HEADER HYDROLASE 06-SEP-12 4GZM TITLE CRYSTAL STRUCTURE OF RAC1 F28L MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 2-177; COMPND 5 SYNONYM: RAC1, CELL MIGRATION-INDUCING GENE 5 PROTEIN, RAS-LIKE COMPND 6 PROTEIN TC25, P21-RAC1; COMPND 7 EC: 3.6.5.2; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAC1, TC25, MIG5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)RILP; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET28 KEYWDS ROSSMANN FOLD, GTP BINDING, MEMBRANE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.H.HA,T.J.BOGGON REVDAT 4 13-SEP-23 4GZM 1 REMARK SEQADV LINK REVDAT 3 30-JAN-13 4GZM 1 JRNL REVDAT 2 16-JAN-13 4GZM 1 JRNL REVDAT 1 12-DEC-12 4GZM 0 JRNL AUTH M.J.DAVIS,B.H.HA,E.C.HOLMAN,R.HALABAN,J.SCHLESSINGER, JRNL AUTH 2 T.J.BOGGON JRNL TITL RAC1P29S IS A SPONTANEOUSLY ACTIVATING CANCER-ASSOCIATED JRNL TITL 2 GTPASE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 912 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23284172 JRNL DOI 10.1073/PNAS.1220895110 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 9505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 485 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 710 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.4310 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.4720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2716 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 99.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 106.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 13.76000 REMARK 3 B22 (A**2) : -7.60000 REMARK 3 B33 (A**2) : -6.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.53000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.445 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.573 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 33.989 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2842 ; 0.005 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3884 ; 0.983 ; 2.015 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 346 ; 4.687 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 110 ;35.252 ;24.364 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 478 ;15.304 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;12.142 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 450 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2076 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 4 A 177 3 REMARK 3 1 B 4 B 177 3 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 662 ; 0.010 ; 5.000 REMARK 3 TIGHT THERMAL 1 A (A**2): 696 ; 2.710 ; 0.500 REMARK 3 LOOSE THERMAL 1 A (A**2): 662 ; 3.410 ;10.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4GZM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074832. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97922 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10037 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 27.823 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.11900 REMARK 200 R SYM (I) : 0.11900 REMARK 200 FOR THE DATA SET : 7.5910 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57800 REMARK 200 R SYM FOR SHELL (I) : 0.57800 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3TH5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-18% PEG4000, 8% ISOPROPANOL, PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.40350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -26 