HEADER IMMUNE SYSTEM 15-OCT-12 4HKZ TITLE TRASTUZUMAB FAB COMPLEXED WITH PROTEIN L AND PROTEIN A FRAGMENTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRASTUZUMAB LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TRASTUZUMAB HEAVY CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: IMMUNOGLOBULIN G-BINDING PROTEIN A; COMPND 11 CHAIN: H; COMPND 12 SYNONYM: IGG-BINDING PROTEIN A, STAPHYLOCOCCAL PROTEIN A; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: PROTEIN L FRAGMENT; COMPND 16 CHAIN: E; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 13 ORGANISM_TAXID: 158878; SOURCE 14 STRAIN: MU50 / ATCC 700699; SOURCE 15 GENE: SPA, SAV0111; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: FINEGOLDIA MAGNA; SOURCE 20 ORGANISM_TAXID: 1260; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MONOCLONAL ANTIBODY, IMMUNE SYSTEM, CANCER THERAPEUTIC EXPDTA X-RAY DIFFRACTION AUTHOR K.N.AVERY,C.ZER,K.P.BZYMEK,J.C.WILLIAMS REVDAT 4 15-NOV-17 4HKZ 1 REMARK REVDAT 3 06-NOV-13 4HKZ 1 JRNL REVDAT 2 23-OCT-13 4HKZ 1 JRNL REVDAT 1 09-OCT-13 4HKZ 0 JRNL AUTH J.M.DONALDSON,C.ZER,K.N.AVERY,K.P.BZYMEK,D.A.HORNE, JRNL AUTH 2 J.C.WILLIAMS JRNL TITL IDENTIFICATION AND GRAFTING OF A UNIQUE PEPTIDE-BINDING SITE JRNL TITL 2 IN THE FAB FRAMEWORK OF MONOCLONAL ANTIBODIES. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 17456 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 24101516 JRNL DOI 10.1073/PNAS.1307309110 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 40076 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2003 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.8233 - 5.0113 0.99 2927 155 0.1625 0.2039 REMARK 3 2 5.0113 - 3.9782 1.00 2813 148 0.1162 0.1434 REMARK 3 3 3.9782 - 3.4755 1.00 2747 144 0.1399 0.1754 REMARK 3 4 3.4755 - 3.1578 1.00 2731 144 0.1530 0.1934 REMARK 3 5 3.1578 - 2.9315 1.00 2751 145 0.1737 0.2158 REMARK 3 6 2.9315 - 2.7587 1.00 2740 144 0.1763 0.2212 REMARK 3 7 2.7587 - 2.6205 0.99 2709 142 0.1808 0.2485 REMARK 3 8 2.6205 - 2.5065 1.00 2712 143 0.1842 0.2546 REMARK 3 9 2.5065 - 2.4100 1.00 2703 143 0.1884 0.2717 REMARK 3 10 2.4100 - 2.3268 1.00 2721 143 0.1872 0.2234 REMARK 3 11 2.3268 - 2.2541 1.00 2701 142 0.1923 0.2666 REMARK 3 12 2.2541 - 2.1896 1.00 2688 140 0.1994 0.2442 REMARK 3 13 2.1896 - 2.1320 0.98 2645 140 0.2026 0.2556 REMARK 3 14 2.1320 - 2.0800 0.92 2485 130 0.2207 0.2626 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4422 REMARK 3 ANGLE : 1.066 6030 REMARK 3 CHIRALITY : 0.078 674 REMARK 3 PLANARITY : 0.005 787 REMARK 3 DIHEDRAL : 13.459 1628 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:113) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7556 -30.5278 11.3986 REMARK 3 T TENSOR REMARK 3 T11: 0.0654 T22: 0.1241 REMARK 3 T33: 0.1305 T12: 0.0264 REMARK 3 T13: 0.0053 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.5262 