HEADER HYDROLASE 05-SEP-12 4GYO TITLE CRYSTAL STRUCTURE OF RAP PROTEIN COMPLEXED WITH COMPETENCE AND TITLE 2 SPORULATION FACTOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR ASPARTATE PHOSPHATASE J; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.1.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CSF PEPTIDE; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS; SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: BSU02820, RAPJ, YCDE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: SYNTHETICALLY PRODUCED MATURE PEPTIDE CSF KEYWDS TETRATRICOPEPTIDE REPEAT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.PARASHAR,M.B.NEIDITCH REVDAT 3 28-FEB-24 4GYO 1 REMARK REVDAT 2 10-APR-13 4GYO 1 JRNL REVDAT 1 03-APR-13 4GYO 0 JRNL AUTH V.PARASHAR,P.D.JEFFREY,M.B.NEIDITCH JRNL TITL CONFORMATIONAL CHANGE-INDUCED REPEAT DOMAIN EXPANSION JRNL TITL 2 REGULATES RAP PHOSPHATASE QUORUM-SENSING SIGNAL RECEPTORS. JRNL REF PLOS BIOL. V. 11 01512 2013 JRNL REFN ISSN 1544-9173 JRNL PMID 23526881 JRNL DOI 10.1371/JOURNAL.PBIO.1001512 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 47142 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.510 REMARK 3 FREE R VALUE TEST SET COUNT : 2125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3226 - 5.3240 0.99 3252 154 0.1944 0.2038 REMARK 3 2 5.3240 - 4.2266 0.99 3071 145 0.1614 0.2011 REMARK 3 3 4.2266 - 3.6926 1.00 3050 145 0.1636 0.1927 REMARK 3 4 3.6926 - 3.3551 1.00 3013 141 0.1810 0.2038 REMARK 3 5 3.3551 - 3.1147 1.00 3007 142 0.1986 0.2456 REMARK 3 6 3.1147 - 2.9311 1.00 2998 142 0.2048 0.2397 REMARK 3 7 2.9311 - 2.7843 1.00 2977 139 0.2158 0.2316 REMARK 3 8 2.7843 - 2.6631 1.00 2972 141 0.2165 0.2755 REMARK 3 9 2.6631 - 2.5606 1.00 2965 140 0.2052 0.2646 REMARK 3 10 2.5606 - 2.4722 1.00 2966 140 0.1965 0.2538 REMARK 3 11 2.4722 - 2.3949 1.00 2959 140 0.2001 0.2685 REMARK 3 12 2.3949 - 2.3265 1.00 2952 140 0.2027 0.2480 REMARK 3 13 2.3265 - 2.2652 1.00 2963 139 0.2115 0.2679 REMARK 3 14 2.2652 - 2.2100 1.00 2949 139 0.2085 0.2681 REMARK 3 15 2.2100 - 2.1597 1.00 2923 138 0.2106 0.2607 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 38.54 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.92230 REMARK 3 B22 (A**2) : 1.92230 REMARK 3 B33 (A**2) : -3.84470 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6270 REMARK 3 ANGLE : 0.480 8441 REMARK 3 CHIRALITY : 0.041 871 REMARK 3 PLANARITY : 0.001 1087 REMARK 3 DIHEDRAL : 12.078 2330 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 6:67) REMARK 3 ORIGIN FOR THE GROUP (A): 50.5613 65.1381 59.1759 REMARK 3 T TENSOR REMARK 3 T11: 0.1552 T22: 0.1426 REMARK 3 T33: 0.3224 T12: -0.1977 REMARK 3 T13: 0.3016 T23: 0.1132 REMARK 3 L TENSOR REMARK 3 L11: 3.4623 L22: 3.4566 REMARK 3 L33: 4.1055 L12: 0.0718 REMARK 3 L13: -0.0132 L23: -0.3526 REMARK 