REMARK 465 GLY A -25 REMARK 465 SER A -24 REMARK 465 SER A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 LEU A -13 REMARK 465 VAL A -12 REMARK 465 PRO A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 MET A -6 REMARK 465 GLU A -5 REMARK 465 ASN A -4 REMARK 465 LEU A -3 REMARK 465 TYR A -2 REMARK 465 PHE A -1 REMARK 465 GLN A 0 REMARK 465 GLY A 1 REMARK 465 GLN A 2 REMARK 465 ALA A 3 REMARK 465 MET B -26 REMARK 465 GLY B -25 REMARK 465 SER B -24 REMARK 465 SER B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 LEU B -13 REMARK 465 VAL B -12 REMARK 465 PRO B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 MET B -6 REMARK 465 GLU B -5 REMARK 465 ASN B -4 REMARK 465 LEU B -3 REMARK 465 TYR B -2 REMARK 465 PHE B -1 REMARK 465 GLN B 0 REMARK 465 GLY B 1 REMARK 465 GLN B 2 REMARK 465 ALA B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 37 142.13 -179.76 REMARK 500 PHE B 37 142.50 -179.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 17 OG1 REMARK 620 2 THR A 35 OG1 77.6 REMARK 620 3 GSP A1000 O3G 156.9 101.3 REMARK 620 4 GSP A1000 O2B 72.9 148.7 101.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 17 OG1 REMARK 620 2 THR B 35 OG1 79.2 REMARK 620 3 ASP B 57 OD1 99.7 94.0 REMARK 620 4 GSP B1000 O3G 138.8 119.5 113.8 REMARK 620 5 GSP B1000 O2B 71.5 140.4 116.5 72.4 REMARK 620 6 GSP B1000 O2G 92.4 74.6 161.6 62.4 80.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSP A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSP B 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3SBD RELATED DB: PDB REMARK 900 RAC1 P29S MUTANT REMARK 900 RELATED ID: 3SBE RELATED DB: PDB REMARK 900 RAC1 P29S MUTANT REMARK 900 RELATED ID: 3TH5 RELATED DB: PDB REMARK 900 RAC1 WILD-TYPE REMARK 900 RELATED ID: 4GZL RELATED DB: PDB DBREF 4GZM A 2 177 UNP P63000 RAC1_HUMAN 2 177 DBREF 4GZM B 2 177 UNP P63000 RAC1_HUMAN 2 177 SEQADV 4GZM MET A -26 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY A -25 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER A -24 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER A -23 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -22 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -21 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -20 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -19 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -18 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -17 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER A -16 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER A -15 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY A -14 UNP P63000 EXPRESSION TAG SEQADV 4GZM LEU A -13 UNP P63000 EXPRESSION TAG SEQADV 4GZM VAL A -12 UNP P63000 EXPRESSION TAG SEQADV 4GZM PRO A -11 UNP P63000 EXPRESSION TAG SEQADV 4GZM ARG A -10 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY A -9 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER A -8 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS A -7 UNP P63000 EXPRESSION TAG SEQADV 4GZM MET A -6 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLU A -5 UNP P63000 EXPRESSION TAG SEQADV 4GZM ASN A -4 UNP P63000 EXPRESSION TAG SEQADV 4GZM LEU A -3 UNP P63000 EXPRESSION TAG SEQADV 4GZM TYR A -2 UNP P63000 EXPRESSION TAG SEQADV 4GZM PHE A -1 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLN A 0 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY A 1 UNP P63000 EXPRESSION TAG SEQADV 4GZM LEU A 28 UNP P63000 PHE 28 ENGINEERED MUTATION SEQADV 4GZM MET B -26 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY B -25 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER B -24 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER B -23 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -22 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -21 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -20 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -19 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -18 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -17 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER B -16 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER B -15 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY B -14 UNP P63000 EXPRESSION TAG SEQADV 4GZM LEU B -13 UNP P63000 EXPRESSION TAG SEQADV 4GZM VAL B -12 UNP P63000 EXPRESSION TAG SEQADV 4GZM PRO B -11 UNP P63000 EXPRESSION TAG SEQADV 4GZM ARG B -10 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY B -9 UNP P63000 EXPRESSION TAG SEQADV 4GZM SER B -8 UNP P63000 EXPRESSION TAG SEQADV 4GZM HIS B -7 UNP P63000 EXPRESSION TAG SEQADV 4GZM MET B -6 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLU B -5 UNP P63000 EXPRESSION TAG SEQADV 4GZM ASN B -4 UNP P63000 EXPRESSION TAG SEQADV 4GZM LEU B -3 UNP P63000 EXPRESSION TAG SEQADV 4GZM TYR B -2 UNP P63000 EXPRESSION TAG SEQADV 4GZM PHE B -1 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLN B 0 UNP P63000 EXPRESSION TAG SEQADV 4GZM GLY B 1 UNP P63000 EXPRESSION TAG SEQADV 4GZM LEU B 28 UNP P63000 PHE 28 ENGINEERED MUTATION SEQRES 1 A 204 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 204 LEU VAL PRO ARG GLY SER HIS MET GLU ASN LEU TYR PHE SEQRES 3 A 204 GLN GLY GLN ALA ILE LYS CYS VAL VAL VAL GLY ASP GLY SEQRES 4 A 204 ALA VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR SEQRES 5 A 204 ASN ALA LEU PRO GLY GLU TYR ILE PRO THR VAL PHE ASP SEQRES 6 A 204 ASN TYR SER ALA ASN VAL MET VAL ASP GLY LYS PRO VAL SEQRES 7 A 204 ASN LEU GLY LEU TRP ASP THR ALA GLY GLN GLU ASP TYR SEQRES 8 A 204 ASP ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL SEQRES 9 A 204 PHE LEU ILE CYS PHE SER LEU VAL SER PRO ALA SER PHE SEQRES 10 A 204 GLU ASN VAL ARG ALA LYS TRP TYR PRO GLU VAL ARG HIS SEQRES 11 A 204 HIS CYS PRO ASN THR PRO ILE ILE LEU VAL GLY THR LYS SEQRES 12 A 204 LEU ASP LEU ARG ASP ASP LYS ASP THR ILE GLU LYS LEU SEQRES 13 A 204 LYS GLU LYS LYS LEU THR PRO ILE THR TYR PRO GLN GLY SEQRES 14 A 204 LEU ALA MET ALA LYS GLU ILE GLY ALA VAL LYS TYR LEU SEQRES 15 A 204 GLU CYS SER ALA LEU THR GLN ARG GLY LEU LYS THR VAL SEQRES 16 A 204 PHE ASP GLU ALA ILE ARG ALA VAL LEU SEQRES 1 B 204 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 204 LEU VAL PRO ARG GLY SER HIS MET GLU ASN LEU TYR PHE SEQRES 3 B 204 GLN GLY GLN ALA ILE LYS CYS VAL VAL VAL GLY ASP GLY SEQRES 4 B 204 ALA VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR SEQRES 5 B 204 ASN ALA LEU PRO GLY GLU TYR ILE PRO THR VAL PHE ASP SEQRES 6 B 204 ASN TYR SER ALA ASN VAL MET VAL ASP GLY LYS PRO VAL SEQRES 7 B 204 ASN LEU GLY LEU TRP ASP THR ALA GLY GLN GLU ASP TYR SEQRES 8 B 204 ASP ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL SEQRES 9 B 204 PHE LEU