HEADER TRANSCRIPTION 19-SEP-12 4H62 TITLE STRUCTURE OF THE SACCHAROMYCES CEREVISIAE MEDIATOR SUBCOMPLEX TITLE 2 MED17C/MED11C/MED22C COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 11; COMPND 3 CHAIN: K; COMPND 4 FRAGMENT: C-TERMINAL REGION (UNP RESIDUES 84-115); COMPND 5 SYNONYM: MEDIATOR COMPLEX SUBUNIT 11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22; COMPND 9 CHAIN: V; COMPND 10 FRAGMENT: C-TERMINAL REGION (UNP RESIDUES 96-121); COMPND 11 SYNONYM: MEDIATOR COMPLEX SUBUNIT 22, SUPPRESSOR OF RNA POLYMERASE B COMPND 12 6; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17; COMPND 16 CHAIN: Q; COMPND 17 FRAGMENT: C-TERMINAL REGION (UNP RESIDUES 377-687); COMPND 18 SYNONYM: MEDIATOR COMPLEX SUBUNIT 17, SUPPRESSOR OF RNA POLYMERASE B COMPND 19 4; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: S288C; SOURCE 6 GENE: MED11, YM9718.11C, YMR112C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: B834(DE3)PRARE; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-28B; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 559292; SOURCE 16 STRAIN: S288C; SOURCE 17 GENE: MED22, SRB6, YBR1721, YBR253W; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 20 EXPRESSION_SYSTEM_STRAIN: B834(DE3)PRARE; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PET-28B; SOURCE 23 MOL_ID: 3; SOURCE 24 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 25 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 26 ORGANISM_TAXID: 559292; SOURCE 27 STRAIN: S288C; SOURCE 28 GENE: MED17, SRB4, YER022W; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 31 EXPRESSION_SYSTEM_STRAIN: B834(DE3)PRARE; SOURCE 32 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 33 EXPRESSION_SYSTEM_PLASMID: PET-21B KEYWDS TRANSCRIPTION, MEDIATOR COMPLEX, NUCLEUS EXPDTA X-RAY DIFFRACTION AUTHOR L.LARIVIERE,C.PLASCHKA,M.SEIZL,L.WENZECK,F.KURTH,P.CRAMER REVDAT 5 15-NOV-17 4H62 1 REMARK REVDAT 4 02-JAN-13 4H62 1 JRNL REVDAT 3 26-DEC-12 4H62 1 REMARK REVDAT 2 05-DEC-12 4H62 1 JRNL REVDAT 1 31-OCT-12 4H62 0 JRNL AUTH L.LARIVIERE,C.PLASCHKA,M.SEIZL,L.WENZECK,F.KURTH,P.CRAMER JRNL TITL STRUCTURE OF THE MEDIATOR HEAD MODULE. JRNL REF NATURE V. 492 448 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 23123849 JRNL DOI 10.1038/NATURE11670 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.230 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24328 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 621 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 65.3229 - 6.2389 1.00 2570 139 0.1934 0.2019 REMARK 3 2 6.2389 - 4.9526 1.00 2568 138 0.2062 0.2223 REMARK 3 3 4.9526 - 4.3267 1.00 2563 134 0.1531 0.1806 REMARK 3 4 4.3267 - 3.9311 1.00 2586 136 0.1894 0.2516 REMARK 3 5 3.9311 - 3.6494 1.00 2548 134 0.2057 0.2437 REMARK 3 6 3.6494 - 3.4342 1.00 2568 135 0.2423 0.2614 REMARK 3 7 3.4342 - 3.2623 1.00 2590 139 0.2868 0.3375 REMARK 3 8 3.2623 - 3.1203 1.00 2567 120 0.3308 0.4065 REMARK 3 9 3.1203 - 3.0001 1.00 2554 139 0.3586 0.3887 