HEADER ELECTRON TRANSPORT 05-SEP-12 4GYD TITLE NOSTOC SP CYTOCHROME C6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOCHROME C6; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: CYTOCHROME C-553, CYTOCHROME C553, SOLUBLE CYTOCHROME F; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC; SOURCE 3 ORGANISM_TAXID: 103690; SOURCE 4 STRAIN: PCC 7120; SOURCE 5 GENE: PETJ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ELECTRON TRANSPORT CHAIN, METAL ION BINDING, THYLAKOID, ELECTRON KEYWDS 2 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR P.SKUBAK,M.UBBINK,D.CAVAZZINI,G.L.ROSSI,N.S.PANNU REVDAT 3 02-OCT-19 4GYD 1 COMPND HET HETNAM HETSYN REVDAT 3 2 1 FORMUL LINK SITE ATOM REVDAT 2 25-JAN-17 4GYD 1 JRNL REVDAT 1 11-SEP-13 4GYD 0 JRNL AUTH I.DIAZ-MORENO,R.HULSKER,P.SKUBAK,J.M.FOERSTER,D.CAVAZZINI, JRNL AUTH 2 M.G.FINIGUERRA,A.DIAZ-QUINTANA,B.MORENO-BELTRAN,G.L.ROSSI, JRNL AUTH 3 G.M.ULLMANN,N.S.PANNU,M.A.DE LA ROSA,M.UBBINK JRNL TITL THE DYNAMIC COMPLEX OF CYTOCHROME C6 AND CYTOCHROME F JRNL TITL 2 STUDIED WITH PARAMAGNETIC NMR SPECTROSCOPY JRNL REF BIOCHIM.BIOPHYS.ACTA V.1837 1305 2014 JRNL REFN ISSN 0006-3002 JRNL PMID 24685428 JRNL DOI 10.1016/J.BBABIO.2014.03.009 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0027 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 44311 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2367 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3163 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.72 REMARK 3 BIN R VALUE (WORKING SET) : 0.2100 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3840 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 258 REMARK 3 SOLVENT ATOMS : 500 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.127 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.080 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.479 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4194 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4002 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5724 ; 1.929 ; 2.046 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9192 ; 1.042 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 510 ; 6.023 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;40.729 ;26.538 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 702 ;13.419 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;21.221 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 582 ; 0.159 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4884 ; 0.016 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 942 ; 0.021 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4GYD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074787. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44311 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 17.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK AFRO/CRUNCH2/BP3/DM/ARP-WARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, 2.3M AMMONIUM SULPHATE, REMARK 280 100MM LITHIUM SULPHATE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.86050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.90150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.86050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.90150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 55 106.59 -161.50 REMARK 500 ASN A 56 -120.60 61.36 REMARK 500 TRP A 85 77.20 -103.14 REMARK 500 LYS B 29 69.05 -101.89 REMARK 500 TYR B 42 56.26 -90.72 REMARK 500 LYS B 55 116.41 -163.39 REMARK 500 ASN B 56 -124.05 55.01 REMARK 500 LYS C 29 71.46 -101.95 REMARK 500 ASN C 56 -121.44 54.51 REMARK 500 ALA C 83 -106.43 -118.56 REMARK 500 ASN D 56 -121.80 52.74 REMARK 500 ALA D 83 -71.11 -127.56 REMARK 500 TRP D 85 75.85 -112.72 REMARK 500 LYS E 55 119.63 -160.78 REMARK 500 ASN E 56 -127.63 54.36 REMARK 500 ALA E 83 -69.52 -135.60 REMARK 500 GLN F 26 87.16 -158.18 REMARK 500 LYS F 29 62.13 -118.88 REMARK 500 LYS F 55 117.53 -161.06 REMARK 500 ASN F 56 -123.28 56.16 REMARK 500 ALA F 83 -104.33 -110.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 18 NE2 REMARK 620 2 HEC A 200 NA 92.3 REMARK 620 3 HEC A 200 NB 88.3 90.6 REMARK 620 4 HEC A 200 NC 87.4 179.4 89.9 REMARK 620 5 HEC A 200 ND 92.9 88.8 178.7 90.6 REMARK 620 6 MET A 58 SD 170.8 96.0 87.6 84.3 91.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 18 NE2 REMARK 620 2 HEC B 200 NA 91.3 REMARK 620 3 HEC B 200 NB 90.0 89.3 REMARK 620 4 HEC B 200 NC 89.2 178.9 89.7 REMARK 620 5 HEC B 200 ND 90.9 91.5 178.8 89.5 REMARK 620 6 MET B 58 SD 174.1 83.2 92.1 96.3 87.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 18 NE2 REMARK 620 2 HEC C 200 NA 93.6 REMARK 620 3 HEC C 200 NB 88.0 90.4 REMARK 620 4 HEC C 200 NC 85.3 178.7 88.9 REMARK 620 5 HEC C 200 ND 93.1 90.3 178.6 90.4 REMARK 620 6 MET C 58 SD 174.8 90.7 89.0 90.4 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 18 NE2 REMARK 620 2 HEC D 200 NA 95.0 REMARK 620 3 HEC D 200 NB 90.2 89.5 REMARK 620 4 HEC D 200 NC 84.8 179.4 90.0 REMARK 620 5 HEC D 200 ND 89.6 90.3 179.7 90.2 REMARK 620 6 MET D 58 SD 169.4 95.3 87.4 84.9 92.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC E 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 18 NE2 REMARK 620 2 HEC E 200 NA 93.2 REMARK 620 3 HEC E 200 NB 87.4 88.6 REMARK 620 4 HEC E 200 NC 87.0 179.1 90.5 REMARK 620 5 HEC E 200 ND 93.9 92.1 178.5 88.8 REMARK 620 6 MET E 58 SD 169.7 96.2 88.7 83.6 90.