HEADER OXIDOREDUCTASE 20-AUG-12 4GPC TITLE STRUCTURE OF THE BILIVERDIN-HMUO, HEME OXYGENASE FROM CORYNEBACTERIUM TITLE 2 DIPHTHERIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEME OXYGENASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 1.14.99.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM DIPHTHERIAE; SOURCE 3 ORGANISM_TAXID: 1717; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HELIX, HEME DEGRADATION, HEME, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.UNNO,M.IKEDA-SAITO REVDAT 3 20-MAR-24 4GPC 1 HETSYN REVDAT 2 29-JUL-20 4GPC 1 REMARK SITE REVDAT 1 21-AUG-13 4GPC 0 JRNL AUTH M.UNNO,A.ARDEVOL,C.ROVIRA,M.IKEDA-SAITO JRNL TITL CRYSTAL STRUCTURES OF THE SUBSTRATE-FREE AND THE JRNL TITL 2 PRODUCT-BOUND FORMS OF HMUO, A HEME OXYGENASE FROM JRNL TITL 3 CORYNEBACTERIUM DIPHTHERIAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 57650 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3066 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4187 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.1910 REMARK 3 BIN FREE R VALUE SET COUNT : 215 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5008 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 171 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.30000 REMARK 3 B22 (A**2) : 0.60000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.38000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.127 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.645 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5307 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7189 ; 1.796 ; 1.988 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 628 ; 4.775 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 275 ;31.533 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 881 ;14.061 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;14.776 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 761 ; 0.220 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4120 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2664 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3603 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 435 ; 0.133 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 83 ; 0.198 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.139 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3214 ; 0.902 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4971 ; 1.346 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2412 ; 2.486 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2218 ; 3.823 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 215 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7640 0.5130 -0.1020 REMARK 3 T TENSOR REMARK 3 T11: -0.0570 T22: -0.0527 REMARK 3 T33: -0.0844 T12: 0.0260 REMARK 3 T13: 0.0225 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 1.4115 L22: 2.1787 REMARK 3 L33: 1.7282 L12: 0.1371 REMARK 3 L13: 0.5797 L23: 0.2625 REMARK 3 S TENSOR REMARK 3 S11: 0.1597 S12: 0.0639 S13: -0.0835 REMARK 3 S21: -0.0304 S22: -0.1755 S23: 0.0521 REMARK 3 S31: -0.0083 S32: 0.0442 S33: 