HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 28-AUG-12 4GT6 TITLE CRYSTAL STRUCTURE OF A LEUCINE RICH CELL SURFACE PROTEIN TITLE 2 (FAEPRAA2165_01021) FROM FAECALIBACTERIUM PRAUSNITZII A2-165 AT 1.80 TITLE 3 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL SURFACE PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 28-420; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FAECALIBACTERIUM PRAUSNITZII A2-165; SOURCE 3 ORGANISM_TAXID: 411483; SOURCE 4 GENE: FAEPRAA2165_01021; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS LEUCINE RICH REPEATS, PUTATIVE PROTEIN BINDING, EXTRACELLULAR KEYWDS 2 PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 3 01-FEB-23 4GT6 1 REMARK SEQADV LINK REVDAT 2 15-NOV-17 4GT6 1 REMARK REVDAT 1 26-SEP-12 4GT6 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A LEUCINE RICH CELL SURFACE PROTEIN JRNL TITL 2 (FAEPRAA2165_01021) FROM FAECALIBACTERIUM PRAUSNITZII A2-165 JRNL TITL 3 AT 1.80 A RESOLUTION (CASP TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.93 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 58367 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2954 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.85 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 4279 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1990 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4063 REMARK 3 BIN R VALUE (WORKING SET) : 0.1979 REMARK 3 BIN FREE R VALUE : 0.2204 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.05 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 216 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2886 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 529 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.84860 REMARK 3 B22 (A**2) : 0.84860 REMARK 3 B33 (A**2) : -1.69730 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.168 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3214 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4394 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1513 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 81 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 493 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3214 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 468 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 3 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4477 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.25 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.51 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: A 28 A 274 REMARK 3 ORIGIN FOR THE GROUP (A): 67.7416 51.0156 72.2041 REMARK 3 T TENSOR REMARK 3 T11: -0.0528 T22: -0.0371 REMARK 3 T33: -0.0419 T12: 0.0024 REMARK 3 T13: -0.0101 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.7175 L22: 0.5302 REMARK 3 L33: 0.4690 L12: 0.1308 REMARK 3 L13: -0.1094 L23: -0.3085 REMARK 3 S TENSOR REMARK 3 S11: 0.0471 S12: -0.0402 S13: -0.0121 REMARK 3 S21: 0.0680 S22: -0.0036 S23: 0.0062 REMARK 3 S31: -0.0623 S32: 0.0289 S33: -0.0435 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: A 275 A 383 REMARK 3 ORIGIN FOR THE GROUP (A): 80.6609 66.7932 43.1306 REMARK 3 T TENSOR REMARK 3 T11: -0.0519 T22: 0.0185 REMARK 3 T33: 0.0015 T12: 0.0113 REMARK 3 T13: -0.0039 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 0.9492 L22: 1.2460 REMARK 3 L33: 2.0237 L12: 0.1372 REMARK 3 L13: -0.0389 L23: 