HEADER HYDROLASE 04-OCT-12 4HET TITLE CRYSTAL STRUCTURE OF A PUTATIVE GLYCOSIDE HYDROLASE (BT3745) FROM TITLE 2 BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.10 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL GLYCOSIDE HYDROLASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 16-374; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 STRAIN: ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482; SOURCE 5 GENE: BT_3745, NP_812656.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS GALACTOSE-BINDING DOMAIN-LIKE, XYLANASE, PF13201 FAMILY, STRUCTURAL KEYWDS 2 GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN KEYWDS 3 STRUCTURE INITIATIVE, PSI-BIOLOGY, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4HET 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4HET 1 REMARK REVDAT 2 24-DEC-14 4HET 1 TITLE REVDAT 1 24-OCT-12 4HET 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL GLYCOSIDE HYDROLASE JRNL TITL 2 (BT3745) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.10 JRNL TITL 3 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.52 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 69354 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3508 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4708 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5307 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 362 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.32000 REMARK 3 B22 (A**2) : 1.32000 REMARK 3 B33 (A**2) : -1.99000 REMARK 3 B12 (A**2) : 0.66000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.140 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.131 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.330 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5516 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3684 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7489 ; 1.611 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9056 ; 0.998 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 714 ; 3.858 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 253 ;33.054 ;25.613 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 935 ;11.415 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;14.847 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 832 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6240 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1096 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 374 REMARK 3 ORIGIN FOR THE GROUP (A): 61.9397 -83.4650 57.8994 REMARK 3 T TENSOR REMARK 3 T11: 0.0389 T22: 0.1524 REMARK 3 T33: 0.1293 T12: -0.0248 REMARK 3 T13: 0.0297 T23: 0.0447 REMARK 3 L TENSOR REMARK 3 L11: 1.6175 L22: 1.1329 REMARK 3 L33: 3.1195 L12: -0.0346 REMARK 3 L13: 0.3476 L23: 0.6454 REMARK 3 S TENSOR REMARK 3 S11: 0.0510 