HEADER CELL ADHESION 18-SEP-12 4H5S TITLE COMPLEX STRUCTURE OF NECL-2 AND CRTAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOTOXIC AND REGULATORY T-CELL MOLECULE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 18-117; COMPND 5 SYNONYM: CLASS-I MHC-RESTRICTED T-CELL-ASSOCIATED MOLECULE; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CELL ADHESION MOLECULE 1; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 45-144; COMPND 11 SYNONYM: IMMUNOGLOBULIN SUPERFAMILY MEMBER 4, IGSF4, NECTIN-LIKE COMPND 12 PROTEIN 2, NECL-2, SPERMATOGENIC IMMUNOGLOBULIN SUPERFAMILY, SGIGSF, COMPND 13 SYNAPTIC CELL ADHESION MOLECULE, SYNCAM, TUMOR SUPPRESSOR IN LUNG COMPND 14 CANCER 1, TSLC-1; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CRTAM; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: CADM1, IGSF4, IGSF4A, NECL2, SYNCAM, TSLC1; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS IG FOLD, CELL ADHESION, IMMUNE RECOGNITION EXPDTA X-RAY DIFFRACTION AUTHOR S.ZHANG,G.LU,J.QI,Y.LI,Z.ZHANG,B.ZHANG,J.YAN,G.F.GAO REVDAT 4 20-NOV-24 4H5S 1 REMARK REVDAT 3 24-AUG-22 4H5S 1 JRNL SEQADV REVDAT 2 07-MAY-14 4H5S 1 SHEET REVDAT 1 07-AUG-13 4H5S 0 JRNL AUTH S.ZHANG,G.LU,J.QI,Y.LI,Z.ZHANG,B.ZHANG,Z.FAN,J.YAN,G.F.GAO JRNL TITL COMPETITION OF CELL ADHESION AND IMMUNE RECOGNITION: JRNL TITL 2 INSIGHTS INTO THE INTERACTION BETWEEN CRTAM AND NECTIN-LIKE JRNL TITL 3 2. JRNL REF STRUCTURE V. 21 1430 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23871486 JRNL DOI 10.1016/J.STR.2013.06.006 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7_650) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 29094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1472 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8051 - 3.7755 1.00 2645 119 0.1624 0.1982 REMARK 3 2 3.7755 - 2.9976 1.00 2553 160 0.1561 0.2011 REMARK 3 3 2.9976 - 2.6189 0.99 2553 114 0.1684 0.2178 REMARK 3 4 2.6189 - 2.3796 0.99 2528 139 0.1707 0.1968 REMARK 3 5 2.3796 - 2.2091 0.99 2543 145 0.1641 0.2068 REMARK 3 6 2.2091 - 2.0789 1.00 2525 140 0.1542 0.1925 REMARK 3 7 2.0789 - 1.9748 0.99 2545 123 0.1546 0.1838 REMARK 3 8 1.9748 - 1.8889 0.98 2472 126 0.1590 0.2025 REMARK 3 9 1.8889 - 1.8162 0.96 2434 132 0.1836 0.2498 REMARK 3 10 1.8162 - 1.7535 0.95 2418 131 0.2006 0.2448 REMARK 3 11 1.7535 - 1.6987 0.95 2406 143 0.2123 0.2606 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 42.99 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.66490 REMARK 3 B22 (A**2) : -0.66490 REMARK 3 B33 (A**2) : 1.32980 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1597 REMARK 3 ANGLE : 1.095 2173 REMARK 3 CHIRALITY : 0.082 263 REMARK 3 PLANARITY : 0.006 275 REMARK 3 DIHEDRAL : 13.461 585 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 5:12) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9654 15.6349 -5.4034 REMARK 3 T TENSOR REMARK 3 T11: 0.1179 T22: 0.1601 REMARK 3 T33: 0.2201 T12: -0.0141 REMARK 3 T13: 0.0200 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 0.7089 L22: 0.1331 REMARK 3 L33: 1.2232 L12: 0.2528 REMARK 3 L13: -0.0870 L23: -0.2443 REMARK 3 S TENSOR REMARK 3 S11: 0.0529 S12: 0.2347 S13: -0.3762 REMARK 3 S21: 0.1339 S22: -0.0779 S23: 0.1994 REMARK 3 S31: -0.0275 S32: 0.3085 S33: -0.0379 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 13:22) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1945 17.1093 2.8141 REMARK 3 T TENSOR REMARK 3 T11: 0.1898 T22: 0.1335 REMARK 3 T33: 0.1904 T12: -0.0155 REMARK 3 T13: -0.0404 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.7387 L22: 0.7024 REMARK 3 L33: 0.1930 L12: 0.0657 REMARK 3 L13: -0.0115 L23: 0.2317 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: 0.2764 S13: -0.1981 REMARK 3 S21: 0.2634 S22: 0.1242 S23: -0.0791 REMARK 3 S31: 0.1627 S32: 0.1190 S33: 0.0166 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 23:29) REMARK 3 ORIGIN FOR THE GROUP (A): 23.9615 30.4885 7.4207 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.1576 REMARK 3 T33: 0.1768 T12: 0.0114 REMARK 3 T13: -0.0752 T23: -0.0338 REMARK 3 L TENSOR REMARK 3 L11: 0.1862 L22: 0.2407 REMARK 3 L33: 0.0108 L12: 0.0561 REMARK 3 L13: 0.0325 L23: -0.0252 REMARK 3 S TENSOR REMARK 3 S11: -0.0600 S12: 0.1853 S13: 0.0483 REMARK 3 S21: -0.0808 S22: -0.0102 S23: -0.1773 REMARK 3 S31: -0.0857 S32: 0.2637 S33: -0.0574 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 30:43) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9729 30.9253 1.6344 REMARK 3 T TENSOR REMARK 3 T11: 0.0843 T22: 0.1074 REMARK 3 T33: 0.0964 T12: 0.0062 REMARK 3 T13: 0.0003 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.4409 L22: 0.5361 REMARK 3 L33: 0.0255 L12: -0.0501 REMARK 3 L13: -0.0945 L23: 0.0282 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: -0.0731 S13: -0.0784 REMARK 3 S21: 0.0180 S22: 0.0302 S23: -0.0167 REMARK 3 S31: -0.0011 S32: -0.0683 S33: -0.0053 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 44:54) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8727 31.1671 8.4163 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1938 REMARK 3 T33: 0.1731 T12: 0.0004 REMARK 3 T13: 0.0216 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.5157 L22: 0.7180 REMARK 3 L33: 0.0731 L12: 0.0007 REMARK 3 L13: -0.1501 L23: -0.1608 REMARK 3 S TENSOR REMARK 3 S11: -0.0349 S12: -0.3455 S13: 0.1066 REMARK 3 S21: 0.2418 S22: 0.0439 S23: 0.3605 REMARK 3 S31: 0.0931 S32: 0.0449 S33: 0.0132 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 55:68) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4465 23.5779 9.5148 REMARK 3 T TENSOR REMARK 3 T11: 0.1181 T22: 0.1454 REMARK 3 T33: 0.1681 T12: -0.0131 REMARK 3 T13: -0.0456 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.5306 L22: 0.2080 REMARK 3 L33: 0.0627 L12: -0.0370 REMARK 3 L13: 0.0164 L23: 0.1146 REMARK 3 S TENSOR REMARK 3 S11: 0.0349 S12: -0.1463 S13: -0.2290 REMARK 3 S21: 0.1766 S22: 0.0539 S23: 0.0340 REMARK 3 S31: 0.1194 S32: -0.0171 S33: -0.0014 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 69:76) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1223 19.4685 -1.6050 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.1579 