HEADER HYDROLASE 08-OCT-12 4HGN TITLE CRYSTAL STRUCTURE OF 2-KETO-3-DEOXYOCTULOSONATE 8-PHOSPHATE TITLE 2 PHOSPHOHYDROLASE FROM BACTEROIDES THETAIOTAOMICRON COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-KETO-3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE COMPND 3 PHOSPHOHYDROLASE; COMPND 4 CHAIN: A, B, C, D; COMPND 5 EC: 3.1.3.45; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 STRAIN: VPI-5482; SOURCE 5 GENE: BT_1677; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15B KEYWDS ROSSMANN FOLD, PHOSPHOHYDROYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.D.DAUGHTRY,K.N.ALLEN REVDAT 5 20-SEP-23 4HGN 1 REMARK REVDAT 4 10-FEB-21 4HGN 1 JRNL REMARK SEQADV LINK REVDAT 3 12-NOV-14 4HGN 1 KEYWDS REVDAT 2 28-AUG-13 4HGN 1 JRNL REVDAT 1 21-AUG-13 4HGN 0 JRNL AUTH K.D.DAUGHTRY,H.HUANG,V.MALASHKEVICH,Y.PATSKOVSKY,W.LIU, JRNL AUTH 2 U.RAMAGOPAL,J.M.SAUDER,S.K.BURLEY,S.C.ALMO, JRNL AUTH 3 D.DUNAWAY-MARIANO,K.N.ALLEN JRNL TITL STRUCTURAL BASIS FOR THE DIVERGENCE OF SUBSTRATE SPECIFICITY JRNL TITL 2 AND BIOLOGICAL FUNCTION WITHIN HAD PHOSPHATASES IN JRNL TITL 3 LIPOPOLYSACCHARIDE AND SIALIC ACID BIOSYNTHESIS. JRNL REF BIOCHEMISTRY V. 52 5372 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 23848398 JRNL DOI 10.1021/BI400659K REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.2 REMARK 3 NUMBER OF REFLECTIONS : 45439 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.6400 - 4.5331 1.00 3530 187 0.1659 0.1899 REMARK 3 2 4.5331 - 3.5991 1.00 3382 170 0.1451 0.1925 REMARK 3 3 3.5991 - 3.1444 0.99 3265 167 0.1756 0.2106 REMARK 3 4 3.1444 - 2.8570 0.97 3221 161 0.1931 0.2242 REMARK 3 5 2.8570 - 2.6523 0.94 3107 152 0.1944 0.2362 REMARK 3 6 2.6523 - 2.4960 0.92 2997 162 0.1949 0.2187 REMARK 3 7 2.4960 - 2.3710 0.89 2897 151 0.1785 0.2058 REMARK 3 8 2.3710 - 2.2678 0.83 2709 140 0.1757 0.2532 REMARK 3 9 2.2678 - 2.1805 0.80 2558 166 0.1725 0.2351 REMARK 3 10 2.1805 - 2.1053 0.76 2447 148 0.1724 0.2553 REMARK 3 11 2.1053 - 2.0395 0.73 2368 126 0.1812 0.2318 REMARK 3 12 2.0395 - 1.9812 0.71 2239 133 0.1946 0.2291 REMARK 3 13 1.9812 - 1.9290 0.66 2160 118 0.1995 0.2798 REMARK 3 14 1.9290 - 1.8819 0.67 2160 110 0.2050 0.2512 REMARK 3 15 1.8819 - 1.8392 0.64 2089 103 0.2118 0.2753 REMARK 3 16 1.8392 - 1.8000 0.63 2010 106 0.1981 0.2545 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5184 REMARK 3 ANGLE : 1.094 7024 REMARK 3 CHIRALITY : 0.077 779 REMARK 3 PLANARITY : 0.005 895 REMARK 3 DIHEDRAL : 12.949 1932 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HGN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075442. