HEADER TRANSFERASE 20-JUL-93 4GST TITLE REACTION COORDINATE MOTION IN AN SNAR REACTION CATALYZED BY TITLE 2 GLUTATHIONE TRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.5.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS RATTUS; SOURCE 3 ORGANISM_COMMON: BLACK RAT; SOURCE 4 ORGANISM_TAXID: 10117 KEYWDS GLUTATHIONE TRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.JI,R.N.ARMSTRONG,G.L.GILLILAND REVDAT 4 30-AUG-23 4GST 1 AUTHOR JRNL REMARK REVDAT 3 29-NOV-17 4GST 1 HELIX REVDAT 2 24-FEB-09 4GST 1 VERSN REVDAT 1 31-OCT-93 4GST 0 JRNL AUTH X.JI,R.N.ARMSTRONG,G.L.GILLILAND JRNL TITL SNAPSHOTS ALONG THE REACTION COORDINATE OF AN SNAR REACTION JRNL TITL 2 CATALYZED BY GLUTATHIONE TRANSFERASE. JRNL REF BIOCHEMISTRY V. 32 12949 1993 JRNL REFN ISSN 0006-2960 JRNL PMID 8241147 JRNL DOI 10.1021/BI00211A001 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH W.W.JOHNSON,S.LIU,X.JI,G.L.GILLILAND,R.N.ARMSTRONG REMARK 1 TITL TYROSINE 115 PARTICIPATES BOTH IN CHEMICAL AND PHYSICAL REMARK 1 TITL 2 STEPS OF THE CATALYTIC MECHANISM OF A GLUTATHIONE REMARK 1 TITL 3 S-TRANSFERASE REMARK 1 REF J.BIOL.CHEM. V. 268 11508 1993 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH S.LIU,P.ZHANG,X.JI,W.W.JOHNSON,G.L.GILLILAND,R.N.ARMSTRONG REMARK 1 TITL CONTRIBUTION OF TYROSINE 6 TO THE CATALYTIC MECHANISM OF REMARK 1 TITL 2 ISOENZYME 3-3 OF GLUTATHIONE S-TRANSFERASE REMARK 1 REF J.BIOL.CHEM. V. 267 4296 1992 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 3 REMARK 1 AUTH X.JI,P.ZHANG,R.N.ARMSTRONG,G.L.GILLILAND REMARK 1 TITL THE THREE-DIMENSIONAL STRUCTURE OF A GLUTATHIONE REMARK 1 TITL 2 S-TRANSFERASE FROM THE MU GENE CLASS. STRUCTURAL ANALYSIS OF REMARK 1 TITL 3 THE BINARY COMPLEX OF ISOENZYME 3-3 AND GLUTATHIONE AT 2.2 REMARK 1 TITL 4 ANGSTROMS RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 31 10169 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : GPRLSA REMARK 3 AUTHORS : FUREY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3636 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.017 ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GST COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000179336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 44.12000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 44.12000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 34.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL REMARK 300 YIELD APPROXIMATE COORDINATES FOR CHAIN *B* WHEN APPLIED TO REMARK 300 CHAIN *A*, WHICH CORRESPONDS TO A ROTATION OF 179.749 REMARK 300 DEGREES AROUND THE DIRECTION 0.9536 -0.0553 0.2959. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 426 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 370 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 191 C PRO B 117 3455 1.87 REMARK 500 OE2 GLU A 88 NZ LYS B 217 3455 2.11 REMARK 500 NZ LYS A 191 N ASP B 118 3455 2.14 REMARK 500 NZ LYS A 191 O PRO B 117 3455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 17 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 GLU A 29 CG - CD - OE2 ANGL. DEV. = -14.8 DEGREES REMARK 500 ARG A 31 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 67 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 THR A 70 N - CA - CB ANGL. DEV. = 13.6 DEGREES REMARK 500 ARG A 81 CD - NE - CZ ANGL. DEV. = 9.8 DEGREES REMARK 500 ARG A 95 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 95 O - C - N ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG A 107 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ASP A 118 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 161 OD1 - CG - OD2 ANGL. DEV. = -12.6 DEGREES REMARK 500 ASP A 161 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 161 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 CYS A 173 CB - CA - C ANGL. DEV. = 10.0 DEGREES REMARK 500 ASP A 175 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 186 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 SER A 194 N - CA - CB ANGL. DEV. = 12.2 DEGREES REMARK 500 ARG A 201 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 TYR A 202 CB - CG - CD2 ANGL. DEV. = -4.9 DEGREES REMARK 500 TYR A 202 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 TYR B 6 CB - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG B 10 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG B 17 NE - CZ - NH1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ARG B 31 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 42 CG - CD - NE ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG B 42 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 LEU B 46 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 ASP B 64 CB - CG - OD1 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG B 67 CD - NE - CZ ANGL. DEV. = 14.7 DEGREES REMARK 500 ARG B 67 NE - CZ - NH1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG B 67 NE - CZ - NH2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ARG B 77 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 77 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG B 81 NH1 - CZ - NH2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG B 81 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 GLU B 92 CG - CD - OE1 ANGL. DEV. = 13.5 DEGREES REMARK 500 ARG B 93 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 93 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ARG B 95 CD - NE - CZ ANGL. DEV. = 8.9 DEGREES REMARK 500 ASP B 97 CB - CG - OD1 ANGL. DEV. = 7.5 DEGREES REMARK 500 GLU B 100 CB - CA - C ANGL. DEV. = 12.1 DEGREES REMARK 500 ARG B 107 CG - CD - NE ANGL. DEV. = 18.4 DEGREES REMARK 500 PHE B 157 CB - CG - CD2 ANGL. DEV. = -5.0 DEGREES REMARK 500 PHE B 157 CB - CG - CD1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ASP B 175 CB - CG - OD1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG B 186 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 186 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 SER B 200 O - C - N ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG B 201 CD - NE - CZ ANGL. DEV. = 10.5 DEGREES REMARK 500 ARG B 201 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 71 111.22 78.70 REMARK 500 TYR B 40 71.61 61.07 REMARK 500 GLN B 71 105.75 78.27 REMARK 500 ASP B 118 48.67 -91.22 REMARK 500 PRO B 124 -77.94 -42.89 REMARK 500 LYS B 210 -16.93 -37.26 REMARK 500 ALA B 212 -175.99 -59.