HEADER TRANSCRIPTION 15-OCT-12 4HKU TITLE THE CRYSTAL STRUCTURE OF TETR TRANSCRIPTIONAL REGULATOR (LMO2814) FROM TITLE 2 LISTERIA MONOCYTOGENES EGD-E COMPND MOL_ID: 1; COMPND 2 MOLECULE: TETR TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LMO2814 PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 169963; SOURCE 4 STRAIN: EGD-E; SOURCE 5 GENE: LMO2814; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PGROW7-K; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,J.C.MACK,M.ENDRES,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 2 30-OCT-24 4HKU 1 SEQADV LINK REVDAT 1 31-OCT-12 4HKU 0 JRNL AUTH K.TAN,J.C.MACK,M.ENDRES,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF TETR TRANSCRIPTIONAL REGULATOR JRNL TITL 2 (LMO2814) FROM LISTERIA MONOCYTOGENES EGD-E JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 18174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.130 REMARK 3 FREE R VALUE TEST SET COUNT : 932 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.7106 - 4.4006 0.99 2640 130 0.1665 0.2010 REMARK 3 2 4.4006 - 3.4945 1.00 2511 140 0.1791 0.2430 REMARK 3 3 3.4945 - 3.0532 0.99 2476 138 0.2155 0.2907 REMARK 3 4 3.0532 - 2.7742 0.99 2445 134 0.2398 0.3281 REMARK 3 5 2.7742 - 2.5755 0.99 2425 125 0.2318 0.3079 REMARK 3 6 2.5755 - 2.4237 0.98 2409 134 0.2313 0.3355 REMARK 3 7 2.4237 - 2.3024 0.95 2336 131 0.2236 0.2935 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.95 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 32.89 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.690 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.99450 REMARK 3 B22 (A**2) : 9.90940 REMARK 3 B33 (A**2) : -10.90390 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2950 REMARK 3 ANGLE : 0.999 4006 REMARK 3 CHIRALITY : 0.071 431 REMARK 3 PLANARITY : 0.004 509 REMARK 3 DIHEDRAL : 17.606 1052 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 2:34) REMARK 3 ORIGIN FOR THE GROUP (A): 47.1098 -20.4779 2.1351 REMARK 3 T TENSOR REMARK 3 T11: 0.2826 T22: 0.2656 REMARK 3 T33: 0.3260 T12: 0.0686 REMARK 3 T13: 0.0112 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 8.6301 L22: 4.9512 REMARK 3 L33: 4.6639 L12: -0.9850 REMARK 3 L13: -3.2173 L23: 1.6297 REMARK 3 S TENSOR REMARK 3 S11: -0.0699 S12: 0.2042 S13: -0.3582 REMARK 3 S21: 0.1991 S22: -0.0098 S23: -0.2515 REMARK 3 S31: -0.0452 S32: -0.3134 S33: 0.1180 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 35:47) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7558 -16.9903 -2.5624 REMARK 3 T TENSOR REMARK 3 T11: 0.3024 T22: 0.4791 REMARK 3 T33: 0.3021 T12: -0.0784 REMARK 3 T13: -0.0192 T23: 0.0636 REMARK 3 L TENSOR REMARK 3 L11: 7.4418 L22: 7.2240 REMARK 3 L33: 4.1524 L12: -3.2499 REMARK 3 L13: -2.3536 L23: 5.4467 REMARK 3 S TENSOR REMARK 3 S11: 0.4097 S12: 0.4846 S13: 0.2590 REMARK 3 S21: -0.0441 S22: -0.0352 S23: -0.7643 REMARK 3 S31: -0.2922 S32: 0.5343 S33: -0.4608 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 48:68) REMARK 3 ORIGIN FOR THE GROUP (A): 40.5106 -7.0225 5.5932 REMARK 3 T TENSOR REMARK 3 T11: 0.4067 T22: 0.2774 REMARK 3 T33: 0.3227 T12: 0.0338 REMARK 3 T13: 0.0391 T23: 0.0498 REMARK 3 L TENSOR REMARK 3 L11: 7.5728 L22: 6.8257 REMARK 3 L33: 4.9979 L12: -5.9902 REMARK 3 