HEADER VIRAL PROTEIN 30-AUG-12 4GVE TITLE TACARIBE NUCLEOPROTEIN STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN RESIDUES 364-570; COMPND 5 SYNONYM: NUCLEOCAPSID PROTEIN, PROTEIN N; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TACARIBE VIRUS; SOURCE 3 ORGANISM_TAXID: 928313; SOURCE 4 STRAIN: ATCC STRAIN 11573, FRANZE-FERNANDEZ; SOURCE 5 GENE: N, NUCLEOPROTEIN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PLOU3 KEYWDS DEDDH FAMILY ENZYME, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR X.JIANG,Q.HUANG,W.WANG,H.DONG,H.LY,Y.LIANG,C.DONG REVDAT 4 13-SEP-23 4GVE 1 REMARK SEQADV LINK REVDAT 3 10-JUL-13 4GVE 1 JRNL REVDAT 2 15-MAY-13 4GVE 1 JRNL REVDAT 1 01-MAY-13 4GVE 0 JRNL AUTH X.JIANG,Q.HUANG,W.WANG,H.DONG,H.LY,Y.LIANG,C.DONG JRNL TITL STRUCTURES OF ARENAVIRAL NUCLEOPROTEINS WITH TRIPHOSPHATE JRNL TITL 2 DSRNA REVEAL A UNIQUE MECHANISM OF IMMUNE SUPPRESSION. JRNL REF J.BIOL.CHEM. V. 288 16949 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23615902 JRNL DOI 10.1074/JBC.M112.420521 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 37294 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1896 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2662 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 147 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1565 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -10.16000 REMARK 3 B22 (A**2) : -10.16000 REMARK 3 B33 (A**2) : 20.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.014 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.013 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.231 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1607 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2175 ; 1.252 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 195 ; 5.553 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 73 ;32.189 ;24.932 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 282 ;14.344 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;12.803 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 235 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1216 ; 0.006 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.650 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.350 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 358 A 564 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5833 15.9252 2.6379 REMARK 3 T TENSOR REMARK 3 T11: 0.1757 T22: 0.1918 REMARK 3 T33: 0.0789 T12: -0.0313 REMARK 3 T13: 0.0176 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 1.5365 L22: 1.8258 REMARK 3 L33: 0.9979 L12: 0.9513 REMARK 3 L13: 0.7314 L23: 0.6010 REMARK 3 S TENSOR REMARK 3 S11: -0.0147 S12: 0.0780 S13: -0.0842 REMARK 3 S21: -0.0021 S22: 0.1203 S23: -0.1148 REMARK 3 S31: -0.0745 S32: 0.1344 S33: -0.1056 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 701 A 771 REMARK 3 ORIGIN FOR THE GROUP (A): 19.7982 18.2261 3.3792 REMARK 3 T TENSOR REMARK 3 T11: 0.1988 T22: 0.1887 REMARK 3 T33: 0.0658 T12: -0.0379 REMARK 3 T13: 0.0282 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.3265 L22: 1.5259 REMARK 3 L33: 0.7649 L12: 0.6516 REMARK 3 L13: 0.5436 L23: 0.6538 REMARK 3 S TENSOR REMARK 3 S11: -0.0645 S12: 0.0228 S13: 0.0365 REMARK 3 S21: 0.0096 S22: 0.0779 S23: 0.0017 REMARK 3 S31: -0.1187 S32: 0.1050 S33: -0.0134 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 772 A 805 REMARK 3 ORIGIN FOR THE GROUP (A): 20.6739 20.9338 -3.7385 REMARK 3 T TENSOR REMARK 3 T11: 0.2138 T22: 0.2133 REMARK 3 T33: 0.1156 T12: -0.0915 REMARK 3 T13: 0.0865 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 1.9360 L22: 1.8687 REMARK 3 L33: 1.3166 L12: 0.3359 REMARK 3 L13: 1.1449 L23: -0.2510 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: 0.1911 S13: -0.0231 REMARK 3 S21: -0.1657 S22: 0.0921 S23: -0.1024 REMARK 3 S31: -0.1142 S32: 0.3333 S33: -0.1060 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 