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2586 REMARK 3 ANGLE : 1.218 3477 REMARK 3 CHIRALITY : 0.083 416 REMARK 3 PLANARITY : 0.005 434 REMARK 3 DIHEDRAL : 17.439 1015 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN K AND RESID 93:111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2847 112.6547 95.3126 REMARK 3 T TENSOR REMARK 3 T11: 1.6481 T22: 2.1241 REMARK 3 T33: 1.1898 T12: -0.4746 REMARK 3 T13: -0.2534 T23: 0.5749 REMARK 3 L TENSOR REMARK 3 L11: 0.6819 L22: 5.1648 REMARK 3 L33: 0.7862 L12: -1.5348 REMARK 3 L13: -0.5663 L23: 2.0075 REMARK 3 S TENSOR REMARK 3 S11: -0.3644 S12: 0.0974 S13: 0.0147 REMARK 3 S21: 0.6421 S22: 1.1533 S23: -0.4667 REMARK 3 S31: 0.6065 S32: -1.8053 S33: 0.8523 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN V AND RESID 100:121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.6547 123.7085 98.3504 REMARK 3 T TENSOR REMARK 3 T11: 1.2972 T22: 1.1374 REMARK 3 T33: 0.7916 T12: -0.0677 REMARK 3 T13: 0.1302 T23: 0.0981 REMARK 3 L TENSOR REMARK 3 L11: 1.7562 L22: 9.1125 REMARK 3 L33: 6.0649 L12: 0.6517 REMARK 3 L13: 0.8957 L23: 7.3870 REMARK 3 S TENSOR REMARK 3 S11: 0.0963 S12: -1.2561 S13: -0.1580 REMARK 3 S21: 0.5946 S22: -1.2898 S23: 1.8344 REMARK 3 S31: -0.3833 S32: -1.3730 S33: -1.8771 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN Q AND ( RESID 383:541 OR RESID 594:611 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2822 112.2377 84.1853 REMARK 3 T TENSOR REMARK 3 T11: 1.0419 T22: 0.8553 REMARK 3 T33: 1.1401 T12: 0.0577 REMARK 3 T13: -0.1353 T23: 0.0464 REMARK 3 L TENSOR REMARK 3 L11: 5.9009 L22: 3.1549 REMARK 3 L33: 4.4650 L12: 2.5918 REMARK 3 L13: 0.3409 L23: -0.1353 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: 0.3658 S13: -0.7473 REMARK 3 S21: 0.0679 S22: -0.0852 S23: -0.1740 REMARK 3 S31: 0.2578 S32: -0.0592 S33: -2.7825 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN Q AND ( RESID 542:580 OR RESID 612:684 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.2513 142.6858 88.7657 REMARK 3 T TENSOR REMARK 3 T11: 1.2048 T22: 1.0177 REMARK 3 T33: 0.9169 T12: 0.0098 REMARK 3 T13: -0.0933 T23: 0.1279 REMARK 3 L TENSOR REMARK 3 L11: 2.1209 L22: 2.8806 REMARK 3 L33: 3.4520 L12: 0.3001 REMARK 3 L13: -0.6802 L23: -0.7202 REMARK 3 S TENSOR REMARK 3 S11: 0.2571 S12: -0.3632 S13: -0.4130 REMARK 3 S21: 0.3328 S22: -0.0750 S23: -0.5063 REMARK 3 S31: -0.4261 S32: 0.0157 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4H62 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000075064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97972 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24338 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 130.615 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 16.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.69220 REMARK 200 R SYM FOR SHELL (I) : 0.69220 REMARK 200 FOR SHELL : 0.560 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, 4 M AMMONIUM ACETATE, PH REMARK 280 6.