L13: -4.4753 L23: 4.7874 REMARK 3 S TENSOR REMARK 3 S11: 0.6105 S12: 0.8616 S13: 0.3680 REMARK 3 S21: -0.4170 S22: -0.6782 S23: -0.1163 REMARK 3 S31: -0.5169 S32: -0.3716 S33: 0.1156 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 69:99) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0214 1.7822 11.4807 REMARK 3 T TENSOR REMARK 3 T11: 0.3464 T22: 0.5003 REMARK 3 T33: 0.2949 T12: 0.0303 REMARK 3 T13: -0.0676 T23: -0.0814 REMARK 3 L TENSOR REMARK 3 L11: 3.9714 L22: 8.4340 REMARK 3 L33: 2.4109 L12: -3.9520 REMARK 3 L13: -1.8093 L23: 1.7883 REMARK 3 S TENSOR REMARK 3 S11: 0.2382 S12: 0.3406 S13: -0.0617 REMARK 3 S21: -0.6490 S22: -0.3957 S23: 0.6619 REMARK 3 S31: -0.3001 S32: -0.7938 S33: 0.1115 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 100:114) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9250 -11.3719 14.3946 REMARK 3 T TENSOR REMARK 3 T11: 0.4107 T22: 0.4974 REMARK 3 T33: 0.2161 T12: 0.0694 REMARK 3 T13: 0.0115 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 7.0691 L22: 9.1323 REMARK 3 L33: 3.5486 L12: -1.1184 REMARK 3 L13: -0.7513 L23: 2.3180 REMARK 3 S TENSOR REMARK 3 S11: -0.3204 S12: -0.1083 S13: -0.4012 REMARK 3 S21: 0.3577 S22: 0.0084 S23: -0.2428 REMARK 3 S31: 0.3234 S32: 0.1710 S33: 0.0773 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 115:157) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1710 4.7961 16.3301 REMARK 3 T TENSOR REMARK 3 T11: 0.3849 T22: 0.4475 REMARK 3 T33: 0.2517 T12: 0.0276 REMARK 3 T13: -0.0090 T23: -0.0903 REMARK 3 L TENSOR REMARK 3 L11: 5.1186 L22: 6.9838 REMARK 3 L33: 4.0287 L12: -3.9639 REMARK 3 L13: -0.8110 L23: 0.7252 REMARK 3 S TENSOR REMARK 3 S11: 0.0039 S12: -0.2741 S13: 0.4120 REMARK 3 S21: 0.0977 S22: 0.1563 S23: -0.5414 REMARK 3 S31: -0.1402 S32: 0.8955 S33: -0.1409 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 158:175) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7640 1.4050 24.0054 REMARK 3 T TENSOR REMARK 3 T11: 0.3478 T22: 0.5848 REMARK 3 T33: 0.2984 T12: -0.0131 REMARK 3 T13: 0.1008 T23: -0.0796 REMARK 3 L TENSOR REMARK 3 L11: 6.6871 L22: 9.1229 REMARK 3 L33: 8.3970 L12: -0.0652 REMARK 3 L13: -2.4530 L23: -1.2185 REMARK 3 S TENSOR REMARK 3 S11: -0.1214 S12: -0.1830 S13: -0.3686 REMARK 3 S21: -0.1090 S22: -0.5327 S23: 0.6773 REMARK 3 S31: 0.9130 S32: -0.5618 S33: 0.4160 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 3:47) REMARK 3 ORIGIN FOR THE GROUP (A): 47.7171 -21.1508 49.4735 REMARK 3 T TENSOR REMARK 3 T11: 0.8829 T22: 0.4959 REMARK 3 T33: 0.6854 T12: 0.3102 REMARK 3 T13: -0.0131 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 4.4714 L22: 3.1624 REMARK 3 L33: 5.8409 L12: -0.6720 REMARK 3 L13: 0.1223 L23: 1.0623 REMARK 3 S TENSOR REMARK 3 S11: 0.1040 S12: -0.1512 S13: -1.1157 REMARK 3 S21: 0.1202 S22: -0.0383 S23: -0.3413 REMARK 3 S31: 1.5796 S32: 0.7005 S33: -0.2015 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 48:77) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9126 -0.2043 45.3180 REMARK 3 T TENSOR REMARK 3 T11: 0.5391 T22: 0.5625 REMARK 3 T33: 0.2746 T12: 0.1024 REMARK 3 T13: -0.0717 T23: -0.0317 REMARK 3 L TENSOR REMARK 3 L11: 3.9819 L22: 3.4907 REMARK 3 L33: 0.7608 L12: -3.6475 REMARK 3 L13: -0.8900 L23: 0.4747 REMARK 3 S TENSOR REMARK 