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 93 0.08 SIDE CHAIN REMARK 500 ARG A 144 0.09 SIDE CHAIN REMARK 500 ARG A 186 0.09 SIDE CHAIN REMARK 500 ARG B 186 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTD A 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GTD B 220 DBREF 4GST A 1 217 UNP P04905 GSTM1_RAT 1 217 DBREF 4GST B 1 217 UNP P04905 GSTM1_RAT 1 217 SEQRES 1 A 217 PRO MET ILE LEU GLY TYR TRP ASN VAL ARG GLY LEU THR SEQRES 2 A 217 HIS PRO ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 A 217 TYR GLU GLU LYS ARG TYR ALA MET GLY ASP ALA PRO ASP SEQRES 4 A 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 A 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 A 217 SER ARG LYS ILE THR GLN SER ASN ALA ILE MET ARG TYR SEQRES 7 A 217 LEU ALA ARG LYS HIS HIS LEU CYS GLY GLU THR GLU GLU SEQRES 8 A 217 GLU ARG ILE ARG ALA ASP ILE VAL GLU ASN GLN VAL MET SEQRES 9 A 217 ASP ASN ARG MET GLN LEU ILE MET LEU CYS TYR ASN PRO SEQRES 10 A 217 ASP PHE GLU LYS GLN LYS PRO GLU PHE LEU LYS THR ILE SEQRES 11 A 217 PRO GLU LYS MET LYS LEU TYR SER GLU PHE LEU GLY LYS SEQRES 12 A 217 ARG PRO TRP PHE ALA GLY ASP LYS VAL THR TYR VAL ASP SEQRES 13 A 217 PHE LEU ALA TYR ASP ILE LEU ASP GLN TYR HIS ILE PHE SEQRES 14 A 217 GLU PRO LYS CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 A 217 PHE LEU ALA ARG PHE GLU GLY LEU LYS LYS ILE SER ALA SEQRES 16 A 217 TYR MET LYS SER SER ARG TYR LEU SER THR PRO ILE PHE SEQRES 17 A 217 SER LYS LEU ALA GLN TRP SER ASN LYS SEQRES 1 B 217 PRO MET ILE LEU GLY TYR TRP ASN VAL ARG GLY LEU THR SEQRES 2 B 217 HIS PRO ILE ARG LEU LEU LEU GLU TYR THR ASP SER SER SEQRES 3 B 217 TYR GLU GLU LYS ARG TYR ALA MET GLY ASP ALA PRO ASP SEQRES 4 B 217 TYR ASP ARG SER GLN TRP LEU ASN GLU LYS PHE LYS LEU SEQRES 5 B 217 GLY LEU ASP PHE PRO ASN LEU PRO TYR LEU ILE ASP GLY SEQRES 6 B 217 SER ARG LYS ILE THR GLN SER ASN ALA ILE MET ARG TYR SEQRES 7 B 217 LEU ALA ARG LYS HIS HIS LEU CYS GLY GLU THR GLU GLU SEQRES 8 B 217 GLU ARG ILE ARG ALA ASP ILE VAL GLU ASN GLN VAL MET SEQRES 9 B 217 ASP ASN ARG MET GLN LEU ILE MET LEU CYS TYR ASN PRO SEQRES 10 B 217 ASP PHE GLU LYS GLN LYS PRO GLU PHE LEU LYS THR ILE SEQRES 11 B 217 PRO GLU LYS MET LYS LEU TYR SER GLU PHE LEU GLY LYS SEQRES 12 B 217 ARG PRO TRP PHE ALA GLY ASP LYS VAL THR TYR VAL ASP SEQRES 13 B 217 PHE LEU ALA TYR ASP ILE LEU ASP GLN TYR HIS ILE PHE SEQRES 14 B 217 GLU PRO LYS CYS LEU ASP ALA PHE PRO ASN LEU LYS ASP SEQRES 15 B 217 PHE LEU ALA ARG PHE GLU GLY LEU LYS LYS ILE SER ALA SEQRES 16 B 217 TYR MET LYS SER SER ARG TYR LEU SER THR PRO ILE PHE SEQRES 17 B 217 SER LYS LEU ALA GLN TRP SER ASN LYS