REMARK 3 T33: 0.1592 T12: -0.0205 REMARK 3 T13: 0.0079 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.3986 L22: 0.6762 REMARK 3 L33: 0.1579 L12: -0.5076 REMARK 3 L13: -0.0305 L23: 0.0922 REMARK 3 S TENSOR REMARK 3 S11: 0.2520 S12: 0.0600 S13: -0.0361 REMARK 3 S21: -0.0789 S22: -0.2400 S23: 0.1957 REMARK 3 S31: -0.0080 S32: -0.0904 S33: 0.0101 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 77:87) REMARK 3 ORIGIN FOR THE GROUP (A): 14.6399 30.2948 -1.1647 REMARK 3 T TENSOR REMARK 3 T11: 0.0717 T22: 0.1190 REMARK 3 T33: 0.1085 T12: 0.0072 REMARK 3 T13: -0.0091 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.2051 L22: 0.4028 REMARK 3 L33: 0.1908 L12: -0.0678 REMARK 3 L13: -0.0921 L23: 0.0835 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: 0.0236 S13: -0.2462 REMARK 3 S21: -0.0294 S22: -0.0019 S23: -0.2875 REMARK 3 S31: 0.0382 S32: 0.0474 S33: -0.0254 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 88:100) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0716 20.4051 -5.6771 REMARK 3 T TENSOR REMARK 3 T11: 0.0761 T22: 0.1296 REMARK 3 T33: 0.1544 T12: -0.0043 REMARK 3 T13: 0.0188 T23: -0.0592 REMARK 3 L TENSOR REMARK 3 L11: 0.2834 L22: 0.2315 REMARK 3 L33: 0.1486 L12: 0.0996 REMARK 3 L13: 0.0081 L23: 0.0596 REMARK 3 S TENSOR REMARK 3 S11: -0.0648 S12: 0.1185 S13: -0.1771 REMARK 3 S21: 0.0256 S22: 0.0166 S23: 0.0095 REMARK 3 S31: 0.0175 S32: 0.0182 S33: -0.0333 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 1:15) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2555 53.6030 -7.2034 REMARK 3 T TENSOR REMARK 3 T11: 0.0935 T22: 0.1343 REMARK 3 T33: 0.1012 T12: -0.0007 REMARK 3 T13: 0.0269 T23: 0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.2291 L22: 0.4405 REMARK 3 L33: 0.2333 L12: -0.0800 REMARK 3 L13: -0.0764 L23: 0.1093 REMARK 3 S TENSOR REMARK 3 S11: 0.0713 S12: -0.0008 S13: 0.0804 REMARK 3 S21: -0.1155 S22: -0.0383 S23: 0.0619 REMARK 3 S31: -0.0335 S32: -0.0753 S33: -0.0051 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 16:21) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6214 52.7343 -1.4731 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1399 REMARK 3 T33: 0.0873 T12: -0.0134 REMARK 3 T13: 0.0185 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 0.3378 L22: 0.3419 REMARK 3 L33: 0.1770 L12: 0.1284 REMARK 3 L13: -0.1101 L23: 0.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.0990 S12: 0.0445 S13: 0.0768 REMARK 3 S21: -0.0354 S22: -0.0395 S23: 0.0270 REMARK 3 S31: -0.0920 S32: -0.0152 S33: -0.0091 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 22:29) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5396 46.8822 6.9987 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.1294 REMARK 3 T33: 0.1977 T12: -0.0404 REMARK 3 T13: 0.0714 T23: -0.0406 REMARK 3 L TENSOR REMARK 3 L11: 0.4846 L22: 0.5388 REMARK 3 L33: 0.2421 L12: 0.0230 REMARK 3 L13: -0.1487 L23: 0.2300 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: 0.0485 S13: 0.1777 REMARK 3 S21: 0.1487 S22: -0.2477 S23: 0.3209 REMARK 3 S31: 0.1047 S32: -0.1878 