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50327 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 36.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 19.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.43200 REMARK 200 FOR SHELL : 2.790 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3E8M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES, 30% POLYETHYLENE GLYCOL REMARK 280 MME 550, 40 MM MAGNESIUM CHLORIDE. CRYSTAL DRAGGED THROUGH REMARK 280 PARATONE PRIOR TO FLASH COOLING, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.76100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.03350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.59900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.03350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.76100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.59900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 167 REMARK 465 GLU A 168 REMARK 465 ASP A 169 REMARK 465 ALA A 170 REMARK 465 PHE A 171 REMARK 465 GLY A 172 REMARK 465 TRP A 173 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 MET B 166 REMARK 465 ALA B 167 REMARK 465 GLU B 168 REMARK 465 ASP B 169 REMARK 465 ALA B 170 REMARK 465 PHE B 171 REMARK 465 GLY B 172 REMARK 465 TRP B 173 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 ALA C 167 REMARK 465 GLU C 168 REMARK 465 ASP C 169 REMARK 465 ALA C 170 REMARK 465 PHE C 171 REMARK 465 GLY C 172 REMARK 465 TRP C 173 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 ALA D 167 REMARK 465 GLU D 168 REMARK 465 ASP D 169 REMARK 465 ALA D 170 REMARK 465 PHE D 171 REMARK 465 GLY D 172 REMARK 465 TRP D 173 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 322 O HOH D 341 2.03 REMARK 500 O HOH B 346 O HOH B 348 2.09 REMARK 500 O HOH B 363 O HOH B 364 2.10 REMARK 500 O HOH D 317 O HOH D 345 2.13 REMARK 500 O HOH A 361 O HOH A 381 2.14 REMARK 500 OE2 GLU C 120 O HOH C 340 2.17 REMARK 500 O HOH B 327 O HOH B 335 2.18 REMARK 500 OD1 ASN D 93 O HOH D 361 2.18 REMARK 500 O HOH A 356 O HOH A 357 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 18 -63.83 -92.98 REMARK 500 VAL A 21 -65.26 -124.82 REMARK 500 TRP A 165 -63.69 -99.52 REMARK 500 VAL B 18 -65.72 -91.44 REMARK 500 VAL B 21 -68.24 -125.89 REMARK 500 VAL C 18 -70.42 -91.73 REMARK 500 VAL C 21 -67.99 -124.76 REMARK 500 VAL D 18 -70.39 -96.02 REMARK 500 VAL D 21 -71.34 -129.79 REMARK 500 ARG D 64 40.64 -105.40 REMARK 500 THR D 65 75.76 -39.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 17 OD2 REMARK 620 2 ASP A 19 O 89.5 REMARK 620 3 ASP A 110 OD1 87.2 93.1 REMARK 620 4 HOH A 326 O 173.1 84.8 89.3 REMARK 620 5 HOH A 328 O 87.5 175.2 90.4 98.5 REMARK 620 6 HOH A 339 O 94.5 93.4 173.2 89.6 83.