S12: -0.1182 S13: -0.0652 REMARK 3 S21: 0.1523 S22: 0.0641 S23: 0.0890 REMARK 3 S31: 0.1179 S32: 0.1401 S33: -0.1151 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 30 B 374 REMARK 3 ORIGIN FOR THE GROUP (A): 95.9804 -77.3560 46.3613 REMARK 3 T TENSOR REMARK 3 T11: 0.0863 T22: 0.2179 REMARK 3 T33: 0.1443 T12: -0.0352 REMARK 3 T13: 0.0321 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 3.2122 L22: 2.7347 REMARK 3 L33: 2.1364 L12: 0.1792 REMARK 3 L13: 0.6018 L23: 0.0668 REMARK 3 S TENSOR REMARK 3 S11: -0.1640 S12: 0.2766 S13: 0.1425 REMARK 3 S21: -0.4311 S22: 0.0848 S23: -0.0904 REMARK 3 S31: -0.1488 S32: -0.0165 S33: 0.0792 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3.ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5.EXPERIMENTAL PHASES (MAD) WERE USED AS RESTRAINTS DURING REMARK 3 STRUCTURE REFINEMENT. 6.1,2-ETHANEDIOL (EDO) FROM THE REMARK 3 CRYOPROTECTANT SOLUTION WERE INCLUDED IN THE SOLVENT STRUCTURE. REMARK 3 7.RAMACHANDRAN OUTLIERS AT RESIDUES A106, A95 AND B95 ARE IN REMARK 3 REGIONS THAT DO NOT HAVE WELL-DEFINED ELECTRON DENSITY. REMARK 4 REMARK 4 4HET COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075376. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97923 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 69380 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 29.522 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09700 REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 0.83800 REMARK 200 R SYM FOR SHELL (I) : 0.83800 REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20M MAGNESIUM NITRATE, 20.00% REMARK 280 POLYETHYLENE GLYCOL 3350, NANODROP, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.25067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 42.50133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.87600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 53.12667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 10.62533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ALA A 16 REMARK 465 THR A 17 REMARK 465 SER A 18 REMARK 465 CYS A 19 REMARK 465 ILE A 20 REMARK 465 GLN A 21 REMARK 465 ASP A 22 REMARK 465 GLU A 23 REMARK 465 ALA A 24 REMARK 465 LEU A 25 REMARK 465 ASN A 26 REMARK 465 GLY B 0 REMARK 465 ALA B 16 REMARK 465 THR B 17 REMARK 465 SER B 18 REMARK 465 CYS B 19 REMARK 465 ILE B 20 REMARK 465 GLN B 21 REMARK 465 ASP B 22 REMARK 465 GLU B 23 REMARK 465 ALA B 24 REMARK 465 LEU B 25 REMARK 465 ASN B 26 REMARK 465 SER B 27 REMARK 465 GLU B 28 REMARK 465 ALA B 29 REMARK 465 GLU B 106 REMARK 465 ASP B 107 REMARK 465 GLY B 108 REMARK 465 GLN B 109 REMARK 465 TRP B 110 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 27 OG REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 GLU A 72 CG CD OE1 OE2 REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 