806 A 815 REMARK 3 ORIGIN FOR THE GROUP (A): 18.9509 22.0759 -4.2843 REMARK 3 T TENSOR REMARK 3 T11: 0.1590 T22: 0.1999 REMARK 3 T33: 0.2202 T12: -0.0333 REMARK 3 T13: 0.0109 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.9632 L22: 2.3735 REMARK 3 L33: 3.9041 L12: 0.9431 REMARK 3 L13: -0.0535 L23: -0.8057 REMARK 3 S TENSOR REMARK 3 S11: -0.0565 S12: 0.3309 S13: 0.0242 REMARK 3 S21: -0.0124 S22: 0.2272 S23: 0.1476 REMARK 3 S31: -0.1333 S32: 0.1302 S33: -0.1707 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 816 A 823 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2554 22.4875 -0.1397 REMARK 3 T TENSOR REMARK 3 T11: 0.2612 T22: 0.2381 REMARK 3 T33: 0.1821 T12: -0.0243 REMARK 3 T13: 0.1480 T23: -0.0638 REMARK 3 L TENSOR REMARK 3 L11: 3.9840 L22: 0.4244 REMARK 3 L33: 0.6353 L12: 0.5819 REMARK 3 L13: 0.1135 L23: -0.0273 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 0.5544 S13: -0.1447 REMARK 3 S21: 0.0757 S22: -0.1233 S23: 0.1244 REMARK 3 S31: 0.1497 S32: 0.0581 S33: 0.1910 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 824 A 829 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9287 8.1485 0.8526 REMARK 3 T TENSOR REMARK 3 T11: 0.3528 T22: 1.0776 REMARK 3 T33: 0.1681 T12: -0.1544 REMARK 3 T13: -0.0183 T23: 0.2021 REMARK 3 L TENSOR REMARK 3 L11: 3.0091 L22: 8.6255 REMARK 3 L33: 0.8681 L12: 3.8130 REMARK 3 L13: -0.6763 L23: 0.7709 REMARK 3 S TENSOR REMARK 3 S11: -0.0751 S12: -0.5836 S13: -0.4976 REMARK 3 S21: -0.2371 S22: -0.0550 S23: -0.4830 REMARK 3 S31: -0.0337 S32: 0.3214 S33: 0.1300 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4GVE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074680. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39191 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 57.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.900 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 1.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.78000 REMARK 200 R SYM FOR SHELL (I) : 0.76000 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 4GV3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG3350, 0.1 M MOPS (PH7.0), AND REMARK 280 0.11 M AMMONIUM CITRATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 57.58500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.58500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 28.46000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 57.58500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.58500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.46000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 57.58500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 57.58500 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 28.46000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 57.58500 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 57.58500 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 28.46000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 514 REMARK 465 ASN A 515 REMARK 465 LYS A 516 REMARK 465 SER A 517 REMARK 465 LYS A 518 REMARK 465 ASP A 519 REMARK 465 SER A 520 REMARK 465 PRO A 521 REMARK 465 PRO A 522 REMARK 465 SER A 523 REMARK 465 LYS A 565 REMARK 465 THR A 566 REMARK 465 ALA A 567 REMARK 465 PHE A 568 REMARK 465 ALA A 569 REMARK 465 LEU A 570 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 393 62.23 -153.53 REMARK 500 SER A 427 -68.01 -135.08 REMARK 500 ARG A 473 52.42 -111.40 REMARK 500 HIS A 506 79.27 -113.87 REMARK 500 GLU A 550 124.36 -171.45 REMARK 500 GLU A 551 100.79 47.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 386 OD2 REMARK 620 2 GLU A 388 OE2 91.7 REMARK 620 3 ASP A 535 OD2 93.7 98.6 REMARK 620 4 HOH A 830 O 173.2 89.1 92.9 REMARK 620 5 HOH A 831 O 88.1 101.1 160.2 85.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 396 OE2 REMARK 620 2 CYS A 503 SG 105.8 REMARK 620 3 HIS A 506 NE2 108.0 104.4 REMARK 620 4 CYS A 531 SG 115.0 116.3 106.