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 17 OD2 REMARK 620 2 ASP B 19 O 88.5 REMARK 620 3 ASP B 110 OD1 88.7 90.3 REMARK 620 4 HOH B 320 O 171.3 83.0 89.2 REMARK 620 5 HOH B 321 O 94.7 175.3 93.2 93.9 REMARK 620 6 HOH B 338 O 89.0 89.5 177.7 93.0 87.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 17 OD2 REMARK 620 2 ASP C 19 O 87.2 REMARK 620 3 ASP C 110 OD1 92.0 93.0 REMARK 620 4 HOH C 301 O 174.1 88.6 84.0 REMARK 620 5 HOH C 322 O 91.6 178.7 87.6 92.6 REMARK 620 6 HOH C 348 O 93.5 95.9 169.8 91.1 83.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 17 OD2 REMARK 620 2 ASP D 19 O 86.9 REMARK 620 3 ASP D 110 OD1 85.0 90.0 REMARK 620 4 HOH D 303 O 91.5 177.7 91.5 REMARK 620 5 HOH D 321 O 168.3 85.6 86.0 96.2 REMARK 620 6 HOH D 370 O 90.9 93.8 174.3 84.5 98.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HGO RELATED DB: PDB REMARK 900 RELATED ID: 4HGP RELATED DB: PDB REMARK 900 RELATED ID: 4HGQ RELATED DB: PDB REMARK 900 RELATED ID: 4HGR RELATED DB: PDB DBREF 4HGN A 1 173 UNP Q8A748 Q8A748_BACTN 1 173 DBREF 4HGN B 1 173 UNP Q8A748 Q8A748_BACTN 1 173 DBREF 4HGN C 1 173 UNP Q8A748 Q8A748_BACTN 1 173 DBREF 4HGN D 1 173 UNP Q8A748 Q8A748_BACTN 1 173 SEQADV 4HGN GLY A -2 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN SER A -1 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN HIS A 0 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN GLY B -2 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN SER B -1 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN HIS B 0 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN GLY C -2 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN SER C -1 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN HIS C 0 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN GLY D -2 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN SER D -1 UNP Q8A748 EXPRESSION TAG SEQADV 4HGN HIS D 0 UNP Q8A748 EXPRESSION TAG SEQRES 1 A 176 GLY SER HIS MET SER THR ILE ASN TYR ASP LEU SER ARG SEQRES 2 A 176 ILE LYS ALA LEU ALA PHE ASP VAL ASP GLY VAL LEU SER SEQRES 3 A 176 SER THR THR VAL PRO LEU HIS PRO SER GLY GLU PRO MET SEQRES 4 A 176 ARG THR VAL ASN ILE LYS ASP GLY TYR ALA ILE GLN LEU SEQRES 5 A 176 ALA VAL LYS LYS GLY LEU HIS ILE ALA ILE ILE THR GLY SEQRES 6 A 176 GLY ARG THR GLU ALA VAL ARG ILE ARG PHE ALA ALA LEU SEQRES 7 A 176 GLY VAL LYS ASP LEU TYR MET GLY SER ALA VAL LYS ILE SEQRES 8 A 176 HIS ASP TYR ARG ASN PHE ARG ASP LYS TYR GLY LEU SER SEQRES 9 A 176 ASP ASP GLU ILE LEU TYR MET GLY ASP ASP