3 S TENSOR REMARK 3 S11: -0.2486 S12: 0.2852 S13: 1.0339 REMARK 3 S21: 0.0132 S22: 0.2094 S23: -0.9967 REMARK 3 S31: -0.9304 S32: 0.0818 S33: 0.1465 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 68:172) REMARK 3 ORIGIN FOR THE GROUP (A): 36.6349 62.5947 71.5932 REMARK 3 T TENSOR REMARK 3 T11: 0.2641 T22: 0.1484 REMARK 3 T33: 0.2171 T12: 0.0357 REMARK 3 T13: 0.0412 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 2.7148 L22: 2.2993 REMARK 3 L33: 5.2324 L12: -0.1712 REMARK 3 L13: -1.2717 L23: -0.4656 REMARK 3 S TENSOR REMARK 3 S11: 0.1684 S12: 0.2846 S13: 0.4289 REMARK 3 S21: -0.2822 S22: 0.0599 S23: 0.0420 REMARK 3 S31: -0.7235 S32: -0.2691 S33: -0.0820 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 173:252) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0294 43.6197 82.6280 REMARK 3 T TENSOR REMARK 3 T11: 0.2436 T22: 0.0932 REMARK 3 T33: 0.2113 T12: 0.0236 REMARK 3 T13: -0.0085 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 3.4434 L22: 2.2818 REMARK 3 L33: 3.7586 L12: -0.1707 REMARK 3 L13: -0.2208 L23: -0.3150 REMARK 3 S TENSOR REMARK 3 S11: -0.0272 S12: -0.1061 S13: -0.3145 REMARK 3 S21: 0.0126 S22: -0.0472 S23: -0.0794 REMARK 3 S31: 0.5316 S32: 0.0873 S33: 0.0706 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 253:329) REMARK 3 ORIGIN FOR THE GROUP (A): 48.9179 56.2456 97.5952 REMARK 3 T TENSOR REMARK 3 T11: 0.1770 T22: 0.2982 REMARK 3 T33: 0.2806 T12: -0.0108 REMARK 3 T13: -0.0546 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 3.2840 L22: 3.0995 REMARK 3 L33: 4.5183 L12: -1.2807 REMARK 3 L13: -0.1484 L23: 0.9780 REMARK 3 S TENSOR REMARK 3 S11: -0.0625 S12: -0.1846 S13: 0.1947 REMARK 3 S21: 0.3172 S22: 0.1621 S23: -0.2372 REMARK 3 S31: -0.2095 S32: 0.7511 S33: -0.0453 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 330:371) REMARK 3 ORIGIN FOR THE GROUP (A): 32.5975 58.6373 102.7166 REMARK 3 T TENSOR REMARK 3 T11: 0.2043 T22: 0.2382 REMARK 3 T33: 0.2191 T12: 0.0679 REMARK 3 T13: -0.0215 T23: -0.0956 REMARK 3 L TENSOR REMARK 3 L11: 4.0840 L22: 1.4437 REMARK 3 L33: 8.3876 L12: 0.2113 REMARK 3 L13: 0.3957 L23: -1.1710 REMARK 3 S TENSOR REMARK 3 S11: -0.2126 S12: -0.4100 S13: 0.1043 REMARK 3 S21: 0.0945 S22: 0.0532 S23: -0.1302 REMARK 3 S31: -0.0029 S32: -0.2917 S33: 0.1346 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 7:67) REMARK 3 ORIGIN FOR THE GROUP (A): 72.5540 45.1625 75.8653 REMARK 3 T TENSOR REMARK 3 T11: 0.3267 T22: 0.3629 REMARK 3 T33: 0.7903 T12: -0.0351 REMARK 3 T13: -0.2145 T23: -0.0622 REMARK 3 L TENSOR REMARK 3 L11: 4.4518 L22: 1.8472 REMARK 3 L33: 4.8871 L12: 0.0963 REMARK 3 L13: -0.0083 L23: -0.7493 REMARK 3 S TENSOR REMARK 3 S11: 0.1983 S12: 0.2333 S13: -0.7279 REMARK 3 S21: -0.4652 S22: -0.4088 S23: 0.9725 REMARK 3 S31: 0.5124 S32: -0.6682 S33: 0.2254 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 