0.5663 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: 0.1840 S13: 0.0490 REMARK 3 S21: -0.1528 S22: -0.0765 S23: 0.1135 REMARK 3 S31: -0.2114 S32: -0.1931 S33: 0.0141 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: A 384 A 406 REMARK 3 ORIGIN FOR THE GROUP (A): 78.4897 64.5058 26.6218 REMARK 3 T TENSOR REMARK 3 T11: 0.0403 T22: 0.0222 REMARK 3 T33: -0.1253 T12: 0.0434 REMARK 3 T13: -0.0538 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.9306 L22: 6.2738 REMARK 3 L33: 5.4137 L12: -0.6565 REMARK 3 L13: 1.2938 L23: 3.3886 REMARK 3 S TENSOR REMARK 3 S11: -0.0883 S12: 0.3822 S13: -0.0599 REMARK 3 S21: -0.3086 S22: 0.1771 S23: 0.1581 REMARK 3 S31: -0.1953 S32: -0.5260 S33: -0.0889 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GT6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074601. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RHODIUM-COATED VERTICAL AND REMARK 200 HORIZONTAL FOCUSING MIRRORS; REMARK 200 LIQUID-NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58422 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 26.927 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.11800 REMARK 200 FOR THE DATA SET : 11.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.73200 REMARK 200 R SYM FOR SHELL (I) : 0.73200 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30.00% POLYETHYLENE GLYCOL 6000, 0.1M REMARK 280 BICINE PH 9.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.71200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.85600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 38.78400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 12.92800 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.64000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 407 REMARK 465 ASN A 408 REMARK 465 LEU A 409 REMARK 465 PRO A 410 REMARK 465 VAL A 411 REMARK 465 ALA A 412 REMARK 465 PRO A 413 REMARK 465 GLY A 414 REMARK 465 SER A 415 REMARK 465 ILE A 416 REMARK 465 ASP A 417 REMARK 465 VAL A 418 REMARK 465 THR A 419 REMARK 465 VAL A 420 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 373 CE NZ REMARK 470 ASP A 403 CB CG OD1 OD2 REMARK 470 SER A 404 OG REMARK 470 LEU A 406 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 58 29.47 -145.24 REMARK 500 ARG A 203 18.83 58.01 REMARK 500 ASP A 354 19.21 57.95 REMARK 500 CYS A 382 68.62 -113.59 REMARK 500 SER A 404 126.60 -175.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 916 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 323 O REMARK 620 2 GLU A 346 O 175.9 REMARK 620 3 HOH A1019 O 84.4 98.6 REMARK 620 4 HOH A1097 O 84.3 98.7 84.2 REMARK 620 5 HOH A1142 O 90.1 87.1 90.0 172.4 REMARK 620 6 HOH A1258 O 99.0 78.0 176.5 96.7 89.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 906 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 907 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 908 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 909 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 910 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 912 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 914 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 915 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 916 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-423549 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 28-420 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4GT6 A 28 420 UNP