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 130.61500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 75.41061 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 15.91333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 130.61500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 75.41061 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 15.91333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 130.61500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 75.41061 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 15.91333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 130.61500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 75.41061 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 15.91333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 130.61500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 75.41061 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 15.91333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 130.61500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 75.41061 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 15.91333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 150.82121 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 31.82667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 150.82121 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 31.82667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 150.82121 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 31.82667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 150.82121 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 31.82667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 150.82121 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 31.82667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 150.82121 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 31.82667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, V, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY K 80 REMARK 465 SER K 81 REMARK 465 HIS K 82 REMARK 465 MSE K 83 REMARK 465 ILE K 84 REMARK 465 ASN K 85 REMARK 465 VAL K 86 REMARK 465 ASN K 87 REMARK 465 LYS K 88 REMARK 465 LYS K 89 REMARK 465 ALA K 90 REMARK 465 LEU K 91 REMARK 465 GLY K 92 REMARK 465 SER K 112 REMARK 465 LYS K 113 REMARK 465 SER K 114 REMARK 465 LYS K 115 REMARK 465 GLY K 116 REMARK 465 ALA K 117 REMARK 465 GLY K 118 REMARK 465 SER K 119 REMARK 465 GLY V 91 REMARK 465 ALA V 92 REMARK 465 GLY V 93 REMARK 465 SER V 94 REMARK 465 GLY V 95 REMARK 465 VAL V 96 REMARK 465 THR V 97 REMARK 465 ARG V 98 REMARK 465 PHE V 99 REMARK 465 MSE Q 376 REMARK 465 LYS Q 377 REMARK 465 GLY Q 378 REMARK 465 THR Q 379 REMARK 465 ASP Q 380 REMARK 465 PHE Q 381 REMARK 465 VAL Q 382 REMARK 465 ASP Q 414 REMARK 465 SER Q 415 REMARK 465 GLU Q 416 REMARK 465 SER Q 417 REMARK 465 GLU Q 418 REMARK 465 GLU Q 419 REMARK 465 ALA Q 420 REMARK 465 GLU Q 421 REMARK 465 THR Q 422 REMARK 465 LYS Q 423 REMARK 465 SER Q 485 REMARK 