data_4GSO # _entry.id 4GSO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4GSO RCSB RCSB074586 WWPDB D_1000074586 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GSO _pdbx_database_status.recvd_initial_deposition_date 2012-08-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ullah, A.' 1 'Souza, T.C.A.B.' 2 'Zanphorlin, L.M.' 3 'Mariutti, R.' 4 'Sanata, S.V.' 5 'Murakami, M.T.' 6 'Arni, R.K.' 7 # _citation.id primary _citation.title ;Crystal structure of Jararacussin-I: The highly negatively charged catalytic interface contributes to macromolecular selectivity in snake venom thrombin-like enzymes. ; _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 22 _citation.page_first 128 _citation.page_last 132 _citation.year 2013 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23139169 _citation.pdbx_database_id_DOI 10.1002/pro.2189 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ullah, A.' 1 primary 'Souza, T.A.' 2 primary 'Zanphorlin, L.M.' 3 primary 'Mariutti, R.B.' 4 primary 'Santana, V.S.' 5 primary 'Murakami, M.T.' 6 primary 'Arni, R.K.' 7 # _cell.entry_id 4GSO _cell.length_a 84.533 _cell.length_b 84.533 _cell.length_c 80.243 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GSO _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Thrombin-like enzyme BjussuSP-1' 25183.447 1 3.4.21.- ? ? ? 2 water nat water 18.015 7 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;SVTLE BjussuSP-1, Fibrinogen-clotting enzyme, Snake venom serine protease 1, SVSP, Thrombin-like enzyme BjussuSP-I, SVTLE BjussuSP-I ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;VLGGDECDINEHPFLAFLYSHGYFCGLTLINQEWVVTAAHCDSTNFQMQLGVHSKKVLNEDEQTRNPKEKFICPNKNMSE VLDKDIMLIKLDKPISNSKHIAPLSLPSNPPSVGSVCRIMGWGSITIPNETYPDVPYCANINLVDYEVCQGAYNGLPAKT TLCAGVLEGGKDTCVGDSGGPLICNGQFQGIVSYGAHSCGQGPKPGIYTNVFDYTDWIQRNIAGNTDATCPP ; _entity_poly.pdbx_seq_one_letter_code_can ;VLGGDECDINEHPFLAFLYSHGYFCGLTLINQEWVVTAAHCDSTNFQMQLGVHSKKVLNEDEQTRNPKEKFICPNKNMSE VLDKDIMLIKLDKPISNSKHIAPLSLPSNPPSVGSVCRIMGWGSITIPNETYPDVPYCANINLVDYEVCQGAYNGLPAKT TLCAGVLEGGKDTCVGDSGGPLICNGQFQGIVSYGAHSCGQGPKPGIYTNVFDYTDWIQRNIAGNTDATCPP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 LEU n 1 3 GLY n 1 4 GLY n 1 5 ASP n 1 6 GLU n 1 7 CYS n 1 8 ASP n 1 9 ILE n 1 10 ASN n 1 11 GLU n 1 12 HIS n 1 13 PRO n 1 14 PHE n 1 15 LEU n 1 16 ALA n 1 17 PHE n 1 18 LEU n 1 19 TYR n 1 20 SER n 1 21 HIS n 1 22 GLY n 1 23 TYR n 1 24 PHE n 1 25 CYS n 1 26 GLY n 1 27 LEU n 1 28 THR n 1 29 LEU n 1 30 ILE n 1 31 ASN n 1 32 GLN n 1 33 GLU n 1 34 TRP n 1 35 VAL n 1 36 VAL n 1 37 THR n 1 38 ALA n 1 39 ALA n 1 40 HIS n 1 41 CYS n 1 42 ASP n 1 43 SER n 1 44 THR n 1 45 ASN n 1 46 PHE n 1 47 GLN n 1 48 MET n 1 49 GLN n 1 50 LEU n 1 51 GLY n 1 52 VAL n 1 53 HIS n 1 54 SER n 1 55 LYS n 1 56 LYS n 1 57 VAL n 1 58 LEU n 1 59 ASN n 1 60 GLU n 1 61 ASP n 1 62 GLU n 1 63 GLN n 1 64 THR n 1 65 ARG n 1 66 ASN n 1 67 PRO n 1 68 LYS n 1 69 GLU n 1 70 LYS n 1 71 PHE n 1 72 ILE n 1 73 CYS n 1 74 PRO n 1 75 ASN n 1 76 LYS n 1 77 ASN n 1 78 MET n 1 79 SER n 1 80 GLU n 1 81 VAL n 1 82 LEU n 1 83 ASP n 1 84 LYS n 1 85 ASP n 1 86 ILE n 1 87 MET n 1 88 LEU n 1 89 ILE n 1 90 LYS n 1 91 LEU n 1 92 ASP n 1 93 LYS n 1 94 PRO n 1 95 ILE n 1 96 SER n 1 97 ASN n 1 98 SER n 1 99 LYS n 1 100 HIS n 1 101 ILE n 1 102 ALA n 1 103 PRO n 1 104 LEU n 1 105 SER n 1 106 LEU n 1 107 PRO n 1 108 SER n 1 109 ASN n 1 110 PRO n 1 111 