68:94) REMARK 3 ORIGIN FOR THE GROUP (A): 80.1214 37.9997 85.1919 REMARK 3 T TENSOR REMARK 3 T11: 0.5424 T22: 0.3822 REMARK 3 T33: 0.8285 T12: -0.2086 REMARK 3 T13: -0.0466 T23: 0.2244 REMARK 3 L TENSOR REMARK 3 L11: 2.9788 L22: 4.5658 REMARK 3 L33: 6.3710 L12: -2.1454 REMARK 3 L13: -1.2203 L23: 4.1933 REMARK 3 S TENSOR REMARK 3 S11: 0.5589 S12: -0.7589 S13: -1.8042 REMARK 3 S21: 0.5602 S22: -0.2395 S23: 0.3209 REMARK 3 S31: 1.5982 S32: 0.2298 S33: 0.2629 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 95:195) REMARK 3 ORIGIN FOR THE GROUP (A): 92.7249 53.7181 80.0583 REMARK 3 T TENSOR REMARK 3 T11: 0.2172 T22: 0.1937 REMARK 3 T33: 0.2455 T12: 0.0245 REMARK 3 T13: -0.0136 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.4312 L22: 3.9123 REMARK 3 L33: 3.1734 L12: 1.1244 REMARK 3 L13: 1.3850 L23: 1.1973 REMARK 3 S TENSOR REMARK 3 S11: 0.0516 S12: 0.3217 S13: -0.3753 REMARK 3 S21: -0.3684 S22: 0.0556 S23: 0.1646 REMARK 3 S31: 0.2225 S32: -0.0563 S33: -0.1144 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 196:233) REMARK 3 ORIGIN FOR THE GROUP (A): 90.1122 70.2445 89.8022 REMARK 3 T TENSOR REMARK 3 T11: 0.2891 T22: 0.1343 REMARK 3 T33: 0.2809 T12: 0.0487 REMARK 3 T13: -0.0001 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 9.1089 L22: 2.9075 REMARK 3 L33: 3.6459 L12: 1.5449 REMARK 3 L13: 0.9087 L23: -0.2182 REMARK 3 S TENSOR REMARK 3 S11: -0.1156 S12: 0.0494 S13: 0.5817 REMARK 3 S21: -0.2122 S22: 0.0705 S23: 0.1466 REMARK 3 S31: -0.1972 S32: -0.0431 S33: 0.0240 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 234:307) REMARK 3 ORIGIN FOR THE GROUP (A): 88.0067 63.1652 106.1187 REMARK 3 T TENSOR REMARK 3 T11: 0.2006 T22: 0.2680 REMARK 3 T33: 0.2145 T12: 0.0405 REMARK 3 T13: 0.1031 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 2.8869 L22: 2.3215 REMARK 3 L33: 4.8248 L12: 0.2424 REMARK 3 L13: 1.7351 L23: -0.3193 REMARK 3 S TENSOR REMARK 3 S11: -0.0032 S12: -0.4925 S13: 0.0396 REMARK 3 S21: 0.2249 S22: -0.0575 S23: 0.1821 REMARK 3 S31: 0.0339 S32: -0.5856 S33: 0.0499 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 308:329) REMARK 3 ORIGIN FOR THE GROUP (A): 98.7512 50.5709 110.2662 REMARK 3 T TENSOR REMARK 3 T11: 0.3760 T22: 0.3308 REMARK 3 T33: 0.3161 T12: 0.1054 REMARK 3 T13: 0.0715 T23: 0.1270 REMARK 3 L TENSOR REMARK 3 L11: 5.5672 L22: 7.2185 REMARK 3 L33: 3.4000 L12: 0.0816 REMARK 3 L13: 1.4189 L23: 4.2016 REMARK 3 S TENSOR REMARK 3 S11: -0.0488 S12: -0.6629 S13: -0.7357 REMARK 3 S21: 0.8980 S22: -0.0557 S23: -0.3048 REMARK 3 S31: 1.0804 S32: -0.4194 S33: -0.0056 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 330:371) REMARK 3 ORIGIN FOR THE GROUP (A): 107.8611 55.4894 105.6242 REMARK 3 T TENSOR REMARK 3 T11: 0.1975 T22: 0.2277 REMARK 3 T33: 0.1732 T12: 0.0396 REMARK 3 T13: 0.0334 T23: 0.0857 REMARK 3 L TENSOR REMARK 3 L11: 6.7680 L22: 4.9376 REMARK 3 L33: 8.3152 L12: 1.2023 REMARK 3 L13: 3.6509 L23: 3.9315 REMARK 3 S TENSOR REMARK 3 S11: -0.4640 S12: -0.2338 S13: 0.1853 REMARK 3 S21: -0.0396 S22: 0.2404 S23: 0.1107 REMARK 3 S31: -0.0841 S32: 0.2437 S33: 0.1619 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074798. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47237 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 4.390 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 MM TRIS (PH 8.0), 133 MM KCL, 4 MM REMARK 280 DTT, 294 MM MAGNESIUM CHLORIDE, 2% BENZAMIDINE HYDROCHLORIDE, 9% REMARK 280 PEG 3000, 100 MM SODIUM CACODYLATE (PH 6.4), VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 112.90250 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.36250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.36250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 169.35375 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.36250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.36250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.45125 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.36250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.36250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 169.35375 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.36250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.36250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.45125 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 112.90250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -86.72500 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 582 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 ALA A 3 REMARK 465 LYS A 4 REMARK 465 ILE A 5 REMARK 465 ASP A 72 REMARK 465 SER A 73 REMARK 465 ASP A 74 REMARK 465 THR A 75 REMARK 465 LYS A 76 REMARK 465 PRO A 77 REMARK 465 GLN A 90 REMARK 465 GLN A 91 REMARK 465 LYS A 92 REMARK 465 PHE A 372 REMARK 465 GLN A 373 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 ALA B 3 REMARK 465 LYS B 4 REMARK 465 ILE B 5 REMARK 465 PRO B 6 REMARK 465 ASP B 72 REMARK 465 SER B 73 REMARK 465 ASP B 74 REMARK 465 THR B 75 REMARK 465 LYS B 76 REMARK 465 PRO B 77 REMARK 465 PHE B 372 REMARK 465 GLN B 373 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 114 77.13 -101.31 REMARK 500 TYR A 175 70.44 -100.76 REMARK 500 ASN B 114 77.29 -101.