING SITE FOR RESIDUE BME A 101' AC2 Software A CL 102 ? 4 'BINDING SITE FOR RESIDUE CL A 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLN A 35 ? GLN A 37 . ? 1_555 ? 2 AC1 5 CYS A 36 ? CYS A 38 . ? 1_555 ? 3 AC1 5 ALA A 51 ? ALA A 53 . ? 1_555 ? 4 AC1 5 LEU A 52 ? LEU A 54 . ? 1_555 ? 5 AC1 5 TYR B 7 ? TYR B 9 . ? 3_455 ? 6 AC2 4 HIS A 14 ? HIS A 16 . ? 1_555 ? 7 AC2 4 HIS A 14 ? HIS A 16 . ? 2_555 ? 8 AC2 4 ARG A 18 ? ARG A 20 . ? 2_555 ? 9 AC2 4 ARG A 18 ? ARG A 20 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 243 ? ? O A HOH 249 ? ? 2.02 2 1 OE1 A GLU 33 ? ? O A HOH 226 ? ? 2.16 3 1 O B ASP 27 ? ? O B HOH 126 ? ? 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 47 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -126.77 _pdbx_validate_torsion.psi -59.02 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CL 102 ? D CL . 2 1 A HOH 201 ? E HOH . 3 1 A HOH 220 ? E HOH . 4 1 B HOH 132 ? F HOH . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLU 48 ? B GLU 46 2 1 Y 1 B ASP 49 ? B ASP 47 3 1 Y 1 B SER 50 ? B SER 48 4 1 Y 1 B ASP 51 ? B ASP 49 5 1 Y 1 B LEU 52 ? B LEU 50 6 1 Y 1 B ALA 53 ? B ALA 51 7 1 Y 1 B LEU 54 ? B LEU 52 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 BME C1 C N N 57 BME C2 C N N 58 BME O1 O N N 59 BME S2 S N N 60 BME H11 H N N 61 BME H12 H N N 62 BME H21 H N N 63 BME H22 H N N 64 BME HO1 H N N 65 BME HS2 H N N 66 CL CL CL N N 67 CYS N N N N 68 CYS CA C N R 69 CYS C C N N 70 CYS O O N N 71 CYS CB C N N 72 CYS SG S N N 73 CYS OXT O N N 74 CYS H H N N 75 CYS H2 H N N 76 CYS HA H N N 77 CYS HB2 H N N 78 CYS HB3 H N N 79 CYS HG H N N 80 CYS HXT H N N 81 GLN N N N N 82 GLN CA C N S 83 GLN C C N N 84 GLN O O N N 85 GLN CB C N N 86 GLN CG C N N 87 GLN CD C N N 88 GLN OE1 O N N 89 GLN NE2 N N N 90 GLN OXT O N N 91 GLN H H N N 92 GLN H2 H N N 93 GLN HA H N N 94 GLN HB2 H N N 95 GLN HB3 H N N 96 GLN HG2 H N N 97 GLN HG3 H N N 98 GLN HE21 H N N 99 GLN HE22 H N N 100 GLN HXT H N N 101 GLU N N N N 102 GLU CA C N S 103 GLU C C N N 104 GLU O O N N 105 GLU CB C N N 106 GLU CG C N N 107 GLU CD C N N 108 GLU OE1 O N N 109 GLU OE2 O N N 110 GLU OXT O N N 111 GLU H H N N 112 GLU H2 H N N 113 GLU HA H N N 114 GLU HB2 H N N 115 GLU HB3 H N N 116 GLU HG2 H N N 117 GLU HG3 H N N 118 GLU HE2 H N N 119 GLU HXT H N N 120 GLY N N N N 121 GLY CA C N N 122 GLY C C N N 123 GLY O O N N 124 GLY OXT O N N 125 GLY H H N N 126 GLY H2 H N N 127 GLY HA2 H N N 128 GLY HA3 H N N 129 GLY HXT H N N 130 HIS N N N N 131 HIS CA C N S 132 HIS C C N N 133 HIS O O N N 134 HIS CB C N N 135 HIS CG C Y N 136 HIS ND1 N Y N 137 HIS CD2 C Y N 138 HIS CE1 C Y N 139 HIS NE2 N Y N 140 HIS OXT O N N 141 HIS H H N N 142 HIS H2 H N N 143 HIS HA H N N 144 HIS HB2 H N N 145 HIS HB3 H N N 146 HIS HD1 H N N 147 HIS HD2 H N N 148 HIS HE1 H N N 149 HIS HE2 H N N 150 HIS HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 LEU N N N N 177 LEU CA C N S 178 LEU C C N N 179 LEU O O N N 180 LEU CB C N N 181 LEU CG C N N 182 LEU CD1 C N N 183 LEU CD2 C N N 184 LEU OXT O N N 185 LEU H H N N 186 LEU H2 H N N 187 LEU HA H N N 188 LEU HB2 H N N 189 LEU HB3 H N N 190 LEU HG H N N 191 LEU HD11 H N N 192 LEU HD12 H N N 193 LEU HD13 H N N 194 LEU HD21 H N N 195 LEU HD22 H N N 196 LEU HD23 H N N 197 LEU HXT H N N 198 LYS N N N N 199 LYS CA C N S 200 LYS C C N N 201 LYS O O N N 202 LYS CB C N N 203 LYS CG C N N 204 LYS CD C N N 205 LYS CE C N N 206 LYS NZ N N N 207 LYS OXT O N N 208 LYS H H N N 209 LYS H2 H N N 210 LYS HA H N N 211 LYS HB2 H N N 212 LYS HB3 H N N 213 LYS HG2 H N N 214 LYS HG3 H N N 215 LYS HD2 H N N 216 LYS HD3 H N N 217 LYS HE2 H N N 218 LYS HE3 H N N 219 LYS HZ1 H N N 220 LYS HZ2 H N N 221 LYS HZ3 H N N 222 LYS HXT H N N 223 MET N N N N 224 MET CA C N S 225 MET C C N N 226 MET O O N N 227 MET CB C N N 228 MET CG C N N 229 MET SD S N N 230 MET CE C N N 231 MET OXT O N N 232 MET H H N N 233 MET H2 H N N 234 MET HA H N N 235 MET HB2 H N N 236 MET HB3 H N N 237 MET HG2 H N N 238 MET HG3 H N N 239 MET HE1 H N N 240 MET HE2 H N N 241 MET HE3 H N N 242 MET HXT H N N 243 PHE N N N N 244 PHE CA C N S 245 PHE C C N N 246 PHE O O N N 247 PHE CB C N N 248 PHE CG C Y N 249 PHE CD1 C Y N 250 PHE CD2 C Y N 251 PHE CE1 C Y N 252 PHE CE2 C Y N 253 PHE CZ C Y N 254 PHE OXT O N N 255 PHE H H N N 256 PHE H2 H N N 257 PHE HA H N N 258 PHE HB2 H N N 259 PHE HB3 H N N 260 PHE HD1 H N N 261 PHE HD2 H N N 262 PHE HE1 H N N 263 PHE HE2 H N N 264 PHE HZ H N N 265 PHE HXT H N N 266 SER N N N N 267 SER CA C N S 268 SER C C N N 269 SER O O N N 270 SER CB C N N 271 SER OG O N N 272 SER OXT O N N 273 SER H H N N 274 SER H2 H N N 275 SER HA H N N 276 SER HB2 H N N 277 SER HB3 H N N 278 SER HG H N N 279 SER HXT H N N 280 THR N N N N 281 THR CA C N S 282 THR C C N N 283 THR O O N N 284 THR CB C N R 285 THR OG1 O N N 286 THR CG2 C N N 287 THR OXT O N N 288 THR H H N N 289 THR H2 H N N 290 THR HA H N N 291 THR HB H N N 292 THR HG1 H N N 293 THR HG21 H N N 294 THR HG22 H N N 295 THR HG23 H N N 296 THR HXT H N N 297 TYR N N N N 298 TYR CA C N S 299 TYR C C N N 300 TYR O O N N 301 TYR CB C N N 302 TYR CG C Y N 303 TYR CD1 C Y N 304 TYR CD2 C Y N 305 TYR CE1 C Y N 306 TYR CE2 C Y N 307 TYR CZ C Y N 308 TYR OH O N N 309 TYR OXT O N N 310 TYR H H N N 311 TYR H2 H N N 312 TYR HA H N N 313 TYR HB2 H N N 314 TYR HB3 H N N 315 TYR HD1 H N N 316 TYR HD2 H N N 317 TYR HE1 H N N 318 TYR HE2 H N N 319 TYR HH H N N 320 TYR HXT H N N 321 VAL N N N N 322 VAL CA C N S 323 VAL C C N N 324 VAL O O N N 325 VAL CB C N N 326 VAL CG1 C N N 327 VAL CG2 C N N 328 VAL OXT O N N 329 VAL H H N N 330 VAL H2 H N N 331 VAL HA H N N 332 VAL HB H N N 333 VAL HG11 H N N 334 VAL HG12 H N N 335 VAL HG13 H N N 336 VAL