PRO n 1 112 SER n 1 113 VAL n 1 114 GLY n 1 115 SER n 1 116 VAL n 1 117 CYS n 1 118 ARG n 1 119 ILE n 1 120 MET n 1 121 GLY n 1 122 TRP n 1 123 GLY n 1 124 SER n 1 125 ILE n 1 126 THR n 1 127 ILE n 1 128 PRO n 1 129 ASN n 1 130 GLU n 1 131 THR n 1 132 TYR n 1 133 PRO n 1 134 ASP n 1 135 VAL n 1 136 PRO n 1 137 TYR n 1 138 CYS n 1 139 ALA n 1 140 ASN n 1 141 ILE n 1 142 ASN n 1 143 LEU n 1 144 VAL n 1 145 ASP n 1 146 TYR n 1 147 GLU n 1 148 VAL n 1 149 CYS n 1 150 GLN n 1 151 GLY n 1 152 ALA n 1 153 TYR n 1 154 ASN n 1 155 GLY n 1 156 LEU n 1 157 PRO n 1 158 ALA n 1 159 LYS n 1 160 THR n 1 161 THR n 1 162 LEU n 1 163 CYS n 1 164 ALA n 1 165 GLY n 1 166 VAL n 1 167 LEU n 1 168 GLU n 1 169 GLY n 1 170 GLY n 1 171 LYS n 1 172 ASP n 1 173 THR n 1 174 CYS n 1 175 VAL n 1 176 GLY n 1 177 ASP n 1 178 SER n 1 179 GLY n 1 180 GLY n 1 181 PRO n 1 182 LEU n 1 183 ILE n 1 184 CYS n 1 185 ASN n 1 186 GLY n 1 187 GLN n 1 188 PHE n 1 189 GLN n 1 190 GLY n 1 191 ILE n 1 192 VAL n 1 193 SER n 1 194 TYR n 1 195 GLY n 1 196 ALA n 1 197 HIS n 1 198 SER n 1 199 CYS n 1 200 GLY n 1 201 GLN n 1 202 GLY n 1 203 PRO n 1 204 LYS n 1 205 PRO n 1 206 GLY n 1 207 ILE n 1 208 TYR n 1 209 THR n 1 210 ASN n 1 211 VAL n 1 212 PHE n 1 213 ASP n 1 214 TYR n 1 215 THR n 1 216 ASP n 1 217 TRP n 1 218 ILE n 1 219 GLN n 1 220 ARG n 1 221 ASN n 1 222 ILE n 1 223 ALA n 1 224 GLY n 1 225 ASN n 1 226 THR n 1 227 ASP n 1 228 ALA n 1 229 THR n 1 230 CYS n 1 231 PRO n 1 232 PRO n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name Jararacussu _entity_src_nat.pdbx_organism_scientific 'Bothrops jararacussu' _entity_src_nat.pdbx_ncbi_taxonomy_id 8726 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VSP1_BOTJR _struct_ref.pdbx_db_accession Q2PQJ3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VLGGDECDINEHPFLAFLYSHGYFCGLTLINQEWVVTAAHCDSTNFQMQLGVHSKKVLNEDEQTRNPKEKFICPNKNMSE VLDKDIMLIKLDKPISNSKHIAPLSLPSNPPSVGSVCRIMGWGSITIPNETYPDVPYCANINLVDYEVCQGAYNGLPAKT TLCAGVLEGGKDTCVGDSGGPLICNGQFQGIVSYGAHSCGQGPKPGIYTNVFDYTDWIQRNIAGNTDATCPP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4GSO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 232 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q2PQJ3 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 232 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 232 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GSO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.85 _exptl_crystal.density_percent_sol 56.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.7 _exptl_crystal_grow.pdbx_details '0.1 M MES pH 6.7 and 30% PEG 550 MME, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.458 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'LNLS BEAMLINE W01B-MX2' _diffrn_source.pdbx_synchrotron_site LNLS _diffrn_source.pdbx_synchrotron_beamline W01B-MX2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.458 # _reflns.entry_id 4GSO _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 59.78 _reflns.d_resolution_high 2.60 _reflns.number_obs 8066 _reflns.number_all 8380 _reflns.percent_possible_obs 96.25 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 91 _reflns_shell.Rmerge_I_obs 0.339 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 864 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4GSO _refine.ls_number_reflns_obs 8066 _refine.ls_number_reflns_all 8380 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 