0.0158 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 305 B 515 REMARK 3 ORIGIN FOR THE GROUP (A): 7.7520 16.3380 27.1800 REMARK 3 T TENSOR REMARK 3 T11: -0.0426 T22: 0.0142 REMARK 3 T33: -0.0732 T12: 0.0039 REMARK 3 T13: 0.0328 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.5164 L22: 0.9420 REMARK 3 L33: 0.8922 L12: 0.5580 REMARK 3 L13: -0.1465 L23: 0.0699 REMARK 3 S TENSOR REMARK 3 S11: -0.0491 S12: 0.1435 S13: -0.0261 REMARK 3 S21: -0.1225 S22: 0.0969 S23: -0.0021 REMARK 3 S31: -0.0867 S32: -0.0583 S33: -0.0478 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 606 C 813 REMARK 3 ORIGIN FOR THE GROUP (A): 29.4260 6.0860 51.6000 REMARK 3 T TENSOR REMARK 3 T11: -0.0563 T22: 0.0264 REMARK 3 T33: -0.0444 T12: 0.0029 REMARK 3 T13: 0.0185 T23: 0.0391 REMARK 3 L TENSOR REMARK 3 L11: 1.3472 L22: 0.5692 REMARK 3 L33: 0.8390 L12: -0.1845 REMARK 3 L13: -0.2469 L23: -0.3582 REMARK 3 S TENSOR REMARK 3 S11: -0.0755 S12: -0.1854 S13: -0.0243 REMARK 3 S21: 0.0923 S22: -0.0486 S23: -0.0802 REMARK 3 S31: -0.0091 S32: 0.0989 S33: 0.1241 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 901 A 901 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8620 -9.4480 0.5820 REMARK 3 T TENSOR REMARK 3 T11: -0.0005 T22: 0.0018 REMARK 3 T33: 0.0014 T12: -0.0052 REMARK 3 T13: 0.0036 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 65.5307 L22: 41.6781 REMARK 3 L33: 18.2624 L12: 7.6660 REMARK 3 L13: 25.2740 L23: 16.3391 REMARK 3 S TENSOR REMARK 3 S11: 1.0850 S12: 1.4467 S13: -2.3880 REMARK 3 S21: -0.9216 S22: 0.4595 S23: -0.7800 REMARK 3 S31: 1.2137 S32: 0.0533 S33: -1.5444 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 601 B 601 REMARK 3 ORIGIN FOR THE GROUP (A): 5.7730 18.8040 17.4310 REMARK 3 T TENSOR REMARK 3 T11: -0.0015 T22: 0.0005 REMARK 3 T33: 0.0009 T12: 0.0009 REMARK 3 T13: 0.0028 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 20.3682 L22: 27.1284 REMARK 3 L33: 67.9346 L12: 19.5218 REMARK 3 L13: 20.7495 L23: 13.4618 REMARK 3 S TENSOR REMARK 3 S11: -1.0733 S12: 0.8673 S13: 0.7683 REMARK 3 S21: -2.3946 S22: 0.6166 S23: -0.4078 REMARK 3 S31: -1.5385 S32: 2.2010 S33: 0.4566 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 901 C 901 REMARK 3 ORIGIN FOR THE GROUP (A): 31.6660 0.9590 59.8460 REMARK 3 T TENSOR REMARK 3 T11: -0.0586 T22: 0.0114 REMARK 3 T33: -0.0440 T12: -0.0288 REMARK 3 T13: 0.0485 T23: 0.0522 REMARK 3 L TENSOR REMARK 3 L11: 17.3377 L22: 7.2385 REMARK 3 L33: 11.0416 L12: 0.4090 REMARK 3 L13: 1.6144 L23: -5.0564 REMARK 3 S TENSOR REMARK 3 S11: 0.3664 S12: -0.3097 S13: -0.0979 REMARK 3 S21: -0.2345 S22: -0.5470 S23: 0.5395 REMARK 3 S31: 0.5561 S32: -0.0737 S33: 0.1806 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4GPC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074470. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60735 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, MES, PH 6.1, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 303K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.54550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 MET B 301 REMARK 465 THR B 302 REMARK 465 THR B 303 REMARK 465 ALA B 304 REMARK 465 MET C 601 REMARK 465 THR C 602 REMARK 465 THR C 603 REMARK 465 ALA C 604 REMARK 465 THR C 605 REMARK 465 GLY C 814 REMARK 465 LEU C 815 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 5 OG1 CG2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 THR B 305 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 37 -127.32 -104.70 REMARK 500 ALA A 167 -73.68 -82.58 REMARK 500 LEU B 337 -126.45 -106.56 REMARK 500 LEU C 637 -130.47 -104.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1IW0 RELATED DB: PDB REMARK 900 RELATED ID: 1IW1 RELATED DB: PDB REMARK 900 RELATED ID: 4GOH RELATED DB: PDB REMARK 900 RELATED ID: 4GPF RELATED DB: PDB REMARK 900 RELATED ID: 4GPH RELATED DB: PDB DBREF 4GPC A 1 215 UNP Q54AI1 Q54AI1_CORDP 1 215 DBREF 4GPC B 301 515 UNP Q54AI1 Q54AI1_CORDP 1 215 DBREF 4GPC C 601 815 UNP Q54AI1 Q54AI1_CORDP 1 215 SEQRES 1 A 215 MET THR THR ALA THR ALA GLY LEU ALA VAL GLU LEU LYS SEQRES 2 A 215 GLN SER THR ALA GLN ALA HIS GLU LYS ALA GLU HIS SER SEQRES 3 A 215 THR PHE MET SER ASP LEU LEU LYS GLY ARG LEU GLY VAL SEQRES 4 A 215 ALA GLU PHE THR ARG LEU GLN GLU GLN ALA TRP LEU PHE SEQRES 5 A 215 TYR THR ALA LEU GLU GLN ALA VAL ASP ALA VAL ARG ALA SEQRES 6 A 215 SER GLY PHE ALA GLU SER LEU LEU ASP PRO ALA LEU ASN SEQRES 7 A 215 ARG ALA GLU VAL LEU ALA ARG ASP LEU ASP LYS LEU ASN SEQRES 8 A 215 GLY SER SER GLU TRP ARG SER ARG ILE THR ALA SER PRO SEQRES 9 A 215 ALA VAL ILE ASP TYR VAL ASN ARG LEU GLU GLU ILE ARG SEQRES 10 A 215 ASP ASN VAL ASP GLY PRO ALA LEU VAL ALA HIS HIS TYR SEQRES 11 A 215 VAL ARG TYR LEU GLY ASP LEU SER GLY GLY GLN VAL ILE SEQRES 12 A 215 ALA ARG MET MET GLN ARG HIS TYR GLY VAL ASP PRO GLU SEQRES 13 A 215 ALA LEU GLY PHE TYR HIS PHE GLU GLY ILE ALA LYS LEU SEQRES 14 A 215 LYS VAL TYR LYS ASP GLU TYR ARG GLU LYS LEU ASN ASN SEQRES 15 A 215 LEU GLU LEU SER ASP GLU GLN ARG GLU HIS LEU LEU LYS SEQRES 16 A 215 GLU ALA THR ASP ALA PHE VAL PHE ASN HIS GLN VAL PHE SEQRES 17 A 215 ALA ASP LEU GLY LYS GLY LEU SEQRES 1 B 215 MET THR THR ALA THR ALA GLY LEU ALA VAL GLU LEU LYS SEQRES 2 B 215 GLN SER THR ALA GLN ALA HIS GLU LYS ALA GLU HIS SER SEQRES 3 B 215 THR PHE MET SER ASP LEU LEU LYS GLY ARG LEU GLY VAL SEQRES 4 B 215 ALA GLU PHE THR ARG LEU GLN GLU GLN ALA TRP LEU PHE SEQRES 5 B 215 TYR THR ALA LEU GLU GLN ALA VAL ASP ALA VAL ARG ALA SEQRES 6 B 215 SER GLY PHE ALA GLU SER LEU LEU ASP PRO ALA LEU ASN SEQRES 7 B 215 ARG ALA GLU VAL LEU ALA ARG ASP LEU ASP LYS LEU ASN SEQRES 8 B 215 GLY SER SER GLU TRP ARG SER ARG ILE THR ALA SER PRO SEQRES 9 B 215 ALA VAL ILE ASP TYR VAL ASN ARG LEU GLU GLU ILE ARG SEQRES 10 B 215 ASP ASN VAL ASP GLY PRO ALA LEU VAL ALA HIS HIS TYR SEQRES 11 B 215 VAL ARG TYR LEU GLY ASP LEU SER GLY GLY GLN VAL ILE SEQRES 12 B 215 ALA ARG MET MET GLN ARG HIS TYR GLY VAL ASP PRO GLU SEQRES 13 B 215 ALA LEU GLY PHE TYR HIS PHE GLU GLY ILE ALA LYS LEU SEQRES 14 B 215 LYS VAL TYR LYS ASP GLU TYR ARG GLU LYS LEU ASN ASN SEQRES 15 B 215 LEU GLU LEU SER ASP GLU GLN ARG GLU HIS LEU LEU LYS SEQRES 16 B 215 GLU ALA THR ASP ALA PHE VAL PHE ASN HIS