C7H408 C7H408_9FIRM 28 420 SEQADV 4GT6 GLY A 0 UNP C7H408 EXPRESSION TAG SEQRES 1 A 394 GLY ALA SER ASP SER PRO MSE ALA TYR THR ASP GLY SER SEQRES 2 A 394 TYR GLN PHE ILE LEU ASN ALA ASP ASN THR ALA THR ILE SEQRES 3 A 394 THR LYS TYR THR GLY ASN GLU HIS ARG ILE THR ILE PRO SEQRES 4 A 394 ALA GLN VAL THR HIS GLY ALA TYR ILE TYR PRO VAL SER SEQRES 5 A 394 LYS ILE GLY ASP ARG VAL PHE CYS ASN TYR LYS TYR VAL SEQRES 6 A 394 LEU THR SER VAL GLN ILE PRO ASP THR VAL THR GLU ILE SEQRES 7 A 394 GLY SER ASN ALA PHE TYR ASN CYS THR SER LEU LYS ARG SEQRES 8 A 394 VAL THR ILE GLN ASP ASN LYS PRO SER CYS VAL LYS LYS SEQRES 9 A 394 ILE GLY ARG GLN ALA PHE MSE PHE CYS SER GLU LEU THR SEQRES 10 A 394 ASP ILE PRO ILE LEU ASP SER VAL THR GLU ILE ASP SER SEQRES 11 A 394 GLU ALA PHE HIS HIS CYS GLU GLU LEU ASP THR VAL THR SEQRES 12 A 394 ILE PRO GLU GLY VAL THR SER VAL ALA ASP GLY MSE PHE SEQRES 13 A 394 SER TYR CYS TYR SER LEU HIS THR VAL THR LEU PRO ASP SEQRES 14 A 394 SER VAL THR ALA ILE GLU GLU ARG ALA PHE THR GLY THR SEQRES 15 A 394 ALA LEU THR GLN ILE HIS ILE PRO ALA LYS VAL THR ARG SEQRES 16 A 394 ILE GLY THR ASN ALA PHE SER GLU CYS PHE ALA LEU SER SEQRES 17 A 394 THR ILE THR SER ASP SER GLU SER TYR PRO ALA ILE ASP SEQRES 18 A 394 ASN VAL LEU TYR GLU LYS SER ALA ASN GLY ASP TYR ALA SEQRES 19 A 394 LEU ILE ARG TYR PRO SER GLN ARG GLU ASP PRO ALA PHE SEQRES 20 A 394 LYS ILE PRO ASN GLY VAL ALA ARG ILE GLU THR HIS ALA SEQRES 21 A 394 PHE ASP SER CYS ALA TYR LEU ALA SER VAL LYS MSE PRO SEQRES 22 A 394 ASP SER VAL VAL SER ILE GLY THR GLY ALA PHE MSE ASN SEQRES 23 A 394 CYS PRO ALA LEU GLN ASP ILE GLU PHE SER SER ARG ILE SEQRES 24 A 394 THR GLU LEU PRO GLU SER VAL PHE ALA GLY CYS ILE SER SEQRES 25 A 394 LEU LYS SER ILE ASP ILE PRO GLU GLY ILE THR GLN ILE SEQRES 26 A 394 LEU ASP ASP ALA PHE ALA GLY CYS GLU GLN LEU GLU ARG SEQRES 27 A 394 ILE ALA ILE PRO SER SER VAL THR LYS ILE PRO GLU SER SEQRES 28 A 394 ALA PHE SER ASN CYS THR ALA LEU ASN ASN ILE GLU TYR SEQRES 29 A 394 SER GLY SER ARG SER GLN TRP ASN ALA ILE SER THR ASP SEQRES 30 A 394 SER GLY LEU GLN ASN LEU PRO VAL ALA PRO GLY SER ILE SEQRES 31 A 394 ASP VAL THR VAL MODRES 4GT6 MSE A 33 MET SELENOMETHIONINE MODRES 4GT6 MSE A 137 MET SELENOMETHIONINE MODRES 4GT6 MSE A 181 MET SELENOMETHIONINE MODRES 4GT6 MSE A 298 MET SELENOMETHIONINE MODRES 4GT6 MSE A 311 MET SELENOMETHIONINE HET MSE A 33 16 HET MSE A 137 8 HET MSE A 181 13 HET MSE A 298 8 HET MSE A 311 8 HET EDO A 900 4 HET EDO A 901 4 HET EDO A 902 4 HET EDO A 903 4 HET EDO A 904 4 HET EDO A 905 4 HET EDO A 906 4 HET EDO A 907 4 HET EDO A 908 4 HET EDO A 909 4 HET EDO A 910 4 HET EDO A 911 4 HET EDO A 912 4 HET EDO A 913 4 HET EDO A 914 4 HET EDO A 915 4 HET NA A 916 1 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 EDO 16(C2 H6 O2) FORMUL 18 NA NA 1+ FORMUL 19 HOH *529(H2 O) HELIX 1 1 ASP A 122 LYS A 124 5 3 HELIX 2 2 ILE A 145 ASP A 149 5 5 HELIX 3 3 PRO A 375 SER A 380 5 6 HELIX 4 4 SER A 393 ALA A 399 1 7 SHEET 1 A 5 TYR A 35 ASP A 37 0 SHEET 2 A 5 TYR A 40 LEU A 44 -1 O PHE A 42 N TYR A 35 SHEET 3 A 5 ALA A 50 TYR A 55 -1 O THR A 53 N GLN A 41 SHEET 4 A 5 TYR A 73 ILE A 80 1 O PRO A 76 N ALA A 50 SHEET 5 A 5 GLN A 67 HIS A 70 -1 N VAL A 68 O TYR A 75 SHEET 1 B 7 TYR A 35 ASP A 37 0 SHEET 2 B 7 TYR A 40 LEU A 44 -1 O PHE A 42 N TYR A 35 SHEET 3 B 7 ALA A 50 TYR A 55 -1 O THR A 53 N GLN A 41 SHEET 4 B 7 TYR A 73 ILE A 80 1 O PRO A 76 N ALA A 50 