S33: -0.0530 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 30:42) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0891 41.1953 -1.2541 REMARK 3 T TENSOR REMARK 3 T11: 0.0683 T22: 0.0967 REMARK 3 T33: 0.0749 T12: 0.0034 REMARK 3 T13: 0.0099 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.3119 L22: 0.3120 REMARK 3 L33: 0.0150 L12: -0.0374 REMARK 3 L13: -0.0081 L23: 0.0597 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: 0.0561 S13: -0.0542 REMARK 3 S21: 0.0114 S22: 0.0058 S23: 0.0855 REMARK 3 S31: 0.0738 S32: -0.0125 S33: -0.0135 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 43:52) REMARK 3 ORIGIN FOR THE GROUP (A): 16.3897 43.8289 4.3842 REMARK 3 T TENSOR REMARK 3 T11: 0.1053 T22: 0.1369 REMARK 3 T33: 0.0832 T12: 0.0135 REMARK 3 T13: -0.0021 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.2251 L22: 0.3414 REMARK 3 L33: 0.1616 L12: 0.0891 REMARK 3 L13: 0.0966 L23: 0.0934 REMARK 3 S TENSOR REMARK 3 S11: -0.0317 S12: -0.0561 S13: 0.0575 REMARK 3 S21: 0.1315 S22: 0.0293 S23: -0.0417 REMARK 3 S31: 0.0387 S32: 0.0943 S33: -0.0346 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 53:59) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1981 51.6337 5.8245 REMARK 3 T TENSOR REMARK 3 T11: 0.0975 T22: 0.1269 REMARK 3 T33: 0.0774 T12: 0.0068 REMARK 3 T13: 0.0122 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.2876 L22: 0.2252 REMARK 3 L33: 0.0550 L12: -0.0801 REMARK 3 L13: 0.0358 L23: 0.0922 REMARK 3 S TENSOR REMARK 3 S11: -0.1231 S12: -0.1186 S13: -0.0496 REMARK 3 S21: 0.0842 S22: 0.1548 S23: 0.0810 REMARK 3 S31: -0.0228 S32: 0.1372 S33: -0.0030 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 60:75) REMARK 3 ORIGIN FOR THE GROUP (A): 13.7811 51.2024 -3.4036 REMARK 3 T TENSOR REMARK 3 T11: 0.0914 T22: 0.1186 REMARK 3 T33: 0.0810 T12: 0.0100 REMARK 3 T13: 0.0199 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.2564 L22: 0.3174 REMARK 3 L33: 0.2142 L12: 0.0157 REMARK 3 L13: -0.1430 L23: 0.0952 REMARK 3 S TENSOR REMARK 3 S11: 0.0655 S12: 0.0338 S13: 0.0172 REMARK 3 S21: -0.0511 S22: -0.0159 S23: 0.0023 REMARK 3 S31: -0.1231 S32: 0.0397 S33: -0.0151 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 76:100) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3830 45.8586 -6.7310 REMARK 3 T TENSOR REMARK 3 T11: 0.0594 T22: 0.1056 REMARK 3 T33: 0.0716 T12: 0.0001 REMARK 3 T13: 0.0045 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.1654 L22: 0.5138 REMARK 3 L33: 0.1089 L12: -0.2948 REMARK 3 L13: -0.1452 L23: 0.2335 REMARK 3 S TENSOR REMARK 3 S11: 0.0103 S12: 0.1103 S13: -0.0453 REMARK 3 S21: -0.0583 S22: -0.0087 S23: 0.0487 REMARK 3 S31: 0.0246 S32: -0.0119 S33: -0.0085 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4H5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29635 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M AMMONIUM SULFATE, 0.1 M NA REMARK 280 -HEPES, AND 20% PEG 4000, PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.89467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 