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3Q15 RELATED DB: PDB REMARK 900 RELATED ID: 3ULQ RELATED DB: PDB DBREF 4GYO A 1 373 UNP O34327 RAPJ_BACSU 1 373 DBREF 4GYO B 1 373 UNP O34327 RAPJ_BACSU 1 373 DBREF 4GYO C 1 5 PDB 4GYO 4GYO 1 5 DBREF 4GYO D 1 5 PDB 4GYO 4GYO 1 5 SEQRES 1 A 373 MET ARG ALA LYS ILE PRO SER GLU GLU VAL ALA VAL LYS SEQRES 2 A 373 LEU ASN GLU TRP TYR LYS LEU ILE ARG ALA PHE GLU ALA SEQRES 3 A 373 ASP GLN ALA GLU ALA LEU LYS GLN GLU ILE GLU TYR ASP SEQRES 4 A 373 LEU GLU ASP MET GLU GLU ASN GLN ASP LEU LEU LEU TYR SEQRES 5 A 373 PHE SER LEU MET GLU PHE ARG HIS ARG ILE MET LEU ASP SEQRES 6 A 373 LYS LEU MET PRO VAL LYS ASP SER ASP THR LYS PRO PRO SEQRES 7 A 373 PHE SER ASP MET LEU ASN GLU ILE GLU SER ASN GLN GLN SEQRES 8 A 373 LYS LEU THR GLY LEU LEU GLU TYR TYR PHE TYR TYR PHE SEQRES 9 A 373 ARG GLY MET TYR GLU PHE LYS GLN LYS ASN PHE ILE LEU SEQRES 10 A 373 ALA ILE ASP HIS TYR LYS HIS ALA GLU GLU LYS LEU GLU SEQRES 11 A 373 TYR VAL GLU ASP GLU ILE GLU LYS ALA GLU PHE LEU PHE SEQRES 12 A 373 LYS VAL ALA GLU VAL TYR TYR HIS ILE LYS GLN THR TYR SEQRES 13 A 373 PHE SER MET ASN TYR ALA SER GLN ALA LEU ASP ILE TYR SEQRES 14 A 373 THR LYS TYR GLU LEU TYR GLY ARG ARG ARG VAL GLN CYS SEQRES 15 A 373 GLU PHE ILE ILE ALA GLY ASN LEU THR ASP VAL TYR HIS SEQRES 16 A 373 HIS GLU LYS ALA LEU THR HIS LEU CYS SER ALA LEU GLU SEQRES 17 A 373 HIS ALA ARG GLN LEU GLU GLU ALA TYR MET ILE ALA ALA SEQRES 18 A 373 ALA TYR TYR ASN VAL GLY HIS CYS LYS TYR SER LEU GLY SEQRES 19 A 373 ASP TYR LYS GLU ALA GLU GLY TYR PHE LYS THR ALA ALA SEQRES 20 A 373 ALA ILE PHE GLU GLU HIS ASN PHE GLN GLN ALA VAL GLN SEQRES 21 A 373 ALA VAL PHE SER LEU THR HIS ILE TYR CYS LYS GLU GLY SEQRES 22 A 373 LYS TYR ASP LYS ALA VAL GLU ALA TYR ASP ARG GLY ILE SEQRES 23 A 373 LYS SER ALA ALA GLU TRP GLU ASP ASP MET TYR LEU THR SEQRES 24 A 373 LYS PHE ARG LEU ILE HIS GLU LEU TYR LEU GLY SER GLY SEQRES 25 A 373 ASP LEU ASN VAL LEU THR GLU CYS PHE ASP LEU LEU GLU SEQRES 26 A 373 SER ARG GLN LEU LEU ALA ASP ALA GLU ASP LEU LEU HIS SEQRES 27 A 373 ASP THR ALA GLU ARG PHE ASN GLN LEU GLU HIS TYR GLU SEQRES 28 A 373 SER ALA ALA PHE PHE TYR ARG ARG LEU MET ASN ILE LYS SEQRES 29 A 373 LYS LYS LEU ALA GLU GLN ARG PHE GLN SEQRES 1 B 373 MET ARG ALA LYS ILE PRO SER GLU GLU VAL ALA VAL LYS SEQRES 2 B 373 LEU ASN GLU TRP TYR LYS LEU ILE ARG ALA PHE GLU ALA SEQRES 3 B 373 ASP GLN ALA GLU ALA LEU LYS GLN GLU ILE GLU TYR ASP SEQRES 4 B 373 LEU GLU ASP MET GLU GLU ASN GLN ASP LEU LEU LEU TYR SEQRES 5 B 373 PHE SER LEU MET GLU PHE ARG HIS ARG ILE MET LEU ASP SEQRES 6 B 373 LYS LEU MET PRO VAL LYS ASP SER ASP THR LYS PRO PRO SEQRES 7 B 373 PHE SER ASP MET LEU ASN GLU ILE GLU SER ASN GLN GLN SEQRES 8 B 373 LYS LEU THR GLY LEU LEU GLU TYR TYR PHE TYR TYR PHE SEQRES 9 B 373 ARG GLY MET TYR GLU PHE LYS GLN LYS ASN PHE ILE LEU SEQRES 10 B 373 ALA ILE ASP HIS TYR LYS HIS ALA GLU GLU LYS LEU GLU SEQRES 11 B 373 TYR VAL GLU ASP GLU ILE GLU LYS ALA GLU PHE LEU PHE SEQRES 12 B 373 LYS VAL ALA GLU VAL TYR TYR HIS ILE LYS GLN THR TYR SEQRES 13 B 373 PHE SER MET ASN TYR ALA SER GLN ALA LEU ASP ILE TYR SEQRES 14 B 373 THR LYS TYR GLU LEU TYR GLY ARG ARG ARG VAL GLN CYS SEQRES 15 B 373 GLU PHE ILE ILE ALA GLY ASN LEU