59.78 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 96.25 _refine.ls_R_factor_obs 0.21844 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21592 _refine.ls_R_factor_R_free 0.26852 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.7 _refine.ls_number_reflns_R_free 397 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.904 _refine.correlation_coeff_Fo_to_Fc_free 0.845 _refine.B_iso_mean 42.930 _refine.aniso_B[1][1] -20.18 _refine.aniso_B[2][2] -20.18 _refine.aniso_B[3][3] 40.36 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.164 _refine.pdbx_overall_ESU_R_Free 0.071 _refine.overall_SU_ML 0.335 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 17.034 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1762 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 7 _refine_hist.number_atoms_total 1769 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 59.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.009 0.022 ? 1812 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.366 1.959 ? 2474 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.986 5.000 ? 231 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 38.955 26.026 ? 78 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 21.624 15.000 ? 283 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 7.182 15.000 ? 3 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.091 0.200 ? 270 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.007 0.021 ? 1398 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.350 1.500 ? 1154 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 0.672 2.000 ? 1870 ? 'X-RAY DIFFRACTION' r_scbond_it 0.994 3.000 ? 658 ? 'X-RAY DIFFRACTION' r_scangle_it 1.678 4.500 ? 604 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.597 _refine_ls_shell.d_res_low 2.664 _refine_ls_shell.number_reflns_R_work 548 _refine_ls_shell.R_factor_R_work 0.239 _refine_ls_shell.percent_reflns_obs 85.43 _refine_ls_shell.R_factor_R_free 0.532 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 15 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4GSO _struct.title 'structure of Jararacussin-I' _struct.pdbx_descriptor 'Thrombin-like enzyme BjussuSP-1 (E.C.3.4.21.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GSO _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'Thrombin-like enzyme, hydrolase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 38 ? ASP A 42 ? ALA A 38 ASP A 42 5 ? 5 HELX_P HELX_P2 2 TYR A 146 ? GLY A 151 ? TYR A 146 GLY A 151 1 ? 6 HELX_P HELX_P3 3 TYR A 214 ? GLY A 224 ? TYR A 214 GLY A 224 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 138 SG ? ? A CYS 7 A CYS 138 1_555 ? ? ? ? ? ? ? 2.040 ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 41 SG ? ? A CYS 25 A CYS 41 1_555 ? ? ? ? ? ? ? 2.011 ? disulf3 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 230 SG ? ? A CYS 73 A CYS 230 1_555 ? ? ? ? ? ? ? 2.030 ? disulf4 disulf ? ? A CYS 117 SG ? ? ? 1_555 A CYS 184 SG ? ? A CYS 117 A CYS 184 1_555 ? ? ? ? ? ? ? 2.035 ? disulf5 disulf ? ? A CYS 149 SG ? ? ? 1_555 A CYS 163 SG ? ? A CYS 149 A CYS 163 1_555 ? ? ? ? ? ? ? 2.042 ? disulf6 disulf ? ? A CYS 174 SG ? ? ? 1_555 A CYS 199 SG ? ? A CYS 174 A CYS 199 1_555 ? ? ? ? ? ? ? 