VAL PRO ASP SEQRES 10 A 176 ILE GLU VAL MET ARG GLU CYS GLY LEU PRO CYS CYS PRO SEQRES 11 A 176 LYS ASP ALA VAL PRO GLU VAL LYS SER VAL ALA LYS TYR SEQRES 12 A 176 ILE SER TYR ALA ASP GLY GLY ARG GLY CYS GLY ARG ASP SEQRES 13 A 176 VAL VAL GLU GLN VAL LEU LYS ALA HIS GLY LYS TRP MET SEQRES 14 A 176 ALA GLU ASP ALA PHE GLY TRP SEQRES 1 B 176 GLY SER HIS MET SER THR ILE ASN TYR ASP LEU SER ARG SEQRES 2 B 176 ILE LYS ALA LEU ALA PHE ASP VAL ASP GLY VAL LEU SER SEQRES 3 B 176 SER THR THR VAL PRO LEU HIS PRO SER GLY GLU PRO MET SEQRES 4 B 176 ARG THR VAL ASN ILE LYS ASP GLY TYR ALA ILE GLN LEU SEQRES 5 B 176 ALA VAL LYS LYS GLY LEU HIS ILE ALA ILE ILE THR GLY SEQRES 6 B 176 GLY ARG THR GLU ALA VAL ARG ILE ARG PHE ALA ALA LEU SEQRES 7 B 176 GLY VAL LYS ASP LEU TYR MET GLY SER ALA VAL LYS ILE SEQRES 8 B 176 HIS ASP TYR ARG ASN PHE ARG ASP LYS TYR GLY LEU SER SEQRES 9 B 176 ASP ASP GLU ILE LEU TYR MET GLY ASP ASP VAL PRO ASP SEQRES 10 B 176 ILE GLU VAL MET ARG GLU CYS GLY LEU PRO CYS CYS PRO SEQRES 11 B 176 LYS ASP ALA VAL PRO GLU VAL LYS SER VAL ALA LYS TYR SEQRES 12 B 176 ILE SER TYR ALA ASP GLY GLY ARG GLY CYS GLY ARG ASP SEQRES 13 B 176 VAL VAL GLU GLN VAL LEU LYS ALA HIS GLY LYS TRP MET SEQRES 14 B 176 ALA GLU ASP ALA PHE GLY TRP SEQRES 1 C 176 GLY SER HIS MET SER THR ILE ASN TYR ASP LEU SER ARG SEQRES 2 C 176 ILE LYS ALA LEU ALA PHE ASP VAL ASP GLY VAL LEU SER SEQRES 3 C 176 SER THR THR VAL PRO LEU HIS PRO SER GLY GLU PRO MET SEQRES 4 C 176 ARG THR VAL ASN ILE LYS ASP GLY TYR ALA ILE GLN LEU SEQRES 5 C 176 ALA VAL LYS LYS GLY LEU HIS ILE ALA ILE ILE THR GLY SEQRES 6 C 176 GLY ARG THR GLU ALA VAL ARG ILE ARG PHE ALA ALA LEU SEQRES 7 C 176 GLY VAL LYS ASP LEU TYR MET GLY SER ALA VAL LYS ILE SEQRES 8 C 176 HIS ASP TYR ARG ASN PHE ARG ASP LYS TYR GLY LEU SER SEQRES 9 C 176 ASP ASP GLU ILE LEU TYR MET GLY ASP ASP VAL PRO ASP SEQRES 10 C 176 ILE GLU VAL MET ARG GLU CYS GLY LEU PRO CYS CYS PRO SEQRES 11 C 176 LYS ASP ALA VAL PRO GLU VAL LYS SER VAL ALA LYS TYR SEQRES 12 C 176 ILE SER TYR ALA ASP GLY GLY ARG GLY CYS GLY ARG ASP SEQRES 13 C 176 VAL VAL GLU GLN VAL LEU LYS ALA HIS GLY LYS TRP MET SEQRES 14 C 176 ALA GLU ASP ALA PHE GLY TRP SEQRES 1 D 176 GLY SER HIS MET SER THR ILE ASN TYR ASP LEU SER ARG SEQRES 2 D 176 ILE LYS ALA LEU ALA PHE ASP VAL ASP GLY VAL LEU SER SEQRES 3 D 176 SER THR THR VAL PRO LEU HIS PRO SER GLY GLU PRO MET SEQRES 4 D 176 ARG THR VAL ASN ILE LYS ASP GLY TYR ALA ILE GLN LEU SEQRES 5 D 176 ALA VAL LYS LYS GLY LEU HIS ILE ALA ILE ILE THR GLY SEQRES 6 D 176 GLY ARG THR GLU ALA VAL ARG ILE ARG PHE ALA ALA LEU SEQRES 7 D 176 GLY VAL LYS ASP LEU