GLN A 150 CG CD OE1 NE2 REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 ASP A 374 CG OD1 OD2 REMARK 470 GLU B 72 CG CD OE1 OE2 REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 GLU B 95 CG CD OE1 OE2 REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 LYS B 252 CE NZ REMARK 470 GLN B 314 CG CD OE1 NE2 REMARK 470 ASP B 374 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 29 102.05 -164.30 REMARK 500 GLU A 95 -70.75 -21.33 REMARK 500 GLU A 106 -38.80 113.91 REMARK 500 LYS A 111 61.57 -117.95 REMARK 500 ASN A 184 35.64 -88.70 REMARK 500 GLU B 95 -67.00 -22.43 REMARK 500 THR B 104 -162.92 -112.10 REMARK 500 ASN B 184 34.03 -85.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 400 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-386422 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 16-374) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4HET A 16 374 UNP Q8A1C1 Q8A1C1_BACTN 16 374 DBREF 4HET B 16 374 UNP Q8A1C1 Q8A1C1_BACTN 16 374 SEQADV 4HET GLY A 0 UNP Q8A1C1 EXPRESSION TAG SEQADV 4HET GLY B 0 UNP Q8A1C1 EXPRESSION TAG SEQRES 1 A 360 GLY ALA THR SER CYS ILE GLN ASP GLU ALA LEU ASN SER SEQRES 2 A 360 GLU ALA ALA ILE ASP ALA CYS THR GLY ASP ASP VAL GLN SEQRES 3 A 360 LEU ALA ASN ILE ASN ALA ASP SER LYS LEU ILE ASN VAL SEQRES 4 A 360 TYR VAL ASN LYS GLY ALA ASP LEU SER LYS GLN LYS LEU SEQRES 5 A 360 GLU PHE VAL ILE PRO GLU GLY ALA THR ILE LYS ILE ASN SEQRES 6 A 360 ASP GLN VAL ALA GLY ASP THR GLU ALA THR TYR ASP PHE SEQRES 7 A 360 SER GLU GLU THR HIS SER ARG LYS PHE THR VAL THR SER SEQRES 8 A 360 GLU ASP GLY GLN TRP LYS PRO VAL TYR THR VAL LYS VAL SEQRES 9 A 360 VAL LEU ALA GLU LEU PRO THR SER PHE ASN PHE GLU GLU SEQRES 10 A 360 LEU LEU PRO SER ASN ASP TYR ASP ILE PHE TYR GLU PHE SEQRES 11 A 360 GLN PRO GLY THR SER GLN GLU ILE SER LYS VAL LEU GLN SEQRES 12 A 360 TRP SER SER GLY ASN PRO GLY PHE LYS LEU THR GLY MSE SEQRES 13 A 360 ALA ASN SER LYS THR ASP TYR PRO THR VAL GLN VAL ALA SEQRES 14 A 360 ASN GLY PHE ARG GLY LYS GLY VAL LYS LEU GLU THR ARG SEQRES 15 A 360 ASP THR GLY SER PHE GLY ALA MSE VAL LYS MSE TYR ILE SEQRES 16 A 360 ALA ALA GLY ASN LEU PHE ILE GLY THR PHE GLU VAL GLY SEQRES 17 A 360 ASN ALA LEU THR ASP PRO ARG LYS ALA THR ASN PHE GLY SEQRES 18 A 360 PHE GLN PHE TYR LYS ARG PRO LYS THR LEU LYS GLY HIS SEQRES 19 A 360 TYR LYS PHE LYS ALA GLY ASP VAL TYR SER VAL GLU GLY SEQRES 20 A 360 LYS PRO GLN GLU GLY VAL ARG ASP LYS CYS ASP ILE TYR SEQRES 21 A 360 ALA VAL MSE TYR GLU ALA GLU ASN ASN SER VAL MSE LEU SEQRES 22 A 360 ASN GLY ASP ASP VAL PHE THR SER ASP LYS LEU VAL SER SEQRES 23 A 360 LEU ALA ARG ILE LYS PRO GLU ASP VAL VAL GLU SER ASP SEQRES 24 A 360 GLN TRP THR ASP PHE GLU ILE PRO PHE GLU PRO VAL LYS SEQRES 25 A 360 GLY ARG VAL ILE ASP ASP THR LYS LEU LYS ASN GLY LYS