2.047 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 197 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 197 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 198 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 198 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.43 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 5 ? GLU A 6 ? ASP A 5 GLU A 6 A 2 TYR A 137 ? LEU A 143 ? TYR A 137 LEU A 143 A 3 THR A 161 ? GLY A 165 ? THR A 161 GLY A 165 A 4 GLY A 206 ? ASN A 210 ? GLY A 206 ASN A 210 A 5 GLN A 187 ? TYR A 194 ? GLN A 187 TYR A 194 A 6 PRO A 181 ? CYS A 184 ? PRO A 181 CYS A 184 A 7 VAL A 116 ? GLY A 121 ? VAL A 116 GLY A 121 A 8 TYR A 137 ? LEU A 143 ? TYR A 137 LEU A 143 B 1 GLN A 63 ? ARG A 65 ? GLN A 63 ARG A 65 B 2 GLN A 47 ? LEU A 50 ? GLN A 47 LEU A 50 B 3 LEU A 15 ? TYR A 19 ? LEU A 15 TYR A 19 B 4 TYR A 23 ? LEU A 29 ? TYR A 23 LEU A 29 B 5 TRP A 34 ? THR A 37 ? TRP A 34 THR A 37 B 6 MET A 87 ? LEU A 91 ? MET A 87 LEU A 91 B 7 PRO A 67 ? ILE A 72 ? PRO A 67 ILE A 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 5 ? N ASP A 5 O CYS A 138 ? O CYS A 138 A 2 3 N ASN A 142 ? N ASN A 142 O GLY A 165 ? O GLY A 165 A 3 4 N ALA A 164 ? N ALA A 164 O GLY A 206 ? O GLY A 206 A 4 5 O ILE A 207 ? O ILE A 207 N TYR A 194 ? N TYR A 194 A 5 6 O GLN A 189 ? O GLN A 189 N LEU A 182 ? N LEU A 182 A 6 7 O ILE A 183 ? O ILE A 183 N ARG A 118 ? N ARG A 118 A 7 8 N CYS A 117 ? N CYS A 117 O ILE A 141 ? O ILE A 141 B 1 2 O GLN A 63 ? O GLN A 63 N LEU A 50 ? N LEU A 50 B 2 3 O GLN A 49 ? O GLN A 49 N PHE A 17 ? N PHE A 17 B 3 4 N LEU A 18 ? N LEU A 18 O PHE A 24 ? O PHE A 24 B 4 5 N THR A 28 ? N THR A 28 O VAL A 36 ? O VAL A 36 B 5 6 N THR A 37 ? N THR A 37 O MET A 87 ? O MET A 87 B 6 7 O LYS A 90 ? O LYS A 90 N LYS A 68 ? N LYS A 68 # _database_PDB_matrix.entry_id 4GSO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GSO _atom_sites.fract_transf_matrix[1][1] 0.011830 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011830 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012462 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 TYR 19 19 19 TYR TYR A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 TRP 34 34 34 TRP TRP A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 CYS 41 41 41 CYS CYS A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 ASP 61 61 61 ASP ASP A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 CYS 73 73 73 CYS CYS A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 MET 78 78 78 MET MET A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 LYS 90 90 90 LYS LYS A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 SER 105 105 105 SER SER A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 PRO 110 110 110 PRO PRO A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 VAL 113 113 113 VAL VAL A . n A 1 114 GLY 114 114 114 GLY GLY A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 CYS 117 117 117 CYS CYS A . n A 1 118 ARG 118 118 118 ARG ARG A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 TRP 122 122 122 TRP TRP A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 SER 124 124 124 SER SER A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 THR 126 126 126 THR THR A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 CYS 138 138 138 CYS CYS A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 CYS 149 149 149 CYS CYS A . n A 1 150 GLN 150 150 150 GLN GLN A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 TYR 153 153 153 TYR TYR A . n A 1 154 ASN 154 154 154 