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3MWP RELATED DB: PDB REMARK 900 ARENAVIRUS NUCLEOPROTEIN REMARK 900 RELATED ID: 4G9Z RELATED DB: PDB REMARK 900 LASSA VIRUS NUCLEOPROTEIN IN COMPLEX WITH TRIPHOSPHATED DSRNA REMARK 900 RELATED ID: 4GV3 RELATED DB: PDB REMARK 900 LASSA VIRUS NUCLEOPROTEIN IN COMPLEX WITH TRIPHOSPHATED DSRNA REMARK 900 RELATED ID: 4GV6 RELATED DB: PDB REMARK 900 SOAKING WITH MN2+ FOR 1 MIN REMARK 900 RELATED ID: 4GV9 RELATED DB: PDB DBREF 4GVE A 364 570 UNP P18140 NCAP_TACVF 364 570 SEQADV 4GVE ASP A 358 UNP P18140 EXPRESSION TAG SEQADV 4GVE ILE A 359 UNP P18140 EXPRESSION TAG SEQADV 4GVE GLY A 360 UNP P18140 EXPRESSION TAG SEQADV 4GVE SER A 361 UNP P18140 EXPRESSION TAG SEQADV 4GVE GLU A 362 UNP P18140 EXPRESSION TAG SEQADV 4GVE PHE A 363 UNP P18140 EXPRESSION TAG SEQADV 4GVE VAL A 374 UNP P18140 ILE 374 CONFLICT SEQADV 4GVE GLY A 389 UNP P18140 ASP 389 CONFLICT SEQADV 4GVE PRO A 390 UNP P18140 LEU 390 CONFLICT SEQADV 4GVE PRO A 391 UNP P18140 GLN 391 CONFLICT SEQADV 4GVE THR A 392 UNP P18140 LEU 392 CONFLICT SEQADV 4GVE GLN A 490 UNP P18140 LEU 490 CONFLICT SEQADV 4GVE MET A 543 UNP P18140 VAL 543 CONFLICT SEQRES 1 A 213 ASP ILE GLY SER GLU PHE GLU GLY GLN GLU LEU ILE VAL SEQRES 2 A 213 ARG ALA ALA VAL SER GLU LEU ASP PRO SER ASN THR ILE SEQRES 3 A 213 TRP LEU ASP ILE GLU GLY PRO PRO THR ASP PRO VAL GLU SEQRES 4 A 213 LEU ALA LEU TYR GLN PRO ALA LYS LYS GLN TYR ILE HIS SEQRES 5 A 213 CYS PHE ARG LYS PRO HIS ASP GLU LYS GLY PHE LYS ASN SEQRES 6 A 213 GLY SER ARG HIS SER HIS GLY ILE LEU MET LYS ASP ILE SEQRES 7 A 213 GLU ASP ALA VAL PRO GLY VAL LEU SER TYR VAL ILE GLY SEQRES 8 A 213 LEU LEU PRO PRO ASN MET VAL ILE THR THR GLN GLY SER SEQRES 9 A 213 ASP ASP ILE ARG LYS LEU LEU ASP ILE HIS GLY ARG LYS SEQRES 10 A 213 ASP LEU LYS LEU ILE ASP VAL LYS PHE THR SER ASP GLN SEQRES 11 A 213 ALA ARG GLN PHE GLU HIS GLN VAL TRP ASP LYS PHE GLY SEQRES 12 A 213 HIS LEU CYS LYS GLN HIS ASN GLY VAL ILE ILE SER LYS SEQRES 13 A 213 LYS ASN LYS SER LYS ASP SER PRO PRO SER PRO SER PRO SEQRES 14 A 213 ASP GLU PRO HIS CYS ALA LEU LEU ASP CYS ILE MET PHE SEQRES 15 A 213 HIS SER ALA MET SER GLY GLU LEU PRO LYS GLU GLU PRO SEQRES 16 A 213 ILE PRO LEU LEU PRO LYS GLU PHE LEU PHE PHE PRO LYS SEQRES 17 A 213 THR ALA PHE ALA LEU HET ZN A 601 1 HET MG A 602 1 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION FORMUL 2 ZN ZN 2+ FORMUL 3 MG MG 2+ FORMUL 4 HOH *131(H2 O) HELIX 1 1 PHE A 363 GLU A 376 1 14 HELIX 2 2 PRO A 402 LYS A 404 5 3 HELIX 3 3 ASP A 416 SER A 427 1 12 HELIX 4 4 LEU A 431 GLU A 436 1 6 HELIX 5 5 GLY A 441 LEU A 450 1 10 HELIX 6 6 GLY A 460 HIS A 471 1 12 HELIX 7 7 THR A 484 ARG A 489 1 6 HELIX 8 8 PHE A 491 GLY A 500 1 10 HELIX 9 9 HIS A 501 CYS A 503 5 3 HELIX 10 10 CYS A 531 GLY A 545 1 15 HELIX 11 11 PRO A 557 LEU A 561 5 5 SHEET 1 A 4 TRP A 384 GLU A 388 0 SHEET 2 A 4 GLU A 396 GLN A 401 -1 O TYR A 400 N TRP A 384 SHEET 3 A 4 GLN A 406 PHE A 411 -1 O GLN A 406 N GLN A 401 SHEET 4 A 4 ILE A 553 PRO A 554 1 O ILE A 553 N TYR A 407 SHEET 1 B 2 VAL A 455 THR A 458 0 SHEET 2 B 2 LYS A 477 ASP A 480 1 O LYS A 477 N ILE A 456 LINK OD2 ASP A 386 MG MG A 602 1555 1555 2.13 LINK OE2 GLU A 388 MG MG A 602 1555 1555 2.02 LINK OE2 GLU A 396 ZN ZN A 601 1555 1555 2.04 LINK SG CYS A 503 ZN ZN A 601 1555 1555 2.34 LINK NE2 HIS A 506 ZN ZN A 601 1555 1555 1.90 LINK SG CYS A 531 ZN ZN A 601 1555 1555 2.28 LINK OD2 ASP A 535 MG MG A 602 1555 1555 2.00 LINK MG MG A 602 O HOH A 830 1555 1555 2.17 LINK MG MG A 602 O HOH A 831 1555 1555 2.08 SITE 1 AC1 4 GLU A 396 CYS A 503 HIS A 506 CYS A 531 SITE 1 AC2 5 ASP A 386 GLU A 388 ASP A 535 HOH A 830 SITE 2 AC2 5 HOH A 831 CRYST1 115.170 115.170 56.920 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008683 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008683 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017569 0.00000