L22: 1.4730 REMARK 3 L33: 3.1794 L12: 0.6263 REMARK 3 L13: -0.6339 L23: -1.4221 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: 0.0197 S13: -0.0711 REMARK 3 S21: 0.0463 S22: -0.0139 S23: -0.0242 REMARK 3 S31: 0.0710 S32: 0.1150 S33: 0.0131 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 114:213) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8511 -27.8818 42.3286 REMARK 3 T TENSOR REMARK 3 T11: 0.3328 T22: 0.2339 REMARK 3 T33: 0.2184 T12: 0.0288 REMARK 3 T13: 0.0969 T23: 0.0621 REMARK 3 L TENSOR REMARK 3 L11: 1.8352 L22: 4.1076 REMARK 3 L33: 3.1121 L12: -1.4327 REMARK 3 L13: -0.7740 L23: 0.6322 REMARK 3 S TENSOR REMARK 3 S11: 0.0777 S12: -0.1152 S13: 0.1129 REMARK 3 S21: 0.4466 S22: 0.2091 S23: 0.5077 REMARK 3 S31: -0.4153 S32: -0.3402 S33: -0.2602 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 1:17) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6491 -4.8008 18.3059 REMARK 3 T TENSOR REMARK 3 T11: 0.2293 T22: 0.0661 REMARK 3 T33: 0.1484 T12: 0.0066 REMARK 3 T13: -0.0174 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 9.8860 L22: 1.1216 REMARK 3 L33: 3.8454 L12: 1.2728 REMARK 3 L13: -2.3147 L23: 0.6764 REMARK 3 S TENSOR REMARK 3 S11: -0.4980 S12: -1.1027 S13: -0.2284 REMARK 3 S21: 0.5656 S22: 0.4003 S23: -0.0570 REMARK 3 S31: -0.1583 S32: 0.1590 S33: 0.1451 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 18:32) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5537 -4.0041 11.1736 REMARK 3 T TENSOR REMARK 3 T11: 0.1525 T22: 0.1087 REMARK 3 T33: 0.1900 T12: -0.0701 REMARK 3 T13: -0.0061 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 4.7940 L22: 5.1778 REMARK 3 L33: 3.2415 L12: -4.7735 REMARK 3 L13: -1.6491 L23: 2.7744 REMARK 3 S TENSOR REMARK 3 S11: 0.0363 S12: -0.1835 S13: 0.2610 REMARK 3 S21: 0.0222 S22: 0.0868 S23: -0.2998 REMARK 3 S31: -0.2855 S32: 0.3645 S33: -0.1542 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND (RESID 33:83) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5571 -6.9622 6.3592 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.0998 REMARK 3 T33: 0.0882 T12: 0.0174 REMARK 3 T13: -0.0016 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 2.6492 L22: 3.7082 REMARK 3 L33: 3.4983 L12: -0.7469 REMARK 3 L13: -0.8549 L23: -0.7327 REMARK 3 S TENSOR REMARK 3 S11: 0.0364 S12: 0.1191 S13: 0.0838 REMARK 3 S21: -0.1121 S22: -0.0511 S23: 0.0443 REMARK 3 S31: -0.1830 S32: -0.0461 S33: 0.0264 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND (RESID 84:99) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0292 -9.5131 12.2132 REMARK 3 T TENSOR REMARK 3 T11: 0.0942 T22: 0.1052 REMARK 3 T33: 0.1312 T12: -0.0215 REMARK 3 T13: -0.0102 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.9162 L22: 4.4033 REMARK 3 L33: 2.7653 L12: -2.5897 REMARK 3 L13: -1.3448 L23: 0.3660 REMARK 