ILE CYS PHE SER LEU VAL SER PRO ALA SER PHE SEQRES 10 B 204 GLU ASN VAL ARG ALA LYS TRP TYR PRO GLU VAL ARG HIS SEQRES 11 B 204 HIS CYS PRO ASN THR PRO ILE ILE LEU VAL GLY THR LYS SEQRES 12 B 204 LEU ASP LEU ARG ASP ASP LYS ASP THR ILE GLU LYS LEU SEQRES 13 B 204 LYS GLU LYS LYS LEU THR PRO ILE THR TYR PRO GLN GLY SEQRES 14 B 204 LEU ALA MET ALA LYS GLU ILE GLY ALA VAL LYS TYR LEU SEQRES 15 B 204 GLU CYS SER ALA LEU THR GLN ARG GLY LEU LYS THR VAL SEQRES 16 B 204 PHE ASP GLU ALA ILE ARG ALA VAL LEU HET GSP A1000 32 HET MG A1001 1 HET GSP B1000 32 HET MG B1001 1 HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 GSP 2(C10 H16 N5 O13 P3 S) FORMUL 4 MG 2(MG 2+) HELIX 1 1 GLY A 15 THR A 25 1 11 HELIX 2 2 GLN A 61 ASP A 65 5 5 HELIX 3 3 ARG A 68 TYR A 72 5 5 HELIX 4 4 SER A 86 LYS A 96 1 11 HELIX 5 5 LYS A 96 CYS A 105 1 10 HELIX 6 6 ASP A 122 LYS A 130 1 9 HELIX 7 7 GLU A 131 LYS A 133 5 3 HELIX 8 8 THR A 138 ILE A 149 1 12 HELIX 9 9 GLY A 164 LEU A 177 1 14 HELIX 10 10 GLY B 15 THR B 25 1 11 HELIX 11 11 GLN B 61 ASP B 65 5 5 HELIX 12 12 ARG B 68 TYR B 72 5 5 HELIX 13 13 SER B 86 LYS B 96 1 11 HELIX 14 14 LYS B 96 CYS B 105 1 10 HELIX 15 15 ASP B 122 LYS B 130 1 9 HELIX 16 16 GLU B 131 LYS B 133 5 3 HELIX 17 17 THR B 138 ILE B 149 1 12 HELIX 18 18 GLY B 164 LEU B 177 1 14 SHEET 1 A 6 TYR A 40 VAL A 46 0 SHEET 2 A 6 LYS A 49 ASP A 57 -1 O LEU A 55 N TYR A 40 SHEET 3 A 6 LYS A 5 GLY A 10 1 N CYS A 6 O TRP A 56 SHEET 4 A 6 VAL A 77 SER A 83 1 O LEU A 79 N VAL A 9 SHEET 5 A 6 ILE A 110 THR A 115 1 O ILE A 111 N ILE A 80 SHEET 6 A 6 LYS A 153 GLU A 156 1 O LEU A 155 N GLY A 114 SHEET 1 B 6 TYR B 40 VAL B 46 0 SHEET 2 B 6 LYS B 49 ASP B 57 -1 O LEU B 55 N TYR B 40 SHEET 3 B 6 LYS B 5 GLY B 10 1 N CYS B 6 O TRP B 56 SHEET 4 B 6 VAL B 77 SER B 83 1 O LEU B 79 N VAL B 9 SHEET 5 B 6 ILE B 110 THR B 115 1 O ILE B 111 N ILE B 80 SHEET 6 B 6 LYS B 153 GLU B 156 1 O LEU B 155 N GLY B 114 LINK OG1 THR A 17 MG MG A1001 1555 1555 2.09 LINK OG1 THR A 35 MG MG A1001 1555 1555 2.22 LINK O3G GSP A1000 MG MG A1001 1555 1555 1.95 LINK O2B GSP A1000 MG MG A1001 1555 1555 2.26 LINK OG1 THR B 17 MG MG B1001 1555 1555 2.12 LINK OG1 THR B 35 MG MG B1001 1555 1555 2.14 LINK OD1 ASP B 57 MG MG B1001 1555 1555 2.99 LINK O3G GSP B1000 MG MG B1001 1555 1555 2.39 LINK O2B GSP B1000 MG MG B1001 1555 1555 2.62 LINK O2G GSP B1000 MG MG B1001 1555 1555 2.68 SITE 1 AC1 19 ASP A 11 GLY A 12 ALA A 13 VAL A 14 SITE 2 AC1 19 GLY A 15 LYS A 16 THR A 17 CYS A 18 SITE 3 AC1 19 TYR A 32 PRO A 34 THR A 35 THR A 58 SITE 4 AC1 19 GLY A 60 ASP A 118 LEU A 119 SER A 158 SITE 5 AC1 19 ALA A 159 LEU A 160 MG A1001 SITE 1 AC2 4 THR A 17 THR A 35 ASP A 57 GSP A1000 SITE 1 AC3 17 ASP B 11 ALA B 13 VAL B 14 GLY B 15 SITE 2 AC3 17 LYS B 16 THR B 17 CYS B 18 TYR B 32 SITE 3 AC3 17 ILE B 33 PRO B 34 THR B 35 ASP B 118 SITE 4 AC3 17 LEU B 119 SER B 158 ALA B 159 LEU B 160 SITE 5 AC3 17 MG B1001 SITE 1 AC4 5 THR B 17 THR B 35 ASP B 57 THR B 58 SITE 2 AC4 5 GSP B1000 CRYST1 40.094 98.807 51.994 90.00 90.21 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024941 0.000000 0.000091 0.00000 SCALE2 0.000000 0.010121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019233 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.999956 0.002016 -0.009197 0.10317 1 MTRIX2 2 -0.001953 -0.999975 -0.006795 48.55853 1 MTRIX3 2 -0.009211 -0.006777 0.999935 26.18795 1