TYR MET GLY SER ALA VAL LYS ILE SEQRES 8 D 176 HIS ASP TYR ARG ASN PHE ARG ASP LYS TYR GLY LEU SER SEQRES 9 D 176 ASP ASP GLU ILE LEU TYR MET GLY ASP ASP VAL PRO ASP SEQRES 10 D 176 ILE GLU VAL MET ARG GLU CYS GLY LEU PRO CYS CYS PRO SEQRES 11 D 176 LYS ASP ALA VAL PRO GLU VAL LYS SER VAL ALA LYS TYR SEQRES 12 D 176 ILE SER TYR ALA ASP GLY GLY ARG GLY CYS GLY ARG ASP SEQRES 13 D 176 VAL VAL GLU GLN VAL LEU LYS ALA HIS GLY LYS TRP MET SEQRES 14 D 176 ALA GLU ASP ALA PHE GLY TRP HET MG A 200 1 HET MG B 201 1 HET FMT B 202 3 HET MG C 201 1 HET FMT C 202 3 HET MG D 200 1 HETNAM MG MAGNESIUM ION HETNAM FMT FORMIC ACID FORMUL 5 MG 4(MG 2+) FORMUL 7 FMT 2(C H2 O2) FORMUL 11 HOH *329(H2 O) HELIX 1 1 ASP A 7 ILE A 11 5 5 HELIX 2 2 ILE A 41 LYS A 53 1 13 HELIX 3 3 THR A 65 LEU A 75 1 11 HELIX 4 4 VAL A 86 TYR A 98 1 13 HELIX 5 5 SER A 101 ASP A 103 5 3 HELIX 6 6 ASP A 111 PRO A 113 5 3 HELIX 7 7 ASP A 114 CYS A 121 1 8 HELIX 8 8 VAL A 131 ALA A 138 1 8 HELIX 9 9 GLY A 149 HIS A 162 1 14 HELIX 10 10 ASP B 7 ILE B 11 5 5 HELIX 11 11 ILE B 41 LYS B 53 1 13 HELIX 12 12 THR B 65 LEU B 75 1 11 HELIX 13 13 VAL B 86 TYR B 98 1 13 HELIX 14 14 SER B 101 ASP B 103 5 3 HELIX 15 15 ASP B 111 PRO B 113 5 3 HELIX 16 16 ASP B 114 CYS B 121 1 8 HELIX 17 17 VAL B 131 SER B 136 1 6 HELIX 18 18 GLY B 149 HIS B 162 1 14 HELIX 19 19 ASP C 7 ILE C 11 5 5 HELIX 20 20 ILE C 41 LYS C 53 1 13 HELIX 21 21 THR C 65 ALA C 74 1 10 HELIX 22 22 VAL C 86 TYR C 98 1 13 HELIX 23 23 SER C 101 ASP C 103 5 3 HELIX 24 24 ASP C 111 PRO C 113 5 3 HELIX 25 25 ASP C 114 CYS C 121 1 8 HELIX 26 26 VAL C 131 ALA C 138 1 8 HELIX 27 27 GLY C 149 HIS C 162 1 14 HELIX 28 28 ASP D 7 ILE D 11 5 5 HELIX 29 29 ILE D 41 LYS D 53 1 13 HELIX 30 30 THR D 65 ALA D 74 1 10 HELIX 31 31 VAL D 86 TYR D 98 1 13 HELIX 32 32 SER D 101 ASP D 103 5 3 HELIX 33 33 ASP D 111 PRO D 113 5 3 HELIX 34 34 ASP D 114 CYS D 121 1 8 HELIX 35 35 VAL D 131 ALA D 138 1 8 HELIX 36 36 GLY D 149 HIS D 162 1 14 SHEET 1 A 6 ASP A 79 TYR A 81 0 SHEET 2 A 6 HIS A 56 ILE A 60 1 N ILE A 59 O TYR A 81 SHEET 3 A 6 ALA A 13 PHE A 16 1 N PHE A 16 O ILE A 60 SHEET 4 A 6 ILE A 105 MET A 108 1 O LEU A 106 N ALA A 15 SHEET 5 A 6 LEU A 123 CYS A 126 1 O CYS A 125 N TYR A 107 SHEET 6 A 6 TYR A 140 ILE A 141 1 O TYR A 140 N CYS A 126 SHEET 1 B 2 THR A 26 PRO A 28 0 SHEET 2 B 2 THR B 38 ASN B 40 -1 O VAL B 39 N VAL A 27 SHEET 1 C 2 THR A 38 ASN A 40 0 SHEET 2 C 2 THR C 26 PRO C 28 -1 O VAL C 27 N VAL A 39 SHEET 1 D 6 ASP B 79 MET B 82 0 SHEET 2 D 6 HIS B 56 THR B 61 1 N THR B 61 O TYR B 81 SHEET 3 D 6 ALA B 13 ASP B 17 1 N LEU B 14 O HIS B 56 SHEET 4 D 6 ILE B 105 MET B 