3 S11: -0.0007 S12: -0.1328 S13: -0.1401 REMARK 3 S21: 0.4369 S22: -0.1868 S23: -0.3410 REMARK 3 S31: 0.1016 S32: 0.3884 S33: 0.2577 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 78:175) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7057 4.0398 33.8649 REMARK 3 T TENSOR REMARK 3 T11: 0.2785 T22: 0.4260 REMARK 3 T33: 0.1661 T12: 0.0122 REMARK 3 T13: -0.0298 T23: -0.0678 REMARK 3 L TENSOR REMARK 3 L11: 3.6440 L22: 6.6878 REMARK 3 L33: 3.7346 L12: -1.9359 REMARK 3 L13: 0.1645 L23: -0.2607 REMARK 3 S TENSOR REMARK 3 S11: 0.0076 S12: -0.0716 S13: 0.0079 REMARK 3 S21: -0.1058 S22: -0.0338 S23: -0.2910 REMARK 3 S31: 0.2785 S32: 0.5988 S33: 0.0631 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926, 0.97951 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18258 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 31.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.74000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, HKL-3000, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM ACETATE, 0.1M HEPES:NAOH, REMARK 280 20%(W/V) PEG3000, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.33400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.71250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.71250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.33400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE MOLECULE IS PREDICTED TO FORM A DIMER. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MSE A 1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MSE B 1 REMARK 465 ALA B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 98 CD CE NZ REMARK 470 LYS A 119 CE NZ REMARK 470 ARG B 3 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 15 CD CE NZ REMARK 470 GLU B 23 CG CD OE1 OE2 REMARK 470 LYS B 24 CD CE NZ REMARK 470 LYS B 43 CD CE NZ REMARK 470 ARG B 46 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 49 OE1 OE2 REMARK 470 LYS B 54 CE NZ REMARK 470 LYS B 98 NZ REMARK 470 LYS B 119 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 24 OD2 ASP B 91 3745 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 37 174.28 -56.84 REMARK 500 HIS B 38 -80.49 -79.86 REMARK 500 ASN B 137 -2.34 74.08 REMARK 500 SER B 156 1.05 -65.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC106904 RELATED DB: TARGETTRACK DBREF 4HKU A 1 175 UNP Q8Y3M1 Q8Y3M1_LISMO 1 175 DBREF 4HKU B 1 175 UNP Q8Y3M1 Q8Y3M1_LISMO 1 175 SEQADV 4HKU SER A -2 UNP Q8Y3M1 EXPRESSION TAG SEQADV 4HKU ASN A -1 UNP Q8Y3M1 EXPRESSION TAG SEQADV 4HKU ALA A 0 UNP Q8Y3M1 EXPRESSION TAG SEQADV 4HKU SER B -2 UNP Q8Y3M1 EXPRESSION TAG SEQADV 4HKU ASN B -1 UNP Q8Y3M1 EXPRESSION TAG SEQADV 4HKU ALA B 0 UNP Q8Y3M1 EXPRESSION TAG SEQRES 1 A 178 SER ASN ALA MSE ALA ARG LEU SER GLN GLU ILE ILE LEU SEQRES 2 A 178 ASN MSE ALA GLU LYS ILE ILE TYR GLU LYS GLY MSE GLU SEQRES 3 A 178 LYS THR THR LEU TYR ASP ILE ALA SER ASN LEU ASN VAL SEQRES 4 A 178 THR HIS ALA ALA LEU TYR LYS HIS TYR ARG ASN LYS GLU SEQRES 5 A 178 ASP LEU PHE GLN LYS LEU ALA LEU ARG TRP LEU GLU GLU SEQRES 6 A 178 THR SER ARG GLU ILE PHE ALA TRP THR GLN ASP ALA GLY SEQRES 7 A 178 GLN THR PRO ASP ASP ALA LEU HIS ASP TRP LEU TRP LEU SEQRES 8 A 178 LEU ALA ASP THR LYS LYS LYS ARG TYR LYS THR ASP ARG SEQRES 9 A 178 LYS MSE PHE