465 ILE Q 486 REMARK 465 VAL Q 487 REMARK 465 ASN Q 488 REMARK 465 HIS Q 489 REMARK 465 GLU Q 490 REMARK 465 GLN Q 491 REMARK 465 ASP Q 492 REMARK 465 GLU Q 581 REMARK 465 ARG Q 582 REMARK 465 GLU Q 583 REMARK 465 GLN Q 584 REMARK 465 PRO Q 585 REMARK 465 GLN Q 586 REMARK 465 GLU Q 587 REMARK 465 ASN Q 588 REMARK 465 LYS Q 589 REMARK 465 ASN Q 590 REMARK 465 ILE Q 591 REMARK 465 ASP Q 592 REMARK 465 ASP Q 593 REMARK 465 LYS Q 685 REMARK 465 LYS Q 686 REMARK 465 VAL Q 687 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER Q 384 -72.18 -52.63 REMARK 500 GLU Q 400 -7.62 68.62 REMARK 500 GLU Q 460 -61.62 -102.09 REMARK 500 SER Q 525 -73.37 -77.72 REMARK 500 ASP Q 537 -73.14 -83.03 REMARK 500 ILE Q 541 -61.19 -132.83 REMARK 500 VAL Q 566 -64.20 -120.14 REMARK 500 TYR Q 640 -27.52 81.66 REMARK 500 ALA Q 679 -70.11 -57.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MES Q 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4H61 RELATED DB: PDB REMARK 900 RELATED ID: 4H63 RELATED DB: PDB DBREF 4H62 K 84 115 UNP Q99278 MED11_YEAST 84 115 DBREF 4H62 V 96 121 UNP P32570 MED22_YEAST 96 121 DBREF 4H62 Q 377 687 UNP P32569 MED17_YEAST 377 687 SEQADV 4H62 GLY K 80 UNP Q99278 EXPRESSION TAG SEQADV 4H62 SER K 81 UNP Q99278 EXPRESSION TAG SEQADV 4H62 HIS K 82 UNP Q99278 EXPRESSION TAG SEQADV 4H62 MSE K 83 UNP Q99278 EXPRESSION TAG SEQADV 4H62 GLY K 116 UNP Q99278 LINKER SEQADV 4H62 ALA K 117 UNP Q99278 LINKER SEQADV 4H62 GLY K 118 UNP Q99278 LINKER SEQADV 4H62 SER K 119 UNP Q99278 LINKER SEQADV 4H62 GLY V 91 UNP P32570 LINKER SEQADV 4H62 ALA V 92 UNP P32570 LINKER SEQADV 4H62 GLY V 93 UNP P32570 LINKER SEQADV 4H62 SER V 94 UNP P32570 LINKER SEQADV 4H62 GLY V 95 UNP P32570 LINKER SEQADV 4H62 MSE Q 376 UNP P32569 EXPRESSION TAG SEQRES 1 K 40 GLY SER HIS MSE ILE ASN VAL ASN LYS LYS ALA LEU GLY SEQRES 2 K 40 GLN ASP THR GLU LYS MSE GLU GLU GLN LEU ASP LEU LEU SEQRES 3 K 40 SER ALA ILE LEU ASP PRO SER LYS SER LYS GLY ALA GLY SEQRES 4 K 40 SER SEQRES 1 V 31 GLY ALA GLY SER GLY VAL THR ARG PHE ASP GLU LYS GLN SEQRES 2 V 31 ILE GLU GLU LEU LEU ASP ASN CYS ILE GLU THR PHE VAL SEQRES 3 V 31 ALA GLU LYS THR THR SEQRES 1 Q 312 MSE LYS GLY THR ASP PHE VAL HIS SER VAL LYS LYS PHE SEQRES 2 Q 312 LEU ARG VAL ARG ILE PHE THR LYS ILE GLU SER GLU ASP SEQRES 3 Q 312 ASP TYR ILE LEU SER GLY GLU SER VAL MSE ASP ARG ASP SEQRES 4 Q 312 SER GLU SER GLU GLU ALA GLU THR LYS ASP ILE ARG LYS SEQRES 5 Q 312 GLN ILE GLN LEU LEU LYS LYS ILE ILE PHE GLU LYS GLU SEQRES 6 Q 312 LEU MSE TYR GLN ILE LYS LYS GLU CYS ALA LEU LEU ILE SEQRES 7 Q 312 SER TYR GLY VAL SER ILE GLU ASN GLU ASN LYS VAL ILE SEQRES 8 Q 312 ILE GLU LEU PRO ASN GLU LYS PHE GLU ILE GLU LEU LEU SEQRES 9 Q 312 SER LEU ASP ASP ASP SER ILE VAL ASN HIS GLU GLN ASP SEQRES 10 Q 312 LEU PRO LYS ILE ASN ASP LYS ARG ALA ASN LEU MSE LEU SEQRES 11 Q 312 VAL MSE LEU ARG LEU LEU LEU VAL VAL ILE PHE LYS LYS SEQRES 12 Q 312 THR LEU ARG SER ARG ILE SER SER PRO HIS GLY LEU ILE SEQRES 13 Q 312 ASN LEU ASN VAL ASP