GLN VAL PHE SEQRES 17 B 215 ALA ASP LEU GLY LYS GLY LEU SEQRES 1 C 215 MET THR THR ALA THR ALA GLY LEU ALA VAL GLU LEU LYS SEQRES 2 C 215 GLN SER THR ALA GLN ALA HIS GLU LYS ALA GLU HIS SER SEQRES 3 C 215 THR PHE MET SER ASP LEU LEU LYS GLY ARG LEU GLY VAL SEQRES 4 C 215 ALA GLU PHE THR ARG LEU GLN GLU GLN ALA TRP LEU PHE SEQRES 5 C 215 TYR THR ALA LEU GLU GLN ALA VAL ASP ALA VAL ARG ALA SEQRES 6 C 215 SER GLY PHE ALA GLU SER LEU LEU ASP PRO ALA LEU ASN SEQRES 7 C 215 ARG ALA GLU VAL LEU ALA ARG ASP LEU ASP LYS LEU ASN SEQRES 8 C 215 GLY SER SER GLU TRP ARG SER ARG ILE THR ALA SER PRO SEQRES 9 C 215 ALA VAL ILE ASP TYR VAL ASN ARG LEU GLU GLU ILE ARG SEQRES 10 C 215 ASP ASN VAL ASP GLY PRO ALA LEU VAL ALA HIS HIS TYR SEQRES 11 C 215 VAL ARG TYR LEU GLY ASP LEU SER GLY GLY GLN VAL ILE SEQRES 12 C 215 ALA ARG MET MET GLN ARG HIS TYR GLY VAL ASP PRO GLU SEQRES 13 C 215 ALA LEU GLY PHE TYR HIS PHE GLU GLY ILE ALA LYS LEU SEQRES 14 C 215 LYS VAL TYR LYS ASP GLU TYR ARG GLU LYS LEU ASN ASN SEQRES 15 C 215 LEU GLU LEU SER ASP GLU GLN ARG GLU HIS LEU LEU LYS SEQRES 16 C 215 GLU ALA THR ASP ALA PHE VAL PHE ASN HIS GLN VAL PHE SEQRES 17 C 215 ALA ASP LEU GLY LYS GLY LEU HET BLA A 901 43 HET SO4 A 902 5 HET SO4 A 903 5 HET BLA B 601 43 HET SO4 B 602 5 HET SO4 B 603 5 HET SO4 B 604 5 HET BLA C 901 43 HET ASC C 902 12 HET SO4 C 903 5 HETNAM BLA BILIVERDINE IX ALPHA HETNAM SO4 SULFATE ION HETNAM ASC ASCORBIC ACID HETSYN ASC VITAMIN C FORMUL 4 BLA 3(C33 H34 N4 O6) FORMUL 5 SO4 6(O4 S 2-) FORMUL 12 ASC C6 H8 O6 FORMUL 14 HOH *425(H2 O) HELIX 1 1 GLY A 7 THR A 16 1 10 HELIX 2 2 THR A 16 HIS A 25 1 10 HELIX 3 3 SER A 26 LYS A 34 1 9 HELIX 4 4 GLY A 38 GLY A 67 1 30 HELIX 5 5 ASP A 74 ASN A 78 5 5 HELIX 6 6 ARG A 79 GLY A 92 1 14 HELIX 7 7 GLU A 95 ILE A 100 1 6 HELIX 8 8 SER A 103 VAL A 120 1 18 HELIX 9 9 ASP A 121 GLY A 152 1 32 HELIX 10 10 ASP A 154 ALA A 157 5 4 HELIX 11 11 LEU A 158 PHE A 163 1 6 HELIX 12 12 LYS A 168 LEU A 183 1 16 HELIX 13 13 SER A 186 LYS A 213 1 28 HELIX 14 14 GLY B 307 THR B 316 1 10 HELIX 15 15 THR B 316 HIS B 325 1 10 HELIX 16 16 SER B 326 LYS B 334 1 9 HELIX 17 17 GLY B 338 SER B 366 1 29 HELIX 18 18 ASP B 374 ASN B 378 5 5 HELIX 19 19 ARG B 379 GLY B 392 1 14 HELIX 20 20 SER B 394 ARG B 399 5 6 HELIX 21 21 SER B 403 VAL B 420 1 18 HELIX 22 22 ASP B 421 GLY B 452 1 32 HELIX 23 23 ASP B 454 HIS B 462 5 9 HELIX 24 24 LYS B 468 LEU B 483 1 16 HELIX 25 25 SER B 486 GLY B 514 1 29 HELIX 26 26 GLY C 607 THR C 616 1 10 HELIX 27 27 THR C 616 HIS C 625 1 10 HELIX 28 28 SER C 626 LYS C 634 1 9 HELIX 29 29 GLY C 638 SER C 666 1 29 HELIX 30 30 ASP C 674 ASN C 678 5 5 HELIX 31 31 ARG C 679 GLY C 692 1 14 HELIX 32 32 SER C 694 ARG C 699 5 6 HELIX 33 33 SER C 703 VAL C 720 1 18 HELIX 34 34 ASP C 721 GLY C 752 1 32 HELIX 35 35 ASP C 754 HIS C 762 5 9 HELIX 36 36 LYS C 768 LEU C 783 1 16 HELIX 37 37 SER C 786 LYS C 813 1 28 CRYST1 54.114 63.091 107.558 90.00 100.73 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018480 0.000000 0.003502 0.00000 SCALE2 0.000000 0.015850 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009463 0.00000