3 S TENSOR REMARK 3 S11: -0.1217 S12: 0.1482 S13: -0.3259 REMARK 3 S21: 0.2231 S22: 0.0627 S23: 0.4448 REMARK 3 S31: -0.0352 S32: -0.1247 S33: 0.0619 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND (RESID 100:195) REMARK 3 ORIGIN FOR THE GROUP (A): -21.6064 -16.5549 34.0382 REMARK 3 T TENSOR REMARK 3 T11: 0.3681 T22: 0.1485 REMARK 3 T33: 0.1925 T12: -0.0089 REMARK 3 T13: -0.0038 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.2636 L22: 1.1613 REMARK 3 L33: 3.2475 L12: 0.4438 REMARK 3 L13: -0.2953 L23: -1.3979 REMARK 3 S TENSOR REMARK 3 S11: 0.0928 S12: -0.1243 S13: -0.0229 REMARK 3 S21: 0.5328 S22: -0.0113 S23: -0.0200 REMARK 3 S31: -0.4388 S32: -0.0260 S33: -0.0723 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND (RESID 196:221) REMARK 3 ORIGIN FOR THE GROUP (A): -18.8610 -11.3331 44.8992 REMARK 3 T TENSOR REMARK 3 T11: 0.7907 T22: 0.2527 REMARK 3 T33: 0.2395 T12: -0.0964 REMARK 3 T13: -0.1152 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 3.3292 L22: 1.1941 REMARK 3 L33: 5.5837 L12: -1.9767 REMARK 3 L13: 2.6686 L23: -1.8714 REMARK 3 S TENSOR REMARK 3 S11: 0.0886 S12: -0.2210 S13: 0.4123 REMARK 3 S21: 1.1306 S22: -0.1941 S23: -0.5256 REMARK 3 S31: -0.7204 S32: 0.0484 S33: 0.1813 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN H AND (RESID 1:10) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0872 13.0480 -4.4108 REMARK 3 T TENSOR REMARK 3 T11: 0.8240 T22: 0.9347 REMARK 3 T33: 0.5126 T12: 0.3237 REMARK 3 T13: 0.0668 T23: 0.1215 REMARK 3 L TENSOR REMARK 3 L11: 6.2526 L22: 2.2252 REMARK 3 L33: 1.0816 L12: 2.5404 REMARK 3 L13: 0.9941 L23: 0.4442 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: 1.7827 S13: 0.1017 REMARK 3 S21: -1.0165 S22: -0.3471 S23: -0.4611 REMARK 3 S31: -0.6272 S32: 0.8467 S33: 0.2715 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN H AND (RESID 11:15) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4939 13.5393 1.1412 REMARK 3 T TENSOR REMARK 3 T11: 0.5381 T22: 0.3065 REMARK 3 T33: 0.2389 T12: 0.1085 REMARK 3 T13: 0.0099 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 2.0016 L22: 7.9245 REMARK 3 L33: 7.8757 L12: -0.2608 REMARK 3 L13: -7.4776 L23: 3.5226 REMARK 3 S TENSOR REMARK 3 S11: -0.0885 S12: 1.1402 S13: 0.5830 REMARK 3 S21: -1.6149 S22: -0.7377 S23: -0.4126 REMARK 3 S31: 0.1872 S32: 0.3530 S33: 0.7449 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN H AND (RESID 16:30) REMARK 3 ORIGIN FOR THE GROUP (A): -31.2183 9.7792 8.9310 REMARK 3 T TENSOR REMARK 3 T11: 0.2641 T22: 0.1281 REMARK 3 T33: 0.1522 T12: 0.0587 REMARK 3 T13: -0.0257 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 5.8175 L22: 2.1468 REMARK 3 L33: 2.6562 L12: -2.0393 REMARK 3 L13: 0.0190 L23: -0.3081 REMARK 3 S TENSOR REMARK 3 S11: 0.1214 S12: 0.1653 S13: 0.1280 REMARK 3 S21: -0.2286 S22: -0.1935 S23: 0.2665 REMARK 3 