LEU LEU TYR THR ASP TYR ILE GLU GLN ASN SEQRES 10 A 178 GLU GLU LEU VAL LYS ASN HIS VAL ALA HIS LEU ALA GLN SEQRES 11 A 178 LYS ALA GLU GLU VAL SER GLY ARG THR ASN GLN GLY ASN SEQRES 12 A 178 ALA ILE ILE THR ALA PHE THR TYR PHE HIS ASN PRO TYR SEQRES 13 A 178 PHE ALA SER ARG TRP GLU GLN ALA GLY TYR VAL ASP LEU SEQRES 14 A 178 PHE GLU ASP VAL TRP GLN ILE VAL LYS SEQRES 1 B 178 SER ASN ALA MSE ALA ARG LEU SER GLN GLU ILE ILE LEU SEQRES 2 B 178 ASN MSE ALA GLU LYS ILE ILE TYR GLU LYS GLY MSE GLU SEQRES 3 B 178 LYS THR THR LEU TYR ASP ILE ALA SER ASN LEU ASN VAL SEQRES 4 B 178 THR HIS ALA ALA LEU TYR LYS HIS TYR ARG ASN LYS GLU SEQRES 5 B 178 ASP LEU PHE GLN LYS LEU ALA LEU ARG TRP LEU GLU GLU SEQRES 6 B 178 THR SER ARG GLU ILE PHE ALA TRP THR GLN ASP ALA GLY SEQRES 7 B 178 GLN THR PRO ASP ASP ALA LEU HIS ASP TRP LEU TRP LEU SEQRES 8 B 178 LEU ALA ASP THR LYS LYS LYS ARG TYR LYS THR ASP ARG SEQRES 9 B 178 LYS MSE PHE LEU LEU TYR THR ASP TYR ILE GLU GLN ASN SEQRES 10 B 178 GLU GLU LEU VAL LYS ASN HIS VAL ALA HIS LEU ALA GLN SEQRES 11 B 178 LYS ALA GLU GLU VAL SER GLY ARG THR ASN GLN GLY ASN SEQRES 12 B 178 ALA ILE ILE THR ALA PHE THR TYR PHE HIS ASN PRO TYR SEQRES 13 B 178 PHE ALA SER ARG TRP GLU GLN ALA GLY TYR VAL ASP LEU SEQRES 14 B 178 PHE GLU ASP VAL TRP GLN ILE VAL LYS MODRES 4HKU MSE A 12 MET SELENOMETHIONINE MODRES 4HKU MSE A 22 MET SELENOMETHIONINE MODRES 4HKU MSE A 103 MET SELENOMETHIONINE MODRES 4HKU MSE B 12 MET SELENOMETHIONINE MODRES 4HKU MSE B 22 MET SELENOMETHIONINE MODRES 4HKU MSE B 103 MET SELENOMETHIONINE HET MSE A 12 8 HET MSE A 22 8 HET MSE A 103 8 HET MSE B 12 8 HET MSE B 22 8 HET MSE B 103 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 3 HOH *54(H2 O) HELIX 1 1 SER A 5 GLY A 21 1 17 HELIX 2 2 MSE A 22 THR A 25 5 4 HELIX 3 3 THR A 26 LEU A 34 1 9 HELIX 4 4 THR A 37 HIS A 44 5 8 HELIX 5 5 ASN A 47 SER A 64 1 18 HELIX 6 6 SER A 64 TRP A 70 1 7 HELIX 7 7 THR A 77 ASP A 100 1 24 HELIX 8 8 ASP A 100 GLN A 113 1 14 HELIX 9 9 ASN A 114 GLY A 134 1 21 HELIX 10 10 GLN A 138 PHE A 146 1 9 HELIX 11 11 PHE A 146 ASN A 151 1 6 HELIX 12 12 PRO A 152 TRP A 158 5 7 HELIX 13 13 GLY A 162 LYS A 175 1 14 HELIX 14 14 SER B 5 THR B 25 1 21 HELIX 15 15 THR B 26 ASN B 35 1 10 HELIX 16 16 ASN B 47 TRP B 70 1 24 HELIX 17 17 THR B 77 ASP B 100 1 24 HELIX 18 18 ASP B 100 GLN B 113 1 14 HELIX 19 19 ASN B 114 GLY B 134 1 21 HELIX 20 20 GLN B 138 PHE B 146 1 9 HELIX 21 21 PHE B 146 ASN B 151 1 6 HELIX 22 22 PRO B 152 TRP B 158 5 7 HELIX 23 23 GLY B 162 LYS B 175 1 14 LINK C ASN A 11 N MSE A 12 1555 1555 1.33 LINK C MSE A 12 N ALA A 13 1555 1555 1.33 LINK C GLY A 21 N MSE A 22 1555 1555 1.33 LINK C MSE A 22 N GLU A 23 1555 1555 1.33 LINK C LYS A 102 N MSE A 103 1555 1555 1.33 LINK C MSE A 103 N PHE A 104 1555 1555 1.32 LINK C ASN B 11 N MSE B 12 1555 1555 1.33 LINK C MSE B 12 N ALA B 13 1555 1555 1.33 LINK C GLY B 21 N MSE B 22 1555 1555 1.33 LINK C MSE B 22 N GLU B 23 1555 1555 1.33 LINK C LYS B 102 N MSE B 103 1555 1555 1.33 LINK C MSE B 103 N PHE B 104 1555 1555 1.33 CRYST1 46.668 81.560 105.425 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021428 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012261 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009485 0.00000