108 1 O LEU B 106 N ALA B 15 SHEET 5 D 6 LEU B 123 CYS B 126 1 O CYS B 125 N TYR B 107 SHEET 6 D 6 TYR B 140 ILE B 141 1 O TYR B 140 N CYS B 126 SHEET 1 E 2 THR B 26 PRO B 28 0 SHEET 2 E 2 THR D 38 ASN D 40 -1 O VAL D 39 N VAL B 27 SHEET 1 F 6 ASP C 79 TYR C 81 0 SHEET 2 F 6 HIS C 56 ILE C 60 1 N ILE C 59 O TYR C 81 SHEET 3 F 6 ALA C 13 PHE C 16 1 N PHE C 16 O ILE C 60 SHEET 4 F 6 ILE C 105 MET C 108 1 O LEU C 106 N ALA C 15 SHEET 5 F 6 LEU C 123 CYS C 126 1 O CYS C 125 N TYR C 107 SHEET 6 F 6 TYR C 140 ILE C 141 1 O TYR C 140 N CYS C 126 SHEET 1 G 2 THR C 38 ASN C 40 0 SHEET 2 G 2 THR D 26 PRO D 28 -1 O VAL D 27 N VAL C 39 SHEET 1 H 6 ASP D 79 TYR D 81 0 SHEET 2 H 6 HIS D 56 ILE D 60 1 N ILE D 59 O TYR D 81 SHEET 3 H 6 ALA D 13 PHE D 16 1 N PHE D 16 O ILE D 60 SHEET 4 H 6 ILE D 105 MET D 108 1 O LEU D 106 N ALA D 15 SHEET 5 H 6 LEU D 123 CYS D 126 1 O CYS D 125 N TYR D 107 SHEET 6 H 6 TYR D 140 ILE D 141 1 O TYR D 140 N CYS D 126 LINK OD2 ASP A 17 MG MG A 200 1555 1555 1.98 LINK O ASP A 19 MG MG A 200 1555 1555 2.04 LINK OD1 ASP A 110 MG MG A 200 1555 1555 2.01 LINK MG MG A 200 O HOH A 326 1555 1555 2.11 LINK MG MG A 200 O HOH A 328 1555 1555 2.08 LINK MG MG A 200 O HOH A 339 1555 1555 2.08 LINK OD2 ASP B 17 MG MG B 201 1555 1555 1.97 LINK O ASP B 19 MG MG B 201 1555 1555 2.08 LINK OD1 ASP B 110 MG MG B 201 1555 1555 2.02 LINK MG MG B 201 O HOH B 320 1555 1555 2.06 LINK MG MG B 201 O HOH B 321 1555 1555 2.04 LINK MG MG B 201 O HOH B 338 1555 1555 2.03 LINK OD2 ASP C 17 MG MG C 201 1555 1555 1.90 LINK O ASP C 19 MG MG C 201 1555 1555 2.05 LINK OD1 ASP C 110 MG MG C 201 1555 1555 2.01 LINK MG MG C 201 O HOH C 301 1555 1555 2.05 LINK MG MG C 201 O HOH C 322 1555 1555 2.11 LINK MG MG C 201 O HOH C 348 1555 1555 2.06 LINK OD2 ASP D 17 MG MG D 200 1555 1555 1.94 LINK O ASP D 19 MG MG D 200 1555 1555 2.03 LINK OD1 ASP D 110 MG MG D 200 1555 1555 1.99 LINK MG MG D 200 O HOH D 303 1555 1555 2.07 LINK MG MG D 200 O HOH D 321 1555 1555 2.09 LINK MG MG D 200 O HOH D 370 1555 1555 2.05 SITE 1 AC1 6 ASP A 17 ASP A 19 ASP A 110 HOH A 326 SITE 2 AC1 6 HOH A 328 HOH A 339 SITE 1 AC2 6 ASP B 17 ASP B 19 ASP B 110 HOH B 320 SITE 2 AC2 6 HOH B 321 HOH B 338 SITE 1 AC3 4 THR B 25 THR B 26 ARG B 148 HOH D 312 SITE 1 AC4 6 ASP C 17 ASP C 19 ASP C 110 HOH C 301 SITE 2 AC4 6 HOH C 322 HOH C 348 SITE 1 AC5 4 TYR A 98 TYR C 6 ASP C 103 HOH C 356 SITE 1 AC6 6 ASP D 17 ASP D 19 ASP D 110 HOH D 303 SITE 2 AC6 6 HOH D 321 HOH D 370 CRYST1 37.522 91.198 170.067 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026651 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005880 0.00000