S31: -0.4675 S32: -0.2232 S33: 0.0374 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN H AND (RESID 31:45) REMARK 3 ORIGIN FOR THE GROUP (A): -24.7449 3.0486 0.2564 REMARK 3 T TENSOR REMARK 3 T11: 0.3061 T22: 0.1952 REMARK 3 T33: 0.1509 T12: 0.0648 REMARK 3 T13: -0.0121 T23: 0.0084 REMARK 3 L TENSOR REMARK 3 L11: 2.0131 L22: 2.8509 REMARK 3 L33: 5.2767 L12: -0.2246 REMARK 3 L13: 1.9778 L23: 0.3197 REMARK 3 S TENSOR REMARK 3 S11: -0.0521 S12: 0.6669 S13: 0.3750 REMARK 3 S21: -0.7598 S22: -0.2342 S23: 0.0849 REMARK 3 S31: -0.2358 S32: 0.0873 S33: 0.2814 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN H AND (RESID 46:54) REMARK 3 ORIGIN FOR THE GROUP (A): -39.1177 4.5301 4.7835 REMARK 3 T TENSOR REMARK 3 T11: 0.2453 T22: 0.3165 REMARK 3 T33: 0.3706 T12: 0.0912 REMARK 3 T13: -0.1296 T23: -0.1072 REMARK 3 L TENSOR REMARK 3 L11: 9.1933 L22: 3.5433 REMARK 3 L33: 9.1918 L12: 0.8573 REMARK 3 L13: -7.5409 L23: -1.0872 REMARK 3 S TENSOR REMARK 3 S11: 0.4930 S12: 0.5070 S13: -0.3642 REMARK 3 S21: -0.8058 S22: -0.2744 S23: 1.0787 REMARK 3 S31: -0.0705 S32: -1.0172 S33: -0.2338 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN E AND (RESID 19:33) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9964 -43.8883 15.2841 REMARK 3 T TENSOR REMARK 3 T11: 0.2674 T22: 0.1639 REMARK 3 T33: 0.2683 T12: -0.0515 REMARK 3 T13: -0.0541 T23: 0.0102 REMARK 3 L TENSOR REMARK 3 L11: 7.6027 L22: 8.6840 REMARK 3 L33: 5.7061 L12: -5.5132 REMARK 3 L13: 1.9142 L23: -1.3111 REMARK 3 S TENSOR REMARK 3 S11: -0.1732 S12: -0.5945 S13: -0.1648 REMARK 3 S21: 0.6552 S22: 0.3620 S23: -0.2262 REMARK 3 S31: 0.3424 S32: -0.1959 S33: -0.1720 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN E AND (RESID 34:61) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6501 -41.1576 8.3428 REMARK 3 T TENSOR REMARK 3 T11: 0.0967 T22: 0.1332 REMARK 3 T33: 0.1946 T12: -0.0274 REMARK 3 T13: 0.0094 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 7.0262 L22: 4.3814 REMARK 3 L33: 5.5888 L12: -2.0499 REMARK 3 L13: 4.5992 L23: -1.1648 REMARK 3 S TENSOR REMARK 3 S11: 0.2763 S12: 0.3309 S13: -0.2670 REMARK 3 S21: -0.1707 S22: -0.0868 S23: 0.1901 REMARK 3 S31: 0.3355 S32: 0.0721 S33: -0.1294 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN E AND (RESID 62:81) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7680 -50.0598 11.2964 REMARK 3 T TENSOR REMARK 3 T11: 0.4936 T22: 0.2524 REMARK 3 T33: 0.4445 T12: -0.1002 REMARK 3 T13: -0.1511 T23: -0.0323 REMARK 3 L TENSOR REMARK 3 L11: 9.1859 L22: 9.9417 REMARK 3 L33: 8.6978 L12: -7.1357 REMARK 3 L13: -1.1141 L23: 0.4563 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: 0.0114 S13: -1.2352 REMARK 3 S21: 0.5664 S22: 0.2875 S23: 0.3484 REMARK 3 S31: 1.3099 S32: -0.5168 S33: -0.3306 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HKZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075596. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40077 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 47.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.39500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM HEPES, 20% PEG 3350, 100 MM REMARK 280 NACL, PH 7.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.76000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.77500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.77500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.76000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 188 CG CD CE NZ REMARK 470 LYS B 221 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 496 O HOH A 503 1.95 REMARK 500 O HOH A 458 O HOH A 464 2.00 REMARK 500 O HOH A 467 O HOH B 597 2.02 REMARK 500 O HOH E 126 O HOH E 135 2.04 REMARK 500 O HOH A 464 O HOH A 504 2.05 REMARK 500 OE1 GLU E 45 O HOH E 133 2.05 REMARK 500 OE1 GLU E 63 O HOH E 111 2.09 REMARK 500 OE1 GLU H 51 O HOH H 138 2.09 REMARK 500 O HOH A 354 O HOH A 438 2.10 REMARK 500 O HOH A 408 O HOH A 449 2.12 REMARK 500 O HOH B 548 O HOH B 552 2.13 REMARK 500 OG1 THR A 129 O HOH A 495 2.13 REMARK 500 O HOH A 465 O HOH A 470 2.15 REMARK 500 O HOH B 631 O HOH B 636 2.15 REMARK 500 OE1 GLU A 165 O HOH A 511 2.16 REMARK 500 NH1 ARG A 18 O HOH A 512 2.16 REMARK 500 O HOH A 454 O HOH A 460 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 30 -123.44 51.73 REMARK 500 ALA A 51 -40.57 72.57 REMARK 500 ASP B 151 63.32 62.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HJG RELATED DB: PDB REMARK 900 RELATED ID: 1N8Z RELATED DB: PDB DBREF 4HKZ H 4 54 UNP P0A015 SPA_STAAM 101 151 DBREF 4HKZ A 1 213 PDB 4HKZ 4HKZ 1 213 DBREF 4HKZ B 1 221 PDB 4HKZ 4HKZ 1 221 DBREF 4HKZ E 19 81 PDB 4HKZ 4HKZ 19 81 SEQADV 4HKZ GLY H 1 UNP P0A015 EXPRESSION TAG SEQADV 4HKZ SER H 2 UNP P0A015 EXPRESSION TAG SEQADV 4HKZ TYR H 3 UNP P0A015 EXPRESSION TAG SEQRES 1 A 213 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 A 213 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 A 213 GLN ASP VAL ASN THR ALA VAL ALA TRP TYR GLN GLN LYS SEQRES 4 A 213 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR SER ALA SER SEQRES 5 A 213 PHE LEU TYR SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 A 213 ARG SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 A 213 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN HIS SEQRES 8 A 213 TYR THR THR PRO PRO THR PHE GLY GLN GLY THR LYS VAL SEQRES 9 A 213 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 A 213 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 A 213 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 A 213 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 A 213 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 A 213 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 