THR ASP VAL TYR HIS SEQRES 16 B 373 HIS GLU LYS ALA LEU THR HIS LEU CYS SER ALA LEU GLU SEQRES 17 B 373 HIS ALA ARG GLN LEU GLU GLU ALA TYR MET ILE ALA ALA SEQRES 18 B 373 ALA TYR TYR ASN VAL GLY HIS CYS LYS TYR SER LEU GLY SEQRES 19 B 373 ASP TYR LYS GLU ALA GLU GLY TYR PHE LYS THR ALA ALA SEQRES 20 B 373 ALA ILE PHE GLU GLU HIS ASN PHE GLN GLN ALA VAL GLN SEQRES 21 B 373 ALA VAL PHE SER LEU THR HIS ILE TYR CYS LYS GLU GLY SEQRES 22 B 373 LYS TYR ASP LYS ALA VAL GLU ALA TYR ASP ARG GLY ILE SEQRES 23 B 373 LYS SER ALA ALA GLU TRP GLU ASP ASP MET TYR LEU THR SEQRES 24 B 373 LYS PHE ARG LEU ILE HIS GLU LEU TYR LEU GLY SER GLY SEQRES 25 B 373 ASP LEU ASN VAL LEU THR GLU CYS PHE ASP LEU LEU GLU SEQRES 26 B 373 SER ARG GLN LEU LEU ALA ASP ALA GLU ASP LEU LEU HIS SEQRES 27 B 373 ASP THR ALA GLU ARG PHE ASN GLN LEU GLU HIS TYR GLU SEQRES 28 B 373 SER ALA ALA PHE PHE TYR ARG ARG LEU MET ASN ILE LYS SEQRES 29 B 373 LYS LYS LEU ALA GLU GLN ARG PHE GLN SEQRES 1 C 5 GLU ARG GLY MET THR SEQRES 1 D 5 GLU ARG GLY MET THR HET CL A 401 1 HET CL B 401 1 HETNAM CL CHLORIDE ION FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *277(H2 O) HELIX 1 1 PRO A 6 ALA A 23 1 18 HELIX 2 2 GLU A 25 GLU A 41 1 17 HELIX 3 3 ASN A 46 MET A 68 1 23 HELIX 4 4 PHE A 79 SER A 88 1 10 HELIX 5 5 GLY A 95 GLN A 112 1 18 HELIX 6 6 ASN A 114 GLU A 127 1 14 HELIX 7 7 LYS A 128 VAL A 132 5 5 HELIX 8 8 ASP A 134 ILE A 152 1 19 HELIX 9 9 GLN A 154 TYR A 172 1 19 HELIX 10 10 GLY A 176 VAL A 193 1 18 HELIX 11 11 HIS A 195 GLU A 214 1 20 HELIX 12 12 GLU A 215 GLY A 234 1 20 HELIX 13 13 ASP A 235 HIS A 253 1 19 HELIX 14 14 GLN A 256 GLY A 273 1 18 HELIX 15 15 LYS A 274 TRP A 292 1 19 HELIX 16 16 ASP A 294 LEU A 309 1 16 HELIX 17 17 ASP A 313 ARG A 327 1 15 HELIX 18 18 LEU A 329 LEU A 347 1 19 HELIX 19 19 HIS A 349 GLN A 370 1 22 HELIX 20 20 GLU B 8 ALA B 23 1 16 HELIX 21 21 GLU B 25 ASP B 42 1 18 HELIX 22 22 ASN B 46 MET B 68 1 23 HELIX 23 23 PHE B 79 SER B 88 1 10 HELIX 24 24 GLY B 95 GLN B 112 1 18 HELIX 25 25 ASN B 114 GLU B 127 1 14 HELIX 26 26 LYS B 128 VAL B 132 5 5 HELIX 27 27 ASP B 134 ILE B 152 1 19 HELIX 28 28 GLN B 154 TYR B 172 1 19 HELIX 29 29 GLY B 176 VAL B 193 1 18 HELIX 30 30 HIS B 195 GLU B 214 1 20 HELIX 31 31 GLU B 215 GLY B 234 1 20 HELIX 32 32 ASP B 235 HIS B 253 1 19 HELIX 33 33 GLN B 256 GLY B 273 1 18 HELIX 34 34 LYS B 274 TRP B 292 1 19 HELIX 35 35 ASP B 294 LEU B 309 1 16 HELIX 36 36 ASP B 313 ARG B 327 1 15 HELIX 37 37 LEU B 329 LEU B 347 1 19 HELIX 38 38 HIS B 349 GLN B 370 1 22 SITE 1 AC1 3 ARG A 177 ARG A 178 HOH A 503 SITE 1 AC2 3 ARG B 177 ARG B 178 HOH B 544 CRYST1 86.725 86.725 225.805 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011531 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011531 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004429 0.00000