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC F 200 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS F 18 NE2 REMARK 620 2 HEC F 200 NA 92.4 REMARK 620 3 HEC F 200 NB 91.4 89.8 REMARK 620 4 HEC F 200 NC 87.5 179.4 90.7 REMARK 620 5 HEC F 200 ND 89.7 89.7 178.8 89.7 REMARK 620 6 MET F 58 SD 173.6 81.8 91.3 98.3 87.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM B 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM C 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM D 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM E 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM F 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1C6S RELATED DB: PDB REMARK 900 RELATED ID: 4H0K RELATED DB: PDB REMARK 900 RELATED ID: 4H0J RELATED DB: PDB DBREF 4GYD A 1 86 UNP P0A3X7 CYC6_NOSS1 26 111 DBREF 4GYD B 1 86 UNP P0A3X7 CYC6_NOSS1 26 111 DBREF 4GYD C 1 86 UNP P0A3X7 CYC6_NOSS1 26 111 DBREF 4GYD D 1 86 UNP P0A3X7 CYC6_NOSS1 26 111 DBREF 4GYD E 1 86 UNP P0A3X7 CYC6_NOSS1 26 111 DBREF 4GYD F 1 86 UNP P0A3X7 CYC6_NOSS1 26 111 SEQRES 1 A 86 ALA ASP SER VAL ASN GLY ALA LYS ILE PHE SER ALA ASN SEQRES 2 A 86 CYS ALA SER CYS HIS ALA GLY GLY LYS ASN LEU VAL GLN SEQRES 3 A 86 ALA GLN LYS THR LEU LYS LYS ALA ASP LEU GLU LYS TYR SEQRES 4 A 86 GLY MET TYR SER ALA GLU ALA ILE ILE ALA GLN VAL THR SEQRES 5 A 86 ASN GLY LYS ASN ALA MET PRO ALA PHE LYS GLY ARG LEU SEQRES 6 A 86 LYS PRO GLU GLN ILE GLU ASP VAL ALA ALA TYR VAL LEU SEQRES 7 A 86 GLY LYS ALA ASP ALA ASP TRP LYS SEQRES 1 B 86 ALA ASP SER VAL ASN GLY ALA LYS ILE PHE SER ALA ASN SEQRES 2 B 86 CYS ALA SER CYS HIS ALA GLY GLY LYS ASN LEU VAL GLN SEQRES 3 B 86 ALA GLN LYS THR LEU LYS LYS ALA ASP LEU GLU LYS TYR SEQRES 4 B 86 GLY MET TYR SER ALA GLU ALA ILE ILE ALA GLN VAL THR SEQRES 5 B 86 ASN GLY LYS ASN ALA MET PRO ALA PHE LYS GLY ARG LEU SEQRES 6 B 86 LYS PRO GLU GLN ILE GLU ASP VAL ALA ALA TYR VAL LEU SEQRES 7 B 86 GLY LYS ALA ASP ALA ASP TRP LYS SEQRES 1 C 86 ALA ASP SER VAL ASN GLY ALA LYS ILE PHE SER ALA ASN SEQRES 2 C 86 CYS ALA SER CYS HIS ALA GLY GLY LYS ASN LEU VAL GLN SEQRES 3 C 86 ALA GLN LYS THR LEU LYS LYS ALA ASP LEU GLU LYS TYR SEQRES 4 C 86 GLY MET TYR SER ALA GLU ALA ILE ILE ALA GLN VAL THR SEQRES 5 C 86 ASN GLY LYS ASN ALA MET PRO ALA PHE LYS GLY ARG LEU SEQRES 6 C 86 LYS PRO GLU GLN ILE GLU ASP VAL ALA ALA TYR VAL LEU SEQRES 7 C 86 GLY LYS ALA ASP ALA ASP TRP LYS SEQRES 1 D 86 ALA ASP SER VAL ASN GLY ALA LYS ILE PHE SER ALA ASN SEQRES 2 D 86 CYS ALA SER CYS HIS ALA GLY GLY LYS ASN LEU VAL GLN SEQRES 3 D 86 ALA GLN LYS THR LEU LYS LYS ALA ASP LEU GLU LYS TYR SEQRES 4 D 86 GLY MET TYR SER ALA GLU ALA ILE ILE ALA GLN VAL THR SEQRES 5 D 86 ASN GLY