A 213 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 A 213 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 A 213 PHE ASN ARG GLY GLU SEQRES 1 B 221 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 B 221 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 221 PHE ASN ILE LYS ASP THR TYR ILE HIS TRP VAL ARG GLN SEQRES 4 B 221 ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA ARG ILE TYR SEQRES 5 B 221 PRO THR ASN GLY TYR THR ARG TYR ALA ASP SER VAL LYS SEQRES 6 B 221 GLY ARG PHE THR ILE SER ALA ASP THR SER LYS ASN THR SEQRES 7 B 221 ALA TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 B 221 ALA VAL TYR TYR CYS SER ARG TRP GLY GLY ASP GLY PHE SEQRES 9 B 221 TYR ALA MET ASP TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 B 221 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 B 221 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 B 221 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 B 221 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 B 221 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 B 221 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 B 221 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 B 221 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 1 H 54 GLY SER TYR ASN LYS ASP GLN GLN SER ALA PHE TYR GLU SEQRES 2 H 54 ILE LEU ASN MET PRO ASN LEU ASN GLU ALA GLN ARG ASN SEQRES 3 H 54 GLY PHE ILE GLN SER LEU LYS ASP ASP PRO SER GLN SER SEQRES 4 H 54 THR ASN VAL LEU GLY GLU ALA LYS LYS LEU ASN GLU SER SEQRES 5 H 54 GLN ALA SEQRES 1 E 63 SER GLU VAL THR ILE LYS VAL ASN LEU ILE PHE ALA ASP SEQRES 2 E 63 GLY LYS ILE GLN THR ALA GLU PHE LYS GLY THR PHE GLU SEQRES 3 E 63 GLU ALA THR ALA GLU ALA TYR ARG TYR ALA ALA LEU LEU SEQRES 4 E 63 ALA LYS VAL ASN GLY GLU TYR THR ALA ASP LEU GLU ASP SEQRES 5 E 63 GLY GLY ASN HIS MET ASN ILE LYS PHE ALA GLY HET CL B 301 1 HETNAM CL CHLORIDE ION FORMUL 5 CL CL 1- FORMUL 6 HOH *557(H2 O) HELIX 1 1 GLN A 79 PHE A 83 5 5 HELIX 2 2 SER A 121 SER A 127 1 7 HELIX 3 3 LYS A 183 LYS A 188 1 6 HELIX 4 4 ASN B 28 THR B 32 5 5 HELIX 5 5 ARG B 87 THR B 91 5 5 HELIX 6 6 GLY B 100 PHE B 104 5 5 HELIX 7 7 SER B 163 ALA B 165 5 3 HELIX 8 8 SER B 194 LEU B 196 5 3 HELIX 9 9 LYS B 208 ASN B 211 5 4 HELIX 10 10 ASN H 4 ASN H 16 1 13 HELIX 11 11 ASN H 21 ASP H 35 1 15 HELIX 12 12 GLN H 38 GLN H 53 1 16 HELIX 13 13 THR E 42 GLY E 62 1 21 HELIX 14 14 ASP E 70 GLY E 72 5 3 SHEET 1 A 4 MET A 4 SER A 7 0 SHEET 2 A 4 VAL A 19 ALA A 25 -1 O THR A 22 N SER A 7 SHEET 3 A 4 ASP A 70 ILE A 75 -1 O PHE A 71 N CYS A 23 SHEET 4 A 4 PHE A 62 SER A 67 -1 N SER A 63 O THR A 74 SHEET 1 B 5 PHE A 53 LEU A 54 0 SHEET 2 B 5 LYS A 45 TYR A 49 -1 N TYR A 49 O PHE A 53 SHEET 3 B 5 VAL A 33 GLN A 38 -1 N TRP A 35 O ILE A 48 SHEET 4 B 5 ALA A 84 GLN A 90 -1 O THR A 85 N GLN A 38 SHEET 5 B 5 THR A 97 PHE A 98 -1 O