SHEET 5 B 7 GLU A 103 ILE A 104 1 O GLU A 103 N ILE A 80 SHEET 6 B 7 LYS A 130 ILE A 131 1 O LYS A 130 N ILE A 104 SHEET 7 B 7 GLU A 153 ILE A 154 1 O GLU A 153 N ILE A 131 SHEET 1 C 3 ARG A 61 THR A 63 0 SHEET 2 C 3 SER A 94 ILE A 97 1 O SER A 94 N ILE A 62 SHEET 3 C 3 ARG A 117 ILE A 120 1 O THR A 119 N ILE A 97 SHEET 1 D 2 THR A 167 THR A 169 0 SHEET 2 D 2 THR A 190 THR A 192 1 O THR A 192 N VAL A 168 SHEET 1 E 3 SER A 176 VAL A 177 0 SHEET 2 E 3 ALA A 199 ILE A 200 1 O ALA A 199 N VAL A 177 SHEET 3 E 3 ARG A 221 ILE A 222 1 O ARG A 221 N ILE A 200 SHEET 1 F 2 GLN A 212 ILE A 215 0 SHEET 2 F 2 THR A 235 SER A 238 1 O THR A 237 N ILE A 213 SHEET 1 G 4 LEU A 250 LYS A 253 0 SHEET 2 G 4 TYR A 259 ARG A 263 -1 O ARG A 263 N LEU A 250 SHEET 3 G 4 VAL A 279 ILE A 282 1 O ALA A 280 N TYR A 259 SHEET 4 G 4 SER A 304 ILE A 305 1 O SER A 304 N ILE A 282 SHEET 1 H 3 ALA A 272 LYS A 274 0 SHEET 2 H 3 SER A 295 LYS A 297 1 O SER A 295 N PHE A 273 SHEET 3 H 3 ASP A 318 GLU A 320 1 O ASP A 318 N VAL A 296 SHEET 1 I 2 GLU A 327 LEU A 328 0 SHEET 2 I 2 GLN A 350 ILE A 351 1 O GLN A 350 N LEU A 328 SHEET 1 J 3 SER A 341 ASP A 343 0 SHEET 2 J 3 ARG A 364 ILE A 367 1 O ALA A 366 N ILE A 342 SHEET 3 J 3 ASN A 387 TYR A 390 1 O GLU A 389 N ILE A 365 LINK C PRO A 32 N AMSE A 33 1555 1555 1.36 LINK C PRO A 32 N BMSE A 33 1555 1555 1.35 LINK C AMSE A 33 N ALA A 34 1555 1555 1.34 LINK C BMSE A 33 N ALA A 34 1555 1555 1.35 LINK C PHE A 136 N MSE A 137 1555 1555 1.34 LINK C MSE A 137 N PHE A 138 1555 1555 1.35 LINK C GLY A 180 N MSE A 181 1555 1555 1.34 LINK C MSE A 181 N PHE A 182 1555 1555 1.34 LINK C LYS A 297 N MSE A 298 1555 1555 1.34 LINK C MSE A 298 N PRO A 299 1555 1555 1.36 LINK C PHE A 310 N MSE A 311 1555 1555 1.32 LINK C MSE A 311 N ASN A 312 1555 1555 1.34 LINK O SER A 323 NA NA A 916 1555 1555 2.38 LINK O GLU A 346 NA NA A 916 1555 1555 2.37 LINK NA NA A 916 O HOH A1019 1555 1555 2.44 LINK NA NA A 916 O HOH A1097 1555 1555 2.47 LINK NA NA A 916 O HOH A1142 1555 1555 2.45 LINK NA NA A 916 O AHOH A1258 1555 1555 2.42 SITE 1 AC1 5 ARG A 281 THR A 284 ILE A 305 GLY A 306 SITE 2 AC1 5 THR A 307 SITE 1 AC2 2 ALA A 34 THR A 36 SITE 1 AC3 4 GLU A 241 SER A 242 LYS A 253 HOH A1236 SITE 1 AC4 2 ARG A 394 TRP A 397 SITE 1 AC5 8 ILE A 222 GLY A 223 THR A 224 ASN A 225 SITE 2 AC5 8 ILE A 262 HOH A1042 HOH A1369 HOH A1370 SITE 1 AC6 5 ARG A 203 THR A 206 SER A 228 GLU A 229 SITE 2 AC6 5 HIS A 285 SITE 1 AC7 4 THR A 208 ALA A 209 GLU A 229 PHE A 231 SITE 1 AC8 7 MSE A 298 ASP A 300 GLU A 320 PHE A 321 SITE 2 AC8 7 SER A 323 HOH A1144 HOH A1215 SITE 1 AC9 6 VAL A 191 LEU A 193 ILE A 213 HIS A 214 SITE 2 AC9 6 HOH A1168 HOH A1517 SITE 1 BC1 3 LEU A 385 ASN A 386 HOH A1467 SITE 1 BC2 5 THR A 224 ASN A 225 THR A 284 HIS A 285 SITE 2 BC2 5 HOH A1274 SITE 1 BC3 7 ILE A 120 ASN A 123 LYS A 124 SER A 126 SITE 2 BC3 7 PRO A 146 ASP A 149 HOH A1223 SITE 1 BC4 6 TYR A 55 ARG A 83 VAL A 84 PHE A 85 SITE 2 BC4 6 CYS A 86 TYR A 88 SITE 1 BC5 3 GLY A 71 ALA A 72 ILE A 74 SITE 1 BC6 5 LYS A 274 LYS A 297 GLU A 320 HOH A1133 SITE 2 BC6 5 HOH A1221 SITE 1 BC7 4 THR A 36 ASP A 37 THR A 69 HOH A1499 SITE 1 BC8 6 SER A 323 GLU A 346 HOH A1019 HOH A1097 SITE 2 BC8 6 HOH A1142 HOH A1258 CRYST1 119.538 119.538 77.568 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008366 0.004830 0.000000 0.00000 SCALE2 0.000000 0.009660 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012892 0.00000