HET SO4 A 218 5 HET SO4 A 219 5 HET SO4 A 220 5 HET SO4 A 221 5 HET GTD A 222 35 HET SO4 B 218 5 HET SO4 B 219 5 HET GTD B 220 35 HETNAM SO4 SULFATE ION HETNAM GTD 1-(S-GLUTATHIONYL)-2,4,6-TRINITROCYCLOHEXA-2,5-DIENE HETSYN GTD (S)-2-AMINO-5-((R)-1-(CARBOXYMETHYLAMINO)-1-OXO-3-(2,4, HETSYN 2 GTD 6-TRINITROCYCLOHEXA-2,5-DIENYLTHIO)PROPAN-2-YLAMINO)- HETSYN 3 GTD 5-OXOPENTANOIC ACID FORMUL 3 SO4 6(O4 S 2-) FORMUL 7 GTD 2(C16 H20 N6 O12 S) FORMUL 11 HOH *360(H2 O) HELIX 1 H1 HIS A 14 TYR A 22 1 9 HELIX 2 H2 SER A 43 LEU A 46 1 4 HELIX 3 H3 SER A 72 LYS A 82 1 11 HELIX 4 H4 GLU A 90 CYS A 114 1 25 HELIX 5 H5 PHE A 119 LEU A 141 1 23 HELIX 6 H6 TYR A 154 PHE A 169 1 16 HELIX 7 H7 PRO A 178 GLU A 188 1 11 HELIX 8 H8 LYS A 191 LYS A 198 1 8 HELIX 9 H9 HIS B 14 TYR B 22 1 9 HELIX 10 H10 SER B 43 LYS B 49 1 7 HELIX 11 H11 SER B 72 LYS B 82 1 11 HELIX 12 H12 GLU B 90 CYS B 114 1 25 HELIX 13 H13 PHE B 119 LEU B 141 1 23 HELIX 14 H14 TYR B 154 PHE B 169 1 16 HELIX 15 H15 PRO B 178 GLU B 188 1 11 HELIX 16 H16 LYS B 191 MET B 197 1 7 SHEET 1 S1 4 TYR A 27 TYR A 32 0 SHEET 2 S1 4 MET A 2 TRP A 7 1 O MET A 2 N GLU A 28 SHEET 3 S1 4 TYR A 61 ASP A 64 -1 O ILE A 63 N ILE A 3 SHEET 4 S1 4 ARG A 67 THR A 70 -1 O ARG A 67 N ASP A 64 SHEET 1 S2 4 TYR B 27 TYR B 32 0 SHEET 2 S2 4 MET B 2 TRP B 7 1 O MET B 2 N GLU B 28 SHEET 3 S2 4 TYR B 61 ASP B 64 -1 O ILE B 63 N ILE B 3 SHEET 4 S2 4 ARG B 67 THR B 70 -1 O ARG B 67 N ASP B 64 CISPEP 1 ALA A 37 PRO A 38 0 4.16 CISPEP 2 LEU A 59 PRO A 60 0 -0.67 CISPEP 3 THR A 205 PRO A 206 0 -1.85 CISPEP 4 ALA B 37 PRO B 38 0 2.28 CISPEP 5 LEU B 59 PRO B 60 0 -2.66 CISPEP 6 THR B 205 PRO B 206 0 -2.99 SITE 1 AC1 9 ARG A 81 CYS A 86 HOH A 249 HOH A 292 SITE 2 AC1 9 HOH A 376 HOH A 384 HOH A 393 HOH A 418 SITE 3 AC1 9 ARG B 93 SITE 1 AC2 1 ARG A 67 SITE 1 AC3 3 LYS A 49 PHE A 50 HOH A 416 SITE 1 AC4 3 SER A 199 ARG A 201 HOH A 398 SITE 1 AC5 5 SER B 199 ARG B 201 HOH B 244 HOH B 260 SITE 2 AC5 5 HOH B 347 SITE 1 AC6 4 LYS A 121 HOH A 321 ARG B 186 HOH B 279 SITE 1 AC7 25 TYR A 6 TRP A 7 GLY A 11 LEU A 12 SITE 2 AC7 25 ARG A 42 TRP A 45 LYS A 49 ASN A 58 SITE 3 AC7 25 LEU A 59 PRO A 60 GLN A 71 SER A 72 SITE 4 AC7 25 ARG A 107 ILE A 111 TYR A 115 PHE A 208 SITE 5 AC7 25 SER A 209 HOH A 224 HOH A 226 HOH A 243 SITE 6 AC7 25 HOH A 273 HOH A 314 HOH A 375 HOH A 378 SITE 7 AC7 25 ASP B 105 SITE 1 AC8 22 ASP A 105 HOH A 232 TYR B 6 TRP B 7 SITE 2 AC8 22 GLY B 11 TRP B 45 LYS B 49 ASN B 58 SITE 3 AC8 22 LEU B 59 PRO B 60 GLN B 71 SER B 72 SITE 4 AC8 22 ARG B 107 ILE B 111 TYR B 115 PHE B 208 SITE 5 AC8 22 HOH B 221 HOH B 225 HOH B 263 HOH B 280 SITE 6 AC8 22 HOH B 330 HOH B 348 CRYST1 88.240 69.440 81.280 90.00 106.01 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011333 0.000000 0.003252 0.00000 SCALE2 0.000000 0.014401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012800 0.00000 MTRIX1 1 0.825800 -0.068300 0.559900 -6.89290 1 MTRIX2 1 -0.067700 -0.997500 -0.021800 31.15310 1 MTRIX3 1 0.559900 -0.019900 -0.828300 26.56300 1