SEQRES 26 A 360 TYR LYS LEU GLY ILE VAL LEU SER SER SER VAL ASP GLY SEQRES 27 A 360 ALA TYR PHE LYS GLY ALA VAL GLY SER THR LEU TYR VAL SEQRES 28 A 360 ASP GLU VAL GLU LEU ILE CYS GLU ASP SEQRES 1 B 360 GLY ALA THR SER CYS ILE GLN ASP GLU ALA LEU ASN SER SEQRES 2 B 360 GLU ALA ALA ILE ASP ALA CYS THR GLY ASP ASP VAL GLN SEQRES 3 B 360 LEU ALA ASN ILE ASN ALA ASP SER LYS LEU ILE ASN VAL SEQRES 4 B 360 TYR VAL ASN LYS GLY ALA ASP LEU SER LYS GLN LYS LEU SEQRES 5 B 360 GLU PHE VAL ILE PRO GLU GLY ALA THR ILE LYS ILE ASN SEQRES 6 B 360 ASP GLN VAL ALA GLY ASP THR GLU ALA THR TYR ASP PHE SEQRES 7 B 360 SER GLU GLU THR HIS SER ARG LYS PHE THR VAL THR SER SEQRES 8 B 360 GLU ASP GLY GLN TRP LYS PRO VAL TYR THR VAL LYS VAL SEQRES 9 B 360 VAL LEU ALA GLU LEU PRO THR SER PHE ASN PHE GLU GLU SEQRES 10 B 360 LEU LEU PRO SER ASN ASP TYR ASP ILE PHE TYR GLU PHE SEQRES 11 B 360 GLN PRO GLY THR SER GLN GLU ILE SER LYS VAL LEU GLN SEQRES 12 B 360 TRP SER SER GLY ASN PRO GLY PHE LYS LEU THR GLY MSE SEQRES 13 B 360 ALA ASN SER LYS THR ASP TYR PRO THR VAL GLN VAL ALA SEQRES 14 B 360 ASN GLY PHE ARG GLY LYS GLY VAL LYS LEU GLU THR ARG SEQRES 15 B 360 ASP THR GLY SER PHE GLY ALA MSE VAL LYS MSE TYR ILE SEQRES 16 B 360 ALA ALA GLY ASN LEU PHE ILE GLY THR PHE GLU VAL GLY SEQRES 17 B 360 ASN ALA LEU THR ASP PRO ARG LYS ALA THR ASN PHE GLY SEQRES 18 B 360 PHE GLN PHE TYR LYS ARG PRO LYS THR LEU LYS GLY HIS SEQRES 19 B 360 TYR LYS PHE LYS ALA GLY ASP VAL TYR SER VAL GLU GLY SEQRES 20 B 360 LYS PRO GLN GLU GLY VAL ARG ASP LYS CYS ASP ILE TYR SEQRES 21 B 360 ALA VAL MSE TYR GLU ALA GLU ASN ASN SER VAL MSE LEU SEQRES 22 B 360 ASN GLY ASP ASP VAL PHE THR SER ASP LYS LEU VAL SER SEQRES 23 B 360 LEU ALA ARG ILE LYS PRO GLU ASP VAL VAL GLU SER ASP SEQRES 24 B 360 GLN TRP THR ASP PHE GLU ILE PRO PHE GLU PRO VAL LYS SEQRES 25 B 360 GLY ARG VAL ILE ASP ASP THR LYS LEU LYS ASN GLY LYS SEQRES 26 B 360 TYR LYS LEU GLY ILE VAL LEU SER SER SER VAL ASP GLY SEQRES 27 B 360 ALA TYR PHE LYS GLY ALA VAL GLY SER THR LEU TYR VAL SEQRES 28 B 360 ASP GLU VAL GLU LEU ILE CYS GLU ASP MODRES 4HET MSE A 170 MET SELENOMETHIONINE MODRES 4HET MSE A 204 MET SELENOMETHIONINE MODRES 4HET MSE A 207 MET SELENOMETHIONINE MODRES 4HET MSE A 277 MET SELENOMETHIONINE MODRES 4HET MSE A 286 MET SELENOMETHIONINE MODRES 4HET MSE B 170 MET SELENOMETHIONINE MODRES 4HET MSE B 204 MET SELENOMETHIONINE MODRES 4HET MSE B 207 MET SELENOMETHIONINE MODRES 4HET MSE B 277 MET SELENOMETHIONINE MODRES 4HET MSE B 286 MET SELENOMETHIONINE HET MSE A 170 8 HET MSE A 204 13 HET MSE A 207 8 HET MSE A 277 8 HET MSE A 286 8 HET MSE B 170 8 HET MSE B 204 13 HET MSE B 207 8 HET MSE B 277 8 HET MSE B 286 8 HET EDO A 401 4 HET EDO B 400 4 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *362(H2 O) HELIX 1 1 GLY A 161 LEU A 167 