HG21 H N N 337 VAL HG22 H N N 338 VAL HG23 H N N 339 VAL HXT H N N 340 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 BME C1 C2 sing N N 54 BME C1 O1 sing N N 55 BME C1 H11 sing N N 56 BME C1 H12 sing N N 57 BME C2 S2 sing N N 58 BME C2 H21 sing N N 59 BME C2 H22 sing N N 60 BME O1 HO1 sing N N 61 BME S2 HS2 sing N N 62 CYS N CA sing N N 63 CYS N H sing N N 64 CYS N H2 sing N N 65 CYS CA C sing N N 66 CYS CA CB sing N N 67 CYS CA HA sing N N 68 CYS C O doub N N 69 CYS C OXT sing N N 70 CYS CB SG sing N N 71 CYS CB HB2 sing N N 72 CYS CB HB3 sing N N 73 CYS SG HG sing N N 74 CYS OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 HIS N CA sing N N 122 HIS N H sing N N 123 HIS N H2 sing N N 124 HIS CA C sing N N 125 HIS CA CB sing N N 126 HIS CA HA sing N N 127 HIS C O doub N N 128 HIS C OXT sing N N 129 HIS CB CG sing N N 130 HIS CB HB2 sing N N 131 HIS CB HB3 sing N N 132 HIS CG ND1 sing Y N 133 HIS CG CD2 doub Y N 134 HIS ND1 CE1 doub Y N 135 HIS ND1 HD1 sing N N 136 HIS CD2 NE2 sing Y N 137 HIS CD2 HD2 sing N N 138 HIS CE1 NE2 sing Y N 139 HIS CE1 HE1 sing N N 140 HIS NE2 HE2 sing N N 141 HIS OXT HXT sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 ILE N CA sing N N 145 ILE N H sing N N 146 ILE N H2 sing N N 147 ILE CA C sing N N 148 ILE CA CB sing N N 149 ILE CA HA sing N N 150 ILE C O doub N N 151 ILE C OXT sing N N 152 ILE CB CG1 sing N N 153 ILE CB CG2 sing N N 154 ILE CB HB sing N N 155 ILE CG1 CD1 sing N N 156 ILE CG1 HG12 sing N N 157 ILE CG1 HG13 sing N N 158 ILE CG2 HG21 sing N N 159 ILE CG2 HG22 sing N N 160 ILE CG2 HG23 sing N N 161 ILE CD1 HD11 sing N N 162 ILE CD1 HD12 sing N N 163 ILE CD1 HD13 sing N N 164 ILE OXT HXT sing N N 165 LEU N CA sing N N 166 LEU N H sing N N 167 LEU N H2 sing N N 168 LEU CA C sing N N 169 LEU CA CB sing N N 170 LEU CA HA sing N N 171 LEU C O doub N N 172 LEU C OXT sing N N 173 LEU CB CG sing N N 174 LEU CB HB2 sing N N 175 LEU CB HB3 sing N N 176 LEU CG CD1 sing N N 177 LEU CG CD2 sing N N 178 LEU CG HG sing N N 179 LEU CD1 HD11 sing N N 180 LEU CD1 HD12 sing N N 181 LEU CD1 HD13 sing N N 182 LEU CD2 HD21 sing N N 183 LEU CD2 HD22 sing N N 184 LEU CD2 HD23 sing N N 185 LEU OXT HXT sing N N 186 LYS N CA sing N N 187 LYS N H sing N N 188 LYS N H2 sing N N 189 LYS CA C sing N N 190 LYS CA CB sing N N 191 LYS CA HA sing N N 192 LYS C O doub N N 193 LYS C OXT sing N N 194 LYS CB CG sing N N 195 LYS CB HB2 sing N N 196 LYS CB HB3 sing N N 197 LYS CG CD sing N N 198 LYS CG HG2 sing N N 199 LYS CG HG3 sing N N 200 LYS CD CE sing N N 201 LYS CD HD2 sing N N 202 LYS CD HD3 sing N N 203 LYS CE NZ sing N N 204 LYS CE HE2 sing N N 205 LYS CE HE3 sing N N 206 LYS NZ HZ1 sing N N 207 LYS NZ HZ2 sing N N 208 LYS NZ HZ3 sing N N 209 LYS OXT HXT sing N N 210 MET N CA sing N N 211 MET N H sing N N 212 MET N H2 sing N N 213 MET CA C