LYS ASN ALA MET PRO ALA PHE LYS GLY ARG LEU SEQRES 6 D 86 LYS PRO GLU GLN ILE GLU ASP VAL ALA ALA TYR VAL LEU SEQRES 7 D 86 GLY LYS ALA ASP ALA ASP TRP LYS SEQRES 1 E 86 ALA ASP SER VAL ASN GLY ALA LYS ILE PHE SER ALA ASN SEQRES 2 E 86 CYS ALA SER CYS HIS ALA GLY GLY LYS ASN LEU VAL GLN SEQRES 3 E 86 ALA GLN LYS THR LEU LYS LYS ALA ASP LEU GLU LYS TYR SEQRES 4 E 86 GLY MET TYR SER ALA GLU ALA ILE ILE ALA GLN VAL THR SEQRES 5 E 86 ASN GLY LYS ASN ALA MET PRO ALA PHE LYS GLY ARG LEU SEQRES 6 E 86 LYS PRO GLU GLN ILE GLU ASP VAL ALA ALA TYR VAL LEU SEQRES 7 E 86 GLY LYS ALA ASP ALA ASP TRP LYS SEQRES 1 F 86 ALA ASP SER VAL ASN GLY ALA LYS ILE PHE SER ALA ASN SEQRES 2 F 86 CYS ALA SER CYS HIS ALA GLY GLY LYS ASN LEU VAL GLN SEQRES 3 F 86 ALA GLN LYS THR LEU LYS LYS ALA ASP LEU GLU LYS TYR SEQRES 4 F 86 GLY MET TYR SER ALA GLU ALA ILE ILE ALA GLN VAL THR SEQRES 5 F 86 ASN GLY LYS ASN ALA MET PRO ALA PHE LYS GLY ARG LEU SEQRES 6 F 86 LYS PRO GLU GLN ILE GLU ASP VAL ALA ALA TYR VAL LEU SEQRES 7 F 86 GLY LYS ALA ASP ALA ASP TRP LYS HET HEC A 200 43 HET HEC B 200 43 HET HEC C 200 43 HET HEC D 200 43 HET HEC E 200 43 HET HEC F 200 43 HETNAM HEC HEME C FORMUL 7 HEC 6(C34 H34 FE N4 O4) FORMUL 13 HOH *500(H2 O) HELIX 1 1 ASP A 2 CYS A 14 1 13 HELIX 2 2 CYS A 14 ALA A 19 1 6 HELIX 3 3 GLY A 20 LYS A 22 5 3 HELIX 4 4 LYS A 32 TYR A 39 1 8 HELIX 5 5 SER A 43 GLY A 54 1 12 HELIX 6 6 LYS A 66 ASP A 84 1 19 HELIX 7 7 ASP B 2 CYS B 14 1 13 HELIX 8 8 CYS B 14 ALA B 19 1 6 HELIX 9 9 GLY B 20 LYS B 22 5 3 HELIX 10 10 LYS B 32 TYR B 39 1 8 HELIX 11 11 SER B 43 GLY B 54 1 12 HELIX 12 12 LYS B 66 ASP B 84 1 19 HELIX 13 13 ASP C 2 CYS C 14 1 13 HELIX 14 14 CYS C 14 ALA C 19 1 6 HELIX 15 15 GLY C 20 LYS C 22 5 3 HELIX 16 16 LYS C 32 TYR C 39 1 8 HELIX 17 17 SER C 43 GLY C 54 1 12 HELIX 18 18 LYS C 66 ASP C 82 1 17 HELIX 19 19 ASP D 2 CYS D 14 1 13 HELIX 20 20 CYS D 14 ALA D 19 1 6 HELIX 21 21 GLY D 20 LYS D 22 5 3 HELIX 22 22 LYS D 32 TYR D 39 1 8 HELIX 23 23 SER D 43 GLY D 54 1 12 HELIX 24 24 LYS D 66 ALA D 83 1 18 HELIX 25 25 ASP E 2 CYS E 14 1 13 HELIX 26 26 CYS E 14 ALA E 19 1 6 HELIX 27 27 GLY E 20 LYS E 22 5 3 HELIX 28 28 LYS E 32 TYR E 39 1 8 HELIX 29 29 SER E 43 GLY E 54 1 12 HELIX 30 30 LYS E 66 ALA E 83 1 18 HELIX 31 31 ASP F 2 CYS F 14 1 13 HELIX 32 32 CYS F 14 ALA F 19 1 6 HELIX 33 33 GLY F 20 LYS F 22 5 3 HELIX 34 34 LYS F 32 TYR F 39 1 8 HELIX 35 35 SER F 43 GLY F 54 1 12 HELIX 36 36 LYS F 66 ALA F 83 1 18 LINK NE2 HIS A 18 FE HEC A 200 1555 1555 2.05 LINK SD MET A 58 FE HEC A 200 1555 1555 2.36 LINK SG CYS A 14 CAB HEC A 200 1555 1555 1.97 LINK SG CYS A 17 CAC HEC A 200 1555 1555 2.13 LINK NE2 HIS B 18 FE HEC B 200 1555 1555 2.06 LINK SD MET B 58 