1 7 HELIX 2 2 SER A 173 TYR A 177 5 5 HELIX 3 3 GLY A 185 ARG A 187 5 3 HELIX 4 4 THR A 198 VAL A 205 1 8 HELIX 5 5 VAL A 221 ALA A 224 5 4 HELIX 6 6 ASP A 227 ALA A 231 1 5 HELIX 7 7 LYS A 305 VAL A 309 5 5 HELIX 8 8 ASP A 331 ASN A 337 1 7 HELIX 9 9 ASP A 351 TYR A 354 5 4 HELIX 10 10 GLY B 161 LEU B 167 1 7 HELIX 11 11 SER B 173 TYR B 177 5 5 HELIX 12 12 GLY B 185 ARG B 187 5 3 HELIX 13 13 THR B 198 VAL B 205 1 8 HELIX 14 14 VAL B 221 ALA B 224 5 4 HELIX 15 15 ASP B 227 ALA B 231 1 5 HELIX 16 16 LYS B 305 VAL B 309 5 5 HELIX 17 17 ASP B 331 ASN B 337 1 7 HELIX 18 18 ASP B 351 TYR B 354 5 4 SHEET 1 A 2 ALA A 33 GLY A 36 0 SHEET 2 A 2 LEU A 66 VAL A 69 -1 O GLU A 67 N THR A 35 SHEET 1 B 5 VAL A 39 ASN A 45 0 SHEET 2 B 5 LEU A 50 ASN A 56 -1 O TYR A 54 N GLN A 40 SHEET 3 B 5 VAL A 113 GLU A 122 1 O LYS A 117 N VAL A 53 SHEET 4 B 5 SER A 98 THR A 104 -1 N ARG A 99 O VAL A 116 SHEET 5 B 5 THR A 75 ILE A 78 -1 N LYS A 77 O THR A 102 SHEET 1 C 6 VAL A 39 ASN A 45 0 SHEET 2 C 6 LEU A 50 ASN A 56 -1 O TYR A 54 N GLN A 40 SHEET 3 C 6 VAL A 113 GLU A 122 1 O LYS A 117 N VAL A 53 SHEET 4 C 6 SER A 153 GLN A 157 1 O VAL A 155 N GLU A 122 SHEET 5 C 6 PHE A 141 GLN A 145 -1 N GLN A 145 O LYS A 154 SHEET 6 C 6 GLU A 131 LEU A 132 -1 N GLU A 131 O TYR A 142 SHEET 1 D 4 SER A 126 PHE A 127 0 SHEET 2 D 4 THR A 362 CYS A 372 -1 O VAL A 368 N PHE A 127 SHEET 3 D 4 LYS A 189 GLU A 194 -1 N LEU A 193 O LEU A 363 SHEET 4 D 4 THR A 179 ALA A 183 -1 N VAL A 180 O LYS A 192 SHEET 1 E 4 SER A 126 PHE A 127 0 SHEET 2 E 4 THR A 362 CYS A 372 -1 O VAL A 368 N PHE A 127 SHEET 3 E 4 PRO A 242 LYS A 252 -1 N LYS A 243 O ILE A 371 SHEET 4 E 4 THR A 316 PRO A 321 -1 O ILE A 320 N LEU A 245 SHEET 1 F 2 ARG A 196 ASP A 197 0 SHEET 2 F 2 ILE A 209 ALA A 210 -1 O ALA A 210 N ARG A 196 SHEET 1 G 3 ASN A 213 PHE A 215 0 SHEET 2 G 3 TYR A 340 SER A 347 -1 O LEU A 346 N LEU A 214 SHEET 3 G 3 PHE A 236 GLN A 237 -1 N PHE A 236 O LEU A 342 SHEET 1 H 5 ASN A 213 PHE A 215 0 SHEET 2 H 5 TYR A 340 SER A 347 -1 O LEU A 346 N LEU A 214 SHEET 3 H 5 ASP A 272 GLU A 279 -1 N TYR A 274 O VAL A 345 SHEET 4 H 5 LEU A 298 ARG A 303 -1 O ALA A 302 N ALA A 275 SHEET 5 H 5 GLU A 323 PRO A 324 -1 O GLU A 323 N LEU A 301 SHEET 1 I 3 GLY A 217 PHE A 219 0 SHEET 2 I 3 THR A 232 PHE A 234 -1 O ASN A 233 N THR A 218 SHEET 3 I 3 LEU A 287 ASN A 288 -1 O LEU A 287 N PHE A 234 SHEET 1 J 3 LYS A 262 PRO A 263 0 SHEET 2 J 3 TYR A 257 VAL A 259 -1 N VAL A 259 O LYS A 262 SHEET 3 J 3 LYS A 356 ALA A 358 -1 O GLY A 357 N SER A 258 SHEET 1 K 2 ALA B 33 GLY B 36 0 SHEET 2 K 2 LEU B 66 VAL B 69 -1 O GLU B 67 N THR B 35 SHEET 1 L 5 VAL B 39 ASN B 45 0 SHEET 2 L 5 LEU B 50 ASN B 56 -1 O TYR B 54 N LEU B 41 SHEET 3 L 5 VAL B 113 GLU B 122 1 O VAL B 119 N VAL B 53 SHEET 4 L 5 SER B 98 THR B 104 -1 N ARG B 99 O VAL