sing N N 214 MET CA CB sing N N 215 MET CA HA sing N N 216 MET C O doub N N 217 MET C OXT sing N N 218 MET CB CG sing N N 219 MET CB HB2 sing N N 220 MET CB HB3 sing N N 221 MET CG SD sing N N 222 MET CG HG2 sing N N 223 MET CG HG3 sing N N 224 MET SD CE sing N N 225 MET CE HE1 sing N N 226 MET CE HE2 sing N N 227 MET CE HE3 sing N N 228 MET OXT HXT sing N N 229 PHE N CA sing N N 230 PHE N H sing N N 231 PHE N H2 sing N N 232 PHE CA C sing N N 233 PHE CA CB sing N N 234 PHE CA HA sing N N 235 PHE C O doub N N 236 PHE C OXT sing N N 237 PHE CB CG sing N N 238 PHE CB HB2 sing N N 239 PHE CB HB3 sing N N 240 PHE CG CD1 doub Y N 241 PHE CG CD2 sing Y N 242 PHE CD1 CE1 sing Y N 243 PHE CD1 HD1 sing N N 244 PHE CD2 CE2 doub Y N 245 PHE CD2 HD2 sing N N 246 PHE CE1 CZ doub Y N 247 PHE CE1 HE1 sing N N 248 PHE CE2 CZ sing Y N 249 PHE CE2 HE2 sing N N 250 PHE CZ HZ sing N N 251 PHE OXT HXT sing N N 252 SER N CA sing N N 253 SER N H sing N N 254 SER N H2 sing N N 255 SER CA C sing N N 256 SER CA CB sing N N 257 SER CA HA sing N N 258 SER C O doub N N 259 SER C OXT sing N N 260 SER CB OG sing N N 261 SER CB HB2 sing N N 262 SER CB HB3 sing N N 263 SER OG HG sing N N 264 SER OXT HXT sing N N 265 THR N CA sing N N 266 THR N H sing N N 267 THR N H2 sing N N 268 THR CA C sing N N 269 THR CA CB sing N N 270 THR CA HA sing N N 271 THR C O doub N N 272 THR C OXT sing N N 273 THR CB OG1 sing N N 274 THR CB CG2 sing N N 275 THR CB HB sing N N 276 THR OG1 HG1 sing N N 277 THR CG2 HG21 sing N N 278 THR CG2 HG22 sing N N 279 THR CG2 HG23 sing N N 280 THR OXT HXT sing N N 281 TYR N CA sing N N 282 TYR N H sing N N 283 TYR N H2 sing N N 284 TYR CA C sing N N 285 TYR CA CB sing N N 286 TYR CA HA sing N N 287 TYR C O doub N N 288 TYR C OXT sing N N 289 TYR CB CG sing N N 290 TYR CB HB2 sing N N 291 TYR CB HB3 sing N N 292 TYR CG CD1 doub Y N 293 TYR CG CD2 sing Y N 294 TYR CD1 CE1 sing Y N 295 TYR CD1 HD1 sing N N 296 TYR CD2 CE2 doub Y N 297 TYR CD2 HD2 sing N N 298 TYR CE1 CZ doub Y N 299 TYR CE1 HE1 sing N N 300 TYR CE2 CZ sing Y N 301 TYR CE2 HE2 sing N N 302 TYR CZ OH sing N N 303 TYR OH HH sing N N 304 TYR OXT HXT sing N N 305 VAL N CA sing N N 306 VAL N H sing N N 307 VAL N H2 sing N N 308 VAL CA C sing N N 309 VAL CA CB sing N N 310 VAL CA HA sing N N 311 VAL C O doub N N 312 VAL C OXT sing N N 313 VAL CB CG1 sing N N 314 VAL CB CG2 sing N N 315 VAL CB HB sing N N 316 VAL CG1 HG11 sing N N 317 VAL CG1 HG12 sing N N 318 VAL CG1 HG13 sing N N 319 VAL CG2 HG21 sing N N 320 VAL CG2 HG22 sing N N 321 VAL CG2 HG23 sing N N 322 VAL OXT HXT sing N N 323 # _atom_sites.entry_id 4GOE _atom_sites.fract_transf_matrix[1][1] 0.033641 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022659 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015631 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_