ASP ASP ILE LEU ILE ILE ARG PRO SEQRES 14 Q 312 ILE LEU GLY LYS VAL ARG PHE ALA ASN TYR LYS LEU LEU SEQRES 15 Q 312 LEU LYS LYS ILE ILE LYS ASP TYR VAL LEU ASP ILE VAL SEQRES 16 Q 312 PRO GLY SER SER ILE THR GLU THR GLU VAL GLU ARG GLU SEQRES 17 Q 312 GLN PRO GLN GLU ASN LYS ASN ILE ASP ASP GLU ASN ILE SEQRES 18 Q 312 THR LYS LEU ASN LYS GLU ILE ARG ALA PHE ASP LYS LEU SEQRES 19 Q 312 LEU ASN ILE PRO ARG ARG GLU LEU LYS ILE ASN LEU PRO SEQRES 20 Q 312 LEU THR GLU HIS LYS SER PRO ASN LEU SER LEU MSE LEU SEQRES 21 Q 312 GLU SER PRO ASN TYR CYS ASN ALA LEU ILE HIS ILE LYS SEQRES 22 Q 312 PHE SER ALA GLY THR GLU ALA ASN ALA VAL SER PHE ASP SEQRES 23 Q 312 THR THR PHE SER ASP PHE LYS GLU VAL GLU ASP PHE LEU SEQRES 24 Q 312 HIS PHE ILE VAL ALA GLU TYR ILE GLN GLN LYS LYS VAL MODRES 4H62 MSE K 98 MET SELENOMETHIONINE MODRES 4H62 MSE Q 411 MET SELENOMETHIONINE MODRES 4H62 MSE Q 442 MET SELENOMETHIONINE MODRES 4H62 MSE Q 504 MET SELENOMETHIONINE MODRES 4H62 MSE Q 507 MET SELENOMETHIONINE MODRES 4H62 MSE Q 634 MET SELENOMETHIONINE HET MSE K 98 8 HET MSE Q 411 8 HET MSE Q 442 8 HET MSE Q 504 8 HET MSE Q 507 8 HET MSE Q 634 8 HET MES Q 701 12 HETNAM MSE SELENOMETHIONINE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 4 MES C6 H13 N O4 S HELIX 1 1 GLN K 93 ASP K 110 1 18 HELIX 2 2 GLU V 101 ALA V 117 1 17 HELIX 3 3 ILE Q 425 ALA Q 450 1 26 HELIX 4 4 LEU Q 451 TYR Q 455 5 5 HELIX 5 5 ASN Q 497 SER Q 525 1 29 HELIX 6 6 ASN Q 534 ILE Q 539 1 6 HELIX 7 7 ILE Q 541 VAL Q 566 1 26 HELIX 8 8 ILE Q 596 ALA Q 605 1 10 HELIX 9 9 PHE Q 606 ASN Q 611 1 6 HELIX 10 10 ASP Q 666 TYR Q 681 1 16 SHEET 1 A 5 TYR Q 403 GLU Q 408 0 SHEET 2 A 5 PHE Q 388 LYS Q 396 -1 N THR Q 395 O ILE Q 404 SHEET 3 A 5 GLU Q 472 LEU Q 479 -1 O LYS Q 473 N PHE Q 394 SHEET 4 A 5 LYS Q 464 GLU Q 468 -1 N ILE Q 467 O PHE Q 474 SHEET 5 A 5 VAL Q 457 ASN Q 461 -1 N SER Q 458 O ILE Q 466 SHEET 1 B 5 SER Q 574 GLU Q 579 0 SHEET 2 B 5 ARG Q 614 ASN Q 620 -1 O ASN Q 620 N SER Q 574 SHEET 3 B 5 ASN Q 630 GLU Q 636 -1 O LEU Q 633 N LEU Q 617 SHEET 4 B 5 LEU Q 644 SER Q 650 -1 O LEU Q 644 N GLU Q 636 SHEET 5 B 5 PHE Q 660 PHE Q 664 -1 O PHE Q 664 N ILE Q 645 LINK C LYS K 97 N MSE K 98 1555 1555 1.33 LINK C MSE K 98 N GLU K 99 1555 1555 1.33 LINK C VAL Q 410 N MSE Q 411 1555 1555 1.33 LINK C MSE Q 411 N ASP Q 412 1555 1555 1.33 LINK C LEU Q 441 N MSE Q 442 1555 1555 1.33 LINK C MSE Q 442 N TYR Q 443 1555 1555 1.33 LINK C LEU Q 503 N MSE Q 504 1555 1555 1.33 LINK C MSE Q 504 N LEU Q 505 1555 1555 1.33 LINK C VAL Q 506 N MSE Q 507 1555 1555 1.33 LINK C MSE Q 507 N LEU Q 508 1555 1555 1.33 LINK C LEU Q 633 N MSE Q 634 1555 1555 1.32 LINK C MSE Q 634 N LEU Q 635 1555 1555 1.33 SITE 1 AC1 8 LEU Q 469 PRO Q 470 ASN Q 471 VAL Q 549 SITE 2 AC1 8 ALA Q 552 ASN Q 553 VAL V 116 THR V 120 CRYST1 261.230 261.230 47.740 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003828 0.002210 0.000000 0.00000 SCALE2 0.000000 0.004420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020947 0.00000