FE HEC B 200 1555 1555 2.30 LINK SG CYS B 14 CAB HEC B 200 1555 1555 1.90 LINK SG CYS B 17 CAC HEC B 200 1555 1555 2.10 LINK NE2 HIS C 18 FE HEC C 200 1555 1555 2.08 LINK SD MET C 58 FE HEC C 200 1555 1555 2.29 LINK SG CYS C 14 CAB HEC C 200 1555 1555 1.89 LINK SG CYS C 17 CAC HEC C 200 1555 1555 2.06 LINK NE2 HIS D 18 FE HEC D 200 1555 1555 2.05 LINK SD MET D 58 FE HEC D 200 1555 1555 2.37 LINK SG CYS D 14 CAB HEC D 200 1555 1555 1.85 LINK SG CYS D 17 CAC HEC D 200 1555 1555 2.16 LINK NE2 HIS E 18 FE HEC E 200 1555 1555 2.05 LINK SD MET E 58 FE HEC E 200 1555 1555 2.42 LINK SG CYS E 14 CAB HEC E 200 1555 1555 1.99 LINK SG CYS E 17 CAC HEC E 200 1555 1555 2.07 LINK NE2 HIS F 18 FE HEC F 200 1555 1555 2.09 LINK SD MET F 58 FE HEC F 200 1555 1555 2.28 LINK SG CYS F 14 CAB HEC F 200 1555 1555 1.97 LINK SG CYS F 17 CAC HEC F 200 1555 1555 2.11 SITE 1 AC1 21 ASN A 13 CYS A 14 CYS A 17 HIS A 18 SITE 2 AC1 21 ASN A 23 VAL A 25 LYS A 29 THR A 30 SITE 3 AC1 21 LEU A 31 TYR A 39 MET A 41 GLN A 50 SITE 4 AC1 21 VAL A 51 LYS A 55 ASN A 56 MET A 58 SITE 5 AC1 21 PRO A 59 HOH A 330 HOH A 384 ALA E 57 SITE 6 AC1 21 HEC E 200 SITE 1 AC2 21 ASN B 13 CYS B 14 CYS B 17 HIS B 18 SITE 2 AC2 21 ASN B 23 VAL B 25 LYS B 29 THR B 30 SITE 3 AC2 21 LEU B 31 TYR B 39 MET B 41 GLN B 50 SITE 4 AC2 21 VAL B 51 LYS B 55 ASN B 56 MET B 58 SITE 5 AC2 21 HOH B 301 HOH B 320 HOH B 324 ALA C 57 SITE 6 AC2 21 HEC C 200 SITE 1 AC3 20 ALA B 57 HEC B 200 ASN C 13 CYS C 14 SITE 2 AC3 20 CYS C 17 HIS C 18 ASN C 23 VAL C 25 SITE 3 AC3 20 LYS C 29 THR C 30 LEU C 31 TYR C 39 SITE 4 AC3 20 GLN C 50 LYS C 55 ASN C 56 MET C 58 SITE 5 AC3 20 PRO C 59 HOH C 318 HOH C 344 HOH C 366 SITE 1 AC4 20 ASN D 13 CYS D 14 CYS D 17 HIS D 18 SITE 2 AC4 20 ASN D 23 LYS D 29 THR D 30 LEU D 31 SITE 3 AC4 20 TYR D 39 MET D 41 GLN D 50 VAL D 51 SITE 4 AC4 20 LYS D 55 ALA D 57 MET D 58 PRO D 59 SITE 5 AC4 20 HOH D 304 HOH D 318 HOH D 357 HOH D 365 SITE 1 AC5 20 ALA A 57 HEC A 200 ASN E 13 CYS E 14 SITE 2 AC5 20 CYS E 17 HIS E 18 ASN E 23 VAL E 25 SITE 3 AC5 20 LYS E 29 THR E 30 LEU E 31 TYR E 39 SITE 4 AC5 20 GLN E 50 VAL E 51 LYS E 55 ASN E 56 SITE 5 AC5 20 MET E 58 PRO E 59 HOH E 304 HOH E 325 SITE 1 AC6 21 HOH B 318 ASN F 13 CYS F 14 CYS F 17 SITE 2 AC6 21 HIS F 18 ASN F 23 LYS F 29 THR F 30 SITE 3 AC6 21 LEU F 31 ASP F 35 TYR F 39 MET F 41 SITE 4 AC6 21 GLN F 50 VAL F 51 LYS F 55 ASN F 56 SITE 5 AC6 21 ALA F 57 MET F 58 HOH F 323 HOH F 338 SITE 6 AC6 21 HOH F 362 CRYST1 77.721 79.803 80.154 90.00 90.00 90.00 P 21 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012866 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012531 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012476 0.00000