THR A 97 N GLN A 90 SHEET 1 C10 PHE A 53 LEU A 54 0 SHEET 2 C10 LYS A 45 TYR A 49 -1 N TYR A 49 O PHE A 53 SHEET 3 C10 VAL A 33 GLN A 38 -1 N TRP A 35 O ILE A 48 SHEET 4 C10 ALA A 84 GLN A 90 -1 O THR A 85 N GLN A 38 SHEET 5 C10 THR A 102 LYS A 107 -1 O VAL A 104 N ALA A 84 SHEET 6 C10 SER A 10 SER A 14 1 N ALA A 13 O LYS A 107 SHEET 7 C10 ILE E 34 GLY E 41 -1 O THR E 36 N SER A 12 SHEET 8 C10 VAL E 21 ILE E 28 -1 N LEU E 27 O GLN E 35 SHEET 9 C10 HIS E 74 PHE E 79 1 O ILE E 77 N ILE E 28 SHEET 10 C10 TYR E 64 GLU E 69 -1 N GLU E 69 O HIS E 74 SHEET 1 D 4 SER A 114 PHE A 118 0 SHEET 2 D 4 THR A 129 PHE A 139 -1 O ASN A 137 N SER A 114 SHEET 3 D 4 TYR A 173 SER A 182 -1 O LEU A 179 N VAL A 132 SHEET 4 D 4 SER A 159 VAL A 163 -1 N GLN A 160 O THR A 178 SHEET 1 E 4 ALA A 153 LEU A 154 0 SHEET 2 E 4 LYS A 145 VAL A 150 -1 N VAL A 150 O ALA A 153 SHEET 3 E 4 VAL A 191 THR A 197 -1 O GLU A 195 N GLN A 147 SHEET 4 E 4 VAL A 205 ASN A 210 -1 O VAL A 205 N VAL A 196 SHEET 1 F 4 GLN B 3 SER B 7 0 SHEET 2 F 4 LEU B 18 SER B 25 -1 O ALA B 23 N VAL B 5 SHEET 3 F 4 THR B 78 MET B 83 -1 O MET B 83 N LEU B 18 SHEET 4 F 4 PHE B 68 ASP B 73 -1 N ASP B 73 O THR B 78 SHEET 1 G 6 LEU B 11 VAL B 12 0 SHEET 2 G 6 THR B 114 VAL B 118 1 O THR B 117 N VAL B 12 SHEET 3 G 6 ALA B 92 TRP B 99 -1 N ALA B 92 O VAL B 116 SHEET 4 G 6 TYR B 33 GLN B 39 -1 N VAL B 37 O TYR B 95 SHEET 5 G 6 LEU B 45 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 G 6 THR B 58 TYR B 60 -1 O ARG B 59 N ARG B 50 SHEET 1 H 4 LEU B 11 VAL B 12 0 SHEET 2 H 4 THR B 114 VAL B 118 1 O THR B 117 N VAL B 12 SHEET 3 H 4 ALA B 92 TRP B 99 -1 N ALA B 92 O VAL B 116 SHEET 4 H 4 TYR B 109 TRP B 110 -1 O TYR B 109 N ARG B 98 SHEET 1 I 4 SER B 127 LEU B 131 0 SHEET 2 I 4 THR B 142 TYR B 152 -1 O LEU B 148 N PHE B 129 SHEET 3 I 4 TYR B 183 PRO B 192 -1 O LEU B 185 N VAL B 149 SHEET 4 I 4 VAL B 170 THR B 172 -1 N HIS B 171 O VAL B 188 SHEET 1 J 4 THR B 138 SER B 139 0 SHEET 2 J 4 THR B 142 TYR B 152 -1 O THR B 142 N SER B 139 SHEET 3 J 4 TYR B 183 PRO B 192 -1 O LEU B 185 N VAL B 149 SHEET 4 J 4 VAL B 176 LEU B 177 -1 N VAL B 176 O SER B 184 SHEET 1 K 3 THR B 158 TRP B 161 0 SHEET 2 K 3 ILE B 202 HIS B 207 -1 O ASN B 204 N SER B 160 SHEET 3 K 3 THR B 212 LYS B 217 -1 O THR B 212 N HIS B 207 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.07 SSBOND 2 CYS A 134 CYS A 194 1555 1555 2.04 SSBOND 3 CYS B 22 CYS B 96 1555 1555 2.04 SSBOND 4 CYS B 147 CYS B 203 1555 1555 2.04 CISPEP 1 SER A 7 PRO A 8 0 -10.20 CISPEP 2 THR A 94 PRO A 95 0 1.59 CISPEP 3 TYR A 140 PRO A 141 0 3.51 CISPEP 4 PHE B 153 PRO B 154 0 -5.70 CISPEP 5 GLU B 155 PRO B 156 0 -1.02 SITE 1 AC1 3 ARG B 59 TYR B 60 LYS B 65 CRYST1 53.520 104.670 117.550 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009554 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008507 0.00000