B 116 SHEET 5 L 5 THR B 75 ILE B 78 -1 N LYS B 77 O THR B 102 SHEET 1 M 6 VAL B 39 ASN B 45 0 SHEET 2 M 6 LEU B 50 ASN B 56 -1 O TYR B 54 N LEU B 41 SHEET 3 M 6 VAL B 113 GLU B 122 1 O VAL B 119 N VAL B 53 SHEET 4 M 6 SER B 153 GLN B 157 1 O VAL B 155 N GLU B 122 SHEET 5 M 6 PHE B 141 GLN B 145 -1 N GLN B 145 O LYS B 154 SHEET 6 M 6 GLU B 131 LEU B 132 -1 N GLU B 131 O TYR B 142 SHEET 1 N 4 SER B 126 PHE B 127 0 SHEET 2 N 4 THR B 362 CYS B 372 -1 O VAL B 368 N PHE B 127 SHEET 3 N 4 LYS B 189 GLU B 194 -1 N LEU B 193 O LEU B 363 SHEET 4 N 4 THR B 179 ALA B 183 -1 N VAL B 180 O LYS B 192 SHEET 1 O 4 SER B 126 PHE B 127 0 SHEET 2 O 4 THR B 362 CYS B 372 -1 O VAL B 368 N PHE B 127 SHEET 3 O 4 PRO B 242 LYS B 252 -1 N THR B 244 O ILE B 371 SHEET 4 O 4 THR B 316 PRO B 321 -1 O ILE B 320 N LEU B 245 SHEET 1 P 2 ARG B 196 ASP B 197 0 SHEET 2 P 2 ILE B 209 ALA B 210 -1 O ALA B 210 N ARG B 196 SHEET 1 Q 3 ASN B 213 PHE B 215 0 SHEET 2 Q 3 TYR B 340 SER B 347 -1 O LEU B 346 N LEU B 214 SHEET 3 Q 3 PHE B 236 GLN B 237 -1 N PHE B 236 O LEU B 342 SHEET 1 R 5 ASN B 213 PHE B 215 0 SHEET 2 R 5 TYR B 340 SER B 347 -1 O LEU B 346 N LEU B 214 SHEET 3 R 5 ASP B 272 GLU B 279 -1 N TYR B 274 O VAL B 345 SHEET 4 R 5 LEU B 298 ARG B 303 -1 O ALA B 302 N ALA B 275 SHEET 5 R 5 GLU B 323 PRO B 324 -1 O GLU B 323 N LEU B 301 SHEET 1 S 3 GLY B 217 PHE B 219 0 SHEET 2 S 3 THR B 232 PHE B 234 -1 O ASN B 233 N THR B 218 SHEET 3 S 3 LEU B 287 ASN B 288 -1 O LEU B 287 N PHE B 234 SHEET 1 T 3 LYS B 262 PRO B 263 0 SHEET 2 T 3 TYR B 257 VAL B 259 -1 N VAL B 259 O LYS B 262 SHEET 3 T 3 LYS B 356 ALA B 358 -1 O GLY B 357 N SER B 258 LINK C GLY A 169 N MSE A 170 1555 1555 1.33 LINK C MSE A 170 N ALA A 171 1555 1555 1.32 LINK C ALA A 203 N MSE A 204 1555 1555 1.34 LINK C MSE A 204 N VAL A 205 1555 1555 1.34 LINK C LYS A 206 N MSE A 207 1555 1555 1.34 LINK C MSE A 207 N TYR A 208 1555 1555 1.32 LINK C VAL A 276 N MSE A 277 1555 1555 1.32 LINK C MSE A 277 N TYR A 278 1555 1555 1.33 LINK C VAL A 285 N MSE A 286 1555 1555 1.33 LINK C MSE A 286 N LEU A 287 1555 1555 1.33 LINK C GLY B 169 N MSE B 170 1555 1555 1.34 LINK C MSE B 170 N ALA B 171 1555 1555 1.33 LINK C ALA B 203 N MSE B 204 1555 1555 1.34 LINK C MSE B 204 N VAL B 205 1555 1555 1.34 LINK C LYS B 206 N MSE B 207 1555 1555 1.34 LINK C MSE B 207 N TYR B 208 1555 1555 1.32 LINK C VAL B 276 N MSE B 277 1555 1555 1.32 LINK C MSE B 277 N TYR B 278 1555 1555 1.33 LINK C VAL B 285 N MSE B 286 1555 1555 1.33 LINK C MSE B 286 N LEU B 287 1555 1555 1.33 SITE 1 AC1 3 ARG A 187 PHE B 144 HOH B 535 SITE 1 AC2 2 ARG B 187 HOH B 601 CRYST1 180.385 180.385 63.752 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005544 0.003201 0.000000 0.00000 SCALE2 0.000000 0.006401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015686 0.00000