ASN ASN A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 PRO 157 157 157 PRO PRO A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 THR 161 161 161 THR THR A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 CYS 163 163 163 CYS CYS A . n A 1 164 ALA 164 164 164 ALA ALA A . n A 1 165 GLY 165 165 165 GLY GLY A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 LYS 171 171 171 LYS LYS A . n A 1 172 ASP 172 172 172 ASP ASP A . n A 1 173 THR 173 173 173 THR THR A . n A 1 174 CYS 174 174 174 CYS CYS A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 CYS 184 184 184 CYS CYS A . n A 1 185 ASN 185 185 185 ASN ASN A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 GLN 187 187 187 GLN GLN A . n A 1 188 PHE 188 188 188 PHE PHE A . n A 1 189 GLN 189 189 189 GLN GLN A . n A 1 190 GLY 190 190 190 GLY GLY A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 VAL 192 192 192 VAL VAL A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 TYR 194 194 194 TYR TYR A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 CYS 199 199 199 CYS CYS A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 GLN 201 201 201 GLN GLN A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 PRO 203 203 203 PRO PRO A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 TYR 208 208 208 TYR TYR A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 ASN 210 210 210 ASN ASN A . n A 1 211 VAL 211 211 211 VAL VAL A . n A 1 212 PHE 212 212 212 PHE PHE A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 TRP 217 217 217 TRP TRP A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 ASN 221 221 221 ASN ASN A . n A 1 222 ILE 222 222 222 ILE ILE A . n A 1 223 ALA 223 223 223 ALA ALA A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 THR 226 226 226 THR THR A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 ALA 228 228 228 ALA ALA A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 CYS 230 230 230 CYS CYS A . n A 1 231 PRO 231 231 231 PRO PRO A . n A 1 232 PRO 232 232 232 PRO PRO A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-12 2 'Structure model' 1 1 2013-01-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOLREP phasing . ? 1 REFMAC refinement 5.5.0110 ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 61 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 98 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A GLY 202 ? ? N A PRO 203 ? ? CA A PRO 203 ? ? 128.83 119.30 9.53 1.50 Y 2 1 C A GLY 202 ? ? N A PRO 203 ? ? CD A PRO 203 ? ? 115.47 128.40 -12.93 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 13 ? ? -55.56 -7.91 2 1 SER A 20 ? ? -154.34 -61.35 3 1 THR A 37 ? ? -171.89 -172.13 4 1 GLU A 60 ? ? -48.63 -16.24 5 1 ASP A 61 ? ? -140.43 58.04 6 1 VAL A 113 ? ? -35.87 143.90 7 1 ASP A 145 ? ? -43.60 151.29 8 1 ASN A 154 ? ? -55.62 -8.47 9 1 THR A 160 ? ? -98.75 44.32 10 1 LEU A 167 ? ? -25.91 -71.85 11 1 GLU A 168 ? ? -67.29 2.99 12 1 VAL A 175 ? ? -35.48 102.99 13 1 ASN A 185 ? ? 44.57 70.80 14 1 SER A 193 ? ? -141.19 -47.17 15 1 PRO A 203 ? ? 13.45 36.94 16 1 ASN A 210 ? ? -65.66 88.77 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.504 2 1 1 ? '-H, K, -L' 0.496 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 1 HOH HOH A . B 2 HOH 2 302 2 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 4 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 6 HOH HOH A . B 2 HOH 7 307 7 HOH HOH A . #