37.78933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.34200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 47.23667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 9.44733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 LEU A 2 REMARK 465 THR A 3 REMARK 465 ASN A 4 REMARK 465 MET B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR B 68 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 44 -130.42 50.56 REMARK 500 ALA A 48 -62.97 -122.21 REMARK 500 SER A 85 -135.53 -128.03 REMARK 500 ARG B 43 -130.75 50.08 REMARK 500 TYR B 83 52.83 -92.31 REMARK 500 REMARK 500 REMARK: NULL DBREF 4H5S A 1 100 UNP O95727 CRTAM_HUMAN 18 117 DBREF 4H5S B 1 100 UNP Q9BY67 CADM1_HUMAN 45 144 SEQADV 4H5S MET A 0 UNP O95727 EXPRESSION TAG SEQADV 4H5S MET B 0 UNP Q9BY67 EXPRESSION TAG SEQRES 1 A 101 MET SER LEU THR ASN HIS THR GLU THR ILE THR VAL GLU SEQRES 2 A 101 GLU GLY GLN THR LEU THR LEU LYS CYS VAL THR SER LEU SEQRES 3 A 101 ARG LYS ASN SER SER LEU GLN TRP LEU THR PRO SER GLY SEQRES 4 A 101 PHE THR ILE PHE LEU ASN GLU TYR PRO ALA LEU LYS ASN SEQRES 5 A 101 SER LYS TYR GLN LEU LEU HIS HIS SER ALA ASN GLN LEU SEQRES 6 A 101 SER ILE THR VAL PRO ASN VAL THR LEU GLN ASP GLU GLY SEQRES 7 A 101 VAL TYR LYS CYS LEU HIS TYR SER ASP SER VAL SER THR SEQRES 8 A 101 LYS GLU VAL LYS VAL ILE VAL LEU ALA THR SEQRES 1 B 101 MET GLN ASN LEU PHE THR LYS ASP VAL THR VAL ILE GLU SEQRES 2 B 101 GLY GLU VAL ALA THR ILE SER CYS GLN VAL ASN LYS SER SEQRES 3 B 101 ASP ASP SER VAL ILE GLN LEU LEU ASN PRO ASN ARG GLN SEQRES 4 B 101 THR ILE TYR PHE ARG ASP PHE ARG PRO LEU LYS ASP SER SEQRES 5 B 101 ARG PHE GLN LEU LEU ASN PHE SER SER SER GLU LEU LYS SEQRES 6 B 101 VAL SER LEU THR ASN VAL SER ILE SER ASP GLU GLY ARG SEQRES 7 B 101 TYR PHE CYS GLN LEU TYR THR ASP PRO PRO GLN GLU SER SEQRES 8 B 101 TYR THR THR ILE THR VAL LEU VAL PRO PRO FORMUL 3 HOH *374(H2 O) HELIX 1 1 THR A 72 GLU A 76 5 5 HELIX 2 2 SER B 71 GLU B 75 5 5 SHEET 1 A 5 GLU A 7 GLU A 12 0 SHEET 2 A 5 VAL A 88 LEU A 98 1 O LYS A 94 N ILE A 9 SHEET 3 A 5 GLY A 77 TYR A 84 -1 N TYR A 79 O VAL A 93 SHEET 4 A 5 SER A 30 LEU A 34 -1 N SER A 30 O TYR A 84 SHEET 5 A 5 THR A 40 LEU A 43 -1 O ILE A 41 N TRP A 33 SHEET 1 B 3 LEU A 17 VAL A 22 0 SHEET 2 B 3 GLN A 63 VAL A 68 -1 O VAL A 68 N LEU A 17 SHEET 3 B 3 GLN A 55 SER A 60 -1 N HIS A 58 O SER A 65 SHEET 1 C 4 LEU B 3 PHE B 4 0 SHEET 2 C 4 ALA B 16 VAL B 22 -1 O GLN B 21 N PHE B 4 SHEET 3 C 4 GLU B 62 LEU B 67 -1 O VAL B 65 N ILE B 18 SHEET 4 C 4 PHE B 53 SER B 59 -1 N ASN B 57 O LYS B 64 SHEET 1 D 5 VAL B 8 ILE B 11 0 SHEET 2 D 5 GLN B 88 LEU B 97 1 O THR B 95 N VAL B 8 SHEET 3 D 5 GLY B 76 LEU B 82 -1 N GLY B 76 O ILE B 94 SHEET 4 D 5 ILE B 30 LEU B 33 -1 N GLN B 31 O GLN B 81 SHEET 5 D 5 THR B 39 PHE B 42 -1 O ILE B 40 N LEU B 32 SSBOND 1 CYS A 21 CYS A 81 1555 1555 2.05 SSBOND 2 CYS B 20 CYS B 80 1555 1555 2.04 CISPEP 1 ASP B 85 PRO B 86 0 4.29 CRYST1 91.042 91.